Pregenerated sensors for ZFP445 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047036Ensembl transcript IDs: ENSMUST00000056467.8, ENSMUST00000213971.2, ENSMUST00000214558.2, ENSMUST00000214626.2, ENSMUST00000216063.2, ENSMUST00000216721.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCACACTGAGCTTTATATTCTTTCTGAAGTACCAAACATCTTCTaGATGGTGTGTTCTGCTAACGGCAAACAGGGTTCTGTAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LHTELYILSEVPNIF*MVCSANGKQGSVGP Trigger: GGGACCTACAGAACCCTGTTTGCCGTTAGCAGAACACACCATGCAGAAGATGTTTGGTACTTCAGAAAGAATATAAAGCTCAGTGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 90 bp | TTGTATGCGTGTTTTGTTTGCATGTCTGTGAGCCATGTGCATGTCTaGAGCACACAAAATTCAGGACAGAGCATGGGATTCTCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: LYACFVCMSVSHVHV*STQNSGQSMGFSGI Trigger: AATCCCAGAGAATCCCATGCTCTGTCCTGAATTTTGTGTGCTCCAGACATGCACATGGCTCACAGACATGCAAACAAAACACGCATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 90 bp | TTTAGTGACTTACAGATCCCCAAACAGCAGGGTTTTTGTCTGTTCTaGTCACTGGCACATGAGGAGTGCTCTTGTATCTTAGCTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: FSDLQIPKQQGFCLF*SLAHEECSCILAEM Trigger: CATTTCAGCTAAGATACAAGAGCACTCCTCATGTGCCAGTGACCAGAACAGACAAAAACCCTGCTGTTTGGGGATCTGTAAGTCACTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 90 bp | CTGTCTGTCTTGCAACTCCTAGAGATGTCAATGCCTCCTAACACCTaGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: LSVLQLLEMSMPPNT*SYLVSLSVTLFPGQ Trigger: CTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAGGTGTTAGGAGGCATTGACATCTCTAGGAGTTGCAAGACAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR TCA 90 bp | GTTATTTTTCAACATCTCTTTCCAGAAGGAAGACTGAGAAATTCCTaGGTTTTGAAATCATCAAGATTCCACACCAAGAACATCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: VIFQHLFPEGRLRNS*VLKSSRFHTKNIQA Trigger: GGCTTGGATGTTCTTGGTGTGGAATCTTGATGATTTCAAAACTCAGGAATTTCTCAGTCTTCCTTCTGGAAAGAGATGTTGAAAAATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR GCA 90 bp | TCTTCCACATTCGCTATAATTGTGTATTTTTGTTGTGGTGGTAGTTaGTTGAACAGGATCTTATTATTCGTTATCCCCAAGTGGCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: SSTFAIIVYFCCGGS*LNRILLFVIPKWLY Trigger: GTAAAGCCACTTGGGGATAACGAATAATAAGATCCTGTTCAAGCAACTACCACCACAACAAAAATACACAATTATAGCGAATGTGGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGCCCAAGTGGTCAGGCTaGAGTGACAAGCATAACTGG | + |
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Preference number: 2 (lower is better) Translates to: CPHHHPMRLELHPTYRIRPKWSG*SDKHNW Trigger: CCAGTTATGCTTGTCACTGCAGCCTGACCACTTGGG...CCTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGCCTAACCAGATTCCTTaGCATTCGTCTCTGGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: LSPPPPYEVRTPSHVQNKPNQIP*HSSLDD Trigger: GTCATCCAGAGACGAATGGCAAGGAATCTGGTTAGG...CTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGACTCTATTTATCTAAGGAGACCTaGCTGTCAGAGGCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VKLGPFFRSSSTPPKGLYLSKET*LSEAWA Trigger: AGCCCAGGCCTCTGACAGCCAGGTCTCCTTAGATAA...ATAGAGTCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGATTCAGGACAGAGCATaGGATTCTCTGGGATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: CPHHHPMRLELHPTYRIRIQDRA*DSLGLP Trigger: TGGCAATCCCAGAGAATCCCATGCTCTGTCCTGAAT...CCTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGATAGATGCTAGGAACTaGACCCAGGCAAAGGTAACA | + |
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Preference number: 2 (lower is better) Translates to: CPHHHPMRLELHPTYRIRIDARN*TQAKVT Trigger: TGTTACCTTTGCCTGGGTTCAGTTCCTAGCATCTAT...CCTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCCAAACAGCAGGGTTTTTGTCTGTTCTGGTCACTGGCACATGAGGAGTAAAGGTTTTCCCCAGTaGCTACCACTAAAGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: RSPNSRVFVCSGHWHMRSKGFPQ*LPLKFS Trigger: AGAGAACTTTAGTGGTAGGCACTGGGGAAAACCTTT...ACTCCTCATGTGCCAGTGACCAGAACAGACAAAAACCCTGCTGTTTGGGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCCAAACAGCAGGGTTTTTGTCTGTTCTGGTCACTGGCACATGAGGAGTCAAGCCAAAAAGGACTaGACCTTTACAAAGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RSPNSRVFVCSGHWHMRSQAKKD*TFTKVF Trigger: GAAAACCTTTGTAAAGGTCCAGTCCTTTTTGGCTTG...ACTCCTCATGTGCCAGTGACCAGAACAGACAAAAACCCTGCTGTTTGGGGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACCCAATAGAGCAACATaGCTCAACCCCTCCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIPNRAT*LNPSTP Trigger: GGGGGTGGAGGGGTTGAGCCATGTTGCTCTATTGGG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCAAACAATACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACCCCCCAGGAGACATCTaGTGTAGAATACAAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: MCKQYLCKAWSILQELIYPPGDI*CRIQVL Trigger: TAGAACTTGTATTCTACATCAGATGTCTCCTGGGGG...GTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGTATTGTTTGCACAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGGTCTGTTCTGGTCACTaGCACATGAGGAGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TKGYTRHDIITNVQTIPLVCSGH*HMRSAL Trigger: AAGAGCACTCCTCATGTGCCAGTGACCAGAACAGAC...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCAAACCAATTATAAACTaGAGCCCCAACCAGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSIAYINPFHKFTLLCHAKPIIN*SPNQGP Trigger: GGGCCCCTGGTTGGGGCTTCAGTTTATAATTGGTTT...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAGTTCTCTAGAATGTaGCCAAGAACTATTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: QNKETQTSGSDMSTLNVLKFSRM*PRTIPH Trigger: GTGGGGAATAGTTCTTGGTCACATTCTAGAGAACTT...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGCTGGCACATGAGGAGTaGTCTTGTATCTTAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: TKGYTRHDIITNVQTIPLLAHEE*SCILAE Trigger: TTCAGCTAAGATACAAGAGCACTCCTCATGTGCCAG...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTAGGTTTTTGTCTGTTCTaGTCACTGGCACATGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LVLLSFTVSNIISWTVCLGFCLF*SLAHEE Trigger: CTCCTCATGTGCCAGTGACCAGAACAGACAAAAACC...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGCTTGCCATTCGTCTCTaGATGACTTTGTCCTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: TKGYTRHDIITNVQTIPLLAIRL*MTLSST Trigger: TGTTGAGGACAAAGTCATCCAGAGACGAATGGCAAG...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACCAATGGTTGTGAGCTaGCACATAGATGCTAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIPMVVS*HIDARN Trigger: GTTCCTAGCATCTATGTGGCAGCTCACAACCATTGG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTGCAGCTGTGTACTTTTaGGTACAACTTTCATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: QNKETQTSGSDMSTLNVLAAVYF*VQLSFN Trigger: ATTGAATGAAAGTTGTACTCAAAAGTACACAGCTGC...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCGTACCAAACATCTTCTaGATGGTGTGTTCTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SSIAYINPFHKFTLLCHAVPNIF*MVCSAN Trigger: GTTAGCAGAACACACCATGCAGAAGATGTTTGGTAC...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGAAGAACGTTTCCATTGTGATTTCACTAGCATCTCATACTGAGAGAATAACTGTTGTAGTGAGTTaGCTCGTGTTCATCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: QVKNVSIVISLASHTERITVVVS*LVFIIL Trigger: AAGAATGATGAACACGAGTCAACTCACTACAACAGT...TATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTCTTCACTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATATATGCGTGTTTTGTTTaGATGTCTGTGAGCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIYACFV*MSVSHV Trigger: CACATGGCTCACAGACATGCAAACAAAACACGCATA...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 72 bp | TGCATGTCTGGAGCACACAAAATTCAGGACAGAGCATaGGATTCTCTGGGATTGCCAATGGTTGTGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: CMSGAHKIQDRA*DSLGLPMVVSC Trigger: GCAGCTCACAACCATTGGCAATCCCAGAGAATCCCATGCTCTGTCCTGAATTTTGTGTGCTCCAGACATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR GCA 72 bp | TGTGCTTTCCAGGCCAAGTTCAAGATTAGACAGGGTTaGCAAGACAATCAGAATCTGTCAACTGGCACTCTA | + |
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Preference number: 3 (lower is better) Translates to: CAFQAKFKIRQG*QDNQNLSTGTL Trigger: TAGAGTGCCAGTTGACAGATTCTGATTGTCTTGGCAACCCTGTCTAATCTTGAACTTGGCCTGGAAAGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 72 bp | ATCCACATCCTAACCAGATTCCTTGCCATTCGTCTCTaGATGACTTTGTCCTCAACACATATCACCATCCAA | + |
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Preference number: 3 (lower is better) Translates to: IHILTRFLAIRL*MTLSSTHITIQ Trigger: TTGGATGGTGATATGTGTTGAGGACAAAGTCATCCAGAGACGAATGGCAAGGAATCTGGTTAGGATGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR GCA 72 bp | GAGCTTTATATTCTTTCTGAAGTACCAAACATCTTCTaGATGGTGTGTTCTGCTAACGGCAAACAGGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ELYILSEVPNIF*MVCSANGKQGS Trigger: AGAACCCTGTTTGCCGTTAGCAGAACACACCATGCAGAAGATGTTTGGTACTTCAGAAAGAATATAAAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACAAACAGCAGGGTTTTaGTCTGTTCTGGTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIQTAGF*SVLVTG Trigger: GCCAGTGACCAGAACAGACAAAAACCCTGCTGTTTG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 72 bp | TTGCAACTCCTAGAGATGTCAATGCCTCCTAACACCTaGTCCTACTTAGTTTCACTGTCAGTAACATTATTT | + |
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Preference number: 3 (lower is better) Translates to: LQLLEMSMPPNT*SYLVSLSVTLF Trigger: AAATAATGTTACTGACAGTGAAACTAAGTAGGACCAGGTGTTAGGAGGCATTGACATCTCTAGGAGTTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR TCA 72 bp | GAACGTTTCCATTGTGATTTCACTAGCATCTCATACTaGGAGAATATAGAGCAGTATAGCATACATCAACCC | + |
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Preference number: 3 (lower is better) Translates to: ERFHCDFTSISY*ENIEQYSIHQP Trigger: GGGTTGATGTATGCTATACTGCTCTATATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CCA 72 bp | ACTAACTTCTCTAAGAGATTACTAAGAAAGCCTACATaGTTTCCTCTCTGCACACTGTGGTTTGATATCCTT | + |
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Preference number: 3 (lower is better) Translates to: TNFSKRLLRKPT*FPLCTLWFDIL Trigger: AAGGATATCAAACCACAGTGTGCAGAGAGGAAACCATGTAGGCTTTCTTAGTAATCTCTTAGAGAAGTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | CCTAGCACAGCTTTCCCAAGTGGTCAGGCTGCAGTGACAAGCATAACTGGGAACGAGCAGAACTGTTCTTaGGATGTGATGCAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: PSTAFPSGQAAVTSITGNEQNCS*DVMQGT Trigger: GGTCCCCTGCATCACATCTCAAGAACAGTTCTGCTC...GTTCCCAGTTATGCTTGTCACTGCAGCCTGACCACTTGGGAAAGCTGTGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | TGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGCCTGGCAGTCTGCATTaGAATATAGCCATCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CPHHHPMRLELHPTYRIRPGSLH*NIAILL Trigger: GAGGAGGATGGCTATATTTCAATGCAGACTGCCAGG...CCTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | ACGGAGCCTAGCACCCTGTCCTTTTCACTTGACACTGAGACTACTTTAGGACCAAGCTGTCTAAAGAGCTaGCGGAATAGCTCCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TEPSTLSFSLDTETTLGPSCLKS*RNSSWP Trigger: TGGCCAGGAGCTATTCCGTCAGCTCTTTAGACAGCT...TGGTCCTAAAGTAGTCTCAGTGTCAAGTGAAAAGGACAGGGTGCTAGGCTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | ACGGAGCCTAGCACCCTGTCCTTTTCACTTGACACTGAGACTACTTTAGGACCAGTGCAGACGGTAGGATaGCAAACGTTGGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TEPSTLSFSLDTETTLGPVQTVG*QTLESF Trigger: AAAGCTTTCCAACGTTTGTCATCCTACCGTCTGCAC...TGGTCCTAAAGTAGTCTCAGTGTCAAGTGAAAAGGACAGGGTGCTAGGCTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR GCA 90 bp | ACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGATTTTCCCGCAAGTGCTaGATTTGTGGCAGGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSVKLGPFFRSSSTPPKGFSRKC*ICGRLS Trigger: AGAAAGCCTGCCACAAATGCAGCACTTGCGGGAAAA...TCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGACTCTATGTCACCTCCACATCCTaGAAAGTCAAAGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKLGPFFRSSSTPPKGLYVTSTS*KVKASW Trigger: CCAGGAAGCTTTGACTTTCCAGGATGTGGAGGTGAC...ATAGAGTCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | CCTAGCACAGCTTTCCCAAGTGGTCAGGCTGCAGTGACAAGCATAACTGGGAACGGTGTGAACTTTTTCTaGAGTTTCTGTCATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSTAFPSGQAAVTSITGNGVNFF*SFCHSH Trigger: ATGGCTATGACAGAAACTTCAGAAAAAGTTCACACC...GTTCCCAGTTATGCTTGTCACTGCAGCCTGACCACTTGGGAAAGCTGTGCTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | ACGGAGCCTAGCACCCTGTCCTTTTCACTTGACACTGAGACTACTTTAGGACCAATTCTGAGTAAGACATaGATCCTTCAGTGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TEPSTLSFSLDTETTLGPILSKT*ILQWGS Trigger: GGAACCCCACTGAAGGATCCATGTCTTACTCAGAAT...TGGTCCTAAAGTAGTCTCAGTGTCAAGTGAAAAGGACAGGGTGCTAGGCTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGCGCCCCATGGCTTCCTaGCTTCTAGCCAGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWRPMAS*LLARRS Trigger: TGATCTCCTGGCTAGAAGCCAGGAAGCCATGGGGCG...