Pregenerated sensors for ZFP455 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051037Ensembl transcript IDs: ENSMUST00000117110.2, ENSMUST00000120861.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTaGATACATGTAGTTTGGATCCATATTTCAATTCACTGTCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: KDITYPPVKRIPSTK*IHVVWIHISIHCQV Trigger: AACTTGACAGTGAATTGAAATATGGATCCAAACTACATGTATGCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGGAAGTGGGGGTAGAGTTTTCACAGGAGAAACATTATTaGGGGAGCTTGGGTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GFYSERLLIGKEVGVEFSQEKHY*GSLGGP Trigger: GGGGCCACCCAAGCTCCCCCAATAATGTTTCTCCTG...TGAAAACTCTACCCCCACTTCCTTCCCTATTAAGAGCCTTTCTGAGTAGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCATTATTGGGGGAGCTTaGGTGGCCCCATTGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QCVLLEFPGERNTNARSTIIGGA*VAPLRK Trigger: TTTCCTCAATGGGGCCACCCAAGCTCCCCCAATAAT...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCCAGGAGAAACATTATTaGGGGAGCTTGGGTGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: FKKDITYPPVKRIPSTKCQEKHY*GSLGGP Trigger: GGGGCCACCCAAGCTCCCCCAATAATGTTTCTCCTG...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAACCCTATGGATTGATTTaGGTTGGATACAGTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RVFLSKPGLLLRKALNREPYGLI*VGYSLK Trigger: CTTCAAACTGTATCCAACTCAAATCAATCCATAGGG...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAAATCCCTTCTACTAAGTaGATACATGTAGTTTGGATC | + |
|
Preference number: 2 (lower is better) Translates to: RVFLSKPGLLLRKALNREIPSTK*IHVVWI Trigger: GATCCAAACTACATGTATGCACTTAGTAGAAGGGAT...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTATCGAGCTTTTTACATaGCCAGGAGAAACATTATTG | + |
|
Preference number: 2 (lower is better) Translates to: KSFKSIPEQAWASTQKGSIELFT*PGETLL Trigger: CAATAATGTTTCTCCTGGGCATGTAAAAAGCTCGAT...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCAAATGCAACAACCTATaGCATATTCAAGCACACTAT | + |
|
Preference number: 2 (lower is better) Translates to: QCVLLEFPGERNTNARSTKCNNL*HIQAHY Trigger: ATAGTGTGCTTGAATATGGCATAGGTTGTTGCATTT...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR CAA 90 bp | GATGACATTCTCAAAATTTGTGCTCCTGGGAGTAAGATGGTGGTGTaGACATTTCAAACTAATTCACTTAGTAGTCTACCCTATGGATTG | + |
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Preference number: 2 (lower is better) Translates to: DDILKICAPGSKMVV*TFQTNSLSSLPYGL Trigger: CAATCCATAGGGTAGACTACTAAGTGAATTAGTTTGAAATGTCAACACCACCATCTTACTCCCAGGAGCACAAATTTTGAGAATGTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR TCA 90 bp | AATAAATGCAACAACCTATGCCATATTCAAGCACACTATAGAACACACTGGTTGCCCTATGGATTGATTTaGGTTGGATACAGTTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NKCNNLCHIQAHYRTHWLPYGLI*VGYSLK Trigger: CTTCAAACTGTATCCAACTCAAATCAATCCATAGGG...CAACCAGTGTGTTCTATAGTGTGCTTGAATATGGCATAGGTTGTTGCATTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR TCA 90 bp | AATAAATGCAACAACCTATGCCATATTCAAGCACACTATAGAACACACTGGTTGGTAAGATGGTGGTGTTaGCATTTCAAACTAATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NKCNNLCHIQAHYRTHWLVRWWC*HFKLIH Trigger: GTGAATTAGTTTGAAATGTCAACACCACCATCTTAC...CAACCAGTGTGTTCTATAGTGTGCTTGAATATGGCATAGGTTGTTGCATTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTCCAGGAGAAACATTATaGGGGGAGCTTGGGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: KSFKSIPEQAWASTQKGSPGETL*GELGWP Trigger: GGGCCACCCAAGCTCCCCCAATAATGTTTCTCCTGG...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCCATTATTGGGGGAGCTaGGGTGGCCCCATTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FKKDITYPPVKRIPSTKCHYWGS*GGPIEE Trigger: TTCCTCAATGGGGCCACCCAAGCTCCCCCAATAATG...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR-3UTR CAA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCACCCTATGGATTGATTaGAGTTGGATACAGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QCVLLEFPGERNTNARSTTLWID*SWIQFE Trigger: TTCAAACTGTATCCAACTCAAATCAATCCATAGGGT...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR TCA 72 bp | TCAAAATTTGTGCTCCTGGGAGTAAGATGGTGGTGTTaGCATTTCAAACTAATTCACTTAGTAGTCTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SKFVLLGVRWWC*HFKLIHLVVYP Trigger: AGGGTAGACTACTAAGTGAATTAGTTTGAAATGTCAACACCACCATCTTACTCCCAGGAGCACAAATTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR GCA 72 bp | ACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTaGATACATGTAGTTTGGATCCATATTTCAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TYPPVKRIPSTK*IHVVWIHISIH Trigger: GTGAATTGAAATATGGATCCAAACTACATGTATGCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR CCA 72 bp | AAACGCATCCCTTCTACTAAGTGCATACATGTAGTTTaGATCCATATTTCAATTCACTGTCAAGTTTCTATG | + |
|
Preference number: 3 (lower is better) Translates to: KRIPSTKCIHVV*IHISIHCQVSM Trigger: CATAGAAACTTGACAGTGAATTGAAATATGGATCCAAACTACATGTATGCACTTAGTAGAAGGGATGCGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAATTCCTGGGTACACAGTaGCTGCTGCTTGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVFLSKPGLLLRKALNREFLGTQ*LLLVSS Trigger: TGAAGAGACAAGCAGCAGCCACTGTGTACCCAGGAA...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CCA 90 bp | GGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGGAAGTGGGGGTAGAGTTTTCATTCCTGGGTACACAGTaGCTGCTGCTTGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFYSERLLIGKEVGVEFSFLGTQ*LLLVSS Trigger: TGAAGAGACAAGCAGCAGCCACTGTGTACCCAGGAA...TGAAAACTCTACCCCCACTTCCTTCCCTATTAAGAGCCTTTCTGAGTAGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTATTTGCTCATGTTCCTaGAGGGGTAGAGGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSFKSIPEQAWASTQKGSICSCS*RGRGGE Trigger: TTCCCCTCCTCTACCCCTTCAGGAACATGAGCAAAT...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGATTTCTCTCCAGCATaGACTGTCATGTGTCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVFLSKPGLLLRKALNREDFSPA*TVMCRV Trigger: GACTCGACACATGACAGTTCATGCTGGAGAGAAATC...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR GCA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCCAAGGCCCTTGTCTTTaGTCCAGAAATGTCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QCVLLEFPGERNTNARSTQGPCL*SRNVTR Trigger: CCTGGTGACATTTCTGGAGCAAAGACAAGGGCCTTG...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | GGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGGAAGTGGGGGTAGAGTTTTCAGTGTATCCTAAGGGCTaGGTGATAACGAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GFYSERLLIGKEVGVEFSVYPKG*VITKGF Trigger: AAAGCCTTTCGTTATCACTCAGCCCTTAGGATACAC...TGAAAACTCTACCCCCACTTCCTTCCCTATTAAGAGCCTTTCTGAGTAGAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCGATTTCTCTCCAGCATaGACTGTCATGTGTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QCVLLEFPGERNTNARSTDFSPA*TVMCRV Trigger: GACTCGACACATGACAGTTCATGCTGGAGAGAAATC...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CCA 90 bp | GGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGGAAGTGGGGGTAGAGTTTTCAATTAGGTATTATTCCTaGGTACACAGTGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GFYSERLLIGKEVGVEFSIRYYS*VHSGCC Trigger: GCAGCAGCCACTGTGTACCCAGGAATAATACCTAAT...TGAAAACTCTACCCCCACTTCCTTCCCTATTAAGAGCCTTTCTGAGTAGAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTGTGATGAGCGAGTACTaGAGGCTTTATGACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: KSFKSIPEQAWASTQKGSVMSEY*RLYDTL Trigger: AAGAGTGTCATAAAGCCTTCAGTACTCGCTCATCAC...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCATTTGCTCATGTTCCTaGAGGGGTAGAGGAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: FKKDITYPPVKRIPSTKCICSCS*RGRGGE Trigger: TTCCCCTCCTCTACCCCTTCAGGAACATGAGCAAAT...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCGTGTATCCTAAGGGCTaGGTGATAACGAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QCVLLEFPGERNTNARSTVYPKG*VITKGF Trigger: AAAGCCTTTCGTTATCACTCAGCCCTTAGGATACAC...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR GCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGTCTTCAGAGTGAATTaGTTGATGCCTTACAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RVFLSKPGLLLRKALNREVFRVN*LMPYKA Trigger: TGCCTTGTAAGGCATCAAGCAATTCACTCTGAAGAC...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR GCA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTGTCTTCAGAGTGAATTaGTTGATGCCTTACAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSFKSIPEQAWASTQKGSVFRVN*LMPYKA Trigger: TGCCTTGTAAGGCATCAAGCAATTCACTCTGAAGAC...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | GGCTTCTACTCAGAAAGGCTCTTAATAGGGAAGGAAGTGGGGGTAGAGTTTTCAGGTTTCTCCCCTATATaGATTCTTCGTCGTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: GFYSERLLIGKEVGVEFSGFSPI*ILRRLI Trigger: TATTAAACGACGAAGAATTCATATAGGGGAGAAACC...TGAAAACTCTACCCCCACTTCCTTCCCTATTAAGAGCCTTTCTGAGTAGAAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | AGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTTAATAGGGAAAAGACTTGCAGAACATaGAAACCTTTTGTCACATTC | + |
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Preference number: 4 (lower is better) Translates to: RVFLSKPGLLLRKALNREKTCRT*KPFVTF Trigger: GAATGTGACAAAAGGTTTTCATGTTCTGCAAGTCTT...TTCCCTATTAAGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CCA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCATTAGGTATTATTCCTaGGTACACAGTGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FKKDITYPPVKRIPSTKCIRYYS*VHSGCC Trigger: GCAGCAGCCACTGTGTACCCAGGAATAATACCTAAT...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR GCA 90 bp | AATAAATGCAACAACCTATGCCATATTCAAGCACACTATAGAACACACTGGTTGGTACACAGTGGCTGCTaGTTGTCTCTTCATATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NKCNNLCHIQAHYRTHWLVHSGC*LSLHIP Trigger: TGGGATATGAAGAGACAAGCAGCAGCCACTGTGTAC...CAACCAGTGTGTTCTATAGTGTGCTTGAATATGGCATAGGTTGTTGCATTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | AATAAATGCAACAACCTATGCCATATTCAAGCACACTATAGAACACACTGGTTGGTGATGAGCGAGTACTaGAGGCTTTATGACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKCNNLCHIQAHYRTHWLVMSEY*RLYDTL Trigger: AAGAGTGTCATAAAGCCTTCAGTACTCGCTCATCAC...CAACCAGTGTGTTCTATAGTGTGCTTGAATATGGCATAGGTTGTTGCATTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCGAGGGGAAAGTCTTTTaGCACATATTTCATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FKKDITYPPVKRIPSTKCEGKVF*HIFHPC Trigger: ACAAGGATGAAATATGTGTCAAAAGACTTTCCCCTC...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | TGGATACAGTTTGAAGGATTAGGAATGGTTTTTACCGCACACCATACAAGGTTTTTTAAGGCAGGAAGATaGGGAAAAGCATCTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: WIQFEGLGMVFTAHHTRFFKAGR*GKASAT Trigger: TGTAGCAGATGCTTTTCCTCATCTTCCTGCCTTAAA...AAACCTTGTATGGTGTGCGGTAAAAACCATTCCTAATCCTTCAAACTGTATCCA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR CAA 72 bp | CTCAAAATTTGTGCTCCTGGGAGTAAGATGGTGGTGTaGACATTTCAAACTAATTCACTTAGTAGTCTACCC | + |
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Preference number: 4 (lower is better) Translates to: LKICAPGSKMVV*TFQTNSLSSLP Trigger: GGGTAGACTACTAAGTGAATTAGTTTGAAATGTCAACACCACCATCTTACTCCCAGGAGCACAAATTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | TGGATACAGTTTGAAGGATTAGGAATGGTTTTTACCGCACACCATACAAGGTTTATGTTGCTTAAGGAATaGGGGAAAGCCAAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: WIQFEGLGMVFTAHHTRFMLLKE*GKAKGF Trigger: AAATCCTTTGGCTTTCCCTCATTCCTTAAGCAACAT...AAACCTTGTATGGTGTGCGGTAAAAACCATTCCTAATCCTTCAAACTGTATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | TGGATACAGTTTGAAGGATTAGGAATGGTTTTTACCGCACACCATACAAGGTTTGAGGGGAAAGTCTTTTaGCACATATTTCATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WIQFEGLGMVFTAHHTRFEGKVF*HIFHPC Trigger: ACAAGGATGAAATATGTGTCAAAAGACTTTCCCCTC...AAACCTTGTATGGTGTGCGGTAAAAACCATTCCTAATCCTTCAAACTGTATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGTAAGATGGTGGTGTTGACATTTCAAACTAATTCACTTAGTAGTCTATTCCACACACTTGTGTaGATTGTCTTCAGAGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGSKMVVLTFQTNSLSSLFHTLV*IVFRVN Trigger: ATTCACTCTGAAGACAATCCACACAAGTGTGTGGAA...TAGACTACTAAGTGAATTAGTTTGAAATGTCAACACCACCATCTTACTCCCAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | ACCCTATGGATTGATTTGAGTTGGATACAGTTTGAAGGATTAGGAATGGTTTTTTTTAAGGCAGGAAGATaGGGAAAAGCATCTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: TLWIDLSWIQFEGLGMVFFKAGR*GKASAT Trigger: TGTAGCAGATGCTTTTCCTCATCTTCCTGCCTTAAA...AAAAACCATTCCTAATCCTTCAAACTGTATCCAACTCAAATCAATCCATAGGGT 38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGTAAGATGGTGGTGTTGACATTTCAAACTAATTCACTTAGTAGTCTAAAGACTTGCAGAACATaGAAACCTTTTGTCACATTC | + |
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Preference number: 4 (lower is better) Translates to: PGSKMVVLTFQTNSLSSLKTCRT*KPFVTF Trigger: GAATGTGACAAAAGGTTTTCATGTTCTGCAAGTCTT...TAGACTACTAAGTGAATTAGTTTGAAATGTCAACACCACCATCTTACTCCCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| 3UTR CAA 72 bp | CTATGCCATATTCAAGCACACTATAGAACACACTGGTaGGTAGGTTATAGTAAAGAGAAGTCTCTACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LCHIQAHYRTHW*VGYSKEKSLQF Trigger: AAACTGTAGAGACTTCTCTTTACTATAACCTACCAACCAGTGTGTTCTATAGTGTGCTTGAATATGGCATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR TCA 90 bp | ACCCTATGGATTGATTTGAGTTGGATACAGTTTGAAGGATTAGGAATGGTTTTTGGTTTCTCCCCTATATaGATTCTTCGTCGTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: TLWIDLSWIQFEGLGMVFGFSPI*ILRRLI Trigger: TATTAAACGACGAAGAATTCATATAGGGGAGAAACC...AAAAACCATTCCTAATCCTTCAAACTGTATCCAACTCAAATCAATCCATAGGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCCACAGTGGCTGCTGCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: QCVLLEFPGERNTNARSTHSGCC*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGCAGCAGCCACTGTG...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCCTCTTCAGTATGGATTaGCTCATGTTCCTGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QCVLLEFPGERNTNARSTLFSMD*LMFLKG Trigger: CCCCTTCAGGAACATGAGCAAATCCATACTGAAGAG...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | AAGTCATTTAAGAGTATTCCTGAGCAAGCCTGGGCTTCTACTCAGAAAGGCTCTCTCTTCAGTATGGATTaGCTCATGTTCCTGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: KSFKSIPEQAWASTQKGSLFSMD*LMFLKG Trigger: CCCCTTCAGGAACATGAGCAAATCCATACTGAAGAG...AGAGCCTTTCTGAGTAGAAGCCCAGGCTTGCTCAGGAATACTCTTAAATGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCGGAGGGGAAAGTCTTTaGACACATATTTCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QCVLLEFPGERNTNARSTGGESL*THISSL Trigger: CAAGGATGAAATATGTGTCAAAAGACTTTCCCCTCC...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | CAATGTGTTCTGTTAGAATTTCCTGGAGAGAGAAACACTAACGCCCGTTCAACCGATGCTCCTGAAGACTaGCAGAACATGAAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: QCVLLEFPGERNTNARSTDAPED*QNMKTF Trigger: AAAGGTTTTCATGTTCTGCAAGTCTTCAGGAGCATC...GGTTGAACGGGCGTTAGTGTTTCTCTCTCCAGGAAATTCTAACAGAACACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | TTCAAGAAAGACATTACATATCCACCAGTCAAACGCATCCCTTCTACTAAGTGCGATGCTCCTGAAGACTaGCAGAACATGAAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: FKKDITYPPVKRIPSTKCDAPED*QNMKTF Trigger: AAAGGTTTTCATGTTCTGCAAGTCTTCAGGAGCATC...GCACTTAGTAGAAGGGATGCGTTTGACTGGTGGATATGTAATGTCTTTCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | TGGATACAGTTTGAAGGATTAGGAATGGTTTTTACCGCACACCATACAAGGTTTGGAGGGGAAAGTCTTTaGACACATATTTCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WIQFEGLGMVFTAHHTRFGGESL*THISSL Trigger: CAAGGATGAAATATGTGTCAAAAGACTTTCCCCTCC...AAACCTTGTATGGTGTGCGGTAAAAACCATTCCTAATCCTTCAAACTGTATCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS-3UTR CAA 90 bp | ACCCTATGGATTGATTTGAGTTGGATACAGTTTGAAGGATTAGGAATGGTTTTTTTCAGAGTGAAGTATTaGATGTCTTTTAAGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TLWIDLSWIQFEGLGMVFFRVKY*MSFKAG Trigger: TCCTGCCTTAAAAGACATCAAATACTTCACTCTGAA...AAAAACCATTCCTAATCCTTCAAACTGTATCCAACTCAAATCAATCCATAGGGT 36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS GCA 72 bp | CGGATCATTAGGTATTATTCCTGGGTACACAGTGGCTaGTGCTTGTCTCTTCATATCCCAAGGCCCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RIIRYYSWVHSG*CLSLHIPRPLS Trigger: AGACAAGGGCCTTGGGATATGAAGAGACAAGCAGCAGCCACTGTGTACCCAGGAATAATACCTAATGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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| CDS GCA 72 bp | ATCATTAGGTATTATTCCTGGGTACACAGTGGCTGCTaGTTGTCTCTTCATATCCCAAGGCCCTTGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: IIRYYSWVHSGC*LSLHIPRPLSL Trigger: CAAAGACAAGGGCCTTGGGATATGAAGAGACAAGCAGCAGCCACTGTGTACCCAGGAATAATACCTAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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| CDS CAA 72 bp | ATTCCACACACTTGTGTGGATTGTCTTCAGAGTGAATaGCTTGATGCCTTACAAGGCAGGAGGATGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: IPHTCVDCLQSE*LDALQGRRMRK Trigger: TTTCCTCATCCTCCTGCCTTGTAAGGCATCAAGCAATTCACTCTGAAGACAATCCACACAAGTGTGTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117110.2 ENSMUST00000120861.8 |
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| CDS CCA 72 bp | CTTGCTGTAATTGTTCGGATCATTAGGTATTATTCCTaGGTACACAGTGGCTGCTGCTTGTCTCTTCATATC | + |
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Preference number: 6 (lower is better) Translates to: LAVIVRIIRYYS*VHSGCCLSLHI Trigger: GATATGAAGAGACAAGCAGCAGCCACTGTGTACCCAGGAATAATACCTAATGATCCGAACAATTACAGCAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120861.8 |
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