Pregenerated sensors for ZFP426 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059475Ensembl transcript IDs: ENSMUST00000080386.13, ENSMUST00000115562.9, ENSMUST00000163348.8, ENSMUST00000163427.8, ENSMUST00000164799.8, ENSMUST00000164825.8, ENSMUST00000166005.8, ENSMUST00000167457.8, ENSMUST00000168095.8, ENSMUST00000169269.8, ENSMUST00000169558.8
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAAATCCCCTTCACCTAGTTATGAATGGCTACAAGCTACCATGTaGGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PKSPSPSYEWLQATM*VLGTEAWLSESTAG Trigger: ACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCCATTCATAACTAGGTGAAGGGGATTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR TCA 90 bp | AGAAGTCTCCATATTGCGTCCCATCACAGAGCTCCCTTCCTCTGTTaGTTCCTGTCTGCATTTGCATTCTACTGGATATGTTACCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RSLHIASHHRAPFLC*FLSAFAFYWICYPS Trigger: TGAGGGGTAACATATCCAGTAGAATGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGCTCTGTGATGGGACGCAATATGGAGACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
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| 3UTR GCA 90 bp | TCCATTTGCAGAAGGCTGTCTGAAGTTTCCATGGTCTTCTCTGTGTaGATCCTGCAGCATCTTAACCTCTTGAGGACATTAGTCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: SICRRLSEVSMVFSV*ILQHLNLLRTLVTS Trigger: AGAAGTGACTAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR CCA 90 bp | TTTCTCACGTGTGTGTGCATAAGCCAATATGCCAGTGTGTATTCATaGAGACTAGAGGACAGTTTGTGGAAGTCAGTTCTCTCCTTACAC | + |
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Preference number: 1 (lower is better) Translates to: FLTCVCISQYASVYS*RLEDSLWKSVLSLH Trigger: GTGTAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATGCACACACACGTGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR CCA 90 bp | AGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTaGAAGTCAGTTCTCTCCTTACACACACAATTTGTTAGAGTTAAT | + |
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Preference number: 1 (lower is better) Translates to: SQYASVYSWRLEDSL*KSVLSLHTQFVRVN Trigger: ATTAACTCTAACAAATTGTGTGTGTAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | GATCACAGAGGCCAGAAGGGGCCCAAATCCCCTTCACCTAGTTATGAATGGCTACTGCAAGGTTGCAGGTaGTCTTGTAGGAATGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: DHRGQKGPKSPSPSYEWLLQGCR*SCRNAE Trigger: CTCAGCATTCCTACAAGATCACCTGCAACCTTGCAG...TAGCCATTCATAACTAGGTGAAGGGGATTTGGGCCCCTTCTGGCCTCTGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATTTCAGCCACAGCATTCATGTaGAGGTCAGAGGGCAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: WELKPGSLKVQQVPVTISATAFM*RSEGSF Trigger: AAAGCTGCCCTCTGACCTCCACATGAATGCTGTGGC...TGAAATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTGCAGAAGGCTGTCTGAAGTTTCCATGGTCTTCTCTGTGTGCATCCTGCCTGGGAACTGAAGCCTaGCTCTCTGAAAGTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PFAEGCLKFPWSSLCASCLGTEA*LSESTA Trigger: TGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAG...GCAGGATGCACACAGAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | GATCACAGAGGCCAGAAGGGGCCCAAATCCCCTTCACCTAGTTATGAATGGCTATGTCTTCAAAGTACATaGGCACAAACAAGGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DHRGQKGPKSPSPSYEWLCLQST*AQTRAS Trigger: GGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACA...TAGCCATTCATAACTAGGTGAAGGGGATTTGGGCCCCTTCTGGCCTCTGTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | AACACAAGCAGATCAATAGCAAGTTCCAGGACAGACAGAAAGACGGGGCTACATCTACAAGCTACCATGTaGGTGCTGGGAACTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: NTSRSIASSRTDRKTGLHLQATM*VLGTEA Trigger: GGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAG...ATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTTGCTATTGATCTGCTTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
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| 3UTR CAA 90 bp | CGTCCCATCACAGAGCTCCCTTCCTCTGTTGATTCCTGTCTGCATTaGCATTCTACTGGATATGTTACCCCTCAGAAATTCCTGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: RPITELPSSVDSCLH*HSTGYVTPQKFLLE Trigger: TTCCAGCAGGAATTTCTGAGGGGTAACATATCCAGTAGAATGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGCTCTGTGATGGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGAGGTCAGAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGCTGCAAGGTTGCAGGTaGTCTTGTAGGAATGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: MWRSEGSFLGANSLFTMWLQGCR*SCRNAE Trigger: CTCAGCATTCCTACAAGATCACCTGCAACCTTGCAG...CCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTCTGACCTCCACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATATGGAGTATTTGTGTTaGTCAGTATGGCAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: VLGTEAWLSESTAGACNYMEYLC*SVWQHS Trigger: GCTGTGTTGCCATACTGAGCAACACAAATACTCCAT...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTAGTAGAAACACTTGTGGTAGCCACTTGTCTCCATTTGCAGAAGGCTGTAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSRNTCGSHLSPFAEGCKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...ACAGCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGTGTTTCTACTAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTACAAGCTACCATGTGAGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACTAGAGGACAGTTTGTaGAAGTCAGTTCTCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GYKLPCECWELKPGSLKVLEDSL*KSVLSL Trigger: TAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAG...TACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR CAA 90 bp | AAGAAGTCTCCATATTGCGTCCCATCACAGAGCTCCCTTCCTCTGTaGATTCCTGTCTGCATTTGCATTCTACTGGATATGTTACCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KKSPYCVPSQSSLPL*IPVCICILLDMLPL Trigger: GAGGGGTAACATATCCAGTAGAATGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAGAAACACAAGCAGATCAATAGCAAGTTCCAGGACAGACAGAAAGACGGGGTTGCAGAAGGCTGTCTaGAGTTTCCATGGTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LRNTSRSIASSRTDRKTGLQKAV*SFHGLL Trigger: GAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAA...CCCCGTCTTTCTGTCTGTCCTGGAACTTGCTATTGATCTGCTTGTGTTTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
