Pregenerated sensors for ZFP442 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068130Ensembl transcript IDs: ENSMUST00000109916.8, ENSMUST00000185796.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCCATCTCCCTCCCTCCATCTGCTGCTTATGACTATTTTGGTTaGGCTAGGTTAACCTCTTTTATAAGCTGCTTTAGACATAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: HPISLPPSAAYDYFG*ARLTSFISCFRHSV Trigger: AACACTATGTCTAAAGCAGCTTATAAAAGAGGTTAACCTAGCTCAACCAAAATAGTCATAAGCAGCAGATGGAGGGAGGGAGATGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| 3UTR CAA 90 bp | GTTGAGGAATATAAGTGCAAACAAAATAAACAAGGTTTACTGTGTTaGCAAGTGCAGACAAAAGAAAGAGGCACATCACATCGTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: VEEYKCKQNKQGLLC*QVQTKERGTSHRNA Trigger: AGCATTACGATGTGATGTGCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTTGCACTTATATTCCTCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| 3UTR TCA 72 bp | TCCCTCCCTCCATCTGCTGCTTATGACTATTTTGGTTaGGCTAGGTTAACCTCTTTTATAAGCTGCTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: SLPPSAAYDYFG*ARLTSFISCFR Trigger: TCTAAAGCAGCTTATAAAAGAGGTTAACCTAGCTCAACCAAAATAGTCATAAGCAGCAGATGGAGGGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| 3UTR CAA 72 bp | TTTCCTGTAGATTTCCCCTTCCTTCTCTCCCATAAATaGTATATTTCCATTCATATTCGTGGCCATCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: FPVDFPFLLSHK*YISIHIRGHLA Trigger: GGCTAGATGGCCACGAATATGAATGGAAATATACAATTTATGGGAGAGAAGGAAGGGGAAATCTACAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR TCA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACTGTTGGAGACCACTCTaGCATGCAAAGGATTTACCA | + |
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Preference number: 4 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDCWRPL*HAKDLP Trigger: TGGTAAATCCTTTGCATGTCAGAGTGGTCTCCAACA...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR TCA 90 bp | AAACAAAATAAACAAGGTTTACTGTGTTTGCAAGTGCAGACAAAAGAAAGAGGCGAGACTGCTGTTTTGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: KQNKQGLLCLQVQTKERGETAVL*KGFTTL Trigger: CAATGTGGTAAAGCCTTTTCACAAAACAGCAGTCTC...GCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCCAGATCACTTTGACATaGAAAGGCTTTACCACATCG | + |
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Preference number: 4 (lower is better) Translates to: PSVWISYIKMKTIEMYKGQITLT*KGFTTS Trigger: CGATGTGGTAAAGCCTTTGCATGTCAAAGTGATCTG...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR TCA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACATTTGGAGACTACTGTaGTATGCAAATGCCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDIWRLL*YANASR Trigger: TCTTGAGGCATTTGCATATCACAGTAGTCTCCAAAT...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR GCA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACAAGATGACTGTGTTGTaGAAAGTCAGTACCACATTG | + |
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Preference number: 4 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDKMTVL*KVSTTL Trigger: CAATGTGGTACTGACTTTGCACAACACAGTCATCTT...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| 3UTR CAA 72 bp | TATAAGTGCAAACAAAATAAACAAGGTTTACTGTGTTaGCAAGTGCAGACAAAAGAAAGAGGCACATCACAT | + |
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Preference number: 4 (lower is better) Translates to: YKCKQNKQGLLC*QVQTKERGTSH Trigger: ATGTGATGTGCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTTGCACTTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR GCA 90 bp | AAACAAAATAAACAAGGTTTACTGTGTTTGCAAGTGCAGACAAAAGAAAGAGGCTATGTAATTGGAGACTaGTGTTTTGTGAAAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KQNKQGLLCLQVQTKERGYVIGD*CFVKRL Trigger: AAGCCTTTTCACAAAACAGCAGTCTCCAATTACATA...GCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR GCA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACGTCGTACAAAATGGTTaGTTTGTGCAAAGAATTTAC | + |
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Preference number: 4 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDVVQNG*FVQRIY Trigger: GTAAATTCTTTGCACAAAGCAACCATTTTGTACGAC...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCCTCTCCAGTATGAATTaGTTGATGCCCCTGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: PSVWISYIKMKTIEMYKGLSSMN*LMPLRM Trigger: CATCCTCAGGGGCATCAACAAATTCATACTGGAGAG...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCCTGTTGCAGATCACTTaGACATGCAAAGGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: PSVWISYIKMKTIEMYKGLLQIT*TCKGFT Trigger: GGTAAAGCCTTTGCATGTCAAAGTGATCTGCAACAG...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCCTTTTGCAGACCACTTaGAAACCCAAAGGCTTTACC | + |
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Preference number: 5 (lower is better) Translates to: PSVWISYIKMKTIEMYKGLLQTT*KPKGFT Trigger: GGTAAAGCCTTTGGGTTTCAAAGTGGTCTGCAAAAG...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACCATTCTTTCATGCTGTaGAAGATGACTGTGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDHSFML*KMTVLC Trigger: GCACAACACAGTCATCTTCAACAGCATGAAAGAATG...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCATTCAGGAGACTAGCTaGACATGCAAATGCCTTATC | + |
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Preference number: 5 (lower is better) Translates to: PSVWISYIKMKTIEMYKGIQETS*TCKCLI Trigger: GATAAGGCATTTGCATGTCAAGCTAGTCTCCTGAAT...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACGGAGATTACTGTGATTaGCAAAGGCTTTGCCACATT | + |
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Preference number: 5 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDGDYCD*QRLCHI Trigger: AATGTGGCAAAGCCTTTGCAAATCACAGTAATCTCC...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTATGGATTTCTTACATAAAGATGAAGACGATAGAAATGTACAAAGGCATACAGGAGACTAGTTaGACATGCAAAGGCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: PSVWISYIKMKTIEMYKGIQETS*TCKGFI Trigger: GATAAAGCCTTTGCATGTCAAACTAGTCTCCTGTAT...GCCTTTGTACATTTCTATCGTCTTCATCTTTATGTAAGAAATCCATACTGAAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAATAAACAAGGTTTACTGTGTTTGCAAGTGCAGACAAAAGAAAGAGGCGGAGATTACTATTACTaGCAAAGGCTTTGCCACATT | + |
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Preference number: 5 (lower is better) Translates to: KQNKQGLLCLQVQTKERGGDYYY*QRLCHI Trigger: AATGTGGCAAAGCCTTTGCAAGTAATAGTAATCTCC...GCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAATAAACAAGGTTTACTGTGTTTGCAAGTGCAGACAAAAGAAAGAGGCTATCTGAAGATAACTTaGAAGTACAAAGGCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: KQNKQGLLCLQVQTKERGYLKIT*KYKGFA Trigger: GGCAAAGCCTTTGTACTTCAAAGTTATCTTCAGATA...GCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAATAAACAAGGTTTACTGTGTTTGCAAGTGCAGACAAAAGAAAGAGGCTGTTCTTTTATGCACTaGGAGATTACTGTGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: KQNKQGLLCLQVQTKERGCSFMH*EITVIC Trigger: GCAAATCACAGTAATCTCCAAGTGCATAAAAGAACA...GCCTCTTTCTTTTGTCTGCACTTGCAAACACAGTAAACCTTGTTTATTTTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS-3UTR CAA 90 bp | AGTGTACATTCACAGTTTCCCTTCAGTATGGATTTCTTACATAAAGATGAAGACTCTCTCCTGTATGTGTaGTGTTCTTTTATGATACTG | + |
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Preference number: 5 (lower is better) Translates to: SVHSQFPFSMDFLHKDEDSLLYV*CSFMIL Trigger: CAGTATCATAAAAGAACACAACACATACAGGAGAGA...GTCTTCATCTTTATGTAAGAAATCCATACTGAAGGGAAACTGTGAATGTACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109916.8 |
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| CDS CAA 90 bp | TTTTCCACTTTGCTTACATTTAACAGTATGCATTCTTTCATGCTGTaGAAGATGACTGTGTTGTGCAAAGTCAGTACCACATTGATTACA | + |
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Preference number: 6 (lower is better) Translates to: FSTLLTFNSMHSFML*KMTVLCKVSTTLIT Trigger: TGTAATCAATGTGGTACTGACTTTGCACAACACAGTCATCTTCAACAGCATGAAAGAATGCATACTGTTAAATGTAAGCAAAGTGGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109916.8 ENSMUST00000185796.2 |
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