RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP438 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050945

Ensembl transcript IDs: ENSMUST00000063989.7, ENSMUST00000234241.2

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTCTGTACACTGGCCCTaGCCCTGGAGTACTGGATCC +
Preference number: 2 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSSVHWP*PWSTGS
Trigger: GGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGGACCAGAGAAGCTTaGCGGGGTGCTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGTREA*RGAGSQ
Trigger: CTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGGGACCAGAGAAGCTTaGCGGGGTGCTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILGTREA*RGAGSQ
Trigger: CTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGAGCATAGTTCTGGGTaGGCATGCCCAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSEHSSG*ACPEAW
Trigger: CCAAGCCTCTGGGCATGCCCACCCAGAACTATGCTC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGCAACCCTGGGCTTCTaGTCTCTGGCTTCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLATLGF*SLASWG
Trigger: TCCCCAAGAAGCCAGAGACCAGAAGCCCAGGGTTGC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCTTGACCTAGGCTGCTaGGAGCCTGAGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLLDLGC*EPETAQ
Trigger: CTGTGCTGTCTCAGGCTCCCAGCAGCCTAGGTCAAG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCCAGCCATTCCCCACTaGCCACCTTCACTTCCTACC +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLPAIPH*PPSLPT
Trigger: GGTAGGAAGTGAAGGTGGCCAGTGGGGAATGGCTGG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTGGATTCACTGTaGAGCTCAGGAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLSLDSL*SSGAPC
Trigger: GCAGGGTGCTCCTGAGCTCCACAGTGAATCCAGGCT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGACATTCTGGGCTTCTaGACTGGCTGGGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILDILGF*TGWAEA
Trigger: TGCCTCAGCCCAGCCAGTTCAGAAGCCCAGAATGTC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCTTCCGCCCAAGCATCTaGGCACAGAGCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLFRPSI*AQSRQL
Trigger: TAACTGCCTGCTCTGTGCTCAGATGCTTGGGCGGAA...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGTTCTGGGTGGGCATaGCCAGAGGCTTGGGCATTA +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLSSGWA*PEAWAL
Trigger: TAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAGTTCTGGGTGGGCATaGCCAGAGGCTTGGGCATTA +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSSSGWA*PEAWAL
Trigger: TAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGCACAACCTGCCTTCTaGATACTTGCTGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSAQPAF*ILAGRL
Trigger: GAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGTGC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGTGAAGTTTCATATGTaGACTCAGGCTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLVKFHM*TQAAGA
Trigger: CGCCCCGGCAGCCTGAGTGCACATATGAAACTTCAC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCTGATCACAACCCTGTaGACCTCCTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLLITTL*TSFRWP
Trigger: CGGCCATCTGAAGGAGGTGCACAGGGTTGTGATCAG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTCCTCTCTGTGTACTaGTTCTGGTGGGGAGCATCC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLLSVY*FWWGAS
Trigger: GGATGCTCCCCACCAGAAGCAGTACACAGAGAGGAG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCACTGGAGCCACTCTTaGGAGAGCTCAGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSHWSHS*ESSGPV
Trigger: AACAGGACCTGAGCTCTCCCAAGAGTGGCTCCAGTG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTGGGTGCCTCCTTCCTaGCACAACCTGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILWVPPS*HNLPSA
Trigger: TGCAGAAGGCAGGTTGTGCCAGGAAGGAGGCACCCA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCACTCTAGGGAATGCTaGAGAGTCCTCCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLHSREC*RVLQRG
Trigger: GCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGGGGAAGAGGTCAAATaGCATAGCTGGGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILGEEVK*HSWDGP
Trigger: TGGCCCATCCCAGCTATGTCATTTGACCTCTTCCCC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGGGAGGGCTCTGTGCTaGTCACAACCCTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLGRALC*SQPCAP
Trigger: AGGTGCACAGGGTTGTGATCAGCACAGAGCCCTCCC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGTTTCCCTCTCCAGTaGGTTGTCAGGTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGFPLQ*VVRSLH
Trigger: ATGCAAGGACCTGACAACTCACTGGAGAGGGAAACC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTCCTTGAAGCAACCCTaGGCTTCTGGTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSSLKQP*ASGLWL
Trigger: AAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTTTTGGTGTGTCTCCTaGCTGCAGTTCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSFWCVS*LQFTGG
Trigger: TCCCCCAGTGAACTGCAGCCAGGAGACACACCAAAA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGACATTCTGGGCTTCTaGACTGGCTGGGCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLDILGF*TGWAEA
Trigger: TGCCTCAGCCCAGCCAGTTCAGAAGCCCAGAATGTC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCAAAAGACTGAGCAGTaGTCTGACAACGGCCACATC +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLQKTEQ*SDNGHI
Trigger: GATGTGGCCGTTGTCAGATCACTGCTCAGTCTTTTG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTGCCTTCTGCATACTTaGTGGGAGGCTCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILCLLHT*WEALLG
Trigger: TCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTCTTCCTGGCACAACCTaGCTTCTGCATACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLPGTT*LLHTCW
Trigger: CCAGCAAGTATGCAGAAGGCAGGTTGTGCCAGGAAG...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGAGCAGGTGTAGTGGGTaGCTCCTTCCTGGCACAACC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLSRCSG*LLPGTT
Trigger: GGTTGTGCCAGGAAGGAGGCACCCACTACACCTGCT...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGCAACTGAACTGCACTaGTCAAGACAGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLATELH*SRQSVQ
Trigger: CTGCACAGACTGTCTTGAGCAGTGCAGTTCAGTTGC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGCAACTGAACTGCACTaGTCAAGACAGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSATELH*SRQSVQ
Trigger: CTGCACAGACTGTCTTGAGCAGTGCAGTTCAGTTGC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGGACTCAAATCTCCTTaGCCAACACCACTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLGLKSP*PTPLVS
Trigger: ACTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGACTCAAATCTCCTTaGCCAACACCACTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGLKSP*PTPLVS
Trigger: ACTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTTCTGCATACTTGCTaGGAGGCTCTGTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLLHTC*EALLGR
Trigger: TCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTCCTTGAAGCAACCCTaGGCTTCTGGTCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILSLKQP*ASGLWL
Trigger: AAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCTTGACCTAGGCTGCTaGGAGCCTGAGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLLDLGC*EPETAQ
Trigger: CTGTGCTGTCTCAGGCTCCCAGCAGCCTAGGTCAAG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCCCTTGGTCAGAAATTaGGGAAGGGCAGGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLPLVRN*GRAGKH
Trigger: GTGCTTCCCTGCCCTTCCTCAATTTCTGACCAAGGG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCACTACAGAGAGCAACTaGACTGCACTGCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLTTESN*TALLKT
Trigger: TGTCTTGAGCAGTGCAGTTCAGTTGCTCTCTGTAGT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCATCAAACCCTTCTGTaGTGGACAGTCTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSHQTLL*WTVSHH
Trigger: GTGATGAGAGACTGTCCATCACAGAAGGGTTTGATG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGAGCCAAGACATTTTaGAGGCAGGGCATTATTCAG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGAKTF*RQGIIQ
Trigger: CTGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTCAAAAGACTGAGCAGTaGTCTGACAACGGCCACATC +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILQKTEQ*SDNGHI
Trigger: GATGTGGCCGTTGTCAGATCACTGCTCAGTCTTTTG...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGCACAACCTGCCTTCTaGATACTTGCTGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLAQPAF*ILAGRL
Trigger: GAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGTGC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAGAGAGCAACTGAACTaGACTGCTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSREQLN*TAQDSL
Trigger: CAGACTGTCTTGAGCAGTGCAGTTCAGTTGCTCTCT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTTTCACTCTAGGGAATaGTGGAGAGTCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSFHSRE*WRVLQR
Trigger: TCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCACTGGAGCCACTCTTaGGAGAGCTCAGGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLHWSHS*ESSGPV
Trigger: AACAGGACCTGAGCTCTCCCAAGAGTGGCTCCAGTG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTCTTCTGCATACTTGCTaGGAGGCTCTGTTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLLHTC*EALLGR
Trigger: TCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAG...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTTGGTAAGGGCAGGATaGGCAGTTTACCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLVRAG*AVYPWV
Trigger: TACCCAAGGGTAAACTGCCCATCCTGCCCTTACCAA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTGCTGGCTATTTCTGTaGCTGCATCAAACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSCWLFL*LHQTLL
Trigger: CAGAAGGGTTTGATGCAGCCACAGAAATAGCCAGCA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCTGCTGGCTATTTCTGTaGCTGCATCAAACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLCWLFL*LHQTLL
Trigger: CAGAAGGGTTTGATGCAGCCACAGAAATAGCCAGCA...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTGGTCTCTGGCTTCTTaGGGACTGTTTCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSWSLAS*GLFLAL
Trigger: AAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCACTCTAGGGAATGCTaGAGAGTCCTCCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLHSREC*RVLQRG
Trigger: GCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTACTACAGAGAGCAACTaGACTGCACTGCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILTTESN*TALLKT
Trigger: TGTCTTGAGCAGTGCAGTTCAGTTGCTCTCTGTAGT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGGTTTCCCTCTCCAGTaGGTTGTCAGGTCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLGFPLQ*VVRSLH
Trigger: ATGCAAGGACCTGACAACTCACTGGAGAGGGAAACC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCATCTTCTTCCAAACTTaGCTTGGTTTCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSIFFQT*LGFPLQ
Trigger: CTGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGAT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCTTCCTGGCACAACCTaGCTTCTGCATACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLLPGTT*LLHTCW
Trigger: CCAGCAAGTATGCAGAAGGCAGGTTGTGCCAGGAAG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTAGAGAGCAACTGAACTaGACTGCTCAAGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILREQLN*TAQDSL
Trigger: CAGACTGTCTTGAGCAGTGCAGTTCAGTTGCTCTCT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGCTATTTCTGTGGCTaGATCAAACCCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGYFCG*IKPFCD
Trigger: ATCACAGAAGGGTTTGATGCAGCCACAGAAATAGCC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTTTCACATGCACTCTaGTTAGACCCATGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLSHAL*LDPCKA
Trigger: TGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTTGGGGACTGTTTCTTaGTCTTTCTATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLGTVS*SFYAIS
Trigger: GGAGATGGCATAGAAAGAGCAAGAAACAGTCCCCAA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCATTGAAAGTGGTAGTTaGAGACTGGACACATGTGCC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSIESGS*RLDTCA
Trigger: GGCACATGTGTCCAGTCTGCAACTACCACTTTCAAT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCGGCCACATCTGATTTaGAATTTGACTTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSRPHLI*NLTSSA
Trigger: GGCAGATGAAGTCAAATTGCAAATCAGATGTGGCCG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTAGAGTCAGACTCCCTTaGTCAGAAATTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILRVRLP*SEIEEG
Trigger: CCCTTCCTCAATTTCTGACCAAGGGAGTCTGACTCT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCATGTGTGGACATTCTaGGCTTCTGAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLHVWTF*ASELAG
Trigger: CCCAGCCAGTTCAGAAGCCCAGAATGTCCACACATG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGCTGGGAGGCTCTGTTaGGAAGAAGAGTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLAGRLC*EEESSV
Trigger: TACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAAGCAGCTATCTTGCTaGCTATTTCTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLKQLSC*LFLWLH
Trigger: ATGCAGCCACAGAAATAGCCAGCAAGATAGCTGCTT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAAGCAGCTATCTTGCTaGCTATTTCTGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSKQLSC*LFLWLH
Trigger: ATGCAGCCACAGAAATAGCCAGCAAGATAGCTGCTT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTGGGCTTCTGGTCTCTaGCTTCTTGGGGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLWASGL*LLGDCF
Trigger: GAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTCCAGAACGGATGTTTaGTTCACCTTGATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSSRTDV*FTLIFW
Trigger: CCAAAAGATCAAGGTGAATCAAACATCCGTTCTGGA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTTGGGGACTGTTTCTTaGTCTTTCTATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLGTVS*SFYAIS
Trigger: GGAGATGGCATAGAAAGAGCAAGAAACAGTCCCCAA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTATTGAAAGTGGTAGTTaGAGACTGGACACATGTGCC +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILIESGS*RLDTCA
Trigger: GGCACATGTGTCCAGTCTGCAACTACCACTTTCAAT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAGCTGTCACTTTGCTTaGAGCCAAGACATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSSCHFA*SQDILK
Trigger: CTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGTGTGTGTATTCATGTaGTCTAGAAGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLVCVFM*SRRWCL
Trigger: CAAACACCACCTTCTAGACCACATGAATACACACAC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGTGTGTGTATTCATGTaGTCTAGAAGGTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSVCVFM*SRRWCL
Trigger: CAAACACCACCTTCTAGACCACATGAATACACACAC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTCTTCCAAACTTGACTTaGTTTCCCTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLPNLT*FPSPVS
Trigger: ACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAG...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTCCAGAACGGATGTTTaGTTCACCTTGATCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILSRTDV*FTLIFW
Trigger: CCAAAAGATCAAGGTGAATCAAACATCCGTTCTGGA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGCAATGGTCCTAAACTaGCTCTTACTCTGTAATGTT +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLAMVLN*LLLCNV
Trigger: AACATTACAGAGTAAGAGTCAGTTTAGGACCATTGC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGGGAGGGCTCTGTGCTaGTCACAACCCTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSGRALC*SQPCAP
Trigger: AGGTGCACAGGGTTGTGATCAGCACAGAGCCCTCCC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCTTCCTCCTTTTGCCCTaGAATGCTAAAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLFLLLP*NAKISS
Trigger: AGATGAGATTTTAGCATTGCAGGGCAAAAGGAGGAA...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGTAGAGCTGTCACTTTaGTTGGAGCCAAGACATTTT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILVELSL*LEPRHF
Trigger: AAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTAC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTTTCACTCTAGGGAATaGTGGAGAGTCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLFHSRE*WRVLQR
Trigger: TCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCATGTTTGATTCACCTTaGTCTTTTGGTGGTACTGAT +
Preference number: 4 (lower is better)
Translates to: STGSEKGGAASLGLDGLSMFDSP*SFGGTD
Trigger: ATCAGTACCACCAAAAGATCAAGGTGAATCAAACAT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCATGTTTGATTCACCTTaGTCTTTTGGTGGTACTGAT +
Preference number: 4 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLMFDSP*SFGGTD
Trigger: ATCAGTACCACCAAAAGATCAAGGTGAATCAAACAT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTAGGTACAACTTTTGGTaGAATGGTCCTAAACTGACT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILRYNFW*NGPKLT
Trigger: AGTCAGTTTAGGACCATTGCACCAAAAGTTGTACCT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTAGCAGGTGTAGTGGGTaGCTCCTTCCTGGCACAACC +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSSRCSG*LLPGTT
Trigger: GGTTGTGCCAGGAAGGAGGCACCCACTACACCTGCT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTTCCTCCTTTTGCCCTaGAATGCTAAAATCTCATCT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILFLLLP*NAKISS
Trigger: AGATGAGATTTTAGCATTGCAGGGCAAAAGGAGGAA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTGGGTGCCTCCTTCCTaGCACAACCTGCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSWVPPS*HNLPSA
Trigger: TGCAGAAGGCAGGTTGTGCCAGGAAGGAGGCACCCA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGCTTCCAAACTTGACTTaGTTTCCCTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLLPNLT*FPSPVS
Trigger: ACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAG...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCCCTTGGTCAGAAATTaGGGAAGGGCAGGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSPLVRN*GRAGKH
Trigger: GTGCTTCCCTGCCCTTCCTCAATTTCTGACCAAGGG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCTGATCACAACCCTGTaGACCTCCTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSLITTL*TSFRWP
Trigger: CGGCCATCTGAAGGAGGTGCACAGGGTTGTGATCAG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGAGCTGTCACTTTGCTTaGAGCCAAGACATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLSCHFA*SQDILK
Trigger: CTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCT...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTGCCTTCTGCATACTTaGTGGGAGGCTCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSCLLHT*WEALLG
Trigger: TCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTTCTTGCTCTTTCTATaGCATCTCCACACATACCAA +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLFLLFL*HLHTYQ
Trigger: TTGGTATGTGTGGAGATGGCATAGAAAGAGCAAGAA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCATGTGTGGACATTCTaGGCTTCTGAACTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSHVWTF*ASELAG
Trigger: CCCAGCCAGTTCAGAAGCCCAGAATGTCCACACATG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGCTGGGAGGCTCTGTTaGGAAGAAGAGTCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSAGRLC*EEESSV
Trigger: TACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTGGGCTTCTGGTCTCTaGCTTCTTGGGGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSWASGL*LLGDCF
Trigger: GAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTTTTGGTGTGTCTCCTaGCTGCAGTTCACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSFWCVS*LQFTGG
Trigger: TCCCCCAGTGAACTGCAGCCAGGAGACACACCAAAA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTTGACTTCATCTGCCTaGTTTAGAAGAAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RTVYFLCTLALALEYWILLTSSA*FRRKSS
Trigger: AGAAGATTTTCTTCTAAACCAGGCAGATGAAGTCAA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTTGGTAAGGGCAGGATaGGCAGTTTACCCTTGGGTA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSLVRAG*AVYPWV
Trigger: TACCCAAGGGTAAACTGCCCATCCTGCCCTTACCAA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCATCAAACCCTTCTGTaGTGGACAGTCTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSHQTLL*WTVSHH
Trigger: GTGATGAGAGACTGTCCATCACAGAAGGGTTTGATG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGGAGCCAAGACATTTTaGAGGCAGGGCATTATTCAG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSGAKTF*RQGIIQ
Trigger: CTGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGCAAAGCAGCTATCTTaGTGGCTATTTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSAKQLS*WLFLWL
Trigger: CAGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGATGACCAAATACTTTTaGACAAAATTCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLMTKYF*TKFTAH
Trigger: GTGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCAT...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTAGAGTCAGACTCCCTTaGTCAGAAATTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSRVRLP*SEIEEG
Trigger: CCCTTCCTCAATTTCTGACCAAGGGAGTCTGACTCT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTTGACTTCATCTGCCTaGTTTAGAAGAAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLLTSSA*FRRKSS
Trigger: AGAAGATTTTCTTCTAAACCAGGCAGATGAAGTCAA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR TCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTATCTTCTTCCAAACTTaGCTTGGTTTCCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSIFFQT*LGFPLQ
Trigger: CTGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGAT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGGCTATTTCTGTGGCTaGATCAAACCCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSGYFCG*IKPFCD
Trigger: ATCACAGAAGGGTTTGATGCAGCCACAGAAATAGCC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCTTTCACATGCACTCTaGTTAGACCCATGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSLSHAL*LDPCKA
Trigger: TGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGTAGAGCTGTCACTTTaGTTGGAGCCAAGACATTTT +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSVELSL*LEPRHF
Trigger: AAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTAC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTATAAGGCCGTCTGTTaGTGTGTGTATTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSYKAVC*CVYSCG
Trigger: ACCACATGAATACACACACCAACAGACGGCCTTATA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR GCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTATGACCAAATACTTTTaGACAAAATTCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSMTKYF*TKFTAH
Trigger: GTGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCAT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CCA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTTCTTTCTTAATCCTTaGCTACTTAGTGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSFFLNP*LLSGWY
Trigger: ATACCAACCACTAAGTAGCCAAGGATTAAGAAAGAA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp AGCAGGCAGTTAAAGCCTGTGTGGGACCAGAGAAGCTTGGCGGGGTaGTGGGAGCCAGCCATTCCCCACTGGCCACCTTCACTTCCTACC +
Preference number: 5 (lower is better)
Translates to: SRQLKPVWDQRSLAG*WEPAIPHWPPSLPT
Trigger: GGTAGGAAGTGAAGGTGGCCAGTGGGGAATGGCTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCCACACAGGCTTTAACTGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp AGGCAGTTAAAGCCTGTGTGGGACCAGAGAAGCTTGGCGGGGTGCTaGGAGCCAGCCATTCCCCACTGGCCACCTTCACTTCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: RQLKPVWDQRSLAGC*EPAIPHWPPSLPTR
Trigger: CCTGGTAGGAAGTGAAGGTGGCCAGTGGGGAATGGCTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCCACACAGGCTTTAACTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp GCTGCTGGGAGCCTGAGACAGCACAGCCGTATGAGACGCCAGGGGTaGCAAAGCAGACAGGACAAGGACAGGCTTGGGCATGATGTTACG +
Preference number: 5 (lower is better)
Translates to: AAGSLRQHSRMRRQG*QSRQDKDRLGHDVT
Trigger: CGTAACATCATGCCCAAGCCTGTCCTTGTCCTGTCTGCTTTGGCACCCCTGGCGTCTCATACGGCTGTGCTGTCTCAGGCTCCCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp ACGTCCCCTCTTGGCCAGCCACCTGCATCAGAGCATAGTTCTGGGTaGGCATGCCCAGAGGCTTGGGCATTAGAGTCAGACTCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: TSPLGQPPASEHSSG*ACPEAWALESDSLG
Trigger: ACCAAGGGAGTCTGACTCTAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACTATGCTCTGATGCAGGTGGCTGGCCAAGAGGGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGAAAACGTCCCCTCTaGGCCAGCCACCTGCATCAG +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLRKRPL*ASHLHQ
Trigger: CTGATGCAGGTGGCTGGCCAAGAGGGGACGTTTTCT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCTGCCTTCTGCATACTaGCTGGGAGGCTCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLLPSAY*LGGSVG
Trigger: CCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTGCTGGGAGGCTCTGTaGGGAAGAAGAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSCWEAL*GRRVLC
Trigger: ACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCTGCTGGGAGGCTCTGTaGGGAAGAAGAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLCWEAL*GRRVLC
Trigger: ACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCA...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 90 bp TTGGTGTGTCTCCTGGCTGCAGTTCACTGGGGGAGGGCTCTGTGCTaGTCACAACCCTGTGCACCTCCTTCAGATGGCCGAAATAGACTC +
Preference number: 5 (lower is better)
Translates to: LVCLLAAVHWGRALC*SQPCAPPSDGRNRL
Trigger: GAGTCTATTTCGGCCATCTGAAGGAGGTGCACAGGGTTGTGATCAGCACAGAGCCCTCCCCCAGTGAACTGCAGCCAGGAGACACACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp CCTCTTGGCCAGCCACCTGCATCAGAGCATAGTTCTGGGTGGGCATaGCCAGAGGCTTGGGCATTAGAGTCAGACTCCCTTGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: PLGQPPASEHSSGWA*PEAWALESDSLGQK
Trigger: TTTCTGACCAAGGGAGTCTGACTCTAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACTATGCTCTGATGCAGGTGGCTGGCCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCTCCCTTGGTCAGAAATaGAGGAAGGGCAGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLSLGQK*RKGREA
Trigger: TGCTTCCCTGCCCTTCCTCAATTTCTGACCAAGGGA...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTGGTCTCTGGCTTCTaGGGGACTGTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLVSGF*GTVSCS
Trigger: AGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 90 bp ACGCCAGGGGTGCCAAAGCAGACAGGACAAGGACAGGCTTGGGCATaGTGTTACGATACTTCCTTGAAGCAACCCTGGGCTTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: TPGVPKQTGQGQAWA*CYDTSLKQPWASGL
Trigger: GAGACCAGAAGCCCAGGGTTGCTTCAAGGAAGTATCGTAACATCATGCCCAAGCCTGTCCTTGTCCTGTCTGCTTTGGCACCCCTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGGCATGCCCAGAGGCTaGGGCATTAGAGTCAGACTC +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLGMPRG*GIRVRL
Trigger: GAGTCTGACTCTAATGCCCAAGCCTCTGGGCATGCC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGGATCAGGATAGGCTaGTGGGGAAGAGGTCAAATG +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLRIRIG*WGRGQM
Trigger: CATTTGACCTCTTCCCCACAAGCCTATCCTGATCCT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTAGGACTCAAATCTCCTaGGCCAACACCACTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILRTQIS*ANTTGQ
Trigger: CTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCCT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCATGGGCAGTTTACCCTaGGGTACTACAGAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLMGSLP*GTTESN
Trigger: GTTGCTCTCTGTAGTACCCAAGGGTAAACTGCCCAT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGGCATAGGGCTTCATTaGCTTCCTCCTCTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLGIGLH*LPPLCV
Trigger: TACACAGAGAGGAGGAAGCAAATGAAGCCCTATGCC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp TGGGGTGGTTGTCACCATGGTGAAGTTTCATATGTGCACTCAGGCTaGCGGGGCGCACATAGGTCTTGCGACAGATCCCGCAACTATAAG +
Preference number: 5 (lower is better)
Translates to: WGGCHHGEVSYVHSG*RGAHRSCDRSRNYK
Trigger: CTTATAGTTGCGGGATCTGTCGCAAGACCTATGTGCGCCCCGGCAGCCTGAGTGCACATATGAAACTTCACCATGGTGACAACCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp ATTTTGAAGGCAGGGCATTATTCAGAACATCTTGACCTAGGCTGCTaGGAGCCTGAGACAGCACAGCCGTATGAGACGCCAGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ILKAGHYSEHLDLGC*EPETAQPYETPGVP
Trigger: TGGCACCCCTGGCGTCTCATACGGCTGTGCTGTCTCAGGCTCCCAGCAGCCTAGGTCAAGATGTTCTGAATAATGCCCTGCCTTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGAGAAGGGTTTAAAGTaGGCATTTGCTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLEKGLK*AFASTG
Trigger: GCCTGTGGAAGCAAATGCCAACTTTAAACCCTTCTC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTAGGACAAGGACAGGCTaGGGCATGATGTTACGATAC +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILRTRTG*GMMLRY
Trigger: GTATCGTAACATCATGCCCAAGCCTGTCCTTGTCCT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCGGTAGAGCTGTCACTTaGCTTGGAGCCAAGACATTT +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSGRAVT*LGAKTF
Trigger: AAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACC...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCCTCTGTTCTTGTTTTTaGGTGTGTCTCCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSLCSCF*VCLLAA
Trigger: TGCAGCCAGGAGACACACCAAAAAACAAGAACAGAG...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp GAAGTTTCATATGTGCACTCAGGCTGCCGGGGCGCACATAGGTCTTaGGACAGATCCCGCAACTATAAGGCCGTCTGTTGGTGTGTGTAT +
Preference number: 5 (lower is better)
Translates to: EVSYVHSGCRGAHRS*DRSRNYKAVCWCVY
Trigger: ATACACACACCAACAGACGGCCTTATAGTTGCGGGATCTGTCGCAAGACCTATGTGCGCCCCGGCAGCCTGAGTGCACATATGAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGTAGCTGTGTTGATGTaGGTGGGAGAAGGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLVAVLM*VGEGFK
Trigger: TTTAAACCCTTCTCCCACCAACATCAACACAGCTAC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGCATCTGATTCCACTTaGCCCACCTCTGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILASDST*PTSVVF
Trigger: GAAAACTACAGAGGTGGGCAAAGTGGAATCAGATGC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCTGGAGCCAAGACATTTaGAAGGCAGGGCATTATTCA +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSWSQDI*KAGHYS
Trigger: TGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCCA...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGAGCTGTCACTTTGCTaGGAGCCAAGACATTTTGAA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLELSLC*EPRHFE
Trigger: TTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGGTAGAGCTGTCACTTaGCTTGGAGCCAAGACATTT +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILGRAVT*LGAKTF
Trigger: AAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTCTTCCAAACTTGACTaGGTTTCCCTCTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILSSKLD*VSLSSE
Trigger: CTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCACGGCCACATCTGATTaGCAATTTGACTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSTATSD*QFDFIC
Trigger: GCAGATGAAGTCAAATTGCAAATCAGATGTGGCCGT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp CTCTCTGTTCTGATGAGGGGCTGGCAGTCTTTTCACTCTAGGGAATaGTGGAGAGTCCTCCAGAGAGGCATAGGGCTTCATTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSVLMRGWQSFHSRE*WRVLQRGIGLHLLP
Trigger: AGGAAGCAAATGAAGCCCTATGCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAAAGACTGCCAGCCCCTCATCAGAACAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp TCTGTTCTGATGAGGGGCTGGCAGTCTTTTCACTCTAGGGAATGCTaGAGAGTCCTCCAGAGAGGCATAGGGCTTCATTTGCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SVLMRGWQSFHSREC*RVLQRGIGLHLLPP
Trigger: AGGAGGAAGCAAATGAAGCCCTATGCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAAAGACTGCCAGCCCCTCATCAGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTTTTTCCCACTCTGTGTaGTTCCAGAACGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILFSHSV*FQNGCL
Trigger: CAAACATCCGTTCTGGAACAACACAGAGTGGGAAAA...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTGTAGCTGTGTTGATGTaGGTGGGAGAAGGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILVAVLM*VGEGFK
Trigger: TTTAAACCCTTCTCCCACCAACATCAACACAGCTAC...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCATGCATTTCCTCCTTTaGCCCTGCAATGCTAAAATC +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSMHFLL*PCNAKI
Trigger: GATTTTAGCATTGCAGGGCAAAAGGAGGAAATGCAT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCATGCATTTCCTCCTTTaGCCCTGCAATGCTAAAATC +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLMHFLL*PCNAKI
Trigger: GATTTTAGCATTGCAGGGCAAAAGGAGGAAATGCAT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAAGGTGGTGTTTGAATaGAAAGTGGTAGTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSKVVFE*KVVVAD
Trigger: GTCTGCAACTACCACTTTCAATTCAAACACCACCTT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAGCAATCTTCTTCCAAACTaGACTTGGTTTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: STGSEKGGAASLGLDGLSNLLPN*TWFPSP
Trigger: TGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGATT...GCTGAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCAATCTTCTTCCAAACTaGACTTGGTTTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLNLLPN*TWFPSP
Trigger: TGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGATT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTACGGCCACATCTGATTaGCAATTTGACTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILTATSD*QFDFIC
Trigger: GCAGATGAAGTCAAATTGCAAATCAGATGTGGCCGT...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGGCATAGGGCTTCATTaGCTTCCTCCTCTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLGIGLH*LPPLCV
Trigger: TACACAGAGAGGAGGAAGCAAATGAAGCCCTATGCC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp TCAAGATCGCCACAGCTGTTGGTCACTAGAGGACTCAAATCTCCTTaGCCAACACCACTGGTCAGTGTAGCTGTGTTGATGTTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SRSPQLLVTRGLKSP*PTPLVSVAVLMLVG
Trigger: TCCCACCAACATCAACACAGCTACACTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCCTCTAGTGACCAACAGCTGTGGCGATCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGGGCTGAGGCAACATTaGGGAAAGCAACAAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLGLRQH*GKQQEK
Trigger: TTTCTCTTGTTGCTTTCCCAAATGTTGCCTCAGCCC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGCATCTGATTCCACTTaGCCCACCTCTGTAGTTTTC +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLASDST*PTSVVF
Trigger: GAAAACTACAGAGGTGGGCAAAGTGGAATCAGATGC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTGCAAAGCAGCTATCTaGCTGGCTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLCKAAI*LAISVA
Trigger: AGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCCATCTGATTTGCAATTaGACTTCATCTGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLHLICN*TSSAWF
Trigger: AAACCAGGCAGATGAAGTCAAATTGCAAATCAGATG...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp CGATACTTCCTTGAAGCAACCCTGGGCTTCTGGTCTCTGGCTTCTTaGGGACTGTTTCTTGCTCTTTCTATGCCATCTCCACACATACCA +
Preference number: 5 (lower is better)
Translates to: RYFLEATLGFWSLAS*GLFLALSMPSPHIP
Trigger: TGGTATGTGTGGAGATGGCATAGAAAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGAAGTATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCATTCACCTTGATCTTTaGGTGGTACTGATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLIHLDL*VVLMKN
Trigger: ATTCTTCATCAGTACCACCAAAAGATCAAGGTGAAT...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGGCATGCCCAGAGGCTaGGGCATTAGAGTCAGACTC +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSGMPRG*GIRVRL
Trigger: GAGTCTGACTCTAATGCCCAAGCCTCTGGGCATGCC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTAGAAAACGTCCCCTCTaGGCCAGCCACCTGCATCAG +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSRKRPL*ASHLHQ
Trigger: CTGATGCAGGTGGCTGGCCAAGAGGGGACGTTTTCT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGATGGCCTCGAAGCTAACTGTTCTTaGAGTTCTTCACTAGCAATA +
Preference number: 5 (lower is better)
Translates to: SSTGSEKGGAASLGLDGLEANCS*SSSLAI
Trigger: TATTGCTAGTGAAGAACTCAAAGAACAGTTAGCTTC...GAGGCCATCCAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGTGGAGCCAAGACATTTaGAAGGCAGGGCATTATTCA +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLWSQDI*KAGHYS
Trigger: TGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCCA...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CGCACAGTGTACTTCCTCTGTACACTGGCCCTGGCCCTGGAGTACTGGATCCTTCATCTGATTTGCAATTaGACTTCATCTGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RTVYFLCTLALALEYWILHLICN*TSSAWF
Trigger: AAACCAGGCAGATGAAGTCAAATTGCAAATCAGATG...AAGGATCCAGTACTCCAGGGCCAGGGCCAGTGTACAGAGGAAGTACACTGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 90 bp GCCGTCTGTTGGTGTGTGTATTCATGTGGTCTAGAAGGTGGTGTTTaGATTGAAAGTGGTAGTTGCAGACTGGACACATGTGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AVCWCVYSCGLEGGV*IESGSCRLDTCARA
Trigger: AGCCCTGGCACATGTGTCCAGTCTGCAACTACCACTTTCAATTCAAACACCACCTTCTAGACCACATGAATACACACACCAACAGACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp GTGACAGGACAGAAGGCACTTTCACATGCACTCTGCTTAGACCCATaGAAAGCAGCTATCTTGCTGGCTATTTCTGTGGCTGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: VTGQKALSHALCLDP*KAAILLAISVAASN
Trigger: GTTTGATGCAGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAGTGCCTTCTGTCCTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp CCATTTCGGAGTACAGAGCTGGGCTTAGGGGTAGAGCTGTCACTTTaGTTGGAGCCAAGACATTTTGAAGGCAGGGCATTATTCAGAACA +
Preference number: 5 (lower is better)
Translates to: PFRSTELGLGVELSL*LEPRHFEGRALFRT
Trigger: TGTTCTGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACCCCTAAGCCCAGCTCTGTACTCCGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 90 bp AGCAACCCTGGGCTTCTGGTCTCTGGCTTCTTGGGGACTGTTTCTTaGTCTTTCTATGCCATCTCCACACATACCAATAATGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: SNPGLLVSGFLGTVS*SFYAISTHTNNAFP
Trigger: AGGAAATGCATTATTGGTATGTGTGGAGATGGCATAGAAAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCAGGGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGTCAGTGTAGCTGTGTaGATGTTGGTGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSVSVAV*MLVGEG
Trigger: CCCTTCTCCCACCAACATCAACACAGCTACACTGAC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTAGGACTCAAATCTCCTaGGCCAACACCACTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSRTQIS*ANTTGQ
Trigger: CTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCCT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 90 bp GGAATAGGCAGTTTAAGGTTTTCATGTGTGGACATTCTGGGCTTCTaGACTGGCTGGGCTGAGGCAACATTTGGGAAAGCAACAAGAGAA +
Preference number: 5 (lower is better)
Translates to: GIGSLRFSCVDILGF*TGWAEATFGKATRE
Trigger: TTCTCTTGTTGCTTTCCCAAATGTTGCCTCAGCCCAGCCAGTTCAGAAGCCCAGAATGTCCACACATGAAAACCTTAAACTGCCTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGATTCACCTTGATCTTTaGGTGGTACTGATGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLIHLDL*VVLMKN
Trigger: ATTCTTCATCAGTACCACCAAAAGATCAAGGTGAAT...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp CTAAATCCTAGCAGCACAGGCAGTGAGAAAGGTGGTGCAGCATCTCTTGGGCTGGAAGCTAACTGTTCTTaGAGTTCTTCACTAGCAATA +
Preference number: 5 (lower is better)
Translates to: LNPSSTGSEKGGAASLGLEANCS*SSSLAI
Trigger: TATTGCTAGTGAAGAACTCAAAGAACAGTTAGCTTC...CAGCCCAAGAGATGCTGCACCACCTTTCTCACTGCCTGTGCTGCTAGGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTATGGGCAGTTTACCCTaGGGTACTACAGAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSMGSLP*GTTESN
Trigger: GTTGCTCTCTGTAGTACCCAAGGGTAAACTGCCCAT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTAGGACAAGGACAGGCTaGGGCATGATGTTACGATAC +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSRTRTG*GMMLRY
Trigger: GTATCGTAACATCATGCCCAAGCCTGTCCTTGTCCT...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGGGCTGAGGCAACATTaGGGAAAGCAACAAGAGAAA +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSGLRQH*GKQQEK
Trigger: TTTCTCTTGTTGCTTTCCCAAATGTTGCCTCAGCCC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTGCAAAGCAGCTATCTaGCTGGCTATTTCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSCKAAI*LAISVA
Trigger: AGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTCTTCCAAACTTGACTaGGTTTCCCTCTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSSSKLD*VSLSSE
Trigger: CTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp CTTCATCTGCCTGGTTTAGAAGAAAATCTTCTTCCAAACTTGACTTaGTTTCCCTCTCCAGTGAGTTGTCAGGTCCTTGCATACCAGGAT +
Preference number: 5 (lower is better)
Translates to: LHLPGLEENLLPNLT*FPSPVSCQVLAYQD
Trigger: ATCCTGGTATGCAAGGACCTGACAACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGATTTTCTTCTAAACCAGGCAGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTTTTTCCCACTCTGTGTaGTTCCAGAACGGATGTTTG +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSFSHSV*FQNGCL
Trigger: CAAACATCCGTTCTGGAACAACACAGAGTGGGAAAA...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTGAGCTGTCACTTTGCTaGGAGCCAAGACATTTTGAA +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSELSLC*EPRHFE
Trigger: TTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTC...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 90 bp CATGACCAAATACTTTTGCACAAAATTCACAGCACACTAGTTTCTTaGGGTGGTTGTCACCATGGTGAAGTTTCATATGTGCACTCAGGC +
Preference number: 5 (lower is better)
Translates to: HDQILLHKIHSTLVS*GGCHHGEVSYVHSG
Trigger: GCCTGAGTGCACATATGAAACTTCACCATGGTGACAACCACCCCAAGAAACTAGTGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 90 bp GATGTTAGGACCTTAGGTACAACTTTTGGTGCAATGGTCCTAAACTaGCTCTTACTCTGTAATGTTTTCCCACTCTGTGTTGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: DVRTLGTTFGAMVLN*LLLCNVFPLCVVPE
Trigger: TTCTGGAACAACACAGAGTGGGAAAACATTACAGAGTAAGAGTCAGTTTAGGACCATTGCACCAAAAGTTGTACCTAAGGTCCTAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS-3UTR CAA 90 bp AGGACACATGTACATATATTCCCTCTCTGTTGCTCTCTCTCTCTGTCACTCTCTCATGACCAAATACTTTaGCACAAAATTCACAGCACA +
Preference number: 5 (lower is better)
Translates to: RTHVHIFPLCCSLSLSLSHDQIL*HKIHST
Trigger: TGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCATG...AGAGAGTGACAGAGAGAGAGAGCAACAGAGAGGGAATATATGTACATGTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp AAGCCTGTGTGGGACCAGAGAAGCTTGGCGGGGTGCTaGGAGCCAGCCATTCCCCACTGGCCACCTTCACTT +
Preference number: 6 (lower is better)
Translates to: KPVWDQRSLAGC*EPAIPHWPPSL
Trigger: AAGTGAAGGTGGCCAGTGGGGAATGGCTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCCACACAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp TTAAAGCCTGTGTGGGACCAGAGAAGCTTGGCGGGGTaGTGGGAGCCAGCCATTCCCCACTGGCCACCTTCA +
Preference number: 6 (lower is better)
Translates to: LKPVWDQRSLAG*WEPAIPHWPPS
Trigger: TGAAGGTGGCCAGTGGGGAATGGCTGGCTCCCAGCACCCCGCCAAGCTTCTCTGGTCCCACACAGGCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp AGCAGGTGTAGTGGGTGCCTCCTTCCTGGCACAACCTaGCTTCTGCATACTTGCTGGGAGGCTCTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: SRCSGCLLPGTT*LLHTCWEALLG
Trigger: TCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGTGCCAGGAAGGAGGCACCCACTACACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp TATGTGCACTCAGGCTGCCGGGGCGCACATAGGTCTTaGGACAGATCCCGCAACTATAAGGCCGTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: YVHSGCRGAHRS*DRSRNYKAVCW
Trigger: CCAACAGACGGCCTTATAGTTGCGGGATCTGTCGCAAGACCTATGTGCGCCCCGGCAGCCTGAGTGCACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp CTTGGCCAGCCACCTGCATCAGAGCATAGTTCTGGGTaGGCATGCCCAGAGGCTTGGGCATTAGAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LGQPPASEHSSG*ACPEAWALESD
Trigger: GTCTGACTCTAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACTATGCTCTGATGCAGGTGGCTGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp CAGCCACCTGCATCAGAGCATAGTTCTGGGTGGGCATaGCCAGAGGCTTGGGCATTAGAGTCAGACTCCCTT +
Preference number: 6 (lower is better)
Translates to: QPPASEHSSGWA*PEAWALESDSL
Trigger: AAGGGAGTCTGACTCTAATGCCCAAGCCTCTGGGCATGCCCACCCAGAACTATGCTCTGATGCAGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp TGTCACCATGGTGAAGTTTCATATGTGCACTCAGGCTaGCGGGGCGCACATAGGTCTTGCGACAGATCCCGC +
Preference number: 6 (lower is better)
Translates to: CHHGEVSYVHSG*RGAHRSCDRSR
Trigger: GCGGGATCTGTCGCAAGACCTATGTGCGCCCCGGCAGCCTGAGTGCACATATGAAACTTCACCATGGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp CTTGGGGTGGTTGTCACCATGGTGAAGTTTCATATGTaGACTCAGGCTGCCGGGGCGCACATAGGTCTTGCG +
Preference number: 6 (lower is better)
Translates to: LGVVVTMVKFHM*TQAAGAHIGLA
Trigger: CGCAAGACCTATGTGCGCCCCGGCAGCCTGAGTGCACATATGAAACTTCACCATGGTGACAACCACCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 72 bp CAGCACACTAGTTTCTTGGGGTGGTTGTCACCATGGTaGAGTTTCATATGTGCACTCAGGCTGCCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: QHTSFLGWLSPW*SFICALRLPGR
Trigger: GCGCCCCGGCAGCCTGAGTGCACATATGAAACTTCACCATGGTGACAACCACCCCAAGAAACTAGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp TCAAATGACATAGCTGGGATGGGCCAGGAGGGTCACTaGAGCCACTCTTGGGAGAGCTCAGGTCCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SNDIAGMGQEGH*SHSWESSGPVS
Trigger: AGAAACAGGACCTGAGCTCTCCCAAGAGTGGCTCCAGTGACCCTCCTGGCCCATCCCAGCTATGTCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp GCAGGGCATTATTCAGAACATCTTGACCTAGGCTGCTaGGAGCCTGAGACAGCACAGCCGTATGAGACGCCA +
Preference number: 6 (lower is better)
Translates to: AGHYSEHLDLGC*EPETAQPYETP
Trigger: TGGCGTCTCATACGGCTGTGCTGTCTCAGGCTCCCAGCAGCCTAGGTCAAGATGTTCTGAATAATGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp GGCTTCATTTGCTTCCTCCTCTCTGTGTACTGCTTCTaGTGGGGAGCATCCGATCTGCTGCCTGGTAGGATC +
Preference number: 6 (lower is better)
Translates to: GFICFLLSVYCF*WGASDLLPGRI
Trigger: GATCCTACCAGGCAGCAGATCGGATGCTCCCCACCAGAAGCAGTACACAGAGAGGAGGAAGCAAATGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp GTGTGGACATTCTGGGCTTCTGAACTGGCTGGGCTGAGGCAACATTaGGGAAAGCAACAAGAGAAAACGTCCCCTCTTGGCCAGCCACCT +
Preference number: 6 (lower is better)
Translates to: VWTFWASELAGLRQH*GKQQEKTSPLGQPP
Trigger: AGGTGGCTGGCCAAGAGGGGACGTTTTCTCTTGTTGCTTTCCCAAATGTTGCCTCAGCCCAGCCAGTTCAGAAGCCCAGAATGTCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp CTGATGAGGGGCTGGCAGTCTTTTCACTCTAGGGAATaGTGGAGAGTCCTCCAGAGAGGCATAGGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LMRGWQSFHSRE*WRVLQRGIGLH
Trigger: ATGAAGCCCTATGCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAAAGACTGCCAGCCCCTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp ATGCCCAGAGGCTTGGGCATTAGAGTCAGACTCCCTTaGTCAGAAATTGAGGAAGGGCAGGGAAGCACTCTG +
Preference number: 6 (lower is better)
Translates to: MPRGLGIRVRLP*SEIEEGQGSTL
Trigger: CAGAGTGCTTCCCTGCCCTTCCTCAATTTCTGACCAAGGGAGTCTGACTCTAATGCCCAAGCCTCTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp CTCCTTCCTGGCACAACCTGCCTTCTGCATACTTGCTaGGAGGCTCTGTTGGGAAGAAGAGTCCTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: LLPGTTCLLHTC*EALLGRRVLCS
Trigger: ACTACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGTGCCAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp TCCTACCAGGGCTTCCTCTCTGTTCTGATGAGGGGCTaGCAGTCTTTTCACTCTAGGGAATGCTGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: SYQGFLSVLMRG*QSFHSRECWRV
Trigger: GACTCTCCAGCATTCCCTAGAGTGAAAAGACTGCCAGCCCCTCATCAGAACAGAGAGGAAGCCCTGGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp CTTCCTGGCACAACCTGCCTTCTGCATACTTGCTGGGAGGCTCTGTaGGGAAGAAGAGTCCTCTGTAGTGTACACTGGCATGGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LPGTTCLLHTCWEAL*GRRVLCSVHWHGRK
Trigger: CTTTCTGCCATGCCAGTGTACACTACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGTGCCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp CAACCTGCCTTCTGCATACTTGCTGGGAGGCTCTGTTaGGAAGAAGAGTCCTCTGTAGTGTACACTGGCATG +
Preference number: 6 (lower is better)
Translates to: QPAFCILAGRLC*EEESSVVYTGM
Trigger: CATGCCAGTGTACACTACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp ATGAGGGGCTGGCAGTCTTTTCACTCTAGGGAATGCTaGAGAGTCCTCCAGAGAGGCATAGGGCTTCATTTG +
Preference number: 6 (lower is better)
Translates to: MRGWQSFHSREC*RVLQRGIGLHL
Trigger: CAAATGAAGCCCTATGCCTCTCTGGAGGACTCTCCAGCATTCCCTAGAGTGAAAAGACTGCCAGCCCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp GTAGTGTACACTGGCATGGCAGAAAGCTCAAGATCGCCACAGCTGTaGGTCACTAGAGGACTCAAATCTCCTTGGCCAACACCACTGGTC +
Preference number: 6 (lower is better)
Translates to: VVYTGMAESSRSPQL*VTRGLKSPWPTPLV
Trigger: GACCAGTGGTGTTGGCCAAGGAGATTTGAGTCCTCTAGTGACCAACAGCTGTGGCGATCTTGAGCTTTCTGCCATGCCAGTGTACACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 72 bp AAGGACAGGCTTGGGCATGATGTTACGATACTTCCTTaGAGCAACCCTGGGCTTCTGGTCTCTGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: KDRLGHDVTILP*SNPGLLVSGFL
Trigger: CAAGAAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGAAGTATCGTAACATCATGCCCAAGCCTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp CCACAGCTGTTGGTCACTAGAGGACTCAAATCTCCTTaGCCAACACCACTGGTCAGTGTAGCTGTGTTGATG +
Preference number: 6 (lower is better)
Translates to: PQLLVTRGLKSP*PTPLVSVAVLM
Trigger: CATCAACACAGCTACACTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCCTCTAGTGACCAACAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp TCACTCTTGGTAAGGGCAGGATGGGCAGTTTACCCTTaGGTACTACAGAGAGCAACTGAACTGCACTGCTCA +
Preference number: 6 (lower is better)
Translates to: SLLVRAGWAVYP*VLQRATELHCS
Trigger: TGAGCAGTGCAGTTCAGTTGCTCTCTGTAGTACCCAAGGGTAAACTGCCCATCCTGCCCTTACCAAGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp ACAACCTGCCTTCTGCATACTTGCTGGGAGGCTCTGTaGGGAAGAAGAGTCCTCTGTAGTGTACACTGGCAT +
Preference number: 6 (lower is better)
Translates to: TTCLLHTCWEAL*GRRVLCSVHWH
Trigger: ATGCCAGTGTACACTACAGAGGACTCTTCTTCCCAACAGAGCCTCCCAGCAAGTATGCAGAAGGCAGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 72 bp ATGGGCAGTTTACCCTTGGGTACTACAGAGAGCAACTaGACTGCACTGCTCAAGACAGTCTGTGCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: MGSLPLGTTESN*TALLKTVCAEA
Trigger: AGCTTCTGCACAGACTGTCTTGAGCAGTGCAGTTCAGTTGCTCTCTGTAGTACCCAAGGGTAAACTGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp TTTGAGTTCTTCACTAGCAATAGCAGGTGTAGTGGGTaGCTCCTTCCTGGCACAACCTGCCTTCTGCATACT +
Preference number: 6 (lower is better)
Translates to: FEFFTSNSRCSG*LLPGTTCLLHT
Trigger: AGTATGCAGAAGGCAGGTTGTGCCAGGAAGGAGGCACCCACTACACCTGCTATTGCTAGTGAAGAACTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp TTGGTGACAGGACAGAAGGCACTTTCACATGCACTCTaGTTAGACCCATGCAAAGCAGCTATCTTGCTGGCT +
Preference number: 6 (lower is better)
Translates to: LVTGQKALSHAL*LDPCKAAILLA
Trigger: AGCCAGCAAGATAGCTGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAGTGCCTTCTGTCCTGTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp AGTACAGAGCTGGGCTTAGGGGTAGAGCTGTCACTTTaGTTGGAGCCAAGACATTTTGAAGGCAGGGCATTA +
Preference number: 6 (lower is better)
Translates to: STELGLGVELSL*LEPRHFEGRAL
Trigger: TAATGCCCTGCCTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACCCCTAAGCCCAGCTCTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp GATACTTCCTTGAAGCAACCCTGGGCTTCTGGTCTCTaGCTTCTTGGGGACTGTTTCTTGCTCTTTCTATGC +
Preference number: 6 (lower is better)
Translates to: DTSLKQPWASGL*LLGDCFLLFLC
Trigger: GCATAGAAAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGAAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp ACAGAGCTGGGCTTAGGGGTAGAGCTGTCACTTTGCTaGGAGCCAAGACATTTTGAAGGCAGGGCATTATTC +
Preference number: 6 (lower is better)
Translates to: TELGLGVELSLC*EPRHFEGRALF
Trigger: GAATAATGCCCTGCCTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACCCCTAAGCCCAGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp GGACTCAAATCTCCTTGGCCAACACCACTGGTCAGTGTAGCTGTGTaGATGTTGGTGGGAGAAGGGTTTAAAGTTGGCATTTGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: GLKSPWPTPLVSVAV*MLVGEGFKVGICFH
Trigger: GTGGAAGCAAATGCCAACTTTAAACCCTTCTCCCACCAACATCAACACAGCTACACTGACCAGTGGTGTTGGCCAAGGAGATTTGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp GCACTTTCACATGCACTCTGCTTAGACCCATGCAAAGCAGCTATCTaGCTGGCTATTTCTGTGGCTGCATCAAACCCTTCTGTGATGGAC +
Preference number: 6 (lower is better)
Translates to: ALSHALCLDPCKAAI*LAISVAASNPSVMD
Trigger: GTCCATCACAGAAGGGTTTGATGCAGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp CAGAAGGCACTTTCACATGCACTCTGCTTAGACCCATaGAAAGCAGCTATCTTGCTGGCTATTTCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: QKALSHALCLDP*KAAILLAISVA
Trigger: AGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCATGGGTCTAAGCAGAGTGCATGTGAAAGTGCCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp CCTCTTCTCTTTATTCCACTGCTGGGTTTTGCCTTGTaGCTGAGATCCAATTTGGTGACAGGACAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: PLLFIPLLGFAL*LRSNLVTGQKA
Trigger: TGCCTTCTGTCCTGTCACCAAATTGGATCTCAGCCACAAGGCAAAACCCAGCAGTGGAATAAAGAGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp ATGTTACGATACTTCCTTGAAGCAACCCTGGGCTTCTaGTCTCTGGCTTCTTGGGGACTGTTTCTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: MLRYFLEATLGF*SLASWGLFLAL
Trigger: AAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCCAGGGTTGCTTCAAGGAAGTATCGTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp TCTTGCGACAGATCCCGCAACTATAAGGCCGTCTGTTaGTGTGTGTATTCATGTGGTCTAGAAGGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: SCDRSRNYKAVC*CVYSCGLEGGV
Trigger: AACACCACCTTCTAGACCACATGAATACACACACCAACAGACGGCCTTATAGTTGCGGGATCTGTCGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp TGGCCAACACCACTGGTCAGTGTAGCTGTGTTGATGTaGGTGGGAGAAGGGTTTAAAGTTGGCATTTGCTTC +
Preference number: 6 (lower is better)
Translates to: WPTPLVSVAVLM*VGEGFKVGICF
Trigger: GAAGCAAATGCCAACTTTAAACCCTTCTCCCACCAACATCAACACAGCTACACTGACCAGTGGTGTTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp TCTCCTTGGCCAACACCACTGGTCAGTGTAGCTGTGTaGATGTTGGTGGGAGAAGGGTTTAAAGTTGGCATT +
Preference number: 6 (lower is better)
Translates to: SPWPTPLVSVAV*MLVGEGFKVGI
Trigger: AATGCCAACTTTAAACCCTTCTCCCACCAACATCAACACAGCTACACTGACCAGTGGTGTTGGCCAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp CATGCACTCTGCTTAGACCCATGCAAAGCAGCTATCTaGCTGGCTATTTCTGTGGCTGCATCAAACCCTTCT +
Preference number: 6 (lower is better)
Translates to: HALCLDPCKAAI*LAISVAASNPS
Trigger: AGAAGGGTTTGATGCAGCCACAGAAATAGCCAGCAAGATAGCTGCTTTGCATGGGTCTAAGCAGAGTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp TTTCGGAGTACAGAGCTGGGCTTAGGGGTAGAGCTGTCACTTTGCTaGGAGCCAAGACATTTTGAAGGCAGGGCATTATTCAGAACATCT +
Preference number: 6 (lower is better)
Translates to: FRSTELGLGVELSLC*EPRHFEGRALFRTS
Trigger: AGATGTTCTGAATAATGCCCTGCCTTCAAAATGTCTTGGCTCCAAGCAAAGTGACAGCTCTACCCCTAAGCCCAGCTCTGTACTCCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS TCA 72 bp AGTTTAAGGTTTTCATGTGTGGACATTCTGGGCTTCTaGACTGGCTGGGCTGAGGCAACATTTGGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: SLRFSCVDILGF*TGWAEATFGKA
Trigger: TGCTTTCCCAAATGTTGCCTCAGCCCAGCCAGTTCAGAAGCCCAGAATGTCCACACATGAAAACCTTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS GCA 72 bp GGGCTTCTGGTCTCTGGCTTCTTGGGGACTGTTTCTTaGTCTTTCTATGCCATCTCCACACATACCAATAAT +
Preference number: 6 (lower is better)
Translates to: GLLVSGFLGTVS*SFYAISTHTNN
Trigger: ATTATTGGTATGTGTGGAGATGGCATAGAAAGAGCAAGAAACAGTCCCCAAGAAGCCAGAGACCAGAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp CTTCCTCTTCTCTTTATTCCACTGCTGGGTTTTGCCTaGTGGCTGAGATCCAATTTGGTGACAGGACAGAAG +
Preference number: 6 (lower is better)
Translates to: LPLLFIPLLGFA*WLRSNLVTGQK
Trigger: CTTCTGTCCTGTCACCAAATTGGATCTCAGCCACAAGGCAAAACCCAGCAGTGGAATAAAGAGAAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp TCTTCCAAACTTGACTTGGTTTCCCTCTCCAGTGAGTaGTCAGGTCCTTGCATACCAGGATCTCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSKLDLVSLSSE*SGPCIPGSLFL
Trigger: CAAGAACAGAGATCCTGGTATGCAAGGACCTGACAACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp CCTCCTTCAGATGGCCGAAATAGACTCGGACATGACCAAATACTTTaGCACAAAATTCACAGCACACTAGTTTCTTGGGGTGGTTGTCAC +
Preference number: 6 (lower is better)
Translates to: PPSDGRNRLGHDQIL*HKIHSTLVSWGGCH
Trigger: GTGACAACCACCCCAAGAAACTAGTGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCATGTCCGAGTCTATTTCGGCCATCTGAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp CTGCTCAAGACAGTCTGTGCAGAAGCTAACTGTTCTTaGAGTTCTTCACTAGCAATAGCAGGTGTAGTGGGT +
Preference number: 6 (lower is better)
Translates to: LLKTVCAEANCS*SSSLAIAGVVG
Trigger: ACCCACTACACCTGCTATTGCTAGTGAAGAACTCAAAGAACAGTTAGCTTCTGCACAGACTGTCTTGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp GCCTGGTTTAGAAGAAAATCTTCTTCCAAACTTGACTaGGTTTCCCTCTCCAGTGAGTTGTCAGGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: AWFRRKSSSKLD*VSLSSELSGPC
Trigger: GCAAGGACCTGACAACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGATTTTCTTCTAAACCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 90 bp ACTTCATCTGCCTGGTTTAGAAGAAAATCTTCTTCCAAACTTGACTaGGTTTCCCTCTCCAGTGAGTTGTCAGGTCCTTGCATACCAGGA +
Preference number: 6 (lower is better)
Translates to: TSSAWFRRKSSSKLD*VSLSSELSGPCIPG
Trigger: TCCTGGTATGCAAGGACCTGACAACTCACTGGAGAGGGAAACCAAGTCAAGTTTGGAAGAAGATTTTCTTCTAAACCAGGCAGATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp AAGGTGGTGTTTGAATTGAAAGTGGTAGTTGCAGACTaGACACATGTGCCAGGGCTTTTTAATGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: KVVFELKVVVAD*THVPGLFNARE
Trigger: TTCTCTGGCATTAAAAAGCCCTGGCACATGTGTCCAGTCTGCAACTACCACTTTCAATTCAAACACCACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp AAAGACAATTCTGCATTATCAGCATCTGATTCCACTTaGCCCACCTCTGTAGTTTTCACTCTTGGTAAGGGC +
Preference number: 6 (lower is better)
Translates to: KDNSALSASDST*PTSVVFTLGKG
Trigger: GCCCTTACCAAGAGTGAAAACTACAGAGGTGGGCAAAGTGGAATCAGATGCTGATAATGCAGAATTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp CCATCTCCACACATACCAATAATGCATTTCCTCCTTTaGCCCTGCAATGCTAAAATCTCATCTGGCACTTTC +
Preference number: 6 (lower is better)
Translates to: PSPHIPIMHFLL*PCNAKISSGTF
Trigger: GAAAGTGCCAGATGAGATTTTAGCATTGCAGGGCAAAAGGAGGAAATGCATTATTGGTATGTGTGGAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp GATGGCCGAAATAGACTCGGACATGACCAAATACTTTaGCACAAAATTCACAGCACACTAGTTTCTTGGGGT +
Preference number: 6 (lower is better)
Translates to: DGRNRLGHDQIL*HKIHSTLVSWG
Trigger: ACCCCAAGAAACTAGTGTGCTGTGAATTTTGTGCAAAAGTATTTGGTCATGTCCGAGTCTATTTCGGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CCA 72 bp ATACTTTTGCACAAAATTCACAGCACACTAGTTTCTTaGGGTGGTTGTCACCATGGTGAAGTTTCATATGTG +
Preference number: 6 (lower is better)
Translates to: ILLHKIHSTLVS*GGCHHGEVSYV
Trigger: CACATATGAAACTTCACCATGGTGACAACCACCCCAAGAAACTAGTGTGCTGTGAATTTTGTGCAAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2
CDS CAA 72 bp ACTGACTCTTACTCTGTAATGTTTTCCCACTCTGTGTaGTTCCAGAACGGATGTTTGATTCACCTTGATCTT +
Preference number: 6 (lower is better)
Translates to: TDSYSVMFSHSV*FQNGCLIHLDL
Trigger: AAGATCAAGGTGAATCAAACATCCGTTCTGGAACAACACAGAGTGGGAAAACATTACAGAGTAAGAGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063989.7
ENSMUST00000234241.2