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| 3UTR-3UTR GCA 90 bp | GATCACAGAGGCCAGAAGGGGCCCAAATCCCCTTCACCTAGTTATGAATGGCTAGACATTTCCATCAAGTaGTTTTACCCACTGAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: DHRGQKGPKSPSPSYEWLDISIK*FYPLSY Trigger: ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTC...TAGCCATTCATAACTAGGTGAAGGGGATTTGGGCCCCTTCTGGCCTCTGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATCTGTTGATTCCTGTCTaGATTTGCATTCTACTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VLGTEAWLSESTAGACNYLLIPV*ICILLD Trigger: ATCCAGTAGAATGCAAATGCAGACAGGAATCAACAG...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCACTGGGAACTGAAGCCTaGCTCTCTGAAAGTACAGCA | + |
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Preference number: 2 (lower is better) Translates to: SQYASVYSWRLEDSLWKSLGTEA*LSESTA Trigger: TGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAG...TGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTACAAGCTACCATGTGAGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTATTACAATCTGGCAGCTaGAAATCAGAGATCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: GYKLPCECWELKPGSLKVLQSGS*KSEISI Trigger: TATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAA...TACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | CATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAACTGCAAGGTTGCAGGTaGTCTTGTAGGAATGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HKPICQCVFMETRGQFVELQGCR*SCRNAE Trigger: CTCAGCATTCCTACAAGATCACCTGCAACCTTGCAG...TTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTGGCCTGCAAATGGAGTATTTGTGTTaGTCAGTATGGCAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: LVESVFLSAMLHKLAGLQMEYLC*SVWQHS Trigger: GCTGTGTTGCCATACTGAGCAACACAAATACTCCAT...TTGCAGGCCAGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR CAA 90 bp | GTTTCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTaGAGGACATTAGTCACTTCTAATGGACTCATGGCAACCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: VSMVFSVCILQHLNL*RTLVTSNGLMATSF Trigger: AAATGAGGTTGCCATGAGTCCATTAGAAGTGACTAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTATCTGTCTTCAAAGTACATaGGCACAAACAAGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GVFVLLSMATQHCSKLSICLQST*AQTRAS Trigger: GGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACA...GATACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATGTCTTCAAAGTACATaGGCACAAACAAGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GQIQAVRHFHQVLLPTELCLQST*AQTRAS Trigger: GGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACA...TAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCCTACAAGCTACCATGTaGGTGCTGGGAACTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFLQATM*VLGTEA Trigger: GGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAG...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATTATTTCAATCATCTCTaGAGTCCCTCACTTGAATTT | + |
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Preference number: 2 (lower is better) Translates to: VLGTEAWLSESTAGACNYYFNHL*SPSLEF Trigger: AAATTCAAGTGAGGGACTGCAGAGATGATTGAAATA...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCACCACTTGTCTCCATTTaGAGAAGGCTGTCTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SQYASVYSWRLEDSLWKSPLVSI*RRLSEV Trigger: AACTTCAGACAGCCTTCTGCAAATGGAGACAAGTGG...TGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCGCCACAGCATTCATGTaGAGGTCAGAGGGCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFATAFM*RSEGSF Trigger: AAAGCTGCCCTCTGACCTCCACATGAATGCTGTGGC...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGACAGACAGAAAGACGGGGCTACATTGAGAAACCTTATCTTAAAACAAATAGCCACAGCATTCATGTaGAGGTCAGAGGGCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QDRQKDGATLRNLILKQIATAFM*RSEGSF Trigger: AAAGCTGCCCTCTGACCTCCACATGAATGCTGTGGC...TATTTGTTTTAAGATAAGGTTTCTCAATGTAGCCCCGTCTTTCTGTCTGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCTACCTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTTGTCTTCAAAGTACATaGGCACAAACAAGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: IFYLVESVFLSAMLHKLACLQST*AQTRAS Trigger: GGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACA...AGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAGGTAGAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCAGTGCTTTTACCCACTaGGCTATCTTGCCAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFSAFTH*AILPAS Trigger: GGATGCTGGCAAGATAGCTCAGTGGGTAAAAGCACT...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISQYASVYSWRLEDSLWKMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...CTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATAATGGAGTATTTGTGTTaGTCAGTATGGCAACACAGC | + |
