Pregenerated sensors for ZFP429 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078994Ensembl transcript IDs: ENSMUST00000109732.3, ENSMUST00000181071.8, ENSMUST00000224684.2, ENSMUST00000224825.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGGCTTCCAACTCTCCTGCCACTGGAAACTCTTTGGCTAGCCCCCACCCCCTCAACTGCCAACTCTCCATaGTTCAGTTTCTCTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RLPTLLPLETLWLAPTPSTANSP*FSFSQP Trigger: AGGCTGAGAGAAACTGAAGCATGGAGAGTTGGCAGT...TGAGGGGGTGGGGGCTAGCCAAAGAGTTTCCAGTGGCAGGAGAGTTGGAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCATGAGGAAAGACATTTaGCACACTCTTCACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: PPHPHRMTVHSVVSHDNIMRKDI*HTLHTC Trigger: ACAAGTGTGAAGAGTGTGGCAAATGTCTTTCCTCAT...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCATAGAAAGTGTTTTATaGGAACTAAGGGCCTTACCA | + |
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Preference number: 2 (lower is better) Translates to: PPHPHRMTVHSVVSHDNIIESVL*ELRALP Trigger: TGGTAAGGCCCTTAGTTCTCATAAAACACTTTCTAT...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAACAGGGGCTTCCAACTCTCCTaGCACTGGAAACTCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: MLQFLSACQLSVKGWINRGFQLS*HWKLFG Trigger: GCCAAAGAGTTTCCAGTGGCAGGAGAGTTGGAAGCC...CCTGTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCATGAGGAATAGCATTTaGCACAGTCTTTACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: PPHPHRMTVHSVVSHDNIMRNSI*HSLYTC Trigger: ACAAGTGTAAAGACTGTGGCAAATGCTATTCCTCAT...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTCTCTCTGTCAAGGGCTaGATTAACAGGCTTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: ANSPCFSFSQPANSLSRALSVKG*INRLPT Trigger: AGTTGGAAGCCTGTTAATCCAGCCCTTGACAGAGAG...AGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCGTCTTCAGAGTGAATTaGTTGATGTCTTTTAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PPHPHRMTVHSVVSHDNIVFRVN*LMSFKA Trigger: TGCCTTAAAAGACATCAACCAATTCACTCTGAAGAC...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGAGGGGGAAATCTTTTaGCACATTCTTCATACATGT | + |
|
Preference number: 2 (lower is better) Translates to: ANSPCFSFSQPANSLSRAEGEIF*HILHTC Trigger: ACATGTATGAAGAATGTGTCAAAAGATTTCCCCCTC...AGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTTTAGTTGAGGTCTTTTaGGGGCTGAAGAAGTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: ANSPCFSFSQPANSLSRALVEVF*GLKKYK Trigger: TTTATACTTCTTCAGCCCTCAAAAGACCTCAACTAA...AGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTATGTTTCCTAAGGGATaGGCGATAACAAAAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSMLQFLSACQLSVKGWIMFPKG*AITKGF Trigger: AAAGCCTTTTGTTATCGCTCATCCCTTAGGAAACAT...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTTTCTACACACTTGTGTaGATTGTCTTCAGAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LSMLQFLSACQLSVKGWIFYTLV*IVFRVN Trigger: ATTCACTCTGAAGACAATCCACACAAGTGTGTAGAA...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTACAAAGCATGAGGATGAGGAAAAGCCCCTAGGACACTTGTCACATTTGCTCTCTGTCAAGGGCTaGATTAACAGGCTTCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: CCTKHEDEEKPLGHLSHLLSVKG*INRLPT Trigger: AGTTGGAAGCCTGTTAATCCAGCCCTTGACAGAGAG...CAAATGTGACAAGTGTCCTAGGGGCTTTTCCTCATCCTCATGCTTTGTACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTATGAGGAAAAACATTTaGCACACTCTTCACACTTAT | + |
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Preference number: 2 (lower is better) Translates to: LSMLQFLSACQLSVKGWIMRKNI*HTLHTY Trigger: ATAAGTGTGAAGAGTGTGGCAAATGTTTTTCCTCAT...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATTTCTACACACTTGTGTaGATTGTCTTCAGAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: FQNQLIMIGDLCRISLQDFYTLV*IVFRVN Trigger: ATTCACTCTGAAGACAATCCACACAAGTGTGTAGAA...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTGCCACTGGAAACTCTTaGGCTAGCCCCCACCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LSMLQFLSACQLSVKGWIATGNS*ASPHPL Trigger: GAGGGGGTGGGGGCTAGCCAAAGAGTTTCCAGTGGC...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAGCCACTGGAAACTCTTaGGCTAGCCCCCACCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPCFSFSQPANSLSRAGLATGNS*ASPHPL Trigger: GAGGGGGTGGGGGCTAGCCAAAGAGTTTCCAGTGGC...TAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCTCCAGTATGAGTTGTTaGATGCTCCTGAAGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPHPHRMTVHSVVSHDNISSMSC*MLLKTS Trigger: GGAAGTCTTCAGGAGCATCAAACAACTCATACTGGA...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR CCA 72 bp | CAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTaGATTAACAGGCTTCCAACTCTCCTGCCACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: QFLSACQLSVKG*INRLPTLLPLE Trigger: TTCCAGTGGCAGGAGAGTTGGAAGCCTGTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCACATTAACAAAGGCTTaGACACATTCTACACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPHPHRMTVHSVVSHDNITLTKA*THSTHL Trigger: CAAGTGTGTAGAATGTGTCAAAGCCTTTGTTAATGT...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCCTCACCCCCACCGCATGACTGTCCACTCTGTGGTCAGCCATGACAACATCTCTACAATGAAGTCTTaGATGTTGCTTAAGGAACGA | + |
|
Preference number: 3 (lower is better) Translates to: PPHPHRMTVHSVVSHDNISTMKS*MLLKER Trigger: TCGTTCCTTAAGCAACATCAAAGACTTCATTGTAGA...GATGTTGTCATGGCTGACCACAGAGTGGACAGTCATGCGGTGGGGGTGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGACACTTGTCACATTaGTGTGGATTTCTCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ANSPCFSFSQPANSLSRAGHLSH*CGFLSG Trigger: ACCAGAGAGAAATCCACACAAATGTGACAAGTGTCC...AGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR GCA 72 bp | AACTGCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTaGCAACTCTCTGTCAAGGGCTGGATTAACAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: NCQLSMLQFLSA*QLSVKGWINRL Trigger: AAGCCTGTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTATGAAGTCTTTGATGTaGCTTAAGGAACGAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSMLQFLSACQLSVKGWIMKSLM*LKERGK Trigger: TTTCCCTCGTTCCTTAAGCAACATCAAAGACTTCAT...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAACAGGTGTCTTCAGAGTGAATaGTTTGATGTTGTACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: MLQFLSACQLSVKGWINRCLQSE*FDVVQS Trigger: GCTTTGTACAACATCAAACAATTCACTCTGAAGACA...CCTGTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAACATTAACAAAGGCTTaGACACATTCTACACACTTG | + |
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Preference number: 3 (lower is better) Translates to: SPCFSFSQPANSLSRAGLTLTKA*THSTHL Trigger: CAAGTGTGTAGAATGTGTCAAAGCCTTTGTTAATGT...TAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTACAAAGCATGAGGATGAGGAAAAGCCCCTAGGACACTTGTCACATTTGGATGAGGAAAAACATTaGCCACACTCTTCACACTTA | + |
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Preference number: 3 (lower is better) Translates to: CCTKHEDEEKPLGHLSHLDEEKH*PHSSHL Trigger: TAAGTGTGAAGAGTGTGGCAAATGTTTTTCCTCATC...CAAATGTGACAAGTGTCCTAGGGGCTTTTCCTCATCCTCATGCTTTGTACAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATACACATTCTACACACTaGTGTGGATTGTCTTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FQNQLIMIGDLCRISLQDTHSTH*CGLSSE Trigger: CTCTGAAGACAATCCACACAAGTGTGTAGAATGTGT...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATTGTCTTCAGAGTGAATaGTTTGATGTTGTACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: FQNQLIMIGDLCRISLQDCLQSE*FDVVQS Trigger: GCTTTGTACAACATCAAACAATTCACTCTGAAGACA...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTGGTCTCTCTCCCGTATaGACTGCCTTGTGTATCCTA | + |
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Preference number: 4 (lower is better) Translates to: LSMLQFLSACQLSVKGWIGLSPV*TALCIL Trigger: TAGGATACACAAGGCAGTTCATACGGGAGAGAGACC...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR TCA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATAAGAGATCAGGACAGTaGGGCCCCCAGCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FQNQLIMIGDLCRISLQDKRSGQ*GPQLLQ Trigger: CTGGAGGAGCTGGGGGCCTCACTGTCCTGATCTCTT...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| CDS-3UTR TCA 90 bp | GAGGTACAGTGTCAGGATAACCTGGCCTGGCCTAAGTCACCTTATTCCCCAGTTTGGACTCATTTTTCTTaGGGCAACCAAATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EVQCQDNLAWPKSPYSPVWTHFS*GNQILH Trigger: GTGGAGAATTTGGTTGCCTCAAGAAAAATGAGTCCA...AACTGGGGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTGACACTGTACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR CCA 90 bp | AACCTGGCCTGGCCTAAGTCACCTTATTCCCCAGTTCTATTAGTTCTTTTCGAAATTGGGTGTTATTCCTaGGTACACAGTGGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLAWPKSPYSPVLLVLFEIGCYS*VHSGRS Trigger: GGAGCGGCCACTGTGTACCCAGGAATAACACCCAAT...TTCGAAAAGAACTAATAGAACTGGGGAATAAGGTGACTTAGGCCAGGCCAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR TCA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTGAGGGGGAAATCTTTTaGCACATTCTTCATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMLQFLSACQLSVKGWIEGEIF*HILHTC Trigger: ACATGTATGAAGAATGTGTCAAAAGATTTCCCCCTC...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR TCA 90 bp | AACTGCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGTTTAAGGCAGGAAGATaGGGAATAGCATTTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: NCQLSMLQFLSACQLSVKFKAGR*GIAFAT Trigger: TGTGGCAAATGCTATTCCTCATCTTCCTGCCTTAAA...CTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR TCA 90 bp | TCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAAAGACTTCCAGAGCATaGAAACCTTTTGTCACATTT | + |
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Preference number: 4 (lower is better) Translates to: SPCFSFSQPANSLSRAGLKTSRA*KPFVTF Trigger: AAATGTGACAAAAGGTTTTCATGCTCTGGAAGTCTT...TAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR CCA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATATTGGGTGTTATTCCTaGGTACACAGTGGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FQNQLIMIGDLCRISLQDIGCYS*VHSGRS Trigger: GGAGCGGCCACTGTGTACCCAGGAATAACACCCAAT...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR CCA 90 bp | AACTGCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGTCTTCAGAGTGAATTaGTTGATGTCTTTTAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: NCQLSMLQFLSACQLSVKVFRVN*LMSFKA Trigger: TGCCTTAAAAGACATCAACCAATTCACTCTGAAGAC...CTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR GCA 90 bp | TCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAACATGAGGAAAAACATTTaGCACACTCTTCACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: SMLQFLSACQLSVKGWINMRKNI*HTLHTY Trigger: ATAAGTGTGAAGAGTGTGGCAAATGTTTTTCCTCAT...GTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR GCA 90 bp | GATGAACTGTCATGTGTCGATCAGGCTATAACATTAACAAAGGCTTTGACACATATGAGGAAAGACATTTaGCACACTCTTCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: DELSCVDQAITLTKALTHMRKDI*HTLHTC Trigger: ACAAGTGTGAAGAGTGTGGCAAATGTCTTTCCTCAT...ATGTGTCAAAGCCTTTGTTAATGTTATAGCCTGATCGACACATGACAGTTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS CCA 90 bp | GTGAGGCCCCCAGCTCCTCCAGGGTGTATTTATGTTCAAGTTTACTaGGTACACAGTGGCCGCTCCTTGTCTCTTCATATCCCAAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VRPPAPPGCIYVQVY*VHSGRSLSLHIPRP Trigger: GGGCCTTGGGATATGAAGAGACAAGGAGCGGCCACTGTGTACCCAGTAAACTTGAACATAAATACACCCTGGAGGAGCTGGGGGCCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTCACAGTGGCCGCTCCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: LSMLQFLSACQLSVKGWIHSGRS*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGGAGCGGCCACTGTG...AATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| CDS-3UTR CAA 90 bp | GCTATGAGGTACAGTGTCAGGATAACCTGGCCTGGCCTAAGTCACCTTATTCCCGCAGGAACTGGGCCCTaGGACTCATTTTTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AMRYSVRITWPGLSHLIPAGTGP*DSFFLR Trigger: CCTCAAGAAAAATGAGTCCAAGGGCCCAGTTCCTGC...GGGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTGACACTGTACCTCATAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR CAA 90 bp | CAGGATAACCTGGCCTGGCCTAAGTCACCTTATTCCCCAGTTCTATTAGTTCTTCACAGTGGCCGCTCCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: QDNLAWPKSPYSPVLLVLHSGRS*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGGAGCGGCCACTGTG...AAGAACTAATAGAACTGGGGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTCCAACTCTCCTGCCACTGGAAACTCTTTGGCTAGCCCCCACCCCCTCATCTACAATGAAGTCTTaGATGTTGCTTAAGGAACGA | + |
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Preference number: 5 (lower is better) Translates to: RLPTLLPLETLWLAPTPSSTMKS*MLLKER Trigger: TCGTTCCTTAAGCAACATCAAAGACTTCATTGTAGA...TGAGGGGGTGGGGGCTAGCCAAAGAGTTTCCAGTGGCAGGAGAGTTGGAAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR CAA 90 bp | GCCAACTCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGATGAGGAAAAACATTaGCCACACTCTTCACACTTA | + |
