Pregenerated sensors for ZFP428 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064264Ensembl transcript IDs: ENSMUST00000071361.13, ENSMUST00000176880.2, ENSMUST00000177205.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTTATTCAGCCCTTCACATTATCTACAGCTAAGACAACACAGATaGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLFSPSHYLQLRQHR*AGPPALIPASSALL Trigger: GAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGTGAAGGGCTGAATAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | ATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCCCTCACCGGGACGGGCCACCCCTaGCCCCACCTATTCGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: MGGTPSADSSFLSPAPLTGTGHP*PHLFAV Trigger: AACAGCGAATAGGTGGGGGCAGGGGTGGCCCGTCCC...GGTGAGGGGAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | ATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCCCTCACCACCTCGCCCCGGGCATaGAGCATGAAGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: MGGTPSADSSFLSPAPLTTSPRA*SMKWPC Trigger: GCATGGCCACTTCATGCTGCATGCCCGGGGCGAGGT...GGTGAGGGGAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCTCAGCCCTGCTCCCCTCACCCTTCTACCAGCACTCTGGTGGCCCCGCCGTACAGTGGTAGGTaGCCCCCTCCTCCTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QLPQPCSPHPSTSTLVAPPYSGR*PPPPRL Trigger: AAGACGAGGAGGAGGGGGGCACCTACCACTGTACGG...CGGGGCCACCAGAGTGCTGGTAGAAGGGTGAGGGGAGCAGGGCTGAGGAAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTGATCGGCCGCAGAGCTaGCAAGGCTGTGCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: TTQMGGTPSADSSFLSPADRPQS*QGCAGG Trigger: CCCACCTGCACAGCCTTGCCAGCTCTGCGGCCGATC...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | CACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCCCAGCCTCCAGTCTCAGTaGGTTCACGGGTCTCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: HRWAGPPALIPASSALLPSLQSQ*VHGSLS Trigger: TGACAGAGACCCGTGAACCCACTGAGACTGGAGGCT...GGGGAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCGTACAGTGGTAGGTaGCCCCCTCCTCCTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TTQMGGTPSADSSFLSPAPYSGR*PPPPRL Trigger: AAGACGAGGAGGAGGGGGGCACCTACCACTGTACGG...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTGCATGCAGCATGAAGTaGCCATGCAGCTCCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TTQMGGTPSADSSFLSPAACSMK*PCSSPR Trigger: CCTCGGGGAGCTGCATGGCCACTTCATGCTGCATGC...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR TCA 90 bp | CACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCCCCTCAGAGTCGGGCTCTaGAAGAGTGTATTCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HRWAGPPALIPASSALLPLRVGL*KSVFRV Trigger: GACTCTGAATACACTCTTTCAGAGCCCGACTCTGAG...GGGGAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCCCCTCACCATTCGGGGTCATCAGTaGTCTCCTCTTCCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: MGGTPSADSSFLSPAPLTIRGHQ*SPLPLP Trigger: AGGAAGAGGAAGAGGAGACCACTGATGACCCCGAAT...GGTGAGGGGAGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR TCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTCCCGGGCATGCAGCATaGAGTGGCCATGCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAPGHAA*SGHAAP Trigger: GGGAGCTGCATGGCCACTTCATGCTGCATGCCCGGG...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTGGGACGGGCCACCCCTaGCCCCACCTATTCGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAGTGHP*PHLFAV Trigger: AACAGCGAATAGGTGGGGGCAGGGGTGGCCCGTCCC...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | TCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCCTCTCCAAGAGCCCTaGTCTCAGGGCCTGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: STAKTTQMGGTPSADSSFPLQEP*SQGLGL Trigger: AAGCCCCAGGCCCTGAGAGCAGGGCTCTTGGAGAGG...GAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCTCAGCCCTGCTCCCCTCACCCTTCTACCAGCACTCTGGTGGCCCCGATTCGGGGTCATCAGTaGTCTCCTCTTCCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QLPQPCSPHPSTSTLVAPIRGHQ*SPLPLP Trigger: AGGAAGAGGAAGAGGAGACCACTGATGACCCCGAAT...CGGGGCCACCAGAGTGCTGGTAGAAGGGTGAGGGGAGCAGGGCTGAGGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR TCA 90 bp | ACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCCCCGGGCATGCAGCATaGAGTGGCCATGCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TLSTAKTTQMGGTPSADSPGHAA*SGHAAP Trigger: GGGAGCTGCATGGCCACTTCATGCTGCATGCCCGGG...GGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTGGGCCTGGGGCTTCTTaGGTTGCTGTTGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAGPGAS*VAVAGQ Trigger: CTGCCCTGCAACAGCAACCCAAGAAGCCCCAGGCCC...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTAGAATGCTCCGGGCCTaGGGAAAGGTCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: TTQMGGTPSADSSFLSPARMLRA*GKVFII Trigger: GATGATGAAGACCTTTCCCCAGGCCCGGAGCATTCT...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | ACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCACCTCGCCCCGGGCATaGAGCATGAAGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: TLSTAKTTQMGGTPSADSTSPRA*SMKWPC Trigger: GCATGGCCACTTCATGCTGCATGCCCGGGGCGAGGT...GGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCGGGCCTGGGGCTTCTTaGGTTGCTGTTGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TLSTAKTTQMGGTPSADSGPGAS*VAVAGQ Trigger: CTGCCCTGCAACAGCAACCCAAGAAGCCCCAGGCCC...GGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTCCTGCTCTCAGGGCCTaGGGCTTCTTGGGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAPALRA*GFLGCC Trigger: ACAGCAACCCAAGAAGCCCCAGGCCCTGAGAGCAGG...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTGCATGCAGCATGAAGTaGCCATGCAGCTCCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAACSMK*PCSSPR Trigger: CCTCGGGGAGCTGCATGGCCACTTCATGCTGCATGC...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | TCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCAGCATGAAGTGGCCATaGAGCTCCCCGAGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: STAKTTQMGGTPSADSSFSMKWP*SSPRLS Trigger: TGACAACCTCGGGGAGCTGCATGGCCACTTCATGCT...GAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | ACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCCCTGCTCTCAGGGCCTaGGGCTTCTTGGGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TLSTAKTTQMGGTPSADSPALRA*GFLGCC Trigger: ACAGCAACCCAAGAAGCCCCAGGCCCTGAGAGCAGG...GGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | TATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTTCTTGGGTTGCTGTTaGAGGGCAGCAGAGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: YLQLRQHRWAGPPALIPAFLGCC*RAAESA Trigger: TGCCGACTCTGCTGCCCTGCAACAGCAACCCAAGAA...AGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | ACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCATGAAGTGGCCATaGAGCTCCCCGAGGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLSTAKTTQMGGTPSADSSMKWP*SSPRLS Trigger: TGACAACCTCGGGGAGCTGCATGGCCACTTCATGCT...GGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR GCA 90 bp | TTCACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTTCTTGGGTTGCTGTTaGAGGGCAGCAGAGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: FTLSTAKTTQMGGTPSADFLGCC*RAAESA Trigger: TGCCGACTCTGCTGCCCTGCAACAGCAACCCAAGAA...ATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CCA 90 bp | CATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCACTCAGAGTCGGGCTCTaGGGAAAGGTCTTCATCATC | + |
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Preference number: 4 (lower is better) Translates to: HYLQLRQHRWAGPPALIPLRVGL*GKVFII Trigger: GATGATGAAGACCTTTCCCCAGAGCCCGACTCTGAG...TGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071361.13 |