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Preference number: 2 (lower is better) Translates to: EGSFLGANSLFTMWDSGIMEYLC*SVWQHS Trigger: GCTGTGTTGCCATACTGAGCAACACAAATACTCCAT...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGGTTTGCCTGCACATATaGACTCATGTGTATGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ISQYASVYSWRLEDSLWKVCLHI*THVYAE Trigger: CTCAGCATACACATGAGTGCATATGTGCAGGCAAAC...CTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | CATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAATGTCTGAAGTTTCCATaGTCTTCTCTGTGTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: HKPICQCVFMETRGQFVECLKFP*SSLCAS Trigger: GGATGCACACAGAGAAGACCATGGAAACTTCAGACA...TTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATAGACATTTCCATCAAGTaGTTTTACCCACTGAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: EGSFLGANSLFTMWDSGIDISIK*FYPLSY Trigger: ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTC...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCTTAGTAGAAACACTTGTGGTAGCCACTTGTCTCCATTTGCAGAAGGCTGTATTTTATACATGGTTTaGCTGCACATATGCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: GLSRNTCGSHLSPFAEGCILYMV*LHICTH Trigger: ATGAGTGCATATGTGCAGGCAAACCATGTATAAAAT...ACAGCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGTGTTTCTACTAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
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| 3UTR-3UTR CCA 90 bp | CATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAAAAATGTACTATTATTaGGGGGAGTGCATGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HKPICQCVFMETRGQFVEKMYYY*GECMPQ Trigger: CTGTGGCATGCACTCCCCCCAATAATAGTACATTTT...TTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTTGAGGACATTAACCATAATTATCCTGTaGAGGTTGAGTTTTCATATC | + |
|
Preference number: 2 (lower is better) Translates to: SMVFSVCILQHLNLLRTLTIIIL*RLSFHI Trigger: GATATGAAAACTCAACCTGCACAGGATAATTATGGT...TAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCTGTCTGAAGTTTCCATaGTCTTCTCTGTGTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFCLKFP*SSLCAS Trigger: GGATGCACACAGAGAAGACCATGGAAACTTCAGACA...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR CAA 90 bp | ATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTaGTGGAAGTCAGTTCTCTCCTTACACACACAATTTGTTAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ISQYASVYSWRLEDS*WKSVLSLHTQFVRV Trigger: AACTCTAACAAATTGTGTGTGTAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGGCACAGTTTTTCCTCTaGAGCATTAGAAAGTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ISQYASVYSWRLEDSLWKAQFFL*SIRKSF Trigger: AAAAGACTTTCTAATGCTTCAGAGGAAAAACTGTGC...CTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR-3UTR GCA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCGTTTGCCTGCACATATaGACTCATGTGTATGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NHICKSQLRNTSRSIASSVCLHI*THVYAE Trigger: CTCAGCATACACATGAGTGCATATGTGCAGGCAAAC...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCAAAATGTACTATTATTaGGGGGAGTGCATGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFKMYYY*GECMPQ Trigger: CTGTGGCATGCACTCCCCCCAATAATAGTACATTTT...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTCCAGGACAGACAGAAAGACGGGGCTACATTGAGAAACCTTATCTTAAAATTACAATCTGGCAGCTaGAAATCAGAGATCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: KFQDRQKDGATLRNLILKLQSGS*KSEISI Trigger: TATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAA...TTTTAAGATAAGGTTTCTCAATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTCTCTTGTGTATCAATTTTCTCTTTAACTGGGGTCATGCCGGTTTCTTCAGCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PFSCVSIFSLTGVMPVSSAFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGC...TGAAGAAACCGGCATGACCCCAGTTAAAGAGAAAATTGATACACAAGAGAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTCCAGGACAGACAGAAAGACGGGGCTACATTGAGAAACCTTATCTTAAAAGGGAAAACTATCTTCTaGCCTTTACTAAACTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KFQDRQKDGATLRNLILKGKTIF*PLLNSS Trigger: AGAAGAGTTTAGTAAAGGTCAGAAGATAGTTTTCCC...TTTTAAGATAAGGTTTCTCAATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTATTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTGCCTGCACATATaGACTCATGTGTATGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: IYFLQSGSWKSEISIIQVVCLHI*THVYAE Trigger: CTCAGCATACACATGAGTGCATATGTGCAGGCAAAC...TACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTATTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTATGTCTGAAGTTTCCATaGTCTTCTCTGTGTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: IYFLQSGSWKSEISIIQVCLKFP*SSLCAS Trigger: GGATGCACACAGAGAAGACCATGGAAACTTCAGACA...TACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR GCA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCTATTTCAATCATCTCTaGAGTCCCTCACTTGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: NHICKSQLRNTSRSIASSYFNHL*SPSLEF Trigger: AAATTCAAGTGAGGGACTGCAGAGATGATTGAAATA...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTATTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAATTTTATACATGGTTTaGCTGCACATATGCACTCAT | + |
|
Preference number: 2 (lower is better) Translates to: IYFLQSGSWKSEISIIQVILYMV*LHICTH Trigger: ATGAGTGCATATGTGCAGGCAAACCATGTATAAAAT...TACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAATAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR TCA 72 bp | GTTTGCCTGCACATATGCACTCATGTGTATGCTGAGTaGTCACAGAGGCCAGAAGGGGCCCAAATCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VCLHICTHVYAE*SQRPEGAQIPF Trigger: GAAGGGGATTTGGGCCCCTTCTGGCCTCTGTGATCACTCAGCATACACATGAGTGCATATGTGCAGGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR TCA 72 bp | CATGGTTTGCCTGCACATATGCACTCATGTGTATGCTaGGTGATCACAGAGGCCAGAAGGGGCCCAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: HGLPAHMHSCVC*VITEARRGPNP Trigger: GGGATTTGGGCCCCTTCTGGCCTCTGTGATCACTCAGCATACACATGAGTGCATATGTGCAGGCAAACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATACTTGTGGTAGCCACTaGTCTCCATTTGCAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLGTEAWLSESTAGACNYTCGSH*SPFAEG Trigger: GCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGT...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR TCA 72 bp | GTGGTAGCCACTTGTCTCCATTTGCAGAAGGCTGTCTaGAGTTTCCATGGTCTTCTCTGTGTGCATCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVATCLHLQKAV*SFHGLLCVHPA Trigger: TGCAGGATGCACACAGAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAAATGGAGACAAGTGGCTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR TCA 72 bp | CCTTCACCTAGTTATGAATGGCTACAAGCTACCATGTaGGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSPSYEWLQATM*VLGTEAWLSES Trigger: ACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCCATTCATAACTAGGTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR CCA 72 bp | CTAGTTATGAATGGCTACAAGCTACCATGTGAGTGCTaGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVMNGYKLPCEC*ELKPGSLKVQQ Trigger: CTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCCATTCATAACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR GCA 72 bp | TGGGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTaGTTTTACCCACTGAGCTATCTTGCCAGCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: WVRFKLSDISIK*FYPLSYLASIH Trigger: GTGGATGCTGGCAAGATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTTGAGGACATTAAAGGGCTTCCTCACATaGCTTCCATCAATTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SMVFSVCILQHLNLLRTLKGFLT*LPSIRL Trigger: AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTT...TAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR TCA 72 bp | TTCTCTTTAACTGGGGTCATGCCGGTTTCTTCACTCTaGCTGAACTCAGAAAGTTTCTCACCAGCACAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSLTGVMPVSSL*LNSESFSPAQF Trigger: AAACTGTGCTGGTGAGAAACTTTCTGAGTTCAGTCAGAGTGAAGAAACCGGCATGACCCCAGTTAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCAGTTAAGGGCTTCCTCACATaGCTTCCATCAATTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QYASVYSWRLEDSLWKSVKGFLT*LPSIRL Trigger: AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTT...AACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATCTCATGGAGTATTTGTGTaGCTCAGTATGGCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: QIQAVRHFHQVLLPTELSHGVFV*LSMATQ Trigger: CTGTGTTGCCATACTGAGCAACACAAATACTCCATG...AGATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGAGGTCAGAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCCTGTCTGCATTaGCATTCTACTGGATATGTT | + |
|
Preference number: 3 (lower is better) Translates to: MWRSEGSFLGANSLFTMWDSCLH*HSTGYV Trigger: AACATATCCAGTAGAATGCAAATGCAGACAGGAATC...CCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTCTGACCTCCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| 3UTR TCA 72 bp | GTGGTATATGTAGGAGGGTGGGCAGAAACATGGAGATaGGAGGTCAACTTTAAGGCATTAAATCTTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VVYVGGWAETWR*EVNFKALNLLP Trigger: AGGTAGAAGATTTAATGCCTTAAAGTTGACCTCTCATCTCCATGTTTCTGCCCACCCTCCTACATATACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR GCA 72 bp | TGCATTCTACTGGATATGTTACCCCTCAGAAATTCCTaGTGGAACGCTGAACATTTGGTTTCGAGCTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CILLDMLPLRNS*WNAEHLVSSCN Trigger: ATTACAGCTCGAAACCAAATGTTCAGCGTTCCAGCAGGAATTTCTGAGGGGTAACATATCCAGTAGAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| 3UTR CCA 72 bp | GCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTaGAAGTCAGTTCTCTCCTTACACACACAATTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASVYSWRLEDSL*KSVLSLHTQFV Trigger: AACAAATTGTGTGTGTAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR CCA 72 bp | TACCCCTCAGAAATTCCTGCTGGAACGCTGAACATTTaGTTTCGAGCTGTAATTTCCATTCTGGGAAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: YPSEIPAGTLNI*FRAVISILGKL Trigger: TAGTTTTCCCAGAATGGAAATTACAGCTCGAAACCAAATGTTCAGCGTTCCAGCAGGAATTTCTGAGGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCAGGACAGACAGAAAGACGGGGCTACATTGAGAAACCTTATCTTAAAAAAGGGCTTCCTCACATaGCTTCCATCAATTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KFQDRQKDGATLRNLILKKGFLT*LPSIRL Trigger: AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTT...TTTTAAGATAAGGTTTCTCAATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTTGAGGACATTATATTTTATACATGGTTaGCCTGCACATATGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SMVFSVCILQHLNLLRTLYFIHG*PAHMHS Trigger: TGAGTGCATATGTGCAGGCAAACCATGTATAAAATA...TAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCAAGGGCTTCCTCACATaGCTTCCATCAATTAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NHICKSQLRNTSRSIASSKGFLT*LPSIRL Trigger: AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTT...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCAAATCTTCTACCTTGTaGAGTCAGTCTTCCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFKSSTL*SQSSSL Trigger: CAGAGAGGAAGACTGACTCAACAAGGTAGAAGATTT...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATGTGTGTCTGAAGGTGTaGCTGGCTCATAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEAWLSESTAGACNYVCLKV*LAHKGL Trigger: AAGTCCTTTATGAGCCAGTCACACCTTCAGACACAC...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEAWLSESTAGACNYKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATATCCTCTGAAGGACCATaGGACGAAGCAGGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGSFLGANSLFTMWDSGISSEGP*DEAGAA Trigger: GGCAGCTCCTGCTTCGTCCCATGGTCCTTCAGAGGA...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGTCCTCTGAAGGACCATaGGACGAAGCAGGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKYMSTNKGFLTLLPSIRSSEGP*DEAGAA Trigger: GGCAGCTCCTGCTTCGTCCCATGGTCCTTCAGAGGA...CCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTTCCTCTGAAGGACCATaGGACGAAGCAGGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLSSEGP*DEAGAA Trigger: GGCAGCTCCTGCTTCGTCCCATGGTCCTTCAGAGGA...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCATCCTCTGAAGGACCATaGGACGAAGCAGGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSSKYMSTNKGFLTLLPSSSEGP*DEAGAA Trigger: GGCAGCTCCTGCTTCGTCCCATGGTCCTTCAGAGGA...TGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CCATTTGCAGAAGGCTGTCTGAAGTTTCCATGGTCTTCTCTGTGTGCATCCTGCAAGCTCACTAACTCCTaGTCATCTGTCAGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PFAEGCLKFPWSSLCASCKLTNS*SSVRQS Trigger: TGATTGCCTGACAGATGATCAGGAGTTAGTGAGCTT...GCAGGATGCACACAGAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGCTACAAGCTACCATGTGAGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTATTATCCTGTGCAGGTTaGGTTTTCATATCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYKLPCECWELKPGSLKVLSCAG*VFISVL Trigger: CAGGACAGATATGAAAACTCAACCTGCACAGGATAA...TACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTTAGTAGAAACACTTGTGGTAGCCACTTGTCTCCATTTGCAGAAGGCTGTGTGTGTCTGAAGGTGTaGCTGGCTCATAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLSRNTCGSHLSPFAEGCVCLKV*LAHKGL Trigger: AAGTCCTTTATGAGCCAGTCACACCTTCAGACACAC...ACAGCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGTGTTTCTACTAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AACACAAGCAGATCAATAGCAAGTTCCAGGACAGACAGAAAGACGGGGCTACATGTTCTCTGGTGTGTCTaGAGGTGTGACTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NTSRSIASSRTDRKTGLHVLWCV*RCDWLI Trigger: TATGAGCCAGTCACACCTTCAGACACACCAGAGAAC...ATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTTGCTATTGATCTGCTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATTTCTTCATGGATCTGAAATaGAGTGGAGTGACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGTEAWLSESTAGACNYFFMDLK*SGVTEG Trigger: GCCTTCAGTCACTCCACTTCATTTCAGATCCATGAA...GAAATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTTGAGGACATTATTCATGTCTGCGAAGTaGACGAGGATGACTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMVFSVCILQHLNLLRTLFMSAK*TRMTVG Trigger: GCCTACAGTCATCCTCGTTCACTTCGCAGACATGAA...TAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATGTCTTCTCTTCAGCATaGAACTTCAGATGCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEAWLSESTAGACNYVFSSA*NFRCPL Trigger: TAATGGGCATCTGAAGTTGCATGCTGAAGAGAAGAC...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCGCTCCCTTCCTCTGTTaGTTCCTGTCTGCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASIAPFLC*FLSAFA Trigger: TGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGC...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCAGTTCTCTGGTGTGTCTaGAGGTGTGACTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SQYASVYSWRLEDSLWKSVLWCV*RCDWLI Trigger: TATGAGCCAGTCACACCTTCAGACACACCAGAGAAC...TGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGTTCTCTGGTGTGTCTaGAGGTGTGACTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSVLWCV*RCDWLI Trigger: TATGAGCCAGTCACACCTTCAGACACACCAGAGAAC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTTTCATGTCTGCGAAGTaGACGAGGATGACTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSFMSAK*TRMTVG Trigger: GCCTACAGTCATCCTCGTTCACTTCGCAGACATGAA...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTATCTTCATGTCTGCGAAGTaGACGAGGATGACTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVFVLLSMATQHCSKLSIFMSAK*TRMTVG Trigger: GCCTACAGTCATCCTCGTTCACTTCGCAGACATGAA...GATACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAGCTACCATGTGAGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACTGTTGATTCCTGTCTaGATTTGCATTCTACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GYKLPCECWELKPGSLKVLLIPV*ICILLD Trigger: ATCCAGTAGAATGCAAATGCAGACAGGAATCAACAG...TACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | AACGCTGAACATTTGGTTTCGAGCTGTAATTTCCATTCTGGGAAAACTATCTTCTCCTCTGAAGGACCATaGGACGAAGCAGGAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NAEHLVSSCNFHSGKTIFSSEGP*DEAGAA Trigger: GGCAGCTCCTGCTTCGTCCCATGGTCCTTCAGAGGA...GAAGATAGTTTTCCCAGAATGGAAATTACAGCTCGAAACCAAATGTTCAGCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| 3UTR CAA 72 bp | TCTGGAGGCCTTAGTAGAAACACTTGTGGTAGCCACTaGTCTCCATTTGCAGAAGGCTGTCTGAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGLSRNTCGSH*SPFAEGCLKFP Trigger: TGGAAACTTCAGACAGCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGTGTTTCTACTAAGGCCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTCTACCTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTGCTCCCTTCCTCTGTTaGTTCCTGTCTGCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFYLVESVFLSAMLHKLAAPFLC*FLSAFA Trigger: TGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGC...AGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAGGTAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTGCTCCCTTCCTCTGTTaGTTCCTGTCTGCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLAPFLC*FLSAFA Trigger: TGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGC...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGCTACAAGCTACCATGTGAGTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTAGCACAGTTTTTCCTCTaGAGCATTAGAAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYKLPCECWELKPGSLKVAQFFL*SIRKSF Trigger: AAAAGACTTTCTAATGCTTCAGAGGAAAAACTGTGC...TACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCACTCACATGGTAGCTTGTAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGTGTGTCTGAAGGTGTaGCTGGCTCATAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSVCLKV*LAHKGL Trigger: AAGTCCTTTATGAGCCAGTCACACCTTCAGACACAC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCGTGTGTCTGAAGGTGTaGCTGGCTCATAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLVCLKV*LAHKGL Trigger: AAGTCCTTTATGAGCCAGTCACACCTTCAGACACAC...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAGTTCTCTGGTGTGTCTaGAGGTGTGACTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: MSSKYMSTNKGFLTLLPSVLWCV*RCDWLI Trigger: TATGAGCCAGTCACACCTTCAGACACACCAGAGAAC...TGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTGTTCTCTGGTGTGTCTaGAGGTGTGACTGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLVLWCV*RCDWLI Trigger: TATGAGCCAGTCACACCTTCAGACACACCAGAGAAC...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGAAACACAAGCAGATCAATAGCAAGTTCCAGGACAGACAGAAAGACGGGGATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNTSRSIASSRTDRKTGMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...CCCCGTCTTTCTGTCTGTCCTGGAACTTGCTATTGATCTGCTTGTGTTTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR TCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTTTCATGTCTGCGAAGTaGACGAGGATGACTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHIFMSAK*TRMTVG Trigger: GCCTACAGTCATCCTCGTTCACTTCGCAGACATGAA...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGTTCATGTCTGCGAAGTaGACGAGGATGACTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKYMSTNKGFLTLLPSIRFMSAK*TRMTVG Trigger: GCCTACAGTCATCCTCGTTCACTTCGCAGACATGAA...CCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCTCCCTTCCTCTGTTGATTCCTGTCTGCATTTGCATTCTACTGGATATGATGAGCTGATACCCTaGTCATCTGTCAGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TELPSSVDSCLHLHSTGYDELIP*SSVRQS Trigger: TGATTGCCTGACAGATGATCAGGGTATCAGCTCATC...ATATCCAGTAGAATGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163427.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATAACCAACATCATTTCTaGTGCTATTTTTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTEAWLSESTAGACNYNQHHF*CYFSFL Trigger: CAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTT...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HHVFKVHEHKQGLPHIASKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...GGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASIKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTAAAGCTCACTAACTCCTaGTCATCTGTCAGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GQIQAVRHFHQVLLPTELKLTNS*SSVRQS Trigger: TGATTGCCTGACAGATGATCAGGAGTTAGTGAGCTT...TAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCAAGCTCACTAACTCCTaGTCATCTGTCAGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLKLTNS*SSVRQS Trigger: TGATTGCCTGACAGATGATCAGGAGTTAGTGAGCTT...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAAGCTCACTAACTCCTaGTCATCTGTCAGGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASIKLTNS*SSVRQS Trigger: TGATTGCCTGACAGATGATCAGGAGTTAGTGAGCTT...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATGTGTGTCTGAAGGTGTaGCTGGCTCATAAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VRFKLSDISIKCFYPLSYVCLKV*LAHKGL Trigger: AAGTCCTTTATGAGCCAGTCACACCTTCAGACACAC...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGTCTTCTCTGTGTGCATCCTGCAGCATCTTAACCTCTTGAGGACATTAGTGTGGGTTCGCATGTaGATATTTAGATATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMVFSVCILQHLNLLRTLVWVRM*IFRYAG Trigger: TCCTGCATATCTAAATATTCACATGCGAACCCACAC...TAATGTCCTCAAGAGGTTAAGATGCTGCAGGATGCACACAGAGAAGACCATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCAATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQYASVYSWRLEDSLWKSMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...TGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTATCATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVFVLLSMATQHCSKLSIMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...GATACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGTGTGGATTCGCATGTaGATTTTAAGGTGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSVWIRM*ILRWVE Trigger: TTCCACCCACCTTAAAATTCACATGCGAATCCACAC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTATCGTGTGGATTCGCATGTaGATTTTAAGGTGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVFVLLSMATQHCSKLSIVWIRM*ILRWVE Trigger: TTCCACCCACCTTAAAATTCACATGCGAATCCACAC...GATACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCGTGTGGATTCGCATGTaGATTTTAAGGTGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHVFKVHEHKQGLPHIASVWIRM*ILRWVE Trigger: TTCCACCCACCTTAAAATTCACATGCGAATCCACAC...GGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATAGTGTGGATTCGCATGTaGATTTTAAGGTGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSFLGANSLFTMWDSGIVWIRM*ILRWVE Trigger: TTCCACCCACCTTAAAATTCACATGCGAATCCACAC...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCGTGTGGATTCGCATGTaGATTTTAAGGTGGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASIVWIRM*ILRWVE Trigger: TTCCACCCACCTTAAAATTCACATGCGAATCCACAC...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTTTCATGGATCTGAAATaGAGTGGAGTGACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSFMDLK*SGVTEG Trigger: GCCTTCAGTCACTCCACTTCATTTCAGATCCATGAA...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATTTCCAACATCATTTCTGCTaGTATTTTTCGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGTEAWLSESTAGACNYFQHHFC*YFSFLK Trigger: CTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTG...GAAATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHIKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATAAGAAGTCTCCATATTaGGTCCCATCACAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRFKLSDISIKCFYPLSYKKSPY*VPSQSS Trigger: GGAGCTCTGTGATGGGACGCAATATGGAGACTTCTT...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GATCACAGAGGCCAGAAGGGGCCCAAATCCCCTTCACCTAGTTATGAATGGCTAACCATAATTATCCTGTaGAGGTTGAGTTTTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: DHRGQKGPKSPSPSYEWLTIIIL*RLSFHI Trigger: GATATGAAAACTCAACCTGCACAGGATAATTATGGT...TAGCCATTCATAACTAGGTGAAGGGGATTTGGGCCCCTTCTGGCCTCTGTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCACTTCCCACAGTCGCTaGATTCAAACCCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLTSHSR*IQTLSL Trigger: AAGAGAAAGGGTTTGAATGCAGCGACTGTGGGAAGT...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTGGCCTGCAAGCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVESVFLSAMLHKLAGLQAFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGC...TTGCAGGCCAGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| 3UTR CAA 72 bp | ACAGAGCTCCCTTCCTCTGTTGATTCCTGTCTGCATTaGCATTCTACTGGATATGTTACCCCTCAGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TELPSSVDSCLH*HSTGYVTPQKF Trigger: GAATTTCTGAGGGGTAACATATCCAGTAGAATGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTACAATCTGGCAGCTGGAAATCAGAGATCAGCATAATTCAGGTAGTTTCGCTCCCTTCCTCTGTTaGTTCCTGTCTGCATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTIWQLEIRDQHNSGSFAPFLC*FLSAFA Trigger: TGCAAATGCAGACAGGAATCAACAGAGGAAGGGAGC...GAAACTACCTGAATTATGCTGATCTCTGATTTCCAGCTGCCAGATTGTAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATTATCCTGTGCAGGTTaGGTTTTCATATCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQIQAVRHFHQVLLPTELLSCAG*VFISVL Trigger: CAGGACAGATATGAAAACTCAACCTGCACAGGATAA...TAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTGGCCTGCAAGCACAGTTTTTCCTCTaGAGCATTAGAAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVESVFLSAMLHKLAGLQAQFFL*SIRKSF Trigger: AAAAGACTTTCTAATGCTTCAGAGGAAAAACTGTGC...TTGCAGGCCAGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTATCGTGTGGGTTCGCATGTaGATATTTAGATATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVFVLLSMATQHCSKLSIVWVRM*IFRYAG Trigger: TCCTGCATATCTAAATATTCACATGCGAACCCACAC...GATACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGTGTGGGTTCGCATGTaGATATTTAGATATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSVWVRM*IFRYAG Trigger: TCCTGCATATCTAAATATTCACATGCGAACCCACAC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | TACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTATGGATACTAAGACCTaGGTGCTGAGTGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHHVFKVHEHKQGLPHIAMDTKT*VLSEGF Trigger: AAAGCCTTCACTCAGCACTCAGGTCTTAGTATCCAT...AGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATTTCATGGATCTGAAATaGAGTGGAGTGACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRFKLSDISIKCFYPLSYFMDLK*SGVTEG Trigger: GCCTTCAGTCACTCCACTTCATTTCAGATCCATGAA...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTTTCATGGATCTGAAATaGAGTGGAGTGACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHIFMDLK*SGVTEG Trigger: GCCTTCAGTCACTCCACTTCATTTCAGATCCATGAA...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCATTCATGGATCTGAAATaGAGTGGAGTGACTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSSKYMSTNKGFLTLLPSFMDLK*SGVTEG Trigger: GCCTTCAGTCACTCCACTTCATTTCAGATCCATGAA...TGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTTAGTAGAAACACTTGTGGTAGCCACTTGTCTCCATTTGCAGAAGGCTGTCAACATCATTTCTGCTaGTATTTTTCGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSRNTCGSHLSPFAEGCQHHFC*YFSFLK Trigger: CTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTG...ACAGCCTTCTGCAAATGGAGACAAGTGGCTACCACAAGTGTTTCTACTAAGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTACTTCCCACAGTCGCTaGATTCAAACCCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHITSHSR*IQTLSL Trigger: AAGAGAAAGGGTTTGAATGCAGCGACTGTGGGAAGT...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATACTTCCCACAGTCGCTaGATTCAAACCCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRFKLSDISIKCFYPLSYTSHSR*IQTLSL Trigger: AAGAGAAAGGGTTTGAATGCAGCGACTGTGGGAAGT...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGCATGCAACTTCAGATaGCCATTAAGGTTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSACNFR*PLRLEE Trigger: TTCTTCCAACCTTAATGGGCATCTGAAGTTGCATGC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATAGCATGCAACTTCAGATaGCCATTAAGGTTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSFLGANSLFTMWDSGIACNFR*PLRLEE Trigger: TTCTTCCAACCTTAATGGGCATCTGAAGTTGCATGC...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCGCATGCAACTTCAGATaGCCATTAAGGTTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHVFKVHEHKQGLPHIASACNFR*PLRLEE Trigger: TTCTTCCAACCTTAATGGGCATCTGAAGTTGCATGC...GGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCGTCTTCTCTTCAGCATaGAACTTCAGATGCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLVFSSA*NFRCPL Trigger: TAATGGGCATCTGAAGTTGCATGCTGAAGAGAAGAC...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| 3UTR CAA 72 bp | TTACCCCTCAGAAATTCCTGCTGGAACGCTGAACATTaGGTTTCGAGCTGTAATTTCCATTCTGGGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRNSCWNAEH*VSSCNFHSGKT Trigger: AGTTTTCCCAGAATGGAAATTACAGCTCGAAACCAAATGTTCAGCGTTCCAGCAGGAATTTCTGAGGGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| CDS-3UTR TCA 90 bp | TACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTTATCCTGTGCAGGTTaGGTTTTCATATCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHHVFKVHEHKQGLPHIALSCAG*VFISVL Trigger: CAGGACAGATATGAAAACTCAACCTGCACAGGATAA...AGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAATTATCCTGTGCAGGTTaGGTTTTCATATCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKPICQCVFMETRGQFVELSCAG*VFISVL Trigger: CAGGACAGATATGAAAACTCAACCTGCACAGGATAA...TTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACGTGAGTGTGGGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTGTGTGGGTTCGCATGTaGATATTTAGATATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYVSVGQIQAVRHFHQVLVWVRM*IFRYAG Trigger: TCCTGCATATCTAAATATTCACATGCGAACCCACAC...AAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACCCACACTCACGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCCTGTTGATTCCTGTCTaGATTTGCATTCTACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLLLIPV*ICILLD Trigger: ATCCAGTAGAATGCAAATGCAGACAGGAATCAACAG...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | TACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTGTCTTCTCTTCAGCATaGAACTTCAGATGCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: YHHVFKVHEHKQGLPHIAVFSSA*NFRCPL Trigger: TAATGGGCATCTGAAGTTGCATGCTGAAGAGAAGAC...AGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGTCTTCTCTTCAGCATaGAACTTCAGATGCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HKPICQCVFMETRGQFVEVFSSA*NFRCPL Trigger: TAATGGGCATCTGAAGTTGCATGCTGAAGAGAAGAC...TTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTGTCTTCTCTTCAGCATaGAACTTCAGATGCCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLVFSSA*NFRCPL Trigger: TAATGGGCATCTGAAGTTGCATGCTGAAGAGAAGAC...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSAFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAGCTTTTTAGGAGCCAATTCTCTCTTTACAATGTGGGATTCAGGGATAGCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGSFLGANSLFTMWDSGIAFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGC...TATCCCTGAATCCCACATTGTAAAGAGAGAATTGGCTCCTAAAAAGCTGCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| 3UTR CAA 72 bp | TATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTaGTGGAAGTCAGTTCTCTCCTTACACACACAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YASVYSWRLEDS*WKSVLSLHTQF Trigger: AAATTGTGTGTGTAAGGAGAGAACTGACTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| 3UTR CAA 72 bp | TCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATaGCTTCCATCAATTAGGCTTCTCTCTAGTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SKYMSTNKGFLT*LPSIRLLSSEF Trigger: GAATTCACTAGAGAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168095.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGGGAAAACTATCTTCTaGCCTTTACTAAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSGKTIF*PLLNSS Trigger: AGAAGAGTTTAGTAAAGGTCAGAAGATAGTTTTCCC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCGCACAGTTTTTCCTCTaGAGCATTAGAAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASIAQFFL*SIRKSF Trigger: AAAAGACTTTCTAATGCTTCAGAGGAAAAACTGTGC...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTCAACATCATTTCTGCTaGTATTTTTCGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HGVFVLLSMATQHCSKLSQHHFC*YFSFLK Trigger: CTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTG...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAACCAACATCATTTCTaGTGCTATTTTTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASINQHHF*CYFSFL Trigger: CAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTT...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTACCTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTCTGTTGATTCCTGTCTaGATTTGCATTCTACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IFYLVESVFLSAMLHKLALLIPV*ICILLD Trigger: ATCCAGTAGAATGCAAATGCAGACAGGAATCAACAG...AGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAGGTAGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGCCAATATGCCAGTGTGTATTCATGGAGACTAGAGGACAGTTTGTGGAAGGCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISQYASVYSWRLEDSLWKAFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGC...CTTCCACAAACTGTCCTCTAGTCTCCATGAATACACACTGGCATATTGGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
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| CDS-3UTR TCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCACAGTTTTTCCTCTaGAGCATTAGAAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHIAQFFL*SIRKSF Trigger: AAAAGACTTTCTAATGCTTCAGAGGAAAAACTGTGC...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | ATTTACGTGAGTGTGGGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTCAACATCATTTCTGCTaGTATTTTTCGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVSVGQIQAVRHFHQVLQHHFC*YFSFLK Trigger: CTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTG...AAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACCCACACTCACGTAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTAACCAACATCATTTCTaGTGCTATTTTTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHINQHHF*CYFSