Pregenerated sensors for ZFP456 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078995Ensembl transcript IDs: ENSMUST00000057070.9, ENSMUST00000172266.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACATTTCAGGTCCTGGTGCCCATAAGCCTCTGATTATAACACAATaGAGAATGCATTTTGTCCATCTTGAAAACTCTCCACAGTCTATC | + |
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Preference number: 1 (lower is better) Translates to: HISGPGAHKPLIITQ*RMHFVHLENSPQSI Trigger: GATAGACTGTGGAGAGTTTTCAAGATGGACAAAATGCATTCTCCATTGTGTTATAATCAGAGGCTTATGGGCACCAGGACCTGAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR GCA 90 bp | CTGCTTTATGCCTGTAGGTACAGAAGAAAGAAATGCAACAACCCATaGCATATTCAAGCACACTATAGAACACATTGGTTGGGAGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LLYACRYRRKKCNNP*HIQAHYRTHWLGGY Trigger: ATAACCTCCCAACCAATGTGTTCTATAGTGTGCTTGAATATGGCATGGGTTGTTGCATTTCTTTCTTCTGTACCTACAGGCATAAAGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 90 bp | ACTACCAATGAGGCTACACCTTCACCAATACTCCTTTTTATCATCTaGTTAACATCACCAGTTATTAGTTACTGTCCATGGAATGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: TTNEATPSPILLFII*LTSPVISYCPWNEL Trigger: AAGCTCATTCCATGGACAGTAACTAATAACTGGTGATGTTAATCAGATGATAAAAAGGAGTATTGGTGAAGGTGTAGCCTCATTGGTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR GCA 90 bp | ATAATAACAGTTCTGCTTTATGCCTGTAGGTACAGAAGAAAGAAATaGAACAACCCATGCCATATTCAAGCACACTATAGAACACATTGG | + |
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Preference number: 1 (lower is better) Translates to: IITVLLYACRYRRKK*NNPCHIQAHYRTHW Trigger: CCAATGTGTTCTATAGTGTGCTTGAATATGGCATGGGTTGTTGCATTTCTTTCTTCTGTACCTACAGGCATAAAGCAGAACTGTTATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 90 bp | CCATCTCAACAGTGTTTAAAAGCAAAGTTCAAAGTCTACAACATTTaGGATCCACAATCAGGACTCCTCCAAAGGAATAGTTTCAATTCT | + |
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Preference number: 1 (lower is better) Translates to: PSQQCLKAKFKVYNI*DPQSGLLQRNSFNS Trigger: AGAATTGAAACTATTCCTTTGGAGGAGTCCTGATTGTGGATCCCAAATGTTGTAGACTTTGAACTTTGCTTTTAAACACTGTTGAGATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR GCA 90 bp | TATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGGTTGTCCTGCCGTCTAAATGCAACAACCCATaGCATATTCAAGCACACTAT | + |
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Preference number: 2 (lower is better) Translates to: YFLSQRSGTLEPGVVLPSKCNNP*HIQAHY Trigger: ATAGTGTGCTTGAATATGGCATGGGTTGTTGCATTT...AGACGGCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCTGGGACAGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CAA 90 bp | ACTCCCATAACTTTGCTGTCCCTATTGCTCCACTGGCACTTCAATTaGCCTGACCATTTATTCTACTCCCTGTGTTCACTGCTGGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: TPITLLSLLLHWHFN*PDHLFYSLCSLLGK Trigger: CTTACCCAGCAGTGAACACAGGGAGTAGAATAAATGGTCAGGCAAATTGAAGTGCCAGTGGAGCAATAGGGACAGCAAAGTTATGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAATGCACTGGGGTTTTCCATTGCAACTAGGCTGTAATTTCACCAATCACCTGAGTAAGTGCATGTaGCTTGGGTCCATGTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SSMHWGFPLQLGCNFTNHLSKCM*LGSMFQ Trigger: TTGAAACATGGACCCAAGCCACATGCACTTACTCAG...GTGATTGGTGAAATTACAGCCTAGTTGCAATGGAAAACCCCAGTGCATTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGCATACCTAGATTGTGCCACCAATATGAAAGGTAGCCAGCAGACAGCAAGCTACAGAAGAAAGAAATaGAACAACCCATGCCATATT | + |
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Preference number: 2 (lower is better) Translates to: VAYLDCATNMKGSQQTASYRRKK*NNPCHI Trigger: AATATGGCATGGGTTGTTGCATTTCTTTCTTCTGTA...GCTTGCTGTCTGCTGGCTACCTTTCATATTGGTGGCACAATCTAGGTATGCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCATGTTATGGTATGTGGCTCACATGCAATTTACTCTGATAGGGTCTATTACAGTAACTATAAAATaGCCCAGATCTCAGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: LSMLWYVAHMQFTLIGSITVTIK*PRSQAH Trigger: GTGCGCCTGAGATCTGGGCCATTTTATAGTTACTGT...AATAGACCCTATCAGAGTAAATTGCATGTGAGCCACATACCATAACATGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CCA 90 bp | AACAACCAGTTAATTCATCAGAGCCCAGTTGTAAGATCCGATGGAGCAAAACAGGCATGTTATGGTATGTaGCTCACATGCAATTTACTC | + |
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Preference number: 2 (lower is better) Translates to: NNQLIHQSPVVRSDGAKQACYGM*LTCNLL Trigger: GAGTAAATTGCATGTGAGCCACATACCATAACATGC...CTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAACTGGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAATGCACTGGGGTTTTCCATTGCAACTAGGCTGTAATTTCACCAATCACGTCCATGTTTCAATTTaGTGTCAAGTTTCTATGACA | + |
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Preference number: 2 (lower is better) Translates to: SSMHWGFPLQLGCNFTNHVHVSI*CQVSMT Trigger: TGTCATAGAAACTTGACAGCAAATTGAAACATGGAC...GTGATTGGTGAAATTACAGCCTAGTTGCAATGGAAAACCCCAGTGCATTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCTGCTTTATGCCTGTAGGTACAGAAGAAAGAAATGCAACAACCCATGCCACTATAGAACACATTaGTTGGGAGGTTATAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TVLLYACRYRRKKCNNPCHYRTH*LGGYSK Trigger: TTTACTATAACCTCCCAACCAATGTGTTCTATAGTG...GCATGGGTTGTTGCATTTCTTTCTTCTGTACCTACAGGCATAAAGCAGAACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR TCA 90 bp | GTTACTGTCCATGGAATGAGCTTTAAATTCAACCAGAAAATAATTGGTCACTCCGCTGTCAAGTTTCTATaGCATGAAAGTTGGAATAAG | + |
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Preference number: 2 (lower is better) Translates to: VTVHGMSFKFNQKIIGHSAVKFL*HESWNK Trigger: CTTATTCCAACTTTCATGTCATAGAAACTTGACAGC...GGAGTGACCAATTATTTTCTGGTTGAATTTAAAGCTCATTCCATGGACAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR TCA 90 bp | GTTACTGTCCATGGAATGAGCTTTAAATTCAACCAGAAAATAATTGGTCACTCCCTACACTATATTTCATaGCTGACATCACATATGCAC | + |
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Preference number: 2 (lower is better) Translates to: VTVHGMSFKFNQKIIGHSLHYIS*LTSHMH Trigger: GTGCATATGTGATGTCAGTCATGAAATATAGTGTAG...GGAGTGACCAATTATTTTCTGGTTGAATTTAAAGCTCATTCCATGGACAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | GCTCCAGAGGGTATGGGGTACAGTGTCAGGATAACCTaGCCTGGCCTAAGTCACCTTATTCCCCAGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: APEGMGYSVRIT*PGLSHLIPQFY Trigger: ATAGAACTGGGGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTGACACTGTACCCCATACCCTCTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR GCA 72 bp | CTTTGCTGTCCCTATTGCTCCACTGGCACTTCAATTTaGCTGACCATTTATTCTACTCCCTGTGTTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: LCCPYCSTGTSI*LTIYSTPCVHC Trigger: GCAGTGAACACAGGGAGTAGAATAAATGGTCAGGCAAATTGAAGTGCCAGTGGAGCAATAGGGACAGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CAA 90 bp | GTTACTGTCCATGGAATGAGCTTTAAATTCAACCAGAAAATAATTGGTCACTCCAGAGGAGTGGTACTCTaGAGCCTGGGGTTGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: VTVHGMSFKFNQKIIGHSRGVVL*SLGLSC Trigger: GCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCT...GGAGTGACCAATTATTTTCTGGTTGAATTTAAAGCTCATTCCATGGACAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | GTCACTCCCATAACTTTGCTGTCCCTATTGCTCCACTaGCACTTCAATTTGCCTGACCATTTATTCTACTCC | + |
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Preference number: 3 (lower is better) Translates to: VTPITLLSLLLH*HFNLPDHLFYS Trigger: GGAGTAGAATAAATGGTCAGGCAAATTGAAGTGCCAGTGGAGCAATAGGGACAGCAAAGTTATGGGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 72 bp | CATCACATATGCACCAATCAAATGCATCCCTACTACTaGGTAAGTGCATGTGGCTTGGGTCCATGTTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: HHICTNQMHPYY*VSACGLGPCFN Trigger: ATTGAAACATGGACCCAAGCCACATGCACTTACTCAGTAGTAGGGATGCATTTGATTGGTGCATATGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 72 bp | ATTTCACCAATCACCTCTCATAGGCTCTCCTCATGGTaGCATGCATCAACTCTTTTGCATGACCTCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: ISPITSHRLSSW*HASTLLHDLFN Trigger: ATTGAAGAGGTCATGCAAAAGAGTTGATGCATGTCACCATGAGGAGAGCCTATGAGAGGTGATTGGTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR GCA 72 bp | ATTTGCCTGACCATTTATTCTACTCCCTGTGTTCACTaGTGGGTAAGACTGTTTATTCAGGTACTTCGATGG | + |
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Preference number: 3 (lower is better) Translates to: ICLTIYSTPCVH*WVRLFIQVLRW Trigger: CCATCGAAGTACCTGAATAAACAGTCTTACCCAGCAGTGAACACAGGGAGTAGAATAAATGGTCAGGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | CCAGTTAATTCATCAGAGCCCAGTTGTAAGATCCGATaGAGCAAAACAGACAAGAGCACCAGATTTGAACAA | + |
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Preference number: 3 (lower is better) Translates to: PVNSSEPSCKIR*SKTDKSTRFEQ Trigger: TTGTTCAAATCTGGTGCTCTTGTCTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | GGTCCTGGTGCCCATAAGCCTCTGATTATAACACAATaGAGAATGCATTTTGTCCATCTTGAAAACTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GPGAHKPLIITQ*RMHFVHLENSP Trigger: TGGAGAGTTTTCAAGATGGACAAAATGCATTCTCCATTGTGTTATAATCAGAGGCTTATGGGCACCAGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 72 bp | TCAACATTTGTGCTGCTGGGAGTAAGATGGTGGTGTTaGCATTCCAAACTAATTCACTTAATAGTCTACCCT | + |
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Preference number: 3 (lower is better) Translates to: STFVLLGVRWWC*HSKLIHLIVYP Trigger: AGGGTAGACTATTAAGTGAATTAGTTTGGAATGTCAACACCACCATCTTACTCCCAGCAGCACAAATGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR GCA 72 bp | GTTCTGCTTTATGCCTGTAGGTACAGAAGAAAGAAATaGAACAACCCATGCCATATTCAAGCACACTATAGA | + |
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Preference number: 3 (lower is better) Translates to: VLLYACRYRRKK*NNPCHIQAHYR Trigger: TCTATAGTGTGCTTGAATATGGCATGGGTTGTTGCATTTCTTTCTTCTGTACCTACAGGCATAAAGCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | AACCCATGCCATATTCAAGCACACTATAGAACACATTaGTTGGGAGGTTATAGTAAAGAGAAGTCTCTACAG | + |
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Preference number: 3 (lower is better) Translates to: NPCHIQAHYRTH*LGGYSKEKSLQ Trigger: CTGTAGAGACTTCTCTTTACTATAACCTCCCAACCAATGTGTTCTATAGTGTGCTTGAATATGGCATGGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CCA 72 bp | GAACAAAGCCTTTTTCCTTACATCCTTAGCATGTTATaGTATGTGGCTCACATGCAATTTACTCTGATAGGG | + |
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Preference number: 3 (lower is better) Translates to: EQSLFPYILSML*YVAHMQFTLIG Trigger: CCCTATCAGAGTAAATTGCATGTGAGCCACATACCATAACATGCTAAGGATGTAAGGAAAAAGGCTTTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 72 bp | GAGGCTACACCTTCACCAATACTCCTTTTTATCATCTaGTTAACATCACCAGTTATTAGTTACTGTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: EATPSPILLFII*LTSPVISYCPW Trigger: CCATGGACAGTAACTAATAACTGGTGATGTTAATCAGATGATAAAAAGGAGTATTGGTGAAGGTGTAGCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR TCA 72 bp | GATTATAACACAATGGAGAATGCATTTTGTCCATCTTaGAAACTCTCCACAGTCTATCACCATCTCAACAGT | + |
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Preference number: 3 (lower is better) Translates to: DYNTMENAFCPS*KLSTVYHHLNS Trigger: ACTGTTGAGATGGTGATAGACTGTGGAGAGTTTTCAAGATGGACAAAATGCATTCTCCATTGTGTTATAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR-3UTR CAA 90 bp | GTTACTGTCCATGGAATGAGCTTTAAATTCAACCAGAAAATAATTGGTCACTCCAGTAAGATGGTGGTGTaGACATTCCAAACTAATTCA | + |
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Preference number: 3 (lower is better) Translates to: VTVHGMSFKFNQKIIGHSSKMVV*TFQTNS Trigger: TGAATTAGTTTGGAATGTCAACACCACCATCTTACT...GGAGTGACCAATTATTTTCTGGTTGAATTTAAAGCTCATTCCATGGACAGTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | ATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGGTTGTCCTGCCGTCTACTGTACAGATCCCACTaGGCAGGCTCCAGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: ISCPRGVVLLSLGLSCRLLYRSH*AGSRQS Trigger: GGATTGCCTGGAGCCTGCTCAGTGGGATCTGTACAG...TAGACGGCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCTGGGACAGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | ATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGGTTGTCCTGCCGTCTAATTTGCTCATTGTCTTaGAGAGGTAGAGGAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ISCPRGVVLLSLGLSCRLICSLS*RGRGGE Trigger: TTCCCCTCCTCTACCTCTTCAAGACAATGAGCAAAT...TAGACGGCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCTGGGACAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CAA 72 bp | ATAGGGTCTATTTCCTGTCCCAGAGGAGTGGTACTCTaGAGCCTGGGGTTGTCCTGCCGTCTAAGGATATTG | + |
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Preference number: 4 (lower is better) Translates to: IGSISCPRGVVL*SLGLSCRLRIL Trigger: CAATATCCTTAGACGGCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCTGGGACAGGAAATAGACCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | TATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGGTTGTCCTGCCGTCTAAGACTTGCAGAGCATaGAAACCTTTTGTCACATTT | + |
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Preference number: 4 (lower is better) Translates to: YFLSQRSGTLEPGVVLPSKTCRA*KPFVTF Trigger: AAATGTGACAAAAGGTTTTCATGCTCTGCAAGTCTT...AGACGGCAGGACAACCCCAGGCTCAAGAGTACCACTCCTCTGGGACAGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CCA 90 bp | GTTAATTCATCAGAGCCCAGTTGTAAGATCCGATGGAGCAAAACAGACAAGAGCTTCCTGGGTACACAGTaGCCATTCCTTGTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VNSSEPSCKIRWSKTDKSFLGTQ*PFLVSS Trigger: TGAAGAGACAAGGAATGGCCACTGTGTACCCAGGAA...GCTCTTGTCTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| 3UTR CAA 72 bp | ACTTTGCTGTCCCTATTGCTCCACTGGCACTTCAATTaGCCTGACCATTTATTCTACTCCCTGTGTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: TLLSLLLHWHFN*PDHLFYSLCSL Trigger: CAGTGAACACAGGGAGTAGAATAAATGGTCAGGCAAATTGAAGTGCCAGTGGAGCAATAGGGACAGCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | TTGTCAAAGCCAAATGAAATAACCCTAATCCGAATTGAGTTTATTTGTAAGGCGCTGTACAGATCCCACTaGGCAGGCTCCAGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: LSKPNEITLIRIEFICKALYRSH*AGSRQS Trigger: GGATTGCCTGGAGCCTGCTCAGTGGGATCTGTACAG...CGCCTTACAAATAAACTCAATTCGGATTAGGGTTATTTCATTTGGCTTTGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| 3UTR CAA 72 bp | ATGGTACTGGCATCTTCAATGCACTGGGGTTTTCCATaGCAACTAGGCTGTAATTTCACCAATCACCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: MVLASSMHWGFP*QLGCNFTNHLS Trigger: TGAGAGGTGATTGGTGAAATTACAGCCTAGTTGCAATGGAAAACCCCAGTGCATTGAAGATGCCAGTACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR GCA 90 bp | GTGTACATCTATGTTTGTGTCTGCTACATGCACACCTACCTTAGAGGGTCGTCACATTTACAAGTCTTCTaGAGTCTCCATTTCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VYIYVCVCYMHTYLRGSSHLQVF*SLHFFA Trigger: TGCAAAGAAATGGAGACTGCAGAAGACTTGTAAATG...TGACGACCCTCTAAGGTAGGTGTGCATGTAGCAGACACAAACATAGATGTACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| 3UTR CAA 72 bp | CTCAACATTTGTGCTGCTGGGAGTAAGATGGTGGTGTaGACATTCCAAACTAATTCACTTAATAGTCTACCC | + |
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Preference number: 4 (lower is better) Translates to: LNICAAGSKMVV*TFQTNSLNSLP Trigger: GGGTAGACTATTAAGTGAATTAGTTTGGAATGTCAACACCACCATCTTACTCCCAGCAGCACAAATGTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CCA 90 bp | CTTAGCATGTTATGGTATGTGGCTCACATGCAATTTACTCTGATAGGGTCTATTATTGGGTTTTATTCCTaGGTACACAGTGGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: LSMLWYVAHMQFTLIGSIIGFYS*VHSGHS Trigger: GGAATGGCCACTGTGTACCCAGGAATAAAACCCAAT...AATAGACCCTATCAGAGTAAATTGCATGTGAGCCACATACCATAACATGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CCA 90 bp | GTTAATTCATCAGAGCCCAGTTGTAAGATCCGATGGAGCAAAACAGACAAGAGCTTCCACACACTTGTGTaGATTATCTTCAGAGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: VNSSEPSCKIRWSKTDKSFHTLV*IIFRVN Trigger: ATTCACTCTGAAGATAATCCACACAAGTGTGTGGAA...GCTCTTGTCTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | AACAACCAGTTAATTCATCAGAGCCCAGTTGTAAGATCCGATGGAGCAAAACAGTTTAAGGTAGGAAGATaGGGAAAAACATTTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: NNQLIHQSPVVRSDGAKQFKVGR*GKTFAT Trigger: TGTGGCAAATGTTTTTCCTCATCTTCCTACCTTAAA...CTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAACTGGTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | CTTAGCATGTTATGGTATGTGGCTCACATGCAATTTACTCTGATAGGGTCTATTATGTTGCTTAAGGAATaGGGGAAAGCCAAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: LSMLWYVAHMQFTLIGSIMLLKE*GKAKAF Trigger: AAATGCTTTGGCTTTCCCTCATTCCTTAAGCAACAT...AATAGACCCTATCAGAGTAAATTGCATGTGAGCCACATACCATAACATGCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR TCA 90 bp | TTGTCAAAGCCAAATGAAATAACCCTAATCCGAATTGAGTTTATTTGTAAGGCGAGATGTGCCCATCCTTaGAGTTGCAGCATCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: LSKPNEITLIRIEFICKARCAHP*SCSIHL Trigger: TAAATGGATGCTGCAACTTCAAGGATGGGCACATCT...CGCCTTACAAATAAACTCAATTCGGATTAGGGTTATTTCATTTGGCTTTGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| CDS-3UTR TCA 90 bp | TTGTCAAAGCCAAATGAAATAACCCTAATCCGAATTGAGTTTATTTGTAAGGCGTGCATTGTAATTGTGTaGTTCAATAGGAGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSKPNEITLIRIEFICKACIVIV*FNRRRS Trigger: GCTCCTCCTCCTATTGAATCACACAATTACAATGCA...CGCCTTACAAATAAACTCAATTCGGATTAGGGTTATTTCATTTGGCTTTGACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| 3UTR CAA 72 bp | ATGAACAGCCACTATTCATCAAATGAGAATTCTATCTaGACTTCAGAACTGGCAAATGAAATAGCCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: MNSHYSSNENSI*TSELANEIAHV Trigger: CACATGGGCTATTTCATTTGCCAGTTCTGAAGTCAAGATAGAATTCTCATTTGATGAATAGTGGCTGTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CAA 90 bp | GTGTACATCTATGTTTGTGTCTGCTACATGCACACCTACCTTAGAGGGTCGTCAGAGATGTGCCCATCCTaGAAGTTGCAGCATCCATTT | + |
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Preference number: 5 (lower is better) Translates to: VYIYVCVCYMHTYLRGSSEMCPS*KLQHPF Trigger: AAATGGATGCTGCAACTTCAAGGATGGGCACATCTC...TGACGACCCTCTAAGGTAGGTGTGCATGTAGCAGACACAAACATAGATGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| CDS TCA 90 bp | CACACTTATAGGGATTGCCTTCAGAATGGAATTTTTGATGTCGCCTaGGAGATGAAGATGAGCAGAAACATCTGCCACAGTCTTCACACT | + |
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Preference number: 5 (lower is better) Translates to: HTYRDCLQNGIFDVA*EMKMSRNICHSLHT Trigger: AGTGTGAAGACTGTGGCAGATGTTTCTGCTCATCTTCATCTCTCAGGCGACATCAAAAATTCCATTCTGAAGGCAATCCCTATAAGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CAA 90 bp | AACAACCAGTTAATTCATCAGAGCCCAGTTGTAAGATCCGATGGAGCAAAACAGGATGCTCCTGAAGACTaGCAGAGCATGAAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: NNQLIHQSPVVRSDGAKQDAPED*QSMKTF Trigger: AAAGGTTTTCATGCTCTGCAAGTCTTCAGGAGCATC...CTGTTTTGCTCCATCGGATCTTACAACTGGGCTCTGATGAATTAACTGGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS-3UTR CAA 90 bp | GTTACTGTCCATGGAATGAGCTTTAAATTCAACCAGAAAATAATTGGTCACTCCCACAGTGGCCATTCCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: VTVHGMSFKFNQKIIGHSHSGHS*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGGAATGGCCACTGTG...GGAGTGACCAATTATTTTCTGGTTGAATTTAAAGCTCATTCCATGGACAGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057070.9 |
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| CDS TCA 90 bp | TTTACAAGTCTTCTGCAGTCTCCATTTCTTTGCATTGTAATTGTGTaGTTCAATAGGAGGAGGAGCTACCATAGTGTAGTCACAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: FTSLLQSPFLCIVIV*FNRRRSYHSVVTTW Trigger: CCAGGTTGTGACTACACTATGGTAGCTCCTCCTCCTATTGAATCACACAATTACAATGCAAAGAAATGGAGACTGCAGAAGACTTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| CDS-3UTR CAA 90 bp | TTGTCAAAGCCAAATGAAATAACCCTAATCCGAATTGAGTTTATTTGTAAGGCGCACAGTGGCCATTCCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LSKPNEITLIRIEFICKAHSGHS*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGGAATGGCCACTGTG...CGCCTTACAAATAAACTCAATTCGGATTAGGGTTATTTCATTTGGCTTTGACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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| CDS-3UTR CAA 90 bp | ATGTGTACATCTATGTTTGTGTCTGCTACATGCACACCTACCTTAGAGGGTCGTGCAGTCTCCATTTCTTaGCATTGTAATTGTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: MCTSMFVSATCTPTLEGRAVSIS*HCNCVI Trigger: AATCACACAATTACAATGCAAAGAAATGGAGACTGC...ACGACCCTCTAAGGTAGGTGTGCATGTAGCAGACACAAACATAGATGTACACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172266.8 |
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