Pregenerated sensors for ZFP444 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044876Ensembl transcript IDs: ENSMUST00000054680.12, ENSMUST00000108565.8, ENSMUST00000108566.8, ENSMUST00000108567.9, ENSMUST00000136777.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGCTTCTCGCGCGCAGGCAGGGGGCGCAGTGCAGGCCCTGGGCTaGCGGGGTGCGTGCCGCGGTGGCGCCGCAGGTGCTCCTTACGCC | + |
|
Preference number: 1 (lower is better) Translates to: AASRAQAGGAVQALG*RGACRGGAAGAPYA Trigger: GGCGTAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCCCGGCAGCCCAGGGCCTGCACTGCGCCCCCTGCCTGCGCGCGAGAAGCCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR CCA 90 bp | CGCGTGCGGCTTCTCGCGCGCAGGCAGGGGGCGCAGTGCAGGCCCTaGGCTGCCGGGGTGCGTGCCGCGGTGGCGCCGCAGGTGCTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: RVRLLARRQGAQCRP*AAGVRAAVAPQVLL Trigger: AAGGAGCACCTGCGGCGCCACCGCGGCACGCACCCCGGCAGCCCAGGGCCTGCACTGCGCCCCCTGCCTGCGCGCGAGAAGCCGCACGCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR CCA 90 bp | GATCCGGGTCCAGGCCTCTTCTCTCCATTGGCCCCGACTCTGTCCTaGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCACT | + |
|
Preference number: 1 (lower is better) Translates to: DPGPGLFSPLAPTLS*GSRSRSLEGRSGGT Trigger: AGTGCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCCTGGACCCGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | CTTCCTGCGATGTGTGAGGAGTCCCCAAGTCCCCTGTGCCTCAGATaGTCAGCTCCCACAACACCGGAGAGTCAGACTCCTGTACACACT | + |
|
Preference number: 1 (lower is better) Translates to: LPAMCEESPSPLCLR*SAPTTPESQTPVHT Trigger: AGTGTGTACAGGAGTCTGACTCTCCGGTGTTGTGGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACATCGCAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | CTAGTCTTTCTTCCTGCGATGTGTGAGGAGTCCCCAAGTCCCCTGTaGCTCAGATGCTCAGCTCCCACAACACCGGAGAGTCAGACTCCT | + |
|
Preference number: 1 (lower is better) Translates to: LVFLPAMCEESPSPL*LRCSAPTTPESQTP Trigger: AGGAGTCTGACTCTCCGGTGTTGTGGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACATCGCAGGAAGAAAGACTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 90 bp | GGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCATTaGCCCCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: GYGENQIRVQASSLH*PRLCPGVQDQDPWK Trigger: CTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | CCAGCCTGTCTTACTGCACAAGACGGACACCTCCACACCAAGTGCTaGCATGAAAGATACTGCATGGGTGTGGACCCTGAGGCATGCATC | + |
|
Preference number: 1 (lower is better) Translates to: PACLTAQDGHLHTKC*HERYCMGVDPEACI Trigger: GATGCATGCCTCAGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGTGGAGGTGTCCGTCTTGTGCAGTAAGACAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 90 bp | GGCCTTGAACTCACAGAGATCTGCCTGCCTCCGTGTCCTGAGTGCTaGGATTACAGGTGTCTGTCACCACTGCCCAGCTATCTTTTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: GLELTEICLPPCPEC*DYRCLSPLPSYLFL Trigger: GAGAAAAAGATAGCTGGGCAGTGGTGACAGACACCTGTAATCCCAGCACTCAGGACACGGAGGCAGGCAGATCTCTGTGAGTTCAAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | CTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTaGCCTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACC | + |
|
Preference number: 1 (lower is better) Translates to: LYTLSQSLYYSLRCW*PAICDKLSRVPLPT Trigger: GGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | ATGCTCAGCTCCCACAACACCGGAGAGTCAGACTCCTGTACACACTaGGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTGACCTGCCA | + |
|
Preference number: 1 (lower is better) Translates to: MLSSHNTGESDSCTH*VSHFITLSGAGDLP Trigger: TGGCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCGGTGTTGTGGGAGCTGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | TTTCACTGTGTGCTTCCTGTTATGCCAAATGACATGGCCTCTGTCTaGACGACACCCCCACCTTCCCATTGTTCCATGCTCCTCCCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: FHCVLPVMPNDMASV*TTPPPSHCSMLLPV Trigger: TACTGGGAGGAGCATGGAACAATGGGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCACACAGTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | TCAGTCACTTTATTACTCTCTCAGGTGCTGGTGACCTGCCATCTGTaGCAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGC | + |
|
Preference number: 1 (lower is better) Translates to: SVTLLLSQVLVTCHL*QAFSGTSPHLIPLG Trigger: GCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | ACGACACCCCCACCTTCCCATTGTTCCATGCTCCTCCCAGTAACTTaGAAGCCTGCAGCTGATAATGTGACTTCTCCAGCCTGTCTTACT | + |
|
Preference number: 1 (lower is better) Translates to: TTPPPSHCSMLLPVT*KPAADNVTSPACLT Trigger: AGTAAGACAGGCTGGAGAAGTCACATTATCAGCTGCAGGCTTTCAAGTTACTGGGAGGAGCATGGAACAATGGGAAGGTGGGGGTGTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | CAGACAAGCACAGCATTTTCACTGTGTGCTTCCTGTTATGCCAAATaGCATGGCCTCTGTCTGCACGACACCCCCACCTTCCCATTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: QTSTAFSLCASCYAK*HGLCLHDTPTFPLF Trigger: GAACAATGGGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCACACAGTGAAAATGCTGTGCTTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | GAAGAGAAGTTAGGTCTAGATTCCTGGACGGTCACTGTGAAGAACTaGGGTGCTTTCAGACCTGCTGGCTGGCACTTGGTTATTAGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: EEKLGLDSWTVTVKN*GAFRPAGWHLVIRS Trigger: ACTCCTAATAACCAAGTGCCAGCCAGCAGGTCTGAAAGCACCTCAGTTCTTCACAGTGACCGTCCAGGAATCTAGACCTAACTTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | CTCCACAGCAGACTGGGCAGACTTTATACCCAAAGAAGCGCATCCTaGAGAGAAGTTAGGTCTAGATTCCTGGACGGTCACTGTGAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: LHSRLGRLYTQRSAS*REVRSRFLDGHCEE Trigger: TTCTTCACAGTGACCGTCCAGGAATCTAGACCTAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCTGCTGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 90 bp | AGCCATGTTAGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTaGATGGTGTTATCTGCTTCTACACCATTGTGGGTCTCTGAAACA | + |
|
Preference number: 1 (lower is better) Translates to: SHVRVDIGAWQLCQR*MVLSASTPLWVSET Trigger: TGTTTCAGAGACCCACAATGGTGTAGAAGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAACATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | AATGGAGCTCGGGTCCTTGTTTACAGAGCAAGTGCTCTTACCCACTaGTTCATCTCAGACAAGCACAGCATTTTCACTGTGTGCTTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: NGARVLVYRASALTH*FISDKHSIFTVCFL Trigger: CAGGAAGCACACAGTGAAAATGCTGTGCTTGTCTGAGATGAATCAGTGGGTAAGAGCACTTGCTCTGTAAACAAGGACCCGAGCTCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | GCCTTCTTAGTTCCAGAAACAGCCCTCACCACCAGAGGGCAGCACTaGCTCAAAGGAATGCATACTCTCATGAAGATAGCATCATATAAC | + |
|
Preference number: 1 (lower is better) Translates to: AFLVPETALTTRGQH*LKGMHTLMKIASYN Trigger: GTTATATGATGCTATCTTCATGAGAGTATGCATTCCTTTGAGGCAGTGCTGCCCTCTGGTGGTGAGGGCTGTTTCTGGAACTAAGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 90 bp | GTGGCCCATCTGGAGGTGAGTTTTGTGCAGGGTGATGGATATGAATaGATGCTCATTCTGAATGTGTCTATCAAGTGTGACCAGCACCAT | + |
|
Preference number: 1 (lower is better) Translates to: VAHLEVSFVQGDGYE*MLILNVSIKCDQHH Trigger: ATGGTGCTGGTCACACTTGATAGACACATTCAGAATGAGCATGCATTCATATCCATCACCCTGCACAAAACTCACCTCCAGATGGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 90 bp | ATGTTAGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTGGATaGTGTTATCTGCTTCTACACCATTGTGGGTCTCTGAAACAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: MLGWTLGLGSFVKGG*CYLLLHHCGSLKQS Trigger: ACTCTGTTTCAGAGACCCACAATGGTGTAGAAGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 90 bp | TCTGCTGAAGATGCCATCTTTTCTTCAGTGTGTACCGCTGGCCTCTaGGTGGCTATAGGAGAACTGGTTCTCAGTTCTATTTCTCTAGTA | + |
|
Preference number: 1 (lower is better) Translates to: SAEDAIFSSVCTAGL*VAIGELVLSSISLV Trigger: TACTAGAGAAATAGAACTGAGAACCAGTTCTCCTATAGCCACCCAGAGGCCAGCGGTACACACTGAAGAAAAGATGGCATCTTCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 90 bp | GGAGACAGGAGAACCAGAAATCTGTGGTCACCTTTGGTTACACAATaGGATCAAGGTCAGCTTAGACTGATTCAGCAAGTTCTCATCTTA | + |
|
