Pregenerated sensors for ZFP449 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073176Ensembl transcript IDs: ENSMUST00000101560.4
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAAGGCTTATGAGACAAACATCTACAGCAGCCTATACTGTTTCTaGGCTAGTGTTAACGTTGATAGAACCTGTTTCCCTTCACGGTTC | + |
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Preference number: 1 (lower is better) Translates to: QKAYETNIYSSLYCF*ASVNVDRTCFPSRF Trigger: GAACCGTGAAGGGAAACAGGTTCTATCAACGTTAACACTAGCTCAGAAACAGTATAGGCTGCTGTAGATGTTTGTCTCATAAGCCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR GCA 90 bp | GTCCTACCTATAAACGACTGCCACCGTTTATATGCTTTGTGCTTATaGTTATCATATGGTTGCCTTGGAACCAAACCTTTCCACTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: VLPINDCHRLYALCL*LSYGCLGTKPFHCN Trigger: ATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGCAGTCGTTTATAGGTAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR GCA 90 bp | CATCCATTAACTGGTCCTACCTATAAACGACTGCCACCGTTTATATaGTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAAACC | + |
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Preference number: 1 (lower is better) Translates to: HPLTGPTYKRLPPFI*FVLMLIIWLPWNQT Trigger: GGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGCAGTCGTTTATAGGTAGGACCAGTTAATGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CCA 90 bp | AAACGACTGCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATaGTTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: KRLPPFICFVLMLII*LPWNQTFPLQLNNR Trigger: TCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGCAGTCGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CCA 90 bp | CCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTaGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAG | + |
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Preference number: 1 (lower is better) Translates to: PPFICFVLMLIIWLP*NQTFPLQLNNRKRQ Trigger: CTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 90 bp | AACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTGTaGGATTATAAAGTAAAATGCGAAAAGGTTAAGAATCACTGTATA | + |
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Preference number: 1 (lower is better) Translates to: NSVCVCVCVCVCACV*DYKVKCEKVKNHCI Trigger: TATACAGTGATTCTTAACCTTTTCGCATTTTACTTTATAATCTCACACACAAGCACACACACACACACACACACACACACACACAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 90 bp | TCAATGAGGATTTTCTGCCTTACTGTGAGATCTGAGTTGTTACTATaGTTACATGAGAACACTTATATAAGTACCAACTCTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SMRIFCLTVRSELLL*LHENTYISTNSVCV Trigger: CACACACACAGAGTTGGTACTTATATAAGTGTTCTCATGTAATCATAGTAACAACTCAGATCTCACAGTAAGGCAGAAAATCCTCATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CCA 90 bp | AGACATACTGGTTTAAGGCAGTGTGTCCCAAGGGATACTAGCAGAATACTACTGTCATTTCTTGCCACTTaGGGCACATCTATCTACTGG | + |
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Preference number: 2 (lower is better) Translates to: RHTGLRQCVPRDTSRILLSFLAT*GTSIYW Trigger: CCAGTAGATAGATGTGCCCCAAGTGGCAAGAAATGA...CAGTAGTATTCTGCTAGTATCCCTTGGGACACACTGCCTTAAACCAGTATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCAGACAAAAGGCTTATaGGACAAACATCTACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSGTLYDLALSHKLSLALQTKGL*DKHLQQ Trigger: CTGCTGTAGATGTTTGTCTCATAAGCCTTTTGTCTG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCTGTTCATTAGGCCAATaGCATCCTCTTCACCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: GTLYDLALSHKLSLALFSCSLGQ*HPLHPS Trigger: ACTAGGGTGAAGAGGATGTCATTGGCCTAATGAACA...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CAA 90 bp | AATACAGAGCAGTTGGGCACATCCATTCTAAGGCACTGTTCTGGTTaGAATGCAATTCCACAAGAGAGAAAGAGAAGCCATTACATTCTG | + |
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Preference number: 2 (lower is better) Translates to: NTEQLGTSILRHCSG*NAIPQERKRSHYIL Trigger: CAGAATGTAATGGCTTCTCTTTCTCTCTTGTGGAATTGCATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCTGCCACCGTTTATATaGTTTGTGCTTATGCTTATC | + |
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Preference number: 2 (lower is better) Translates to: GSGTLYDLALSHKLSLALLPPFI*FVLMLI Trigger: GATAAGCATAAGCACAAAGCATATAAACGGTGGCAG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCAGCCTATACTGTTTCTaGGCTAGTGTTAACGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GTLYDLALSHKLSLALFSSLYCF*ASVNVD Trigger: ATCAACGTTAACACTAGCTCAGAAACAGTATAGGCT...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAAAACCAGAGAGAATCCTaGAGCAGGATGAAAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ISTFRLLPCYWGVILIPENQRES*SRMKIH Trigger: ATGGATTTTCATCCTGCTTCAGGATTCTCTCTGGTT...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTTTCTGCCTTACTGTaGGATCTGAGTTGTTACTAT | + |
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Preference number: 2 (lower is better) Translates to: GSGTLYDLALSHKLSLALFSALL*DLSCYY Trigger: ATAGTAACAACTCAGATCTCACAGTAAGGCAGAAAA...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR GCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCTGCTTATCATATGGTTaGCTTGGAACCAAACCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GTLYDLALSHKLSLALFSCLSYG*LGTKPF Trigger: GAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCA...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR GCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCTCAATGAGGATTTTCTaGCTTACTGTGAGATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GTLYDLALSHKLSLALFSSMRIF*LTVRSE Trigger: CTCAGATCTCACAGTAAGGCAGAAAATCCTCATTGA...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CAA 90 bp | CGACTGCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTaGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: RLPPFICFVLMLIIW*PWNQTFPLQLNNRK Trigger: TTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGCAGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTATGCTTTGTGCTTATaGTTATCATATGGTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSGTLYDLALSHKLSLALYALCL*LSYGCL Trigger: AAGGCAACCATATGATAAGCATAAGCACAAAGCATA...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAACATCTATCTACTGGCTaGTTTCATAATGACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ISTFRLLPCYWGVILIPEHLSTG*FHNDTG Trigger: TCCTGTGTCATTATGAAAGCAGCCAGTAGATAGATG...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CAA 90 bp | ATATACATTTCCACTTTATTAAAACCGTGTATAAATACAGAGCAGTaGGGCACATCCATTCTAAGGCACTGTTCTGGTTTGAATGCAATT | + |
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Preference number: 2 (lower is better) Translates to: IYISTLLKPCINTEQ*GTSILRHCSGLNAI Trigger: AATTGCATTCAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTATACACGGTTTTAATAAAGTGGAAATGTATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CAA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCTCATTTCTTGCCACTaGGGGCACATCTATCTACTG | + |
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Preference number: 3 (lower is better) Translates to: GSGTLYDLALSHKLSLALLISCH*GHIYLL Trigger: CAGTAGATAGATGTGCCCCAAGTGGCAAGAAATGAG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAATCACTGTCTCATTTCTaGCCACTTGGGGCACATCTA | + |