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR CCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTCGCCCCATGGCTTCCTaGCTTCTAGCCAGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLRPMAS*LLARRS Trigger: TGATCTCCTGGCTAGAAGCCAGGAAGCCATGGGGCG...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | ACGGAGCCTAGCACCCTGTCCTTTTCACTTGACACTGAGACTACTTTAGGACCAGGTTTCTCCTGTGTGTaGATCCTTTGGTGTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: TEPSTLSFSLDTETTLGPGFSCV*ILWCSI Trigger: TATTGAACACCAAAGGATTCACACACAGGAGAAACC...TGGTCCTAAAGTAGTCTCAGTGTCAAGTGAAAAGGACAGGGTGCTAGGCTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGCTTCCTGGTATTCTATaGCCTCTTCTAACTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LSPPPPYEVRTPSHVQNKLPGIL*PLLTGN Trigger: ATTTCCAGTTAGAAGAGGGCATAGAATACCAGGAAG...CTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAAGATCAGAGCAGGTTTaGGAGAGGAGCCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWRRSEQV*ERSPPQ Trigger: CTGTGGTGGGCTCCTCTCCCAAACCTGCTCTGATCT...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAGATCAGAGCAGGTTTaGGAGAGGAGCCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLRSEQV*ERSPPQ Trigger: CTGTGGTGGGCTCCTCTCCCAAACCTGCTCTGATCT...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | CCTAGCACAGCTTTCCCAAGTGGTCAGGCTGCAGTGACAAGCATAACTGGGAACCCCACAATTCTGACATaGAAAAGTTTTCTCTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTAFPSGQAAVTSITGNPTILT*KSFLYS Trigger: ACTGTAGAGAAAACTTTTCCATGTCAGAATTGTGGG...GTTCCCAGTTATGCTTGTCACTGCAGCCTGACCACTTGGGAAAGCTGTGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | ATCACAAACAGCAAGAATTATCTAAGGAGACCTGGCTGTCAGAGGCCTGGGCTATTGCTGTGTTTTCTCTaGTCAACAGAACGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ITNSKNYLRRPGCQRPGLLLCFL*STERAC Trigger: ACATGCCCGTTCTGTTGACCAGAGAAAACACAGCAA...TAGCCCAGGCCTCTGACAGCCAGGTCTCCTTAGATAATTCTTGCTGTTTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | ATCACAAACAGCAAGAATTATCTAAGGAGACCTGGCTGTCAGAGGCCTGGGCTAAGGCTTTCTTCTTGGTaGGCACATTCTGGAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITNSKNYLRRPGCQRPGLRLSSW*AHSGMQ Trigger: TTGCATTCCAGAATGTGCCCACCAAGAAGAAAGCCT...TAGCCCAGGCCTCTGACAGCCAGGTCTCCTTAGATAATTCTTGCTGTTTGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAAGCTGTCTAAAGAGCTaGCGGAATAGCTCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWRSCLKS*RNSSWP Trigger: TGGCCAGGAGCTATTCCGTCAGCTCTTTAGACAGCT...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR TCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAGAGCAGAACTGTTCTTaGGATGTGATGCAGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWREQNCS*DVMQGT Trigger: GGTCCCCTGCATCACATCTCAAGAACAGTTCTGCTC...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR GCA 90 bp | ATGTGCAAACAATACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACCTTTCCCACACACCCTaGATTGAAACAGGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MCKQYLCKAWSILQELIYLSHTP*IETGPL Trigger: AAGAGGGCCTGTTTCAATGCAGGGTGTGTGGGAAAG...GTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGTATTGTTTGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | ATGTGCAAACAATACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACCTCTTCACTGTAGCTTaGCTGCCGATGTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MCKQYLCKAWSILQELIYLFTVA*LPMFRM Trigger: CATCCTGAACATCGGCAGCCAAGCTACAGTGAAGAG...GTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGTATTGTTTGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | ATCACAAACAGCAAGAATTATCTAAGGAGACCTGGCTGTCAGAGGCCTGGGCTATTGGTGGGCACATTCTaGAATGCAATTGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITNSKNYLRRPGCQRPGLLVGTF*NAIDLE Trigger: TTCCAAGTCAATTGCATTCCAGAATGTGCCCACCAA...TAGCCCAGGCCTCTGACAGCCAGGTCTCCTTAGATAATTCTTGCTGTTTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGACCTGGCAGTCTGCATTaGAATATAGCCATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWRPGSLH*NIAILL Trigger: GAGGAGGATGGCTATATTTCAATGCAGACTGCCAGG...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTATGCCAGCTCTTCCTTaGGGTCTCTCCATATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLMPALP*GLSISV Trigger: GACAGATATGGAGAGACCTCAAGGAAGAGCTGGCAT...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCAAACAGCAGGGTTTTTGTCTGTTCTGGTCACTGGCACATGAGGAGTCTGGTGCTCAATGAGTaGTTTCTTTTGAGTAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPNSRVFVCSGHWHMRSLVLNE*FLLSKS Trigger: ACTTTTACTCAAAAGAAATCACTCATTGAGCACCAG...ACTCCTCATGTGCCAGTGACCAGAACAGACAAAAACCCTGCTGTTTGGGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGGTCACCTCCACATCCTaGAAAGTCAAAGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWVTSTS*KVKASW Trigger: CCAGGAAGCTTTGACTTTCCAGGATGTGGAGGTGAC...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCGACTACCCCGAGGAATaGGAAACACTGCACCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSIAYINPFHKFTLLCHADYPEE*ETLHPD Trigger: GTCAGGGTGCAGTGTTTCCCATTCCTCGGGGTAGTC...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTGGCAGGCTTTCTTCTTaGTGGGCACATTCTGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLGRLSS*WAHSGM Trigger: CATTCCAGAATGTGCCCACCAAGAAGAAAGCCTGCC...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| 3UTR CAA 72 bp | GAAAGCCTACATGGTTTCCTCTCTGCACACTGTGGTTaGATATCCTTCAGTAAGGATGTAACTGACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: ESLHGFLSAHCG*ISFSKDVTDHT Trigger: AGTGTGGTCAGTTACATCCTTACTGAAGGATATCAAACCACAGTGTGCAGAGAGGAAACCATGTAGGCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACCACACACCCTGCATTaGAACAGGCCCTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIPHTLH*NRPSSL Trigger: CAGTGAAGAGGGCCTGTTTCAATGCAGGGTGTGTGG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGATGTGAAGTCTCCAAGTaGTCCTCTAGAGCAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWRCEVSK*SSRAEL Trigger: CAGTTCTGCTCTAGAGGACCACTTGGAGACTTCACA...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCTGCCGATGTTCAGGATaGGCATGCCAGCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSIAYINPFHKFTLLCHACRCSG*ACQLFL Trigger: AAGGAAGAGCTGGCATGCCCATCCTGAACATCGGCA...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| 3UTR CAA 72 bp | TCAGTAATTGGGCTCGTACCTAGCAGCTGTGTACTTTaGAGTACAACTTTCATTCAATACTGGACTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVIGLVPSSCVL*STTFIQYWTQG Trigger: GCCTTGAGTCCAGTATTGAATGAAAGTTGTACTCAAAAGTACACAGCTGCTAGGTACGAGCCCAATTACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGTGCACATCTGGATTCTaGGTAAGACATGGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWCTSGF*VRHGSF Trigger: GAAGGATCCATGTCTTACTCAGAATCCAGATGTGCA...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR TCA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTATCTCTTCCTGTCCTTTaGCTAATGTCGGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSFTVSNIISWTVCLSLPVL*LMSAPS Trigger: GGAAGGAGCCGACATTAGTCAAAGGACAGGAAGAGA...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGATTCTGAGTAAGACATaGATCCTTCAGTGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWILSKT*ILQWGS Trigger: GGAACCCCACTGAAGGATCCATGTCTTACTCAGAAT...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR CCA 90 bp | CACATTAGGATTAGAGTGTGTTCCTCCACACTGAGCTTTATATTCTTTCTGAAGGATGTCGGTAGAGATTaGAACTCCATCGGAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIRIRVCSSTLSFIFFLKDVGRD*NSIGRL Trigger: AAGCCTTCCGATGGAGTTCCAATCTCTACCGACATC...CTTCAGAAAGAATATAAAGCTCAGTGTGGAGGAACACACTCTAATCCTAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGTGTCTCAGGACTTACTaGTGTCTTTACACAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKGYTRHDIITNVQTIPLCLRTY*CLYTGF Trigger: GAAGCCTGTGTAAAGACATCAGTAAGTCCTGAGACA...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCCATCCAAGCTGCAGGTaGGGGCATTTTTGTACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSIAYINPFHKFTLLCHAHPSCR*GHFCTY Trigger: GTAAGTACAAAAATGCCCTCACCTGCAGCTTGGATG...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | CACATTAGGATTAGAGTGTGTTCCTCCACACTGAGCTTTATATTCTTTCTGAAGCACACACTATGCATTTaGAGGGCCTCTCTTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HIRIRVCSSTLSFIFFLKHTLCI*RASLLC Trigger: ACACAAAAGAGAGGCCCTTCAAATGCATAGTGTGTG...CTTCAGAAAGAATATAAAGCTCAGTGTGGAGGAACACACTCTAATCCTAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGAAGAACGTTTCCATTGTGATTTCACTAGCATCTCATACTGAGAGAATAAATTGGAAGACCACCTaGAGGTCTTCCCACACACTA | + |
|
Preference number: 4 (lower is better) Translates to: QVKNVSIVISLASHTERINWKTT*RSSHTL Trigger: TAGTGTGTGGGAAGACCTTCAGGTGGTCTTCCAATT...TATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTCTTCACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR GCA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAAAGATGCTCAGGAATTaGTCCAAGACCAACAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFIVDKRDSITRGRYIWRKMLRN*SKTNNS Trigger: AGAGTTGTTGGTCTTGGAGCAATTCCTGAGCATCTT...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR GCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAGATGCTCAGGAATTaGTCCAAGACCAACAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLKMLRN*SKTNNS Trigger: AGAGTTGTTGGTCTTGGAGCAATTCCTGAGCATCTT...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | AGCAGTATAGCATACATCAACCCATTTCATAAGTTTACACTCTTATGTCATGCCTTGTTTGGCTTAATCTaGAGCTTACCTCCTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIAYINPFHKFTLLCHALFGLI*SLPPSG Trigger: GCCTGAAGGAGGTAAGCTTCAGATTAAGCCAAACAA...GGCATGACATAAGAGTGTAAACTTATGAAATGGGTTGATGTATGCTATACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTGAACTCTCTCATGAATaGGAAGAAATGAGCGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLELSHE*EEMSDC Trigger: ACAATCGCTCATTTCTTCTCATTCATGAGAGAGTTC...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGCTTCCTGGTATTCTATaGCCTCTTCTAACTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWLPGIL*PLLTGN Trigger: ATTTCCAGTTAGAAGAGGGCATAGAATACCAGGAAG...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR GCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACAGACTGCAGCGTGTTaGTGTGTTTTCTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIQTAAC*CVFSGQ Trigger: TTGACCAGAGAAAACACAGCAACACGCTGCAGTCTG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGTATCCAATGCACATCTaGATTCTGAGTAAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RKFIVDKRDSITRGRYIWYPMHI*ILSKTW Trigger: CCATGTCTTACTCAGAATCCAGATGTGCATTGGATA...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
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| CDS-3UTR CCA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTTATCCAATGCACATCTaGATTCTGAGTAAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: QNKETQTSGSDMSTLNVLYPMHI*ILSKTW Trigger: CCATGTCTTACTCAGAATCCAGATGTGCATTGGATA...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACAAGTGCTGCATTTGTaGCAGGCTTTCTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIQVLHL*QAFFLV Trigger: CACCAAGAAGAAAGCCTGCCACAAATGCAGCACTTG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| 3UTR CAA 72 bp | TCTTATTATTCGTTATCCCCAAGTGGCTTTACACTTTaGGTCCTCTTGCTTTGGCATCCCACATTAGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SYYSLSPSGFTL*VLLLWHPTLGL Trigger: TAATCCTAATGTGGGATGCCAAAGCAAGAGGACCAAAAGTGTAAAGCCACTTGGGGATAACGAATAATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGCACCAAAAGGGCTTCTaGTCAATGAGAATTTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKGYTRHDIITNVQTIPLHQKGF*SMRIFD Trigger: GTCAAAAATTCTCATTGATCAGAAGCCCTTTTGGTG...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATAAGGCCATATTCAGACTaGAGCGTGTTGCTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQTSGSDMSTLNVLKIHIRPYSD*SVLLCF Trigger: AAAACACAGCAACACGCTGCAGTCTGAATATGGCCT...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGAAGAACGTTTCCATTGTGATTTCACTAGCATCTCATACTGAGAGAATATCTCTTTCATTTGTATaGAGTCTCCACAGGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVKNVSIVISLASHTERISLSFV*SLHRTS Trigger: AGACGTCCTGTGGAGACTCCATACAAATGAAAGAGA...TATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTCTTCACTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTACTTTCTCACATAAGCTaGATTGGTAAGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSFTVSNIISWTVCLLSHIS*IGKVSL Trigger: GAGTGAAACCTTACCAATGCAGCTTATGTGAGAAAG...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGAAGAACGTTTCCATTGTGATTTCACTAGCATCTCATACTGAGAGAATAAGGGCTTCTGATCAATaGGAATTTTTGACTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVKNVSIVISLASHTERIRASDQ*EFLTVD Trigger: ATCTACAGTCAAAAATTCTCATTGATCAGAAGCCCT...TATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTCTTCACTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTAACATGGTTTTTCATATaGCGAGTCAAATTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSFTVSNIISWTVCLTWFFI*RVKLED Trigger: GTCTTCCAATTTGACTCGGCATATGAAAAACCATGT...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTACAAGATGAATTTGTTTaGCTTAATCTGAAGCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLSFTVSNIISWTVCLQDEFV*LNLKLT Trigger: GGTAAGCTTCAGATTAAGCCAAACAAATTCATCTTG...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS TCA 90 bp | TCAACCTGCTCTACTTCAGGCGCAGCATCAGCATCTCTCTTAAGCTaGACCGTGCAGATGTTCACGCCCCATGGCTTCCTGGCTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: STCSTSGAASASLLS*TVQMFTPHGFLASS Trigger: GCTAGAAGCCAGGAAGCCATGGGGCGTGAACATCTGCACGGTTCAGCTTAAGAGAGATGCTGATGCTGCGCCTGAAGTAGAGCAGGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGCCCACACACCCTGCATaGAAACAGGCCCTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPPYEVRTPSHVQNKPTHPA*KQALFT Trigger: AGTGAAGAGGGCCTGTTTCAATGCAGGGTGTGTGGG...CTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS TCA 90 bp | CTCCTGGCCAGGGCGGTTAAGTGTCTGTGGCCTGGCAGTCTGCATTaGAATATAGCCATCCTCCTCCTCTTCTTTTACCATTCGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLARAVKCLWPGSLH*NIAILLLFFYHSKA Trigger: TGCCTTCGAATGGTAAAAGAAGAGGAGGAGGATGGCTATATTTCAATGCAGACTGCCAGGCCACAGACACTTAACCGCCCTGGCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056467.8 ENSMUST00000214558.2 ENSMUST00000214626.2 ENSMUST00000216063.2 ENSMUST00000216721.2 |
||
| CDS TCA 90 bp | TTCCATGTGAAGTCTCCAAGTGGTCCTCTAGAGCAGAACTGTTCTTaGGATGTGATGCAGGGGACCATATCTGTGCGGGCTGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FHVKSPSGPLEQNCS*DVMQGTISVRAAEH Trigger: GTGCTCTGCAGCCCGCACAGATATGGTCCCCTGCATCACATCTCAAGAACAGTTCTGCTCTAGAGGACCACTTGGAGACTTCACATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS CCA 90 bp | TATCCAATGCACATCTGGATTCTGAGTAAGACATGGATCCTTCAGTaGGGTTCCATCAAGATCCCTCTGCAGCTCTTCCAGCAGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YPMHIWILSKTWILQ*GSIKIPLQLFQQGH Trigger: GTGGCCCTGCTGGAAGAGCTGCAGAGGGATCTTGATGGAACCCCACTGAAGGATCCATGTCTTACTCAGAATCCAGATGTGCATTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGCCTGGCAGTCTGCATaGAAATATAGCCATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPPYEVRTPSHVQNKAWQSA*KYSHPP Trigger: AGGAGGATGGCTATATTTCAATGCAGACTGCCAGGC...CTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGGTCAGACTGCAGCGTGTaGCTGTGTTTTCTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPHHHPMRLELHPTYRIRSDCSV*LCFLWS Trigger: TGACCAGAGAAAACACAGCAACACGCTGCAGTCTGA...CCTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS CCA 90 bp | TATCTGTGCGGGCTGCAGAGCACTAGTGCCTATCCAATGCACATCTaGATTCTGAGTAAGACATGGATCCTTCAGTGGGGTTCCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLCGLQSTSAYPMHI*ILSKTWILQWGSIK Trigger: CTTGATGGAACCCCACTGAAGGATCCATGTCTTACTCAGAATCCAGATGTGCATTGGATAGGCACTAGTGCTCTGCAGCCCGCACAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS TCA 90 bp | AGAAGGTCACCTCCACATCCTGGAAAGTCAAAGCTTCCTGCAGCTTaGTTACCAAAGGCTTGCTGGCTGTTACCTGGTATTCTATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSPPHPGKSKLPAA*LPKACWLLPGILCP Trigger: AGGGCATAGAATACCAGGTAACAGCCAGCAAGCCTTTGGTAATCAAGCTGCAGGAAGCTTTGACTTTCCAGGATGTGGAGGTGACCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213971.2 |
||
| CDS CCA 90 bp | AGCACTAGTGCCTATCCAATGCACATCTGGATTCTGAGTAAGACATaGATCCTTCAGTGGGGTTCCATCAAGATCCCTCTGCAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STSAYPMHIWILSKT*ILQWGSIKIPLQLF Trigger: GAAGAGCTGCAGAGGGATCTTGATGGAACCCCACTGAAGGATCCATGTCTTACTCAGAATCCAGATGTGCATTGGATAGGCACTAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS CCA 90 bp | TCAGCCAGGACGTCACAAATTCCTATTCCATGTGAAGTCTCCAAGTaGTCCTCTAGAGCAGAACTGTTCTTGAGATGTGATGCAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SARTSQIPIPCEVSK*SSRAELFLRCDAGD Trigger: GTCCCCTGCATCACATCTCAAGAACAGTTCTGCTCTAGAGGACCACTTGGAGACTTCACATGGAATAGGAATTTGTGACGTCCTGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGACAAGATGCTCAGGAATaGCTCCAAGACCAACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: TSVKLGPFFRSSSTPPKGQDAQE*LQDQQL Trigger: GAGTTGTTGGTCTTGGAGCAATTCCTGAGCATCTTG...TCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGACTCAGGGCAATGGAGTaGGACCCATGTCCGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KFIVDKRDSITRGRYIWRLRAME*DPCPEL Trigger: GAGCTCCGGACATGGGTCCAACTCCATTGCCCTGAG...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGAATATGCCGAGTCAAATaGGAAGACCACCTGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSVKLGPFFRSSSTPPKGICRVK*EDHLKV Trigger: GACCTTCAGGTGGTCTTCCAATTTGACTCGGCATAT...TCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS GCA 90 bp | AGCCAGGCTTATCTGAATGTAGGCCATATTCAGACTGCAGCGTGTTaGTGTGTTTTCTCTGGTCAACAGAACGGGCATGTATCCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SQAYLNVGHIQTAAC*CVFSGQQNGHVSQQ Trigger: TTGTTGGGATACATGCCCGTTCTGTTGACCAGAGAAAACACAGCAACACGCTGCAGTCTGAATATGGCCTACATTCAGATAAGCCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAGAGATCAGAGCAGGTTaGGGAGAGGAGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: KFIVDKRDSITRGRYIWREIRAG*GEEPTT Trigger: TGTGGTGGGCTCCTCTCCCAAACCTGCTCTGATCTC...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | CAGAATAAGGAAACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTGAGATCAGAGCAGGTTaGGGAGAGGAGCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QNKETQTSGSDMSTLNVLEIRAG*GEEPTT Trigger: TGTGGTGGGCTCCTCTCCCAAACCTGCTCTGATCTC...AAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGTTTCCTTATTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCACCACCACCCTATGAGGTTAGAACTCCATCCCACGTACAGAATAAGCATTCTGGAATGCAATaGACTTGGAACTCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPPYEVRTPSHVQNKHSGMQ*TWNSHQ Trigger: CTGATGAGAGTTCCAAGTCAATTGCATTCCAGAATG...CTTATTCTGTACGTGGGATGGAGTTCTAACCTCATAGGGTGGTGGTGGGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGACTCTATTCTCCTCAGAAACACTaGTCTCAGGACTTACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VKLGPFFRSSSTPPKGLYSPQKH*SQDLLM Trigger: CATCAGTAAGTCCTGAGACAAGTGTTTCTGAGGAGA...ATAGAGTCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGCAAACAATACCTCTGTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACATCACGCCACTGTGGTaGCTCTGTAGTGTGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: MCKQYLCKAWSILQELIYITPLW*LCSVDP Trigger: AGGATCCACACTACAGAGCAACCACAGTGGCGTGAT...GTAGATGAGCTCCTGAAGAATGGACCAAGCTTTACAGAGGTATTGTTTGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | GTAAAGCTTGGTCCATTCTTCAGGAGCTCATCTACTCCACCCAAGGGACTCTATTGGAATGCAATTGACTaGGAACTCTCATCAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VKLGPFFRSSSTPPKGLYWNAID*ELSSEG Trigger: CCCTTCTGATGAGAGTTCCAAGTCAATTGCATTCCA...ATAGAGTCCCTTGGGTGGAGTAGATGAGCTCCTGAAGAATGGACCAAGCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS CCA 90 bp | GAATGTAGGCCATATTCAGACTGCAGCGTGTTGCTGTGTTTTCTCTaGTCAACAGAACGGGCATGTATCCCAACAAAATCTTTATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: ECRPYSDCSVLLCFL*STERACIPTKSLSR Trigger: GCGTGATAAAGATTTTGTTGGGATACATGCCCGTTCTGTTGACCAGAGAAAACACAGCAACACGCTGCAGTCTGAATATGGCCTACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAGCCTGGCAGTCTGCATaGAAATATAGCCATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KFIVDKRDSITRGRYIWRAWQSA*KYSHPP Trigger: AGGAGGATGGCTATATTTCAATGCAGACTGCCAGGC...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGAGAAGAGCAGAACTGTTCTaGAGATGTGATGCAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KFIVDKRDSITRGRYIWRRAELF*RCDAGD Trigger: GTCCCCTGCATCACATCTCAAGAACAGTTCTGCTCT...TCTCCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTACGGTTTGAACGCCACTaGAACGCTTTCCCACACACC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLSFTVSNIISWTVCLRFERH*NAFPHT Trigger: GGTGTGTGGGAAAGCGTTCAAGTGGCGTTCAAACCG...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGTTTATTGTAGATAAAAGGGACAGCATAACCAGGGGCAGATACATCTGGCAAGATGCTCAGGAATaGCTCCAAGACCAACAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RKFIVDKRDSITRGRYIWQDAQE*LQDQQL Trigger: GAGTTGTTGGTCTTGGAGCAATTCCTGAGCATCTTG...CCAGATGTATCTGCCCCTGGTTATGCTGTCCCTTTTATCTACAATAAACTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS-3UTR CAA 90 bp | CACATTAGGATTAGAGTGTGTTCCTCCACACTGAGCTTTATATTCTTTCTGAAGAGAGCAGAACTGTTCTaGAGATGTGATGCAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HIRIRVCSSTLSFIFFLKRAELF*RCDAGD Trigger: GTCCCCTGCATCACATCTCAAGAACAGTTCTGCTCT...CTTCAGAAAGAATATAAAGCTCAGTGTGGAGGAACACACTCTAATCCTAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTACTTAGTTTCACTGTCAGTAACATTATTTCCTGGACAGTTTGTTTATGGCAGGCTTTCTTCTaGGTGGGCACATTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLSFTVSNIISWTVCLWQAFF*VGTFWN Trigger: ATTCCAGAATGTGCCCACCAAGAAGAAAGCCTGCCA...TAAACAAACTGTCCAGGAAATAATGTTACTGACAGTGAAACTAAGTAGGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CACATTAGGATTAGAGTGTGTTCCTCCACACTGAGCTTTATATTCTTTCTGAAGCCACACACTATGCATTaGAAGGGCCTCTCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HIRIRVCSSTLSFIFFLKPHTMH*KGLSFV Trigger: CACAAAAGAGAGGCCCTTCAAATGCATAGTGTGTGG...CTTCAGAAAGAATATAAAGCTCAGTGTGGAGGAACACACTCTAATCCTAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS TCA 90 bp | TTCTTTGAGCCCTGTCTCCTCAGAAACACTTGTCTCAGGACTTACTaGTGTCTTTACACAGGCTTCTATGTATTCAGAAGGTTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFEPCLLRNTCLRTY*CLYTGFYVFRRFLF Trigger: AAACAGAAACCTTCTGAATACATAGAAGCCTGTGTAAAGACATCAGTAAGTCCTGAGACAAGTGTTTCTGAGGAGACAGGGCTCAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CACATTAGGATTAGAGTGTGTTCCTCCACACTGAGCTTTATATTCTTTCTGAAGTGTTTAAAAGATTCTTaGAGCCCTGTCTCCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIRIRVCSSTLSFIFFLKCLKDS*SPVSSE Trigger: TTCTGAGGAGACAGGGCTCAAAGAATCTTTTAAACA...CTTCAGAAAGAATATAAAGCTCAGTGTGGAGGAACACACTCTAATCCTAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGGCTATACCAGACACGACATTATAACTAATGTGCAAACAATACCTCTGCGATACTTATACCGCTaGTGCAAAAAGTGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TKGYTRHDIITNVQTIPLRYLYR*CKKCFL Trigger: GAGAAAACACTTTTTGCACAAGCGGTATAAGTATCG...CAGAGGTATTGTTTGCACATTAGTTATAATGTCGTGTCTGGTATAGCCCTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAAACCAGTGGAAGTGATATGAGCACTTTGAATGTGCTTAAAATTCATATACTGTGTGTGAATCCTTaGGTGTTCAATAGCATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQTSGSDMSTLNVLKIHILCVNP*VFNSIG Trigger: TCCTATGCTATTGAACACCAAAGGATTCACACACAG...TATATGAATTTTAAGCACATTCAAAGTGCTCATATCACTTCCACTGGTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGAAGAACGTTTCCATTGTGATTTCACTAGCATCTCATACTGAGAGAATACTGCTTGAAGTCTTCTaGACGTTTCTCTTGTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: QVKNVSIVISLASHTERILLEVF*TFLLFI Trigger: TATAAACAAGAGAAACGTCAAGAAGACTTCAAGCAG...TATTCTCTCAGTATGAGATGCTAGTGAAATCACAATGGAAACGTTCTTCACTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216063.2 |
||
| CDS TCA 72 bp | TTTACCATTCGAAGGCAGCCTTGTTCCCTTGACACCTaGGCTGAGCGGGCAGCATGCCACCTGCCTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FTIRRQPCSLDT*AERAACHLPGG Trigger: GCCTCCAGGCAGGTGGCATGCTGCCCGCTCAGCTCAGGTGTCAAGGGAACAAGGCTGCCTTCGAATGGTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000056467.8 ENSMUST00000214558.2 ENSMUST00000214626.2 ENSMUST00000216063.2 ENSMUST00000216721.2 |
||
| CDS CAA 90 bp | CATCCTCCTCCTCTTCTTTTACCATTCGAAGGCAGCCTTGTTCCCTaGACACCTGAGCTGAGCGGGCAGCATGCCACCTGCCTGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPPLLLPFEGSLVP*TPELSGQHATCLEA Trigger: TGCCTCCAGGCAGGTGGCATGCTGCCCGCTCAGCTCAGGTGTCAAGGGAACAAGGCTGCCTTCGAATGGTAAAAGAAGAGGAGGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056467.8 ENSMUST00000214558.2 ENSMUST00000214626.2 ENSMUST00000216063.2 ENSMUST00000216721.2 |
||
| CDS TCA 72 bp | CCTCCTTCAGGCGCAGCATCAGCATCTCTCTTAAGCTaGACCGTGCAGATGTTCACGCCCCATGGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPSGAASASLLS*TVQMFTPHGFL Trigger: CAGGAAGCCATGGGGCGTGAACATCTGCACGGTTCAGCTTAAGAGAGATGCTGATGCTGCGCCTGAAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
||
| CDS CAA 72 bp | CCTCTTCTTTTACCATTCGAAGGCAGCCTTGTTCCCTaGACACCTGAGCTGAGCGGGCAGCATGCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLLPFEGSLVP*TPELSGQHATC Trigger: GCAGGTGGCATGCTGCCCGCTCAGCTCAGGTGTCAAGGGAACAAGGCTGCCTTCGAATGGTAAAAGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056467.8 ENSMUST00000214558.2 ENSMUST00000214626.2 ENSMUST00000216063.2 ENSMUST00000216721.2 |
||
| CDS CCA 72 bp | CACCCTGCATTGAAACAGGCCCTCTTCACTGTAGCTTaGCTGCCGATGTTCAGGATGGGCATGCCAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HPALKQALFTVA*LPMFRMGMPAL Trigger: AAGAGCTGGCATGCCCATCCTGAACATCGGCAGCCAAGCTACAGTGAAGAGGGCCTGTTTCAATGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
||
| CDS TCA 72 bp | TCTACTTCAGGCGCAGCATCAGCATCTCTCTTAAGCTaGACCGTGCAGATGTTCACGCCCCATGGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: STSGAASASLLS*TVQMFTPHGFL Trigger: CAGGAAGCCATGGGGCGTGAACATCTGCACGGTTCAGCTTAAGAGAGATGCTGATGCTGCGCCTGAAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214626.2 |
||
| CDS GCA 72 bp | TTGAGATGTGATGCAGGGGACCATATCTGTGCGGGCTaGAGAGCACTAGTGCCTATCCAATGCACATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRCDAGDHICAG*RALVPIQCTSG Trigger: TCCAGATGTGCATTGGATAGGCACTAGTGCTCTGCAGCCCGCACAGATATGGTCCCCTGCATCACATCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS CAA 90 bp | ATTCCATGTGAAGTCTCCAAGTGGTCCTCTAGAGCAGAACTGTTCTaGAGATGTGATGCAGGGGACCATATCTGTGCGGGCTGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IPCEVSKWSSRAELF*RCDAGDHICAGCRA Trigger: TGCTCTGCAGCCCGCACAGATATGGTCCCCTGCATCACATCTCAAGAACAGTTCTGCTCTAGAGGACCACTTGGAGACTTCACATGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS CCA 72 bp | GGGCTGCAGAGCACTAGTGCCTATCCAATGCACATCTaGATTCTGAGTAAGACATGGATCCTTCAGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLQSTSAYPMHI*ILSKTWILQWG Trigger: ACCCCACTGAAGGATCCATGTCTTACTCAGAATCCAGATGTGCATTGGATAGGCACTAGTGCTCTGCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
||
| CDS CAA 90 bp | GAGAAGGTCACCTCCACATCCTGGAAAGTCAAAGCTTCCTGCAGCTaGATTACCAAAGGCTTGCTGGCTGTTACCTGGTATTCTATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EKVTSTSWKVKASCS*ITKGLLAVTWYSMP Trigger: GGGCATAGAATACCAGGTAACAGCCAGCAAGCCTTTGGTAATCAAGCTGCAGGAAGCTTTGACTTTCCAGGATGTGGAGGTGACCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213971.2 |
||
| CDS CAA 72 bp | GCTGCCGATGTTCAGGATGGGCATGCCAGCTCTTCCTaGAGGTCTCTCCATATCTGTCCTTTCCATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: AADVQDGHASSS*RSLHICPFHFL Trigger: AAGAAAATGGAAAGGACAGATATGGAGAGACCTCAAGGAAGAGCTGGCATGCCCATCCTGAACATCGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | TGTAAGTGTTTCCTCTCATCCCGGTCTGTCAAATGGTaGCTGACATCCAAGCTGCAGGTGAGGGCATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CKCFLSSRSVKW*LTSKLQVRAFL Trigger: CAAAAATGCCCTCACCTGCAGCTTGGATGTCAGTCACCATTTGACAGACCGGGATGAGAGGAAACACTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | CCTCCACATCCTGGAAAGTCAAAGCTTCCTGCAGCTTaGTTACCAAAGGCTTGCTGGCTGTTACCTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: PPHPGKSKLPAA*LPKACWLLPGI Trigger: AATACCAGGTAACAGCCAGCAAGCCTTTGGTAATCAAGCTGCAGGAAGCTTTGACTTTCCAGGATGTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213971.2 |
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| CDS CCA 72 bp | GCCTATCCAATGCACATCTGGATTCTGAGTAAGACATaGATCCTTCAGTGGGGTTCCATCAAGATCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AYPMHIWILSKT*ILQWGSIKIPL Trigger: CAGAGGGATCTTGATGGAACCCCACTGAAGGATCCATGTCTTACTCAGAATCCAGATGTGCATTGGATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
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| CDS CAA 90 bp | ACATCCTGGAAAGTCAAAGCTTCCTGCAGCTTGATTACCAAAGGCTaGCTGGCTGTTACCTGGTATTCTATGCCCTCTTCTAACTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TSWKVKASCSLITKG*LAVTWYSMPSSNWK Trigger: TTTCCAGTTAGAAGAGGGCATAGAATACCAGGTAACAGCCAGCAAGCCTTTGGTAATCAAGCTGCAGGAAGCTTTGACTTTCCAGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213971.2 |
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| CDS GCA 72 bp | TATCTGAATGTAGGCCATATTCAGACTGCAGCGTGTTaGTGTGTTTTCTCTGGTCAACAGAACGGGCATGTA | + |
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Preference number: 6 (lower is better) Translates to: YLNVGHIQTAAC*CVFSGQQNGHV Trigger: TACATGCCCGTTCTGTTGACCAGAGAAAACACAGCAACACGCTGCAGTCTGAATATGGCCTACATTCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS GCA 72 bp | AAGCCAGGCTTATCTGAATGTAGGCCATATTCAGACTaGAGCGTGTTGCTGTGTTTTCTCTGGTCAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: KPGLSECRPYSD*SVLLCFLWSTE Trigger: TTCTGTTGACCAGAGAAAACACAGCAACACGCTGCAGTCTGAATATGGCCTACATTCAGATAAGCCTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CCA 72 bp | CCATATTCAGACTGCAGCGTGTTGCTGTGTTTTCTCTaGTCAACAGAACGGGCATGTATCCCAACAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: PYSDCSVLLCFL*STERACIPTKS Trigger: AGATTTTGTTGGGATACATGCCCGTTCTGTTGACCAGAGAAAACACAGCAACACGCTGCAGTCTGAATATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | GAATGCTTTTTAAATGTTTTCCCGCAAGTGCTGCATTaGTGGCAGGCTTTCTTCTTGGTGGGCACATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ECFLNVFPQVLH*WQAFFLVGTFW Trigger: CCAGAATGTGCCCACCAAGAAGAAAGCCTGCCACAAATGCAGCACTTGCGGGAAAACATTTAAAAAGCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | AAAGTCAAAGCTTCCTGCAGCTTGATTACCAAAGGCTaGCTGGCTGTTACCTGGTATTCTATGCCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KVKASCSLITKG*LAVTWYSMPSS Trigger: AGAAGAGGGCATAGAATACCAGGTAACAGCCAGCAAGCCTTTGGTAATCAAGCTGCAGGAAGCTTTGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213971.2 |
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| CDS CAA 90 bp | TCTCCACAGGACGTCTGTAGCCTACTCTTCTGTTTAAAAGATTCTTaGAGCCCTGTCTCCTCAGAAACACTTGTCTCAGGACTTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: SPQDVCSLLFCLKDS*SPVSSETLVSGLTD Trigger: ATCAGTAAGTCCTGAGACAAGTGTTTCTGAGGAGACAGGGCTCAAAGAATCTTTTAAACAGAAGAGTAGGCTACAGACGTCCTGTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
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| CDS CAA 90 bp | TTAAATGTTTTCCCGCAAGTGCTGCATTTGTGGCAGGCTTTCTTCTaGGTGGGCACATTCTGGAATGCAATTGACTTGGAACTCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LNVFPQVLHLWQAFF*VGTFWNAIDLELSS Trigger: TGATGAGAGTTCCAAGTCAATTGCATTCCAGAATGTGCCCACCAAGAAGAAAGCCTGCCACAAATGCAGCACTTGCGGGAAAACATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | CCCTGTCTCCTCAGAAACACTTGTCTCAGGACTTACTaGTGTCTTTACACAGGCTTCTATGTATTCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PCLLRNTCLRTY*CLYTGFYVFRR Trigger: CCTTCTGAATACATAGAAGCCTGTGTAAAGACATCAGTAAGTCCTGAGACAAGTGTTTCTGAGGAGACAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | TATCTGTCCTTTCCATTTTCTTTCAGTCCAGTATTCTaGTACACACCAAACCCCTCACCTGTGCCTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: YLSFPFSFSPVF*YTPNPSPVPLS Trigger: ACTCAGAGGCACAGGTGAGGGGTTTGGTGTGTATCAGAATACTGGACTGAAAGAAAATGGAAAGGACAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CCA 72 bp | TGCTTTTTAAATGTTTTCCCGCAAGTGCTGCATTTGTaGCAGGCTTTCTTCTTGGTGGGCACATTCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: CFLNVFPQVLHL*QAFFLVGTFWN Trigger: ATTCCAGAATGTGCCCACCAAGAAGAAAGCCTGCCACAAATGCAGCACTTGCGGGAAAACATTTAAAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | GACGTCTGTAGCCTACTCTTCTGTTTAAAAGATTCTTaGAGCCCTGTCTCCTCAGAAACACTTGTCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: DVCSLLFCLKDS*SPVSSETLVSG Trigger: TCCTGAGACAAGTGTTTCTGAGGAGACAGGGCTCAAAGAATCTTTTAAACAGAAGAGTAGGCTACAGACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | AGGCTTTCTTCTTGGTGGGCACATTCTGGAATGCAATaGACTTGGAACTCTCATCAGAAGGGTTATCACACT | + |
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Preference number: 6 (lower is better) Translates to: RLSSWWAHSGMQ*TWNSHQKGYHT Trigger: AGTGTGATAACCCTTCTGATGAGAGTTCCAAGTCAATTGCATTCCAGAATGTGCCCACCAAGAAGAAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CCA 72 bp | ACGTCACAAATTCCTATTCCATGTGAAGTCTCCAAGTaGTCCTCTAGAGCAGAACTGTTCTTGAGATGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TSQIPIPCEVSK*SSRAELFLRCD Trigger: ATCACATCTCAAGAACAGTTCTGCTCTAGAGGACCACTTGGAGACTTCACATGGAATAGGAATTTGTGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000214626.2 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | TATTCTGATACACACCAAACCCCTCACCTGTGCCTCTaGGTCCTTCCCCATATTTATTATTATAATGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: YSDTHQTPHLCL*VLPHIYYYNGV Trigger: CACACCATTATAATAATAAATATGGGGAAGGACTCAGAGGCACAGGTGAGGGGTTTGGTGTGTATCAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | AACCTGAGACTGCCTGTAACTCTGCTTGAAGTCTTCTaGACGTTTCTCTTGTTTATACACCTCTTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: NLRLPVTLLEVF*TFLLFIHLFVM Trigger: CATCACAAAGAGGTGTATAAACAAGAGAAACGTCAAGAAGACTTCAAGCAGAGTTACAGGCAGTCTCAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 90 bp | ATAAGATGTGAATGCTTTTTAAATGTTTTCCCGCAAGTGCTGCATTaGTGGCAGGCTTTCTTCTTGGTGGGCACATTCTGGAATGCAATT | + |
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Preference number: 6 (lower is better) Translates to: IRCECFLNVFPQVLH*WQAFFLVGTFWNAI Trigger: AATTGCATTCCAGAATGTGCCCACCAAGAAGAAAGCCTGCCACAAATGCAGCACTTGCGGGAAAACATTTAAAAAGCATTCACATCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 72 bp | CCTCTTTGTGATGTAATTTCATATGACGAGAAAAGTTaGACTTCCACCGAAAGGTTTTCCTACATCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLCDVISYDEKS*TSTERFSYIWY Trigger: GTACCAGATGTAGGAAAACCTTTCGGTGGAAGTCAAACTTTTCTCGTCATATGAAATTACATCACAAAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS TCA 72 bp | AGCATGTTGCGTTCGCTTCATATGAATAATATAAGATaGCCTATAGGTAAATGTTTCTCCACACCCACTACA | + |
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Preference number: 6 (lower is better) Translates to: SMLRSLHMNNIR*PIGKCFSTPTT Trigger: TGTAGTGGGTGTGGAGAAACATTTACCTATAGGTCATCTTATATTATTCATATGAAGCGAACGCAACATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056467.8 ENSMUST00000216063.2 |
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| CDS CAA 90 bp | AAGAATATCATTGTTTCTCAATACTTCAGATTCTCTTCCTGTCCTTaGACTAATGTCGGCTCCTTCCTTCATCTCTTTCATTTGTATGGA | + |
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Preference number: 6 (lower is better) Translates to: KNIIVSQYFRFSSCP*TNVGSFLHLFHLYG Trigger: TCCATACAAATGAAAGAGATGAAGGAAGGAGCCGACATTAGTCAAAGGACAGGAAGAGAATCTGAAGTATTGAGAAACAATGATATTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056467.8 ENSMUST00000213971.2 ENSMUST00000216063.2 |
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