Preference number: 1 (lower is better) Translates to: GDRRTRNLWSPLVTQ*DQGQLRLIQQVLIL Trigger: TAAGATGAGAACTTGCTGAATCAGTCTAAGCTGACCTTGATCTCATTGTGTAACCAAAGGTGACCACAGATTTCTGGTTCTCCTGTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACGCGTGCGGCTTCTCGCGCGCAGGCAGGGGGCGCAGTGCAGGCCCTGGGGGTGCGTGCCGCGGTaGCGCCGCAGGTGCTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: AARVRLLARRQGAQCRPWGCVPR*RRRCSL Trigger: TAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCC...CCAGGGCCTGCACTGCGCCCCCTGCCTGCGCGCGAGAAGCCGCACGCGTGCTGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCACGCGTGCGGCTTCTCGCGCGCAGGCAGGGGGCGCAGTGCAGGCCCTGGCGGTGGCGCCGCAGGTaGTCCTTACGCCGGAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: AARVRLLARRQGAQCRPWRWRRR*SLRRNA Trigger: GGCATTCCGGCGTAAGGAGCACCTGCGGCGCCACCG...CCAGGGCCTGCACTGCGCCCCCTGCCTGCGCGCGAGAAGCCGCACGCGTGCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGGTACGCCGGAATGCCTTaGCGCACTCAGGGCACGCGT | + |
|
Preference number: 2 (lower is better) Translates to: SQQAKGRAPECVLRWRTRYAGMP*RTQGTR Trigger: ACGCGTGCCCTGAGTGCGGCAAGGCATTCCGGCGTA...CCTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGGGGCTTCTCACCGGAGTaGCTTTGCCGGTGGCGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SQQAKGRAPECVLRWRTRGFSPE*LCRWRS Trigger: ACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCC...CCTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCGAGGAGTGGGGGCACTaGTCCTTCCCTGAGCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SPHLIPLGYGENQIRVQAEEWGH*SFPEPP Trigger: AGGGGGCTCAGGGAAGGAGCAGTGCCCCCACTCCTC...GGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCACTCAGGAGGCAGAGGTAGGCGGATCTCTTATGAGTCTGGGGGCAGCCTGGGGGTGGGTGAAAGCTaGGAACTCCAGAAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QHSGGRGRRISYESGGSLGVGES*ELQKEG Trigger: CCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCC...CAGGCTGCCCCCAGACTCATAAGAGATCCGCCTACCTCTGCCTCCTGAGTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGCACTCAGGAGGCAGAGGTAGGCGGATCTCTTATGAGTCTGGGGGCAGCCTGCCAGGAGCTCAAAGCTaGTACCCAGAAGAGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QHSGGRGRRISYESGGSLPGAQS*YPEEPA Trigger: TGCTGGCTCTTCTGGGTACCAGCTTTGAGCTCCTGG...CAGGCTGCCCCCAGACTCATAAGAGATCCGCCTACCTCTGCCTCCTGAGTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGACCTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCGGGGTGGGTGAAAGCTaGGAACTCCAGAAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GDLPSVTSFLGYLSPPHSGVGES*ELQKEG Trigger: CCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCC...GGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTGCCTCTTCTCTCCATTaGCCCCGACTCTGTCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GYLSPPHSFRLWREPDPGASSLH*PRLCPG Trigger: CCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGC...ACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGGAGGAGTGGGGGCACTaGTCCTTCCCTGAGCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWEEWGH*SFPEPP Trigger: AGGGGGCTCAGGGAAGGAGCAGTGCCCCCACTCCTC...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | GGACACCTCCACACCAAGTGCTGCCATGAAAGATACTGCATGGGTGTGGACCCTCGAAACTCCCATTTCTaGCAGAGCCCCACCCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: GHLHTKCCHERYCMGVDPRNSHF*QSPTPT Trigger: GGTAGGGGTGGGGCTCTGGCAGAAATGGGAGTTTCG...AGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGTGGAGGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGACCTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCGGTCTTTCGCAGGGGTaGGTGAAAGCTGAGAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: GDLPSVTSFLGYLSPPHSGLSQG*VKAENS Trigger: GGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACC...GGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCAAGAGGCAATGGGGTTaGGAGAACTCTAAGGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: PTLSWGSRSRSLEGRSGGKRQWG*ENSKGM Trigger: CATCCCCTTAGAGTTCTCCCAACCCCATTGCCTCTT...GCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCAGGTCTTTCGCAGGGGTaGGTGAAAGCTGAGAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: HSFRLWREPDPGPGLFSPGLSQG*VKAENS Trigger: GGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACC...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGCAAGATCAAGATCCTTaGAAGGGAGGAGTGGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TSPHLIPLGYGENQIRVQQDQDP*KGGVGA Trigger: TGCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTG...CTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGGCCCCGACTCTGTCCTaGGGTTCAAGATCAAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LPSVTSFLGYLSPPHSFRAPTLS*GSRSRS Trigger: GGATCTTGATCTTGAACCCCAGGACAGAGTCGGGGC...CCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAAAGAGGCAATGGGGTTaGGAGAACTCTAAGGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: EKGLSQGWVKAENSRRKGKRQWG*ENSKGM Trigger: CATCCCCTTAGAGTTCTCCCAACCCCATTGCCTCTT...TCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCAAAGGGAAGAGGCAATaGGGTTGGGAGAACTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPHLIPLGYGENQIRVQAKGKRQ*GWENSK Trigger: CTTAGAGTTCTCCCAACCCCATTGCCTCTTCCCTTT...GGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTAAAGGGAAGAGGCAATaGGGTTGGGAGAACTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PHLIPLGYGENQIRVQASKGKRQ*GWENSK Trigger: CTTAGAGTTCTCCCAACCCCATTGCCTCTTCCCTTT...AGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGCCCCGACTCTGTCCTaGGGTTCAAGATCAAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: VTSFLGYLSPPHSFRLWRAPTLS*GSRSRS Trigger: GGATCTTGATCTTGAACCCCAGGACAGAGTCGGGGC...TCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCATTCTGAATGTGTCTATCAAGTGTGACCAGCACCATCTGCTGAAGATGCCAGCCCCCTTTCTCACTTaGAGGGTGTCCTGGGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LILNVSIKCDQHHLLKMPAPFLT*RVSWGK Trigger: CTTGCCCCAGGACACCCTTCAAGTGAGAAAGGGGGC...TGGCATCTTCAGCAGATGGTGCTGGTCACACTTGATAGACACATTCAGAATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGTCTGCTCCACAGCAGACTGGGCAGACTTTATACCCAAAGAAGCGCATCGTCACTGTGAAGAACTaGGGTGCTTTCAGACCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PESAPQQTGQTLYPKKRIVTVKN*GAFRPA Trigger: AGCAGGTCTGAAAGCACCTCAGTTCTTCACAGTGAC...GATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCTGCTGTGGAGCAGACTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCGTGGCCCATCTGGAGGTGAGTTTTGTGCAGGGTGATGGATATGAATGCATGTCCTGTTATGCCAAATaGCATGGCCTCTGTCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PVAHLEVSFVQGDGYECMSCYAK*HGLCLH Trigger: GTGCAGACAGAGGCCATGTCATTTGGCATAACAGGA...CATGCATTCATATCCATCACCCTGCACAAAACTCACCTCCAGATGGGCCACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAGACTGGGCAGACTTTATACCCAAAGAAGCGCATCCTGAAGAGAAGTTATCCCCAAGTCCCCTGTaGCTCAGATGCTCAGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TADWADFIPKEAHPEEKLSPSPL*LRCSAP Trigger: GGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGA...TAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTAGCAATATTATTAACTTAGTAATGGTTGTGGGCGACATTACAAGCACCATGGAGGAGTGGGGGCACTaGTCCTTCCCTGAGCCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PSNIINLVMVVGDITSTMEEWGH*SFPEPP Trigger: AGGGGGCTCAGGGAAGGAGCAGTGCCCCCACTCCTC...CATGGTGCTTGTAATGTCGCCCACAACCATTACTAAGTTAATAATATTGCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CGGAGAGTCAGACTCCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGAAGAGGCAATGGGGTTaGGAGAACTCTAAGGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RRVRLLYTLSQSLYYSLRKRQWG*ENSKGM Trigger: CATCCCCTTAGAGTTCTCCCAACCCCATTGCCTCTT...CCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTCTGAATGTGTCTATCAAGTGTGACCAGCACCATCTGCTGAAGATGCCAGATACTGCATGGGTGTaGACCCTGAGGCATGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: LILNVSIKCDQHHLLKMPDTAWV*TLRHAS Trigger: TGATGCATGCCTCAGGGTCCACACCCATGCAGTATC...TGGCATCTTCAGCAGATGGTGCTGGTCACACTTGATAGACACATTCAGAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACGACATAGTGCATACTTATGATCTTCAAACTGGGGAGATGGAGACAGGATTTCGCAGGGGTGGGTaGAAGCTGAGAACTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TDDIVHTYDLQTGEMETGFRRGG*KLRTPE Trigger: TTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAA...TCCTGTCTCCATCTCCCCAGTTTGAAGATCATAAGTATGCACTATGTCGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGGCTTGGCAGCTTTGTCAAAGGTGGATGGTGTTATCTGCTTCTACACCATTGAGTTAATATGCTCCTaGAAAACCTCTGTGAGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: WGLAALSKVDGVICFYTIELICS*KTSVSR Trigger: CCGGCTCACAGAGGTTTTTCAGGAGCATATTAACTC...AATGGTGTAGAAGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGCGAAACGGGAACTATTaGTCAGAAAAGGGGATTTCG | + |
|
Preference number: 2 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWRNGNY*SEKGIS Trigger: CGAAATCCCCTTTTCTGAGCAATAGTTCCCGTTTCG...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTAAAATTGGGCTGGGTTTACATGCTGCTTGGTTTCTTTAGTCTTCTCTACGACATGGCCTCTGTCTaGACGACACCCCCACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLKLGWVYMLLGFFSLLYDMASV*TTPPPS Trigger: GGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTC...GTAGAGAAGACTAAAGAAACCAAGCAGCATGTAAACCCAGCCCAATTTTAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTGGATGGTGTTATCTTTCAAACTGGGGAGATaGAGACAGGAGAACCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VRVDIGAWQLCQRWMVLSFKLGR*RQENQK Trigger: TTTCTGGTTCTCCTGTCTCCATCTCCCCAGTTTGAA...AGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGACAGGAGAACCAGAAATCTGTGGTCACCTTTGGTTACACAATGAGATCAGGTGCTTTCAGACCTaGTGGCTGGCACTTGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: METGEPEICGHLWLHNEIRCFQT*WLALGY Trigger: ATAACCAAGTGCCAGCCAGCAGGTCTGAAAGCACCT...GATCTCATTGTGTAACCAAAGGTGACCACAGATTTCTGGTTCTCCTGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTCTGAATGTGTCTATCAAGTGTGACCAGCACCATCTGCTGAAGATGCCACATTCCTTTAGGCTATaGAGAGAACCAGATCCGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LILNVSIKCDQHHLLKMPHSFRL*REPDPG Trigger: ACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG...TGGCATCTTCAGCAGATGGTGCTGGTCACACTTGATAGACACATTCAGAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTGGATGGTGTTATCTAAAACTTGGGCATGGTaGCACATGCCTTTTAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: VRVDIGAWQLCQRWMVLSKTWAW*HMPFKI Trigger: GATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTT...AGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTGGATGGTGTTATCTATAAAAACCTCTTTGTaGAAAGGGCTGTCTACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VRVDIGAWQLCQRWMVLSIKTSL*KGLSTC Trigger: GCAGGTAGACAGCCCTTTCCACAAAGAGGTTTTTAT...AGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 90 bp | GTGTTCACTATTCAACACCAACACCAGCACTTGTTATCTATTTATTaGGGGTTGTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VFTIQHQHQHLLSIY*GLFQTGFLCVALAV Trigger: GACAGCCAGGGCTACACAGAGAAACCCTGTCTGGAACAACCCCAAATAAATAGATAACAAGTGCTGGTGTTGGTGTTGAATAGTGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAGATCACAGACGACATAGTGCATACTTATGATCTTCAAACTGGGGAGATGGGTCTTTCGCAGGGGTaGGTGAAAGCTGAGAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: FKITDDIVHTYDLQTGEMGLSQG*VKAENS Trigger: GGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACC...CATCTCCCCAGTTTGAAGATCATAAGTATGCACTATGTCGTCTGTGATCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCAAAGCTTTTCAGCTTTATGAGGCCCCATTTATTAAGTGTAGCACTTAGTTTTCGCAGGGGTGGGTaGAAGCTGAGAACTCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CAKLFSFMRPHLLSVALSFRRGG*KLRTPE Trigger: TTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAA...ACTAAGTGCTACACTTAATAAATGGGGCCTCATAAAGCTGAAAAGCTTTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR TCA 90 bp | AGACATCTAGGCAGTTTACACCTTCTGGCTATAAAGAGAGCAACAATGAACACGTGTGTCTATCAAGTGTaGCCAGCACCATCTGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RHLGSLHLLAIKRATMNTCVYQV*PAPSAE Trigger: TTCAGCAGATGGTGCTGGTCACACTTGATAGACACA...CGTGTTCATTGTTGCTCTCTTTATAGCCAGAAGGTGTAAACTGCCTAGATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAGATCACAGACGACATAGTGCATACTTATGATCTTCAAACTGGGGAGATGCAAGATCAAGATCCTTaGAAGGGAGGAGTGGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FKITDDIVHTYDLQTGEMQDQDP*KGGVGA Trigger: TGCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTG...CATCTCCCCAGTTTGAAGATCATAAGTATGCACTATGTCGTCTGTGATCTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAGTTTACACCTTCTGGCTATAAAGAGAGCAACAATGAACACGGACAAACATGCTCCACAGCAGACTaGGCAGACTTTATACCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: RQFTPSGYKESNNEHGQTCSTAD*ADFIPK Trigger: TTTGGGTATAAAGTCTGCCCAGTCTGCTGTGGAGCA...TGTTTGTCCGTGTTCATTGTTGCTCTCTTTATAGCCAGAAGGTGTAAACTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAGATCACAGACGACATAGTGCATACTTATGATCTTCAAACTGGGGAGATGAGGTGCTTTCAGACCTaGTGGCTGGCACTTGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: FKITDDIVHTYDLQTGEMRCFQT*WLALGY Trigger: ATAACCAAGTGCCAGCCAGCAGGTCTGAAAGCACCT...CATCTCCCCAGTTTGAAGATCATAAGTATGCACTATGTCGTCTGTGATCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTTACATGCTGCTTGGTTTCTTTAGTCTTCTCTACATTCTGGGTGCAGACTTCCCGCTGTCAGTTTaGTTGAATGATAGTGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WVYMLLGFFSLLYILGADFPLSV*LNDSVL Trigger: AAGGACACTATCATTCAAGCAAACTGACAGCGGGAA...GTCTGCACCCAGAATGTAGAGAAGACTAAAGAAACCAAGCAGCATGTAAACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 90 bp | AAACGTCTCTCGGCCATTTGTTTAACCTTTGGAGAACTCTGTATATaGCCATGCCTCACTTTTAAAATTGGGCTGGGTTTACATGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KRLSAICLTFGELCI*PCLTFKIGLGLHAA Trigger: AGCAGCATGTAAACCCAGCCCAATTTTAAAAGTGAGGCATGGCAATATACAGAGTTCTCCAAAGGTTAAACAAATGGCCGAGAGACGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 90 bp | ACCAGCAACAAGTGTGTGTTCACTATTCAACACCAACACCAGCACTaGTTATCTATTTATTTGGGGTTGTTCCAGACAGGGTTTCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TSNKCVFTIQHQHQH*LSIYLGLFQTGFLC Trigger: ACAGAGAAACCCTGTCTGGAACAACCCCAAATAAATAGATAACAAGTGCTGGTGTTGGTGTTGAATAGTGAACACACACTTGTTGCTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGGCCTCTTCTCTCCATaGGCCCCGACTCTGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGTSPHLIPLGYGENQIRGLFSP*APTLSW Trigger: CCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCC...CCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | GAACTCACAGAGATCTGCCTGCCTCCGTGTCCTGAGTaGTGGGATTACAGGTGTCTGTCACCACTGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ELTEICLPPCPE*WDYRCLSPLPS Trigger: GCTGGGCAGTGGTGACAGACACCTGTAATCCCAGCACTCAGGACACGGAGGCAGGCAGATCTCTGTGAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | ACTAGGACTGGAAAGCCTGAAGCAACAGCAGCAGCATaGTTAACAGGGGCTGGGGCAGGAGCGCCACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TRTGKPEATAAA*LTGAGAGAPQS Trigger: TGACTGTGGCGCTCCTGCCCCAGCCCCTGTTAACCATGCTGCTGCTGTTGCTTCAGGCTTTCCAGTCCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CCAGGCCTCTTCTCTCCATTGGCCCCGACTCTGTCCTaGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PGLFSPLAPTLS*GSRSRSLEGRS Trigger: ACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCATTaGCCCCGACTCTGTCCTGGGGTTCAAGATCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ENQIRVQASSLH*PRLCPGVQDQD Trigger: ATCTTGATCTTGAACCCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATaGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGYLSPPHSFRL*REPDPGPGLFS Trigger: AGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CTCACAGAGATCTGCCTGCCTCCGTGTCCTGAGTGCTaGGATTACAGGTGTCTGTCACCACTGCCCAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LTEICLPPCPEC*DYRCLSPLPSY Trigger: ATAGCTGGGCAGTGGTGACAGACACCTGTAATCCCAGCACTCAGGACACGGAGGCAGGCAGATCTCTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | AGACCTTCCGAGTCTAGTCTTTCTTCCTGCGATGTGTaGGGAGTCCCCAAGTCCCCTGTGCCTCAGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RPSESSLSSCDV*GVPKSPVPQML Trigger: GAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACATCGCAGGAAGAAAGACTAGACTCGGAAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTaGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GMREGEKGLSQG*VKAENSRRKGG Trigger: TCCTCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGATCTTCAAACTGGGGAGATGGAGACAGGAGAACCAGAAATCTGTGGTCACCGGCCTCTTCTCTCCATaGGCCCCGACTCTGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MIFKLGRWRQENQKSVVTGLFSP*APTLSW Trigger: CCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCC...GGTGACCACAGATTTCTGGTTCTCCTGTCTCCATCTCCCCAGTTTGAAGATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | GGACACCTCCACACCAAGTGCTGCCATGAAAGATACTaGATGGGTGTGGACCCTGAGGCATGCATCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GHLHTKCCHERY*MGVDPEACINV Trigger: GACATTGATGCATGCCTCAGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGTGGAGGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | CTTACTGCACAAGACGGACACCTCCACACCAAGTGCTaGCATGAAAGATACTGCATGGGTGTGGACCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTAQDGHLHTKC*HERYCMGVDPE Trigger: CTCAGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGTGGAGGTGTCCGTCTTGTGCAGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | GTGCTTCCTGTTATGCCAAATGACATGGCCTCTGTCTaGACGACACCCCCACCTTCCCATTGTTCCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLPVMPNDMASV*TTPPPSHCSML Trigger: GAGCATGGAACAATGGGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | TGTCTTACTGCACAAGACGGACACCTCCACACCAAGTaGTGCCATGAAAGATACTGCATGGGTGTGGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLTAQDGHLHTK*CHERYCMGVDP Trigger: AGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGTGGAGGTGTCCGTCTTGTGCAGTAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | AGAACTGAGGTGCTTTCAGACCTGCTGGCTGGCACTTaGTTATTAGGAGTGGACCGGAGGCACCTAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RTEVLSDLLAGT*LLGVDRRHLAI Trigger: TATTGCTAGGTGCCTCCGGTCCACTCCTAATAACCAAGTGCCAGCCAGCAGGTCTGAAAGCACCTCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GCTAAGGACTGTCCCAGAGTCTGCTCCACAGCAGACTaGGCAGACTTTATACCCAAAGAAGCGCATCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: AKDCPRVCSTAD*ADFIPKEAHPE Trigger: TTCAGGATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCTGCTGTGGAGCAGACTCTGGGACAGTCCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CTGGGCTATCAGTGCTCTGCTCAGAAACCCCTTTCCTaGGACAGCGAGTTCAAGCCTATTCCCTATCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGYQCSAQKPLS*DSEFKPIPYLL Trigger: GAGAAGATAGGGAATAGGCTTGAACTCGCTGTCCCAGGAAAGGGGTTTCTGAGCAGAGCACTGATAGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | CCACCTTCCCATTGTTCCATGCTCCTCCCAGTAACTTaGAAGCCTGCAGCTGATAATGTGACTTCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PPSHCSMLLPVT*KPAADNVTSPA Trigger: GGCTGGAGAAGTCACATTATCAGCTGCAGGCTTTCAAGTTACTGGGAGGAGCATGGAACAATGGGAAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | ACAGCATTTTCACTGTGTGCTTCCTGTTATGCCAAATaGCATGGCCTCTGTCTGCACGACACCCCCACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TAFSLCASCYAK*HGLCLHDTPTF Trigger: GAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCACACAGTGAAAATGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | ATGGCAGTGTCCAGGCAGGTATGGTGTAGGAGGAACTaGGAGTTCTACATCTTCATCTGGAGGCTGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MAVSRQVWCRRN*EFYIFIWRLLG Trigger: TCCTAGCAGCCTCCAGATGAAGATGTAGAACTCTCAGTTCCTCCTACACCATACCTGCCTGGACACTGCCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | GACAAGCACAGCATTTTCACTGTGTGCTTCCTGTTATaGCAAATGACATGGCCTCTGTCTGCACGACACCCC | + |
|
Preference number: 3 (lower is better) Translates to: DKHSIFTVCFLL*QMTWPLSARHP Trigger: GGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCACACAGTGAAAATGCTGTGCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | AGGGTGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTaGATGGTGTTATCTGCTTCTACACCATTGTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVDIGAWQLCQR*MVLSASTPLWV Trigger: GACCCACAATGGTGTAGAAGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | ACACCAAGTGCTGCCATGAAAGATACTGCATGGGTGTaGACCCTGAGGCATGCATCAATGTCTTGGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TPSAAMKDTAWV*TLRHASMSWCG Trigger: ACCACACCAAGACATTGATGCATGCCTCAGGGTCCACACCCATGCAGTATCTTTCATGGCAGCACTTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGCATaGCAGTGTCCAGGCAGGTATGGTGTAGGAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: SEVQSIIIKVGA*QCPGRYGVGGT Trigger: AGTTCCTCCTACACCATACCTGCCTGGACACTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | CTGAGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTaGCCTGCCATCTGTGACAAGCTTTCTCGGGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSQSLYYSLRCW*PAICDKLSRVP Trigger: AGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | TCCCACAACACCGGAGAGTCAGACTCCTGTACACACTaGGTCAGTCACTTTATTACTCTCTCAGGTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SHNTGESDSCTH*VSHFITLSGAG Trigger: ACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCGGTGTTGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | CATGAAAGATACTGCATGGGTGTGGACCCTGAGGCATaGATCAATGTCTTGGTGTGGTCTTCAGAACTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HERYCMGVDPEA*INVLVWSSELG Trigger: CCCTAGTTCTGAAGACCACACCAAGACATTGATGCATGCCTCAGGGTCCACACCCATGCAGTATCTTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | TGGACATTGGGGCTTGGCAGCTTTGTCAAAGGTGGATaGTGTTATCTGCTTCTACACCATTGTGGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WTLGLGSFVKGG*CYLLLHHCGSL Trigger: CAGAGACCCACAATGGTGTAGAAGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GGGTTCATTAGCCATGTTAGGGTGGACATTGGGGCTTaGCAGCTTTGTCAAAGGTGGATGGTGTTATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GFISHVRVDIGA*QLCQRWMVLSA Trigger: AGCAGATAACACCATCCACCTTTGACAAAGCTGCCAAGCCCCAATGTCCACCCTAACATGGCTAATGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GGTGTGGACCCTGAGGCATGCATCAATGTCTTGGTGTaGTCTTCAGAACTAGGGTTCATTAGCCATGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVDPEACINVLV*SSELGFISHVR Trigger: CCTAACATGGCTAATGAACCCTAGTTCTGAAGACCACACCAAGACATTGATGCATGCCTCAGGGTCCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | ATTTTCACTGTGTGCTTCCTGTTATGCCAAATGACATaGCCTCTGTCTGCACGACACCCCCACCTTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: IFTVCFLLCQMT*PLSARHPHLPI Trigger: AATGGGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATGTCATTTGGCATAACAGGAAGCACACAGTGAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | AGACTGGGCAGACTTTATACCCAAAGAAGCGCATCCTaGAGAGAAGTTAGGTCTAGATTCCTGGACGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RLGRLYTQRSAS*REVRSRFLDGH Trigger: GTGACCGTCCAGGAATCTAGACCTAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CCCACCAAGCAAACCCGGAATAAAACTTGGGCATGGTaGCACATGCCTTTTAAGATCACAGACGACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PTKQTRNKTWAW*HMPFKITDDIV Trigger: CACTATGTCGTCTGTGATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTTATTCCGGGTTTGCTTGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | GATGCCATCTTTTCTTCAGTGTGTACCGCTGGCCTCTaGGTGGCTATAGGAGAACTGGTTCTCAGTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: DAIFSSVCTAGL*VAIGELVLSSI Trigger: AATAGAACTGAGAACCAGTTCTCCTATAGCCACCCAGAGGCCAGCGGTACACACTGAAGAAAAGATGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | ATGAGGCCCCATTTATTAAGTGTAGCACTTAGTGCCTaGGCTATCAGTGCTCTGCTCAGAAACCCCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MRPHLLSVALSA*AISALLRNPFP Trigger: AGGAAAGGGGTTTCTGAGCAGAGCACTGATAGCCCAGGCACTAAGTGCTACACTTAATAAATGGGGCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTGATAATGTGACTTCTCCAGCCTGTCTTACTGCACAAGACGGACACCTCACAATAAAAACCTCTTaGTGGAAAGGGCTGTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: AADNVTSPACLTAQDGHLTIKTS*WKGLST Trigger: GGTAGACAGCCCTTTCCACAAAGAGGTTTTTATTGT...GAGGTGTCCGTCTTGTGCAGTAAGACAGGCTGGAGAAGTCACATTATCAGCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | CGGGTCCTTGTTTACAGAGCAAGTGCTCTTACCCACTaGTTCATCTCAGACAAGCACAGCATTTTCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RVLVYRASALTH*FISDKHSIFTV Trigger: CACAGTGAAAATGCTGTGCTTGTCTGAGATGAATCAGTGGGTAAGAGCACTTGCTCTGTAAACAAGGACCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | TTTCTTTGGGTATGTATTCCAGGAAGGTCCCATGTATaGATTAAGAACGAGAACCGGGCATGGTGGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FLWVCIPGRSHV*IKNENRAWWST Trigger: TGTGGACCACCATGCCCGGTTCTCGTTCTTAATGCATACATGGGACCTTCCTGGAATACATACCCAAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | ATTCCCTATCTTCTCTTCTATCAGATTCAAGGTATCTaGACTTATGTTGACGCCCGTGGCCCATCTGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IPYLLFYQIQGI*TYVDARGPSGG Trigger: ACCTCCAGATGGGCCACGGGCGTCAACATAAGTCCAGATACCTTGAATCTGATAGAAGAGAAGATAGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | TTCCCGCTGTCAGTTTGCTTGAATGATAGTGTCCTTTaGTGTGCAAAGCTTTTCAGCTTTATGAGGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FPLSVCLNDSVL*CAKLFSFMRPH Trigger: ATGGGGCCTCATAAAGCTGAAAAGCTTTGCACAGCAAAGGACACTATCATTCAAGCAAACTGACAGCGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | GTTTTTAGGAACCTCCAGGCTGACTTCCATAGTGGTTaGACTAGTCTGTATTTCCACCAGCAACAAGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VFRNLQADFHSG*TSLYFHQQQVC Trigger: ACACACTTGTTGCTGGTGGAAATACAGACTAGTGCAACCACTATGGAAGTCAGCCTGGAGGTTCCTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | AAACCCACCAAGCAAACCCGGAATAAAACTTGGGCATaGTGGCACATGCCTTTTAAGATCACAGACGACATA | + |
|
Preference number: 3 (lower is better) Translates to: KPTKQTRNKTWA*WHMPFKITDDI Trigger: TATGTCGTCTGTGATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTTATTCCGGGTTTGCTTGGTGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR CCA 72 bp | CTTTTGCGCCAGTGCAATGTTATAGATGCTGATAAATaGAGCTCGGGTCCTTGTTTACAGAGCAAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLRQCNVIDADK*SSGPCLQSKCS Trigger: AGAGCACTTGCTCTGTAAACAAGGACCCGAGCTCCATTTATCAGCATCTATAACATTGCACTGGCGCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | CTGGAGGTGAGTTTTGTGCAGGGTGATGGATATGAATaGATGCTCATTCTGAATGTGTCTATCAAGTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LEVSFVQGDGYE*MLILNVSIKCD Trigger: GTCACACTTGATAGACACATTCAGAATGAGCATGCATTCATATCCATCACCCTGCACAAAACTCACCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | AGAACCAGAAATCTGTGGTCACCTTTGGTTACACAATaGGATCAAGGTCAGCTTAGACTGATTCAGCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RTRNLWSPLVTQ*DQGQLRLIQQV Trigger: AACTTGCTGAATCAGTCTAAGCTGACCTTGATCTCATTGTGTAACCAAAGGTGACCACAGATTTCTGGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | GCTGGTAATGATTTCTTTTCCCGCTGTCAGTTTGCTTaGATGATAGTGTCCTTTGCTGTGCAAAGCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AGNDFFSRCQFA*MIVSFAVQSFS Trigger: TGAAAAGCTTTGCACAGCAAAGGACACTATCATTCAAGCAAACTGACAGCGGGAAAAGAAATCATTACCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR TCA 72 bp | TTCTACATCTTCATCTGGAGGCTGCTAGGAAAATACTaGTTTCTAAGCAGCCAGGATAAGGGTATTAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FYIFIWRLLGKY*FLSSQDKGIKA Trigger: GGCTTTAATACCCTTATCCTGGCTGCTTAGAAATCAGTATTTTCCTAGCAGCCTCCAGATGAAGATGTAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR GCA 72 bp | TCTATTTCTCTAGTAAGAATTCTGCTTTTGCGCCAGTaGAATGTTATAGATGCTGATAAATGGAGCTCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SISLVRILLLRQ*NVIDADKWSSG Trigger: ACCCGAGCTCCATTTATCAGCATCTATAACATTGCACTGGCGCAAAAGCAGAATTCTTACTAGAGAAATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GCCGGGGTGCGTGCCGCGGTGGCGCCGCAGGTGCTCCTTACGCCGGAATGCCTTCCACGCCTGGGTGTCTaGAGGGAGGGCGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGVRAAVAPQVLLTPECLPRLGV*REGAQE Trigger: TTCCTGAGCGCCCTCCCTGCAGACACCCAGGCGTGG...AAGGCATTCCGGCGTAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR CCA 90 bp | CACGCGTGCGGCTTCTCACCGGAGTGGCTTTGCCGGTGGCGCAGTAGATGCGCCGCCTCCTCTCCGCTCTaGGGCCGGCGGCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: HACGFSPEWLCRWRSRCAASSPL*GRRLHT Trigger: GGTGTGCAGCCGCCGGCCCCAGAGCGGAGAGGAGGC...GGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGGCTTCTCACCGGAGTGGCTTTGCCGGTGGCGCAGTAGATGCGCCGGCGGGCTGCCCGGCTCCTaGTTGTATGGGCGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACGFSPEWLCRWRSRCAGGLPGS*LYGRMA Trigger: GGCCATGCGCCCATACAAGCAGGAGCCGGGCAGCCC...GCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGGTGGGCAGGGAGGACCGGTaGCAGTGGAGCTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAGERSRARVCLAVAHQVGREDR*QWSWWG Trigger: CCCCCACCAGCTCCACTGGCACCGGTCCTCCCTGCC...CACCTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGTGCCAGTGGAGCTGGTaGGGGGCTGCCCGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPAGERSRARVCLAVAHQCQWSW*GAARLL Trigger: CAGGAGCCGGGCAGCCCCCCACCAGCTCCACTGGCA...CTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAGERSRARVCLAVAHQPGTTQ*LELPGR Trigger: CCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGG...CTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAGGTGCTCGCGCCAGTGTTCTCCTGCTTCACTaGCTGGGTCGTTGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVARQSVSCGGAPGARASVLLLH*LGRWGL Trigger: GAGGCCCCAACGACCCAGCCAGTGAAGCAGGAGAAC...ACTGGCGCGAGCACCTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | CACGCGTGCGGCTTCTCACCGGAGTGGCTTTGCCGGTGGCGCAGTAGATGCGCCATCTGCTCCTTCGTGTaGACTTCCGGCTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HACGFSPEWLCRWRSRCAICSFV*TSGWSQ Trigger: CTGGCTCCAGCCGGAAGTGCACACGAAGGAGCAGAT...GGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACTCAGGAGGCAGAGGTAGGCGGATCTCTTATGAGTCTGGGGGCAGCCTGGGGCTGCCCGGCTCCTaGTTGTATGGGCGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QHSGGRGRRISYESGGSLGLPGS*LYGRMA Trigger: GGCCATGCGCCCATACAAGCAGGAGCCGGGCAGCCC...CAGGCTGCCCCCAGACTCATAAGAGATCCGCCTACCTCTGCCTCCTGAGTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAAGAGGCAATGGGGGCCTCCTCTCCGCTCTaGGGCCGGCGGCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKGGVDMGPKREEAMGASSPL*GRRLHT Trigger: GGTGTGCAGCCGCCGGCCCCAGAGCGGAGAGGAGGC...CCCCATTGCCTCTTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CAGCACTCAGGAGGCAGAGGTAGGCGGATCTCTTATGAGTCTGGGGGCAGCCTGCCACGCCTGGGTGTCTaGAGGGAGGGCGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHSGGRGRRISYESGGSLPRLGV*REGAQE Trigger: TTCCTGAGCGCCCTCCCTGCAGACACCCAGGCGTGG...CAGGCTGCCCCCAGACTCATAAGAGATCCGCCTACCTCTGCCTCCTGAGTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGCCTCCTCTCCGCTCTaGGGCCGGCGGCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: SGTSPHLIPLGYGENQIRASSPL*GRRLHT Trigger: GGTGTGCAGCCGCCGGCCCCAGAGCGGAGAGGAGGC...CCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTGCCAGTGGAGCTGGTaGGGGGCTGCCCGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPHLIPLGYGENQIRVQACQWSW*GAARLL Trigger: CAGGAGCCGGGCAGCCCCCCACCAGCTCCACTGGCA...GGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGTGTGTCTTGCGGTGGCGCACCAGGTGCTCGCGCCAGTAGAAGGTCTTGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVCLAVAHQVLAPVEGLARHSA*SCQEGR Trigger: CCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGC...AAGACCTTCTACTGGCGCGAGCACCTGGTGCGCCACCGCAAGACACACTCTGGC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCTTGCGGTGGCGCACCAACCGCCAGGTTCTCCTaGTTCACTGGCTGGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPSRRKVARQSVSCGGAPTARFS*FTGWVV Trigger: AACGACCCAGCCAGTGAAGCAGGAGAACCTGGCGGT...TGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCGGGCTGCCCGGCTCCTaGTTGTATGGGCGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLIPLGYGENQIRVQAGLPGS*LYGRMA Trigger: GGCCATGCGCCCATACAAGCAGGAGCCGGGCAGCCC...GGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSWGSRSRSLEGRSGGPGTTQ*LELPGR Trigger: CCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGG...GCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGACCCCAGGGCCTCACGTaGCCCTGCTGCATCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKGLSQGWVKAENSRRKGPQGLT*PCCIAQ Trigger: CTGGGCGATGCAGCAGGGCCACGTGAGGCCCTGGGG...TCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAGGGTGCGTGCCGCGGTaGCGCCGCAGGTGCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: EKGLSQGWVKAENSRRKGGCVPR*RRRCSL Trigger: TAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCC...TCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGAGGAGTCCCCAAGTCCCCTGTGCCTCAGATGCTCAGCTCCCACAACACGAGTGTGTCTTGCGGTaGCGCACCAGGTGCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRSPQVPCASDAQLPQHECVLR*RTRCSR Trigger: GCGCGAGCACCTGGTGCGCCACCGCAAGACACACTC...GTGTTGTGGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCAGGCAGGGAGGACCGGTaGCAGTGGAGCTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSFRLWREPDPGPGLFSPGREDR*QWSWWG Trigger: CCCCCACCAGCTCCACTGGCACCGGTCCTCCCTGCC...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACCGGTGGCGCCGCAGGTaGTCCTTACGCCGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GMREGEKGLSQGWVKAENRWRRR*SLRRNA Trigger: GGCATTCCGGCGTAAGGAGCACCTGCGGCGCCACCG...GTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCCGCCAGAGTGTGTCTTaGGGTGGCGCACCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSWGSRSRSLEGRSGGRQSVS*GGAPGA Trigger: AGCACCTGGTGCGCCACCGCAAGACACACTCTGGCG...GCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | CCCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDSVLGFKIKILGREEWGARHSA*SCQEGR Trigger: CCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGC...CCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGAGGAGTCCCCAAGTCCCCTGTGCCTCAGATGCTCAGCTCCCACAACACGGCTTCTCACCGGAGTaGCTTTGCCGGTGGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVRSPQVPCASDAQLPQHGFSPE*LCRWRS Trigger: ACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCC...GTGTTGTGGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | CCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCGGCTTCTCACCGGAGTaGCTTTGCCGGTGGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSWGSRSRSLEGRSGGGFSPE*LCRWRS Trigger: ACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCC...GCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAAGAGGCAATGGGGGAGTGTGTCTTGCGGTaGCGCACCAGGTGCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKGGVDMGPKREEAMGECVLR*RTRCSR Trigger: GCGCGAGCACCTGGTGCGCCACCGCAAGACACACTC...CCCCATTGCCTCTTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACCCACGCCTGGGTGTCTaGAGGGAGGGCGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMREGEKGLSQGWVKAENPRLGV*REGAQE Trigger: TTCCTGAGCGCCCTCCCTGCAGACACCCAGGCGTGG...GTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAGGACCCATCTGGGGAGGTTaGTGGGCCCCAGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGLSQGWVKAENSRRKGGPIWGG*WAPELL Trigger: GAGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGG...TCCTCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGGCAGGGAGGACCGGTaGCAGTGGAGCTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSFLGYLSPPHSFRLWRGREDR*QWSWWG Trigger: CCCCCACCAGCTCCACTGGCACCGGTCCTCCCTGCC...TCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGATAATGTGACTTCTCCAGCCTGTCTTACTGCACAAGACGGACACCTCTGCCAGTGGAGCTGGTaGGGGGCTGCCCGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AADNVTSPACLTAQDGHLCQWSW*GAARLL Trigger: CAGGAGCCGGGCAGCCCCCCACCAGCTCCACTGGCA...GAGGTGTCCGTCTTGTGCAGTAAGACAGGCTGGAGAAGTCACATTATCAGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHLIPLGYGENQIRVQAARHSA*SCQEGR Trigger: CCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGC...GGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGGGTGCGTGCCGCGGTaGCGCCGCAGGTGCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VTSFLGYLSPPHSFRLWRGCVPR*RRRCSL Trigger: TAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCC...TCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGATCTGCTCCTTCGTGTaGACTTCCGGCTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDSVLGFKIKILGREEWGICSFV*TSGWSQ Trigger: CTGGCTCCAGCCGGAAGTGCACACGAAGGAGCAGAT...CCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAGAACTCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAAGGGCTGCCCGGCTCCTaGTTGTATGGGCGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAENSRRKGGVDMGPKREGLPGS*LYGRMA Trigger: GGCCATGCGCCCATACAAGCAGGAGCCGGGCAGCCC...TTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGAGTTCTCAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAGAACTCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAACGGTGGCGCCGCAGGTaGTCCTTACGCCGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAENSRRKGGVDMGPKRERWRRR*SLRRNA Trigger: GGCATTCCGGCGTAAGGAGCACCTGCGGCGCCACCG...TTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGAGTTCTCAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTGAGGAGTCCCCAAGTCCCCTGTGCCTCAGATGCTCAGCTCCCACAACACGCCAGTAGAAGGTCTTaGCGCATTCGCAGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CVRSPQVPCASDAQLPQHASRRS*RIRSTR Trigger: ACGCGTGCTGCGAATGCGGCAAGACCTTCTACTGGC...GTGTTGTGGGAGCTGAGCATCTGAGGCACAGGGGACTTGGGGACTCCTCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCGACTCTGTCCTGGGGTTCAAGATCAAGATCCTTGGAAGGGAGGAGTGGGGGCGCCAGTAGAAGGTCTTaGCGCATTCGCAGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTLSWGSRSRSLEGRSGGASRRS*RIRSTR Trigger: ACGCGTGCTGCGAATGCGGCAAGACCTTCTACTGGC...GCCCCCACTCCTCCCTTCCAAGGATCTTGATCTTGAACCCCAGGACAGAGTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | TCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGCGCCAGAGTGTGTCTTaGGGTGGCGCACCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTSPHLIPLGYGENQIRRQSVS*GGAPGA Trigger: AGCACCTGGTGCGCCACCGCAAGACACACTCTGGCG...CCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACGCCTCCCGAAGCCCTTaGCACATTCCCAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GMREGEKGLSQGWVKAENASRSP*HIPSRR Trigger: TCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGC...GTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGAATAAAACTTGGGCATGGTGGCACATGCCTTTTAAGATCACAGACGACAGCCTCCTCTCCGCTCTaGGGCCGGCGGCTGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: PGIKLGHGGTCLLRSQTTASSPL*GRRLHT Trigger: GGTGTGCAGCCGCCGGCCCCAGAGCGGAGAGGAGGC...TGTCGTCTGTGATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTTATTCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGTGCCAGTGGAGCTGGTaGGGGGCTGCCCGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWCQWSW*GAARLL Trigger: CAGGAGCCGGGCAGCCCCCCACCAGCTCCACTGGCA...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMREGEKGLSQGWVKAENARHSA*SCQEGR Trigger: CCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGC...GTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAGGCTTCTCACCGGAGTaGCTTTGCCGGTGGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKGLSQGWVKAENSRRKGGFSPE*LCRWRS Trigger: ACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCC...TCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTACCGCCAGGTTCTCCTaGTTCACTGGCTGGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHLIPLGYGENQIRVQASTARFS*FTGWVV Trigger: AACGACCCAGCCAGTGAAGCAGGAGAACCTGGCGGT...AGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGTCCCAGAGTCTGCTCCACAGCAGACTGGGCAGACTTTATACCCAAACCCATCTGGGGAGGTTaGTGGGCCCCAGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDCPRVCSTADWADFIPKPIWGG*WAPELL Trigger: GAGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGG...TTTGGGTATAAAGTCTGCCCAGTCTGCTGTGGAGCAGACTCTGGGACAGTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAGAACTCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAACCCATCTGGGGAGGTTaGTGGGCCCCAGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAENSRRKGGVDMGPKREPIWGG*WAPELL Trigger: GAGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGG...TTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGAGTTCTCAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGTACGCCGGAATGCCTTaGCGCACTCAGGGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVTSFLGYLSPPHSFRYAGMP*RTQGTR Trigger: ACGCGTGCCCTGAGTGCGGCAAGGCATTCCGGCGTA...CCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCATACGCCGGAATGCCTTaGCGCACTCAGGGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HSFRLWREPDPGPGLFSPYAGMP*RTQGTR Trigger: ACGCGTGCCCTGAGTGCGGCAAGGCATTCCGGCGTA...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTGACCTGCCGGTGGCGCCGCAGGTaGTCCTTACGCCGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVHTESVTLLLSQVLVTCRWRRR*SLRRNA Trigger: GGCATTCCGGCGTAAGGAGCACCTGCGGCGCCACCG...GCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGTTCTCCTGCTTCACTaGCTGGGTCGTTGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPHLIPLGYGENQIRVQVLLLH*LGRWGL Trigger: GAGGCCCCAACGACCCAGCCAGTGAAGCAGGAGAAC...CTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTACCGCCAGGTTCTCCTaGTTCACTGGCTGGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYLSPPHSFRLWREPDPGTARFS*FTGWVV Trigger: AACGACCCAGCCAGTGAAGCAGGAGAACCTGGCGGT...ACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTGACCTGCCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVHTESVTLLLSQVLVTCPGTTQ*LELPGR Trigger: CCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGG...GCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGTTCCAGAAACAGCCCTCACCACCAGAGGGCAGCACTGCCTCAAAGGAGTTCTCCTGCTTCACTaGCTGGGTCGTTGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLVPETALTTRGQHCLKGVLLLH*LGRWGL Trigger: GAGGCCCCAACGACCCAGCCAGTGAAGCAGGAGAAC...TCCTTTGAGGCAGTGCTGCCCTCTGGTGGTGAGGGCTGTTTCTGGAACTAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | AGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCATaGGCCCCGACTCTGTCCTGGGGTTCAAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: REPDPGPGLFSP*APTLSWGSRSR Trigger: TCTTGATCTTGAACCCCAGGACAGAGTCGGGGCCAATGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | CATGGCCTCTGTCTGCACGACACCCCCACCTTCCCATaGTTCCATGCTCCTCCCAGTAACTTGAAAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGLCLHDTPTFP*FHAPPSNLKAC Trigger: GCAGGCTTTCAAGTTACTGGGAGGAGCATGGAACAATGGGAAGGTGGGGGTGTCGTGCAGACAGAGGCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCCGGAATAAAACTTGGGCATGGTGGCACATGCCTTTTAAGATCACAGACGACACCACGCCTGGGTGTCTaGAGGGAGGGCGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGIKLGHGGTCLLRSQTTPRLGV*REGAQE Trigger: TTCCTGAGCGCCCTCCCTGCAGACACCCAGGCGTGG...TGTCGTCTGTGATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTTATTCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGTCAGACTCCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRVRLLYTLSQSLYYSLRPGTTQ*LELPGR Trigger: CCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGG...CCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGCGCCAGAGTGTGTCTTaGGGTGGCGCACCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWRQSVS*GGAPGA Trigger: AGCACCTGGTGCGCCACCGCAAGACACACTCTGGCG...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATGCCTCCCGAAGCCCTTaGCACATTCCCAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLGYLSPPHSFRLWREPDASRSP*HIPSRR Trigger: TCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGC...ATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGGCCTCCCGAAGCCCTTaGCACATTCCCAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWASRSP*HIPSRR Trigger: TCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGC...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACGACATAGTGCATACTTATGATCTTCAAACTGGGGAGATGGAGACAGGAGGGTGCGTGCCGCGGTaGCGCCGCAGGTGCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDDIVHTYDLQTGEMETGGCVPR*RRRCSL Trigger: TAAGGAGCACCTGCGGCGCCACCGCGGCACGCACCC...TCCTGTCTCCATCTCCCCAGTTTGAAGATCATAAGTATGCACTATGTCGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | ATGATCTTCAAACTGGGGAGATGGAGACAGGAGAACCAGAAATCTGTGGTCACCGAGTGTGTCTTGCGGTaGCGCACCAGGTGCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MIFKLGRWRQENQKSVVTECVLR*RTRCSR Trigger: GCGCGAGCACCTGGTGCGCCACCGCAAGACACACTC...GGTGACCACAGATTTCTGGTTCTCCTGTCTCCATCTCCCCAGTTTGAAGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGACTGGGCAGACTTTATACCCAAAGAAGCGCATCCTGAAGAGAAGTTAGGCCTCACGTGGCCCTaGTGCATCGCCCAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TADWADFIPKEAHPEEKLGLTWP*CIAQVE Trigger: TTCCACCTGGGCGATGCAGCAGGGCCACGTGAGGCC...TAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTCTGCCCAGTCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | GTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAATCTGCTCCTTCGTGTaGACTTCCGGCTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSFLGYLSPPHSFRLWRICSFV*TSGWSQ Trigger: CTGGCTCCAGCCGGAAGTGCACACGAAGGAGCAGAT...TCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCCGGAATAAAACTTGGGCATGGTGGCACATGCCTTTTAAGATCACAGACGACATACGCCGGAATGCCTTaGCGCACTCAGGGCACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGIKLGHGGTCLLRSQTTYAGMP*RTQGTR Trigger: ACGCGTGCCCTGAGTGCGGCAAGGCATTCCGGCGTA...TGTCGTCTGTGATCTTAAAAGGCATGTGCCACCATGCCCAAGTTTTATTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CCA 90 bp | ATGCCATTACATAGAGTTCTGGTAAGGAAGCAGAGCCCAGGAGCTCAAAGCTGGGTTCTCCTGCTTCACTaGCTGGGTCGTTGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MPLHRVLVRKQSPGAQSWVLLLH*LGRWGL Trigger: GAGGCCCCAACGACCCAGCCAGTGAAGCAGGAGAAC...CCAGCTTTGAGCTCCTGGGCTCTGCTTCCTTACCAGAACTCTATGTAATGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | CCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGTGCTGGTGACCTGCACCGCCAGGTTCTCCTaGTTCACTGGCTGGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVHTESVTLLLSQVLVTCTARFS*FTGWVV Trigger: AACGACCCAGCCAGTGAAGCAGGAGAACCTGGCGGT...GCAGGTCACCAGCACCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCGGGTACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATATCTGCTCCTTCGTGTaGACTTCCGGCTGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLGYLSPPHSFRLWREPDICSFV*TSGWSQ Trigger: CTGGCTCCAGCCGGAAGTGCACACGAAGGAGCAGAT...ATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGTACCCGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | TTCTCTTCTATCAGATTCAAGGTATCTGGACTTATGTaGACGCCCGTGGCCCATCTGGAGGTGAGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSIRFKVSGLM*TPVAHLEVSFV Trigger: CACAAAACTCACCTCCAGATGGGCCACGGGCGTCAACATAAGTCCAGATACCTTGAATCTGATAGAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | CACCAACACCAGCACTTGTTATCTATTTATTTGGGGTaGTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQHQHLLSIYLG*FQTGFLCVALA Trigger: AGCCAGGGCTACACAGAGAAACCCTGTCTGGAACAACCCCAAATAAATAGATAACAAGTGCTGGTGTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | ATTCAACACCAACACCAGCACTTGTTATCTATTTATTaGGGGTTGTTCCAGACAGGGTTTCTCTGTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQHQHQHLLSIY*GLFQTGFLCVA Trigger: GGCTACACAGAGAAACCCTGTCTGGAACAACCCCAAATAAATAGATAACAAGTGCTGGTGTTGGTGTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| 3UTR CAA 72 bp | AAGTGTGTGTTCACTATTCAACACCAACACCAGCACTaGTTATCTATTTATTTGGGGTTGTTCCAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCVFTIQHQHQH*LSIYLGLFQTG Trigger: CCCTGTCTGGAACAACCCCAAATAAATAGATAACAAGTGCTGGTGTTGGTGTTGAATAGTGAACACACACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| CDS GCA 90 bp | CAAGGGAGACTTCCCGCACTCCGGGCACGACACAGTGCCTGGAGCTaGCAGGAAGGCAGGGAGGACCGGTGCCAGTGGAGCTGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGRLPALRARHSAWS*QEGREDRCQWSWWG Trigger: CCCCCACCAGCTCCACTGGCACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTCTCCCTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108565.8 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS GCA 90 bp | GCGCCGGCTTCAAGGGAGACTTCCCGCACTCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGGCAGGGAGGACCGGTGCCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: APASRETSRTPGTTQ*LELPGRQGGPVPVE Trigger: CTCCACTGGCACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTCTCCCTTGAAGCCGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS TCA 90 bp | CAGAGCCCAGGGCGGAAAGGCACCACCACCCTCTGGACCTGGTGCTaGAGTCCCTTGAGCTACCGCGGCCGCCCGGCCATGGATACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSPGRKGTTTLWTWC*SPLSYRGRPAMDTL Trigger: CAGCGTATCCATGGCCGGGCGGCCGCGGTAGCTCAAGGGACTTCAGCACCAGGTCCAGAGGGTGGTGGTGCCTTTCCGCCCTGGGCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CCA 90 bp | CGGCTTCAAGGGAGACTTCCCGCACTCCGGGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGGGAGGACCGGTGCCAGTGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLQGRLPALRARHSA*SCQEGREDRCQWSW Trigger: CCAGCTCCACTGGCACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTCTCCCTTGAAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CCA 90 bp | CACTCAGGGCACGCGTGCGGCTTCTCACCGGAGTGGCTTTGCCGGTaGCGCAGTAGATGCGCCGGCTTCAAGGGAGACTTCCCGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGHACGFSPEWLCR*RSRCAGFKGDFPHS Trigger: GGAGTGCGGGAAGTCTCCCTTGAAGCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTGCCCTGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS GCA 90 bp | GGATACGCTGGTGACGGAGCACATGCTCACGCCTCCCGAAGCCCTTaGCACATTCCCAGCAGGCGAAAGGTCGCGCGCCAGAGTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYAGDGAHAHASRSP*HIPSRRKVARQSVS Trigger: AGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGCGTGAGCATGTGCTCCGTCACCAGCGTATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAGGAAGGGAGGAGTGGATATGGGGCCCAAAAGGGAAGAGGCAATGGGGGCGCCAGAGTGTGTCTaGCGGTGGCGCACCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRKGGVDMGPKREEAMGAPECV*RWRTRC Trigger: GCACCTGGTGCGCCACCGCAAGACACACTCTGGCGC...CCCCATTGCCTCTTCCCTTTTGGGCCCCATATCCACTCCTCCCTTCCTTCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTACCCATCTGGGGAGGTaGCTGGGCCCCAGAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHLIPLGYGENQIRVQASTHLGR*LGPRAP Trigger: AGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGGT...AGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | GGTGACCTGCCATCTGTGACAAGCTTTCTCGGGTACCTCTCCCCACCTCATTCCCCCGAGGTGCCCTCATaGCTGACGACCCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GDLPSVTSFLGYLSPPHSPEVPS*LTTHLG Trigger: CCCCAGATGGGTCGTCAGCAATGAGGGCACCTCGGG...GGAATGAGGTGGGGAGAGGTACCCGAGAAAGCTTGTCACAGATGGCAGGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | GGAATGAGGGAAGGAGAGAAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACCGCCTCCCGAAGCCCTaGCCACATTCCCAGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GMREGEKGLSQGWVKAENRLPKP*PHSQQA Trigger: CGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGCG...GTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTTCTCTCCTTCCCTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | AAGGGTCTTTCGCAGGGGTGGGTGAAAGCTGAGAACTCCAGAAGGAAGGGAGGAACCCATCTGGGGAGGTaGCTGGGCCCCAGAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLSQGWVKAENSRRKGGTHLGR*LGPRAP Trigger: AGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGGT...TCCTCCCTTCCTTCTGGAGTTCTCAGCTTTCACCCACCCCTGCGAAAGACCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCCCCACCTCATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGCCCGAGGTGCCCTCATaGCTGACGACCCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPHLIPLGYGENQIRVQPEVPS*LTTHLG Trigger: CCCCAGATGGGTCGTCAGCAATGAGGGCACCTCGGG...CTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATGAGGTGGGGAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCAGCGCCAGAGTGTGTCTaGCGGTGGCGCACCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSFRLWREPDPGPGLFSPAPECV*RWRTRC Trigger: GCACCTGGTGCGCCACCGCAAGACACACTCTGGCGC...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCACGCCTCCCGAAGCCCTaGCCACATTCCCAGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HSFRLWREPDPGPGLFSPRLPKP*PHSQQA Trigger: CGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGCG...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS TCA 90 bp | AGGAGGTTCCTAAGGGAATTGCCCCACTTTCTTCCTTTCCAACACTaGCCCCCGGGCCTTCGGTCACATCCCGAGGTGCCCTCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRFLRELPHFLPFQH*PPGLRSHPEVPSLL Trigger: CAGCAATGAGGGCACCTCGGGATGTGACCGAAGGCCCGGGGGTCAGTGTTGGAAAGGAAGAAAGTGGGGCAATTCCCTTAGGAACCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGAGTCAGACTCCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGCGCCTCCCGAAGCCCTaGCCACATTCCCAGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRVRLLYTLSQSLYYSLRRLPKP*PHSQQA Trigger: CGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGCG...CCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CTCATTCTGAATGTGTCTATCAAGTGTGACCAGCACCATCTGCTGAAGATGCCAACCCATCTGGGGAGGTaGCTGGGCCCCAGAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LILNVSIKCDQHHLLKMPTHLGR*LGPRAP Trigger: AGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGGT...TGGCATCTTCAGCAGATGGTGCTGGTCACACTTGATAGACACATTCAGAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | GACTTTATACCCAAAGAAGCGCATCCTGAAGAGAAGTTAGGTCTAGATTCCTGGGCGCCAGAGTGTGTCTaGCGGTGGCGCACCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DFIPKEAHPEEKLGLDSWAPECV*RWRTRC Trigger: GCACCTGGTGCGCCACCGCAAGACACACTCTGGCGC...CCAGGAATCTAGACCTAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CATTCCTTTAGGCTATGGAGAGAACCAGATCCGGGTCCAGGCCTCTTCTCTCCAAGGTTCCTAAGGGAATaGCCCCACTTTCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSFRLWREPDPGPGLFSPRFLRE*PHFLPF Trigger: GAAAGGAAGAAAGTGGGGCAATTCCCTTAGGAACCT...TGGAGAGAAGAGGCCTGGACCCGGATCTGGTTCTCTCCATAGCCTAAAGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGAGTCAGACTCCTGTACACACTGAGTCAGTCACTTTATTACTCTCTCAGGAGGTTCCTAAGGGAATaGCCCCACTTTCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRLLYTLSQSLYYSLRRFLRE*PHFLPF Trigger: GAAAGGAAGAAAGTGGGGCAATTCCCTTAGGAACCT...CCTGAGAGAGTAATAAAGTGACTGACTCAGTGTGTACAGGAGTCTGACTCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS-3UTR CAA 90 bp | GACTTTATACCCAAAGAAGCGCATCCTGAAGAGAAGTTAGGTCTAGATTCCTGGAGGTTCCTAAGGGAATaGCCCCACTTTCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFIPKEAHPEEKLGLDSWRFLRE*PHFLPF Trigger: GAAAGGAAGAAAGTGGGGCAATTCCCTTAGGAACCT...CCAGGAATCTAGACCTAACTTCTCTTCAGGATGCGCTTCTTTGGGTATAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054680.12 ENSMUST00000108567.9 |
||
| CDS TCA 72 bp | GGGCGGAAAGGCACCACCACCCTCTGGACCTGGTGCTaGAGTCCCTTGAGCTACCGCGGCCGCCCGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GRKGTTTLWTWC*SPLSYRGRPAM Trigger: CATGGCCGGGCGGCCGCGGTAGCTCAAGGGACTTCAGCACCAGGTCCAGAGGGTGGTGGTGCCTTTCCGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS GCA 72 bp | CTTCCCGCACTCCGGGCACGACACAGTGCCTGGAGCTaGCAGGAAGGCAGGGAGGACCGGTGCCAGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPALRARHSAWS*QEGREDRCQWS Trigger: GCTCCACTGGCACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108565.8 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CCA 72 bp | GGGAGACTTCCCGCACTCCGGGCACGACACAGTGCCTaGAGCTGCCAGGAAGGCAGGGAGGACCGGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRLPALRARHSA*SCQEGREDRCQ Trigger: CTGGCACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108565.8 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CAA 72 bp | CCCCCGGGCCTTCGGTCACATCCCGAGGTGCCCTCATaGCTGACGACCCATCTGGGGAGGTTGCTGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGLRSHPEVPS*LTTHLGRLLGP Trigger: GGGGCCCAGCAACCTCCCCAGATGGGTCGTCAGCAATGAGGGCACCTCGGGATGTGACCGAAGGCCCGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 ENSMUST00000136777.2 |
||
| CDS TCA 72 bp | GCACCACCACCCTCTGGACCTGGTGCTGAAGTCCCTTaGGCTACCGCGGCCGCCCGGCCATGGATACGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: APPPSGPGAEVP*ATAAARPWIRW Trigger: CCAGCGTATCCATGGCCGGGCGGCCGCGGTAGCTCAAGGGACTTCAGCACCAGGTCCAGAGGGTGGTGGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS TCA 72 bp | CGGGCCTTCGGTCACATCCCGAGGTGCCCTCATTGCTaGCGACCCATCTGGGGAGGTTGCTGGGCCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAFGHIPRCPHC*RPIWGGCWAPE Trigger: CTCTGGGGCCCAGCAACCTCCCCAGATGGGTCGTCAGCAATGAGGGCACCTCGGGATGTGACCGAAGGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 ENSMUST00000136777.2 |
||
| CDS GCA 72 bp | TCAAGGGAGACTTCCCGCACTCCGGGCACGACACAGTaGCTGGAGCTGCCAGGAAGGCAGGGAGGACCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRETSRTPGTTQ*LELPGRQGGPV Trigger: CACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTCTCCCTTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054680.12 ENSMUST00000108565.8 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS GCA 72 bp | TCAGGGCACGCGTGCGGCTTCTCACCGGAGTGGCTTTaGCGGTGGCGCAGTAGATGCGCCGGCTTCAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGHACGFSPEWL*RWRSRCAGFKG Trigger: TCCCTTGAAGCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTGCCCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS GCA 72 bp | GGTGACGGAGCACATGCTCACGCCTCCCGAAGCCCTTaGCACATTCCCAGCAGGCGAAAGGTCGCGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GDGAHAHASRSP*HIPSRRKVARQ Trigger: CTGGCGCGCGACCTTTCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGAGGCGTGAGCATGTGCTCCGTCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CAA 90 bp | TGCCCGGCTCCTGCTTGTATGGGCGCATGGCCCCGCTGTTCTCCGTaGCGGGTACCTCTGTCCCAGAGGAGGTTCCCAGAGCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPAPACMGAWPRCSP*RVPLSQRRFPELLQ Trigger: CTGGAGGAGCTCTGGGAACCTCCTCTGGGACAGAGGTACCCGCAACGGAGAACAGCGGGGCCATGCGCCCATACAAGCAGGAGCCGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS GCA 72 bp | TTCTCACCGGAGTGGCTTTGCCGGTGGCGCAGTAGATaGGCCGGCTTCAAGGGAGACTTCCCGCACTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSPEWLCRWRSR*AGFKGDFPHSG Trigger: CCCGGAGTGCGGGAAGTCTCCCTTGAAGCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CCA 72 bp | CACGCGTGCGGCTTCTCACCGGAGTGGCTTTGCCGGTaGCGCAGTAGATGCGCCGGCTTCAAGGGAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HACGFSPEWLCR*RSRCAGFKGDF Trigger: GAAGTCTCCCTTGAAGCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS CAA 72 bp | CCTGCTTGTATGGGCGCATGGCCCCGCTGTTCTCCGTaGCGGGTACCTCTGTCCCAGAGGAGGTTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PACMGAWPRCSP*RVPLSQRRFPE Trigger: CTCTGGGAACCTCCTCTGGGACAGAGGTACCCGCAACGGAGAACAGCGGGGCCATGCGCCCATACAAGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108565.8 |
||
| CDS CAA 72 bp | CCTGCTTGTATGGGCGCATGGCCCCGCTGTTCTCCGTaGCGGGTACCTCTGTCCCAGAGGAGGTTCCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PACMGAWPRCSP*RVPLSQRRFLR Trigger: CCTTAGGAACCTCCTCTGGGACAGAGGTACCCGCAACGGAGAACAGCGGGGCCATGCGCCCATACAAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||
| CDS TCA 72 bp | CTAAGGGAATTGCCCCACTTTCTTCCTTTCCAACACTaGCCCCCGGGCCTTCGGTCACATCCCGAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRELPHFLPFQH*PPGLRSHPEVP Trigger: GGGCACCTCGGGATGTGACCGAAGGCCCGGGGGTCAGTGTTGGAAAGGAAGAAAGTGGGGCAATTCCCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054680.12 ENSMUST00000108566.8 ENSMUST00000108567.9 |
||