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Preference number: 3 (lower is better) Translates to: ISTFRLLPCYWGVILIPESLSHF*PLGAHL Trigger: TAGATGTGCCCCAAGTGGCAAGAAATGAGACAGTGA...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 72 bp | AACTGTAATTGGAAACAAGCCTGTTCATTAGGCCAATaGCATCCTCTTCACCCTAGTCCCCCTGAAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: NCNWKQACSLGQ*HPLHPSPPETK Trigger: TTTTGTTTCAGGGGGACTAGGGTGAAGAGGATGTCATTGGCCTAATGAACAGGCTTGTTTCCAATTACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CAA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAGAGCTAGTGTTAACGTaGATAGAACCTGTTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: ATVYMLCAYAYHMVALEPELVLT*IEPVSL Trigger: AAGGGAAACAGGTTCTATCAACGTTAACACTAGCTC...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CCA 72 bp | AAAAGACACATCCTGGCTCTGGCACTTTATATGATTTaGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: KRHILALALYMI*HLVTSSLLHCS Trigger: AGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCCAGGATGTGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CAA 90 bp | AGACATACTGGTTTAAGGCAGTGTGTCCCAAGGGATACTAGCAGAATACTACTGAAAATCCATGCAGACTaGTTCTTCAGTCCATCTAAA | + |
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Preference number: 3 (lower is better) Translates to: RHTGLRQCVPRDTSRILLKIHAD*FFSPSK Trigger: TTTAGATGGACTGAAGAACAAGTCTGCATGGATTTT...CAGTAGTATTCTGCTAGTATCCCTTGGGACACACTGCCTTAAACCAGTATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAAACAGTCAGAGTCTACTaGTACAACATCAACTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: ISTFRLLPCYWGVILIPETVRVY*YNINCK Trigger: CTTACAGTTGATGTTGTACAAGTAGACTCTGACTGT...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 72 bp | TATGAGACAAACATCTACAGCAGCCTATACTGTTTCTaGGCTAGTGTTAACGTTGATAGAACCTGTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: YETNIYSSLYCF*ASVNVDRTCFP Trigger: AGGGAAACAGGTTCTATCAACGTTAACACTAGCTCAGAAACAGTATAGGCTGCTGTAGATGTTTGTCTCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 72 bp | TCAAAGCTGCACTTACAAGTTCAGACAAAAGGCTTATaGGACAAACATCTACAGCAGCCTATACTGTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SKLHLQVQTKGL*DKHLQQPILFL Trigger: CAGAAACAGTATAGGCTGCTGTAGATGTTTGTCTCATAAGCCTTTTGTCTGAACTTGTAAGTGCAGCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CCA 72 bp | CCACCGTTTATATGCTTTGTGCTTATGCTTATCATATaGTTGCCTTGGAACCAAACCTTTCCACTGCAATTA | + |
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Preference number: 3 (lower is better) Translates to: PPFICFVLMLII*LPWNQTFPLQL Trigger: TAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGTGTGTaGGATTATAAAGTAAAATGCGAAAAGGTTAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCACV*DYKVKCEKVKN Trigger: ATTCTTAACCTTTTCGCATTTTACTTTATAATCTCACACACAAGCACACACACACACACACACACACACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CCA 72 bp | ATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTaGAACCAAACCTTTCCACTGCAATTAAACAACAGA | + |
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Preference number: 3 (lower is better) Translates to: ICFVLMLIIWLP*NQTFPLQLNNR Trigger: TCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCAAGGAGGCCTGGATTaGACAGCCCAGGGCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GSGTLYDLALSHKLSLALQGGLD*TAQGHS Trigger: GCTGTGGCCCTGGGCTGTGCAATCCAGGCCTCCTTG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR TCA 90 bp | GCTTTCATAATGACACAGGAAAACAAGTGTGGTAGGACTGTAACCGTTACCAGGCACTGGGGACATCGGTaGGGTTTGTCCCCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: AFIMTQENKCGRTVTVTRHWGHR*GLSPGL Trigger: GAGTCCTGGGGACAAACCTCACCGATGTCCCCAGTG...CCTGGTAACGGTTACAGTCCTACCACACTTGTTTTCCTGTGTCATTATGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | AGACATACTGGTTTAAGGCAGTGTGTCCCAAGGGATACTAGCAGAATACTACTGGAGGTTCTTCCAGGCTaGGGCTCTCGGGTGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RHTGLRQCVPRDTSRILLEVLPG*GSRVSL Trigger: GAGAGACACCCGAGAGCCCCAGCCTGGAAGAACCTC...CAGTAGTATTCTGCTAGTATCCCTTGGGACACACTGCCTTAAACCAGTATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGCTGGGGGCCAGCTTGTaGAATCCAGGCATCCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKLGASL*NPGIRH Trigger: GTGCCGGATGCCTGGATTCCACAAGCTGGCCCCCAG...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR TCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTGTTGAATGCTTCATaGGGCCCGGCAGCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GSGTLYDLALSHKLSLALLLNAS*GPAASV Trigger: CACAGAAGCTGCCGGGCCTCATGAAGCATTCAACAA...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | AGACATACTGGTTTAAGGCAGTGTGTCCCAAGGGATACTAGCAGAATACTACTGGGGTACTGTTCCAACTaGCGCCAGTTCTTCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RHTGLRQCVPRDTSRILLGYCSN*RQFFQE Trigger: CTCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCC...CAGTAGTATTCTGCTAGTATCCCTTGGGACACACTGCCTTAAACCAGTATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCACCAGAGTTTGTTGAATaGTTCATGAGGCCCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPPEFVE*FMRPGS Trigger: GCTGCCGGGCCTCATGAAGCATTCAACAAACTCTGG...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAAACAGGTTCCATCACCTaGAGTGAAGGCTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISTFRLLPCYWGVILIPETGSIT*SEGSSR Trigger: CCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGT...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAGGGTCCAGAAAGGACTaGCATTCAGCATCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPGSRKD*HSASAL Trigger: CAGTGCTGATGCTGAATGCCAGTCCTTTCTGGACCC...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR TCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGTTCCATCACCTGGAGTaGAGGCTCCTCCAGGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKFHHLE*RLLQVQ Trigger: TTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAA...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | GCTTTCATAATGACACAGGAAAACAAGTGTGGTAGGACTGTAACCGTTACCAGGTCTGTGTACTGGAACTaGCTGAAACGCTGTCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AFIMTQENKCGRTVTVTRSVYWN*LKRCRK Trigger: TTTCCGACAGCGTTTCAGGCAGTTCCAGTACACAGA...CCTGGTAACGGTTACAGTCCTACCACACTTGTTTTCCTGTGTCATTATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAATCCGAGCGAAACATTTaGCACACTGGGGACATCGGT | + |
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Preference number: 4 (lower is better) Translates to: ISTFRLLPCYWGVILIPESERNI*HTGDIG Trigger: ACCGATGTCCCCAGTGTGGCAAATGTTTCGCTCGGA...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | GCTTTCATAATGACACAGGAAAACAAGTGTGGTAGGACTGTAACCGTTACCAGGCTGGTGCAAAGTAAGTaGCGTCAGGCGACTAAAACT | + |