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Preference number: 5 (lower is better) Translates to: ANSPCFSFSQPANSLSRADEEKH*PHSSHL Trigger: TAAGTGTGAAGAGTGTGGCAAATGTTTTTCCTCATC...AGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGAGTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS CCA 90 bp | ATTAGTCAGTTTGCTGTAATTGTTAGGATCATTGGGTGTTATTCCTaGGTACACAGTGGCCGCTCCTTGTCTCTTCATATCCCAAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ISQFAVIVRIIGCYS*VHSGRSLSLHIPRP Trigger: GGGCCTTGGGATATGAAGAGACAAGGAGCGGCCACTGTGTACCCAGGAATAACACCCAATGATCCTAACAATTACAGCAAACTGACTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109732.3 ENSMUST00000224684.2 ENSMUST00000224825.2 |
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| CDS-3UTR CAA 90 bp | TCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAGGAGGGGGAAATCTTTaGACACATTCTTCATACATG | + |
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Preference number: 5 (lower is better) Translates to: SPCFSFSQPANSLSRAGLGGGNL*THSSYM Trigger: CATGTATGAAGAATGTGTCAAAAGATTTCCCCCTCC...TAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR CAA 90 bp | GGCTATGAGGTACAGTGTCAGGATAACCTGGCCTGGCCTAAGTCACCTTATTCCTTGGACTCATTTTTCTaGAGGCAACCAAATTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GYEVQCQDNLAWPKSPYSLDSFF*RQPNSP Trigger: TGGAGAATTTGGTTGCCTCAAGAAAAATGAGTCCAA...GGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTGACACTGTACCTCATAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR CAA 90 bp | TCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAACGACAACATTTCCTTCTaGTCAGAGACAACTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: SMLQFLSACQLSVKGWINDNISF*SETTGI Trigger: TATTCCAGTTGTCTCTGACAAGAAGGAAATGTTGTC...GTTAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTGTCAGGATAACCTGGCCTGGCCTAAGTCACCTTATTCCCCAGTTCTAGACAACATTTCCTTCTaGTCAGAGACAACTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: VQCQDNLAWPKSPYSPVLDNISF*SETTGI Trigger: TATTCCAGTTGTCTCTGACAAGAAGGAAATGTTGTC...TAGAACTGGGGAATAAGGTGACTTAGGCCAGGCCAGGTTATCCTGACACTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224684.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATCACAGTGGCCGCTCCTaGTCTCTTCATATCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: FQNQLIMIGDLCRISLQDHSGRS*SLHIPR Trigger: CCTTGGGATATGAAGAGACAAGGAGCGGCCACTGTG...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109732.3 ENSMUST00000181071.8 |
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| CDS-3UTR CAA 90 bp | TCTCCATGCTTCAGTTTCTCTCAGCCTGCCAACTCTCTGTCAAGGGCTGGATTAATGAAGTCTTTGATGTaGCTTAAGGAACGAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SPCFSFSQPANSLSRAGLMKSLM*LKERGK Trigger: TTTCCCTCGTTCCTTAAGCAACATCAAAGACTTCAT...TAATCCAGCCCTTGACAGAGAGTTGGCAGGCTGAGAGAAACTGAAGCATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS-3UTR CAA 90 bp | TTTCAGAACCAATTGATAATGATAGGAGACCTCTGTAGGATTTCTCTCCAGGATTCCAGTATGAGTTGTTaGATGCTCCTGAAGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: FQNQLIMIGDLCRISLQDSSMSC*MLLKTS Trigger: GGAAGTCTTCAGGAGCATCAAACAACTCATACTGGA...ATCCTGGAGAGAAATCCTACAGAGGTCTCCTATCATTATCAATTGGTTCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109732.3 |
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| CDS CCA 72 bp | CCAGCTCCTCCAGGGTGTATTTATGTTCAAGTTTACTaGGTACACAGTGGCCGCTCCTTGTCTCTTCATATC | + |
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Preference number: 6 (lower is better) Translates to: PAPPGCIYVQVY*VHSGRSLSLHI Trigger: GATATGAAGAGACAAGGAGCGGCCACTGTGTACCCAGTAAACTTGAACATAAATACACCCTGGAGGAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181071.8 |
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| CDS CCA 72 bp | TTTGCTGTAATTGTTAGGATCATTGGGTGTTATTCCTaGGTACACAGTGGCCGCTCCTTGTCTCTTCATATC | + |
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Preference number: 6 (lower is better) Translates to: FAVIVRIIGCYS*VHSGRSLSLHI Trigger: GATATGAAGAGACAAGGAGCGGCCACTGTGTACCCAGGAATAACACCCAATGATCCTAACAATTACAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109732.3 ENSMUST00000224684.2 ENSMUST00000224825.2 |
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