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| CDS TCA 90 bp | GCAGAGTCGGCAAGGTGGGGTACCCGGCGGGGCCTCTCCCAGCGCTaGTCGGCCGCAGAGCTGGCAAGGCTGTGCAGGTGGGCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AESARWGTRRGLSQR*SAAELARLCRWASR Trigger: CCTGCTGGCCCACCTGCACAGCCTTGCCAGCTCTGCGGCCGATCAGCGCTGGGAGAGGCCCCGCCGGGTACCCCACCTTGCCGACTCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071361.13 ENSMUST00000176880.2 ENSMUST00000177205.2 |
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| CDS-3UTR CAA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTAGGGCCTGGGGCTTCTaGGGTTGCTGTTGCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TTQMGGTPSADSSFLSPARAWGF*GCCCRA Trigger: TGCCCTGCAACAGCAACCCAAGAAGCCCCAGGCCCT...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CAA 90 bp | ACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAGCTTCCTCAGCCCTGCTCTTCTTGGGTTGCTGTaGCAGGGCAGCAGAGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: TTQMGGTPSADSSFLSPALLGLL*QGSRVG Trigger: GCCGACTCTGCTGCCCTGCAACAGCAACCCAAGAAG...AGCAGGGCTGAGGAAGCTGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CAA 90 bp | CATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCAAGGGCCTGGGGCTTCTaGGGTTGCTGTTGCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HYLQLRQHRWAGPPALIPRAWGF*GCCCRA Trigger: TGCCCTGCAACAGCAACCCAAGAAGCCCCAGGCCCT...TGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATCTTCTTGGGTTGCTGTaGCAGGGCAGCAGAGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: FTLSTAKTTQMGGTPSADLLGLL*QGSRVG Trigger: GCCGACTCTGCTGCCCTGCAACAGCAACCCAAGAAG...ATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS-3UTR CAA 90 bp | CATTATCTACAGCTAAGACAACACAGATGGGCGGGACCCCCAGCGCTGATTCCATGCAGCTCCCCGAGGTaGTCAAAGGAGTCCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: HYLQLRQHRWAGPPALIPCSSPR*SKESSH Trigger: GTGTGAGGACTCCTTTGACAACCTCGGGGAGCTGCA...TGGAATCAGCGCTGGGGGTCCCGCCCATCTGTGTTGTCTTAGCTGTAGATAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS TCA 72 bp | GCAAGGTGGGGTACCCGGCGGGGCCTCTCCCAGCGCTaGTCGGCCGCAGAGCTGGCAAGGCTGTGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ARWGTRRGLSQR*SAAELARLCRW Trigger: CCACCTGCACAGCCTTGCCAGCTCTGCGGCCGATCAGCGCTGGGAGAGGCCCCGCCGGGTACCCCACCTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071361.13 ENSMUST00000176880.2 ENSMUST00000177205.2 |
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| CDS CCA 72 bp | GGCGGGGCCTCTCCCAGCGCTGATCGGCCGCAGAGCTaGCAAGGCTGTGCAGGTGGGCCAGCAGGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GGASPSADRPQS*QGCAGGPAGWV Trigger: AACCCAGCCTGCTGGCCCACCTGCACAGCCTTGCCAGCTCTGCGGCCGATCAGCGCTGGGAGAGGCCCCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071361.13 ENSMUST00000176880.2 ENSMUST00000177205.2 |
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| CDS GCA 72 bp | TACACCTCGCCCCGGGCATGCAGCATGAAGTGGCCATaGAGCTCCCCGAGGTTGTCAAAGGAGTCCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: YTSPRACSMKWP*SSPRLSKESSH Trigger: GTGTGAGGACTCCTTTGACAACCTCGGGGAGCTGCATGGCCACTTCATGCTGCATGCCCGGGGCGAGGTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071361.13 ENSMUST00000177205.2 |
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| CDS CCA 72 bp | GGCCTGGGGAAAGGTCTTCATCATCTTCCTCCAAGCTaGCGTAGCCTCCAGTCTCAGTGGGTTCACGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GLGKGLHHLPPS*RSLQSQWVHGS Trigger: AGACCCGTGAACCCACTGAGACTGGAGGCTACGCCAGCTTGGAGGAAGATGATGAAGACCTTTCCCCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176880.2 ENSMUST00000177205.2 |
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| CDS CCA 72 bp | GCTCTGGGGAAAGGTCTTCATCATCTTCCTCCAAGCTaGCGTAGCCTCCAGTCTCAGTGGGTTCACGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: ALGKGLHHLPPS*RSLQSQWVHGS Trigger: AGACCCGTGAACCCACTGAGACTGGAGGCTACGCCAGCTTGGAGGAAGATGATGAAGACCTTTCCCCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071361.13 |
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