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Preference number: 4 (lower is better) Translates to: AFIMTQENKCGRTVTVTRLVQSK*RQATKT Trigger: AGTTTTAGTCGCCTGACGGCACTTACTTTGCACCAG...CCTGGTAACGGTTACAGTCCTACCACACTTGTTTTCCTGTGTCATTATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR GCA 90 bp | AGACATACTGGTTTAAGGCAGTGTGTCCCAAGGGATACTAGCAGAATACTACTGGTGCATAATAAGGCCTaGTCTCTGCCGGAAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTGLRQCVPRDTSRILLVHNKA*SLPEAF Trigger: AAAAGCTTCCGGCAGAGAGCAGGCCTTATTATGCAC...CAGTAGTATTCTGCTAGTATCCCTTGGGACACACTGCCTTAAACCAGTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAGCAGCTTCTGTGTACTaGAACTGCCTGAAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPAASVY*NCLKRC Trigger: ACAGCGTTTCAGGCAGTTCCAGTACACAGAAGCTGC...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAAGGACTCTTTTTCTTTaGAGGCTTCGGGGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPRTLFL*RLRGER Trigger: CCTCTCACCCCGAAGCCTCCAAAGAAAAAGAGTCCT...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCTGTACTGGAACTGCCTaGAACGCTGTCGGAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLYDLALSHKLSLALFSCTGTA*NAVGKL Trigger: AAGTTTTCCGACAGCGTTTCAGGCAGTTCCAGTACA...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCCTTAGAACGCATCTTTaGCTTCAGCCACTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTLYDLALSHKLSLALFSLRTHL*LQPLTA Trigger: TGCTGTCAGTGGCTGAAGCCAAAGATGCGTTCTAAG...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCTAAAGTGTGTGACCTaGTGCATAATAAGGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGTLYDLALSHKLSLALLKCVT*CIIRPA Trigger: AGCAGGCCTTATTATGCACCAGGTCACACACTTTAG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGCATGGTTCTTCTCTATaGTCCAATGGGAAGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSGTLYDLALSHKLSLALHGSSL*SNGKFM Trigger: CATGAACTTCCCATTGGATCATAGAGAAGAACCATG...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGGGTTCTTCTCCTGAATaGATTCGCTGGTGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKGSSPE*IRWCPV Trigger: TACAGGGCACCAGCGAATTCATTCAGGAGAAGAACC...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGGGATTCTTAAATGAATaGCAAGGCTTGGTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGTLYDLALSHKLSLALGFLNE*QGLVSV Trigger: GACAGAGACCAAGCCTTGTCATTCATTTAAGAATCC...CAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCTTTCATAATGACACAGGAAAACAAGTGTGGTAGGACTGTAACCGTTACCAGGGTCAATCTGTGGTTCTaGTATCTCAAGCTCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFIMTQENKCGRTVTVTRVNLWF*YLKLSL Trigger: CAAAGAGAGCTTGAGATACCAGAACCACAGATTGAC...CCTGGTAACGGTTACAGTCCTACCACACTTGTTTTCCTGTGTCATTATGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAAGTCTTTCTGCAAAATaGGACCATGGAGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPSLSAK*DHGEHS Trigger: GGAATGCTCTCCATGGTCCCATTTTGCAGAAAGACT...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGTCAGAATGGGTTCTCTaGTGCCCAAGAAGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKSEWVL*CPRRCE Trigger: CTCACACCTTCTTGGGCACCAGAGAACCCATTCTGA...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCAGTTTCTTCTTCAGAATaGGTTCTCTGGTGCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPVSSSE*VLWCPR Trigger: TCTTGGGCACCAGAGAACCCATTCTGAAGAAGAAAC...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGTCCGTGTGTGTTCTCTaGTGCAAAGTAAGTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKSVCVL*CKVSAV Trigger: GACGGCACTTACTTTGCACCAGAGAACACACACGGA...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| 3UTR CAA 72 bp | GTCCTACCTATAAACGACTGCCACCGTTTATATGCTTaGTGCTTATGCTTATCATATGGTTGCCTTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VLPINDCHRLYA*CLCLSYGCLGT Trigger: GGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGCAGTCGTTTATAGGTAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR GCA 90 bp | GCTTTCATAATGACACAGGAAAACAAGTGTGGTAGGACTGTAACCGTTACCAGGAGAATAGTTAGGAATTaGTCTAGCACAAGCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFIMTQENKCGRTVTVTRRIVRN*SSTSSS Trigger: GGAACTGCTTGTGCTAGAGCAATTCCTAACTATTCT...CCTGGTAACGGTTACAGTCCTACCACACTTGTTTTCCTGTGTCATTATGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCGTTTATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTTGGAACCATGCAAAATGGGACCATaGAGAGCATTCCCTTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVYMLCAYAYHMVALEPCKMGP*RAFPSK Trigger: TTTAGAAGGGAATGCTCTCCATGGTCCCATTTTGCA...TGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATAAACGGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| 3UTR CAA 72 bp | TGTGTTGACAAAATTCACTGTCTCATTTCTTGCCACTaGGGGCACATCTATCTACTGGCTGCTTTCATAATG | + |
|
Preference number: 4 (lower is better) Translates to: CVDKIHCLISCH*GHIYLLAAFIM Trigger: CATTATGAAAGCAGCCAGTAGATAGATGTGCCCCAAGTGGCAAGAAATGAGACAGTGAATTTTGTCAACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CAA 72 bp | AAAAAGACACATCCTGGCTCTGGCACTTTATATGATTaGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKTHPGSGTLYD*ALSHKLSLALF Trigger: GAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCCAGAGCCAGGATGTGTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR GCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGATAAGGCCTGCTCTCTaGCGGAAGCTTTTAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKIRPAL*RKLLEQ Trigger: TTGTTCTAAAAGCTTCCGGCAGAGAGCAGGCCTTAT...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR CCA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCTTCTCTATGATCCAATaGGAAGTTCATGTCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTLYDLALSHKLSLALFSFSMIQ*EVHVKL Trigger: AAGCTTGACATGAACTTCCCATTGGATCATAGAGAA...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| 3UTR CAA 72 bp | TCCACTTTATTAAAACCGTGTATAAATACAGAGCAGTaGGGCACATCCATTCTAAGGCACTGTTCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: STLLKPCINTEQ*GTSILRHCSGL Trigger: CAAACCAGAACAGTGCCTTAGAATGGATGTGCCCAACTGCTCTGTATTTATACACGGTTTTAATAAAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGTTAAGACTTGACCCATaGCAAAAGGTTTTTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKLRLDP*QKVFPH Trigger: GTGTGGAAAAACCTTTTGTCATGGGTCAAGTCTTAA...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS-3UTR TCA 90 bp | TTGCCTTGGAACCAAACCTTTCCACTGCAATTAAACAACAGAAAAAGACAGAAGGTATGGATTCTTAAATaGATGACAAGGCTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPWNQTFPLQLNNRKRQKVWILK*MTRLGL Trigger: GAGACCAAGCCTTGTCATTCATTTAAGAATCCATAC...CTTCTGTCTTTTTCTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CCA 90 bp | ATCTCTACATTCAGACTCCTCCCATGTTACTGGGGTGTAATTTTAATCCCAGAAATGAATGACAAGGCTTaGTCTCTGTCTAAAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTFRLLPCYWGVILIPEMNDKA*SLSKAF Trigger: AAAAGCTTTAGACAGAGACCAAGCCTTGTCATTCAT...TTCTGGGATTAAAATTACACCCCAGTAACATGGGAGGAGTCTGAATGTAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| 3UTR CAA 72 bp | TATATGCTTTGTGCTTATGCTTATCATATGGTTGCCTaGGAACCAAACCTTTCCACTGCAATTAAACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YMLCAYAYHMVA*EPNLSTAIKQQ Trigger: CTGTTGTTTAATTGCAGTGGAAAGGTTTGGTTCCAAGGCAACCATATGATAAGCATAAGCACAAAGCATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS TCA 90 bp | GGCATCCGGCACCGGAGGCTCCTGAACAGGTTCCATCACCTGGAGTaGAGGCTCCTCCAGGTGCAAGTTGGGTGGCATGGGTACTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIRHRRLLNRFHHLE*RLLQVQVGWHGYCS Trigger: GGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGTTCAGGAGCCTCCGGTGCCGGATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CCA 90 bp | GCATTCAGCATCAGCACTGTAGTTCAGATCCTGGGGGCCAGCTTGTaGAATCCAGGCATCCGGCACCGGAGGCTCCTGAACAGGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFSISTVVQILGASL*NPGIRHRRLLNRFH Trigger: ATGGAACCTGTTCAGGAGCCTCCGGTGCCGGATGCCTGGATTCCACAAGCTGGCCCCCAGGATCTGAACTACAGTGCTGATGCTGAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CCA 90 bp | CCATCACCTGGAGTGAAGGCTCCTCCAGGTGCAAGTTGGGTGGCATaGGTACTGTTCCAACTGGCGCCAGTTCTTCCAAGAGCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPGVKAPPGASWVA*VLFQLAPVLPRACH Trigger: ATGACATGCTCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CCA 90 bp | GAACAGGTTCCATCACCTGGAGTGAAGGCTCCTCCAGGTGCAAGTTaGGTGGCATGGGTACTGTTCCAACTGGCGCCAGTTCTTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EQVPSPGVKAPPGAS*VAWVLFQLAPVLPR Trigger: TCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CCA 90 bp | AGGCTCCTCCAGGTGCAAGTTGGGTGGCATGGGTACTGTTCCAACTaGCGCCAGTTCTTCCAAGAGCATGTCATCCATGTCAATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQVQVGWHGYCSN*RQFFQEHVIHVNLW Trigger: CCACAGATTGACATGGATGACATGCTCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS TCA 90 bp | TCTTCCAGGCTGGGGCTCTCGGGTGTCTCTCCTAGAGTTGGGTTCTaGGGATCTACGAGTTTTGTTAGGTCTGTCTGTAAGTCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRLGLSGVSPRVGF*GSTSFVRSVCKSSG Trigger: CCCAGAGGACTTACAGACAGACCTAACAAAACTCGTAGATCCTCAGAACCCAACTCTAGGAGAGACACCCGAGAGCCCCAGCCTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS-3UTR CAA 90 bp | GGCACTTTATATGATTTGGCACTTAGTCACAAGCTCTCTCTTGCATTGTTCTCCACAACTCTTTCTCTATaGTCTGGGCAGTGTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLYDLALSHKLSLALFSTTLSL*SGQCSL Trigger: GAGGGAACACTGCCCAGACAATAGAGAAAGAGTTGT...GGAGAACAATGCAAGAGAGAGCTTGTGACTAAGTGCCAAATCATATAAAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS TCA 90 bp | CAATCTGTGGTTCTGGTATCTCAAGCTCTCTTTGTAAGTCTTCAATaGGTGACACAACTCTTTCTCTATTGTCTGGGCAGTGTTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSVVLVSQALFVSLQ*VTQLFLYCLGSVPS Trigger: TGAGGGAACACTGCCCAGACAATAGAGAAAGAGTTGTGTCACTCATTGAAGACTTACAAAGAGAGCTTGAGATACCAGAACCACAGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CCA 90 bp | ATGTTTCCCATTGGTTTTCTAACTGCACATAGTCTTTCTGCAAAATaGGACCATGGAGAGCATTCCCTTCTAAAGTTACAACAAATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MFPIGFLTAHSLSAK*DHGEHSLLKLQQMG Trigger: ACCCATTTGTTGTAACTTTAGAAGGGAATGCTCTCCATGGTCCCATTTTGCAGAAAGACTATGTGCAGTTAGAAAACCAATGGGAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS TCA 72 bp | CACCGGAGGCTCCTGAACAGGTTCCATCACCTGGAGTaGAGGCTCCTCCAGGTGCAAGTTGGGTGGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRRLLNRFHHLE*RLLQVQVGWHG Trigger: CCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGTTCAGGAGCCTCCGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS TCA 72 bp | GCTTGTGGAATCCAGGCATCCGGCACCGGAGGCTCCTaGACAGGTTCCATCACCTGGAGTGAAGGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACGIQASGTGGS*TGSITWSEGSS Trigger: GGAGGAGCCTTCACTCCAGGTGATGGAACCTGTTCAGGAGCCTCCGGTGCCGGATGCCTGGATTCCACAAGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CAA 72 bp | AGCATCAGCACTGTAGTTCAGATCCTGGGGGCCAGCTaGTGGAATCCAGGCATCCGGCACCGGAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SISTVVQILGAS*WNPGIRHRRLL Trigger: CAGGAGCCTCCGGTGCCGGATGCCTGGATTCCACAAGCTGGCCCCCAGGATCTGAACTACAGTGCTGATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CAA 90 bp | CTGGCATTCAGCATCAGCACTGTAGTTCAGATCCTGGGGGCCAGCTaGTGGAATCCAGGCATCCGGCACCGGAGGCTCCTGAACAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSISTVVQILGAS*WNPGIRHRRLLNRF Trigger: GAACCTGTTCAGGAGCCTCCGGTGCCGGATGCCTGGATTCCACAAGCTGGCCCCCAGGATCTGAACTACAGTGCTGATGCTGAATGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS TCA 72 bp | TCACAGTCTGTGTCATACTCTTGCAGCACAGAGCCCTaGTTCAAGGAGGCCTGGATTGCACAGCCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SQSVSYSCSTEP*FKEAWIAQPRA Trigger: GGCCCTGGGCTGTGCAATCCAGGCCTCCTTGAATCAGGGCTCTGTGCTGCAAGAGTATGACACAGACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS GCA 72 bp | ACAGGTTCCATCACCTGGAGTGAAGGCTCCTCCAGGTaGAAGTTGGGTGGCATGGGTACTGTTCCAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGSITWSEGSSR*KLGGMGTVPTG Trigger: GCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCCAGGTGATGGAACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CCA 72 bp | GGAGTGAAGGCTCCTCCAGGTGCAAGTTGGGTGGCATaGGTACTGTTCCAACTGGCGCCAGTTCTTCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVKAPPGASWVA*VLFQLAPVLPR Trigger: TCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTGGAGGAGCCTTCACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CCA 72 bp | CAGGTGCAAGTTGGGTGGCATGGGTACTGTTCCAACTaGCGCCAGTTCTTCCAAGAGCATGTCATCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QVQVGWHGYCSN*RQFFQEHVIHV Trigger: GACATGGATGACATGCTCTTGGAAGAACTGGCGCCAGTTGGAACAGTACCCATGCCACCCAACTTGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CAA 72 bp | CTTCCAGGCTGGGGCTCTCGGGTGTCTCTCCTAGAGTaGGGTTCTGAGGATCTACGAGTTTTGTTAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPGWGSRVSLLE*GSEDLRVLLGL Trigger: CAGACCTAACAAAACTCGTAGATCCTCAGAACCCAACTCTAGGAGAGACACCCGAGAGCCCCAGCCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS TCA 72 bp | CATGAGGCCCGGCAGCTTCTGTGTACTGGAACTGCCTaGAACGCTGTCGGAAAACTTCACAGTCTGTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HEARQLLCTGTA*NAVGKLHSLCH Trigger: ATGACACAGACTGTGAAGTTTTCCGACAGCGTTTCAGGCAGTTCCAGTACACAGAAGCTGCCGGGCCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS TCA 72 bp | CTGGGGCTCTCGGGTGTCTCTCCTAGAGTTGGGTTCTaGGGATCTACGAGTTTTGTTAGGTCTGTCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGLSGVSPRVGF*GSTSFVRSVCK Trigger: CTTACAGACAGACCTAACAAAACTCGTAGATCCTCAGAACCCAACTCTAGGAGAGACACCCGAGAGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CAA 90 bp | AGCTCTCTTTGTAAGTCTTCAATGAGTGACACAACTCTTTCTCTATaGTCTGGGCAGTGTTCCCTCACCCAGGTCTCTATTTCTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCKSSMSDTTLSL*SGQCSLTQVSISVG Trigger: GCCCACAGAAATAGAGACCTGGGTGAGGGAACACTGCCCAGACAATAGAGAAAGAGTTGTGTCACTCATTGAAGACTTACAAAGAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
||
| CDS CAA 72 bp | TCTCTCCTAGAGTTGGGTTCTGAGGATCTACGAGTTTaGTTAGGTCTGTCTGTAAGTCCTCTGGGGATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLLELGSEDLRV*LGLSVSPLGMF Trigger: AAACATCCCCAGAGGACTTACAGACAGACCTAACAAAACTCGTAGATCCTCAGAACCCAACTCTAGGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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| CDS CAA 72 bp | TGTAAGTCTTCAATGAGTGACACAACTCTTTCTCTATaGTCTGGGCAGTGTTCCCTCACCCAGGTCTCTATT | + |
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Preference number: 6 (lower is better) Translates to: CKSSMSDTTLSL*SGQCSLTQVSI Trigger: AATAGAGACCTGGGTGAGGGAACACTGCCCAGACAATAGAGAAAGAGTTGTGTCACTCATTGAAGACTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101560.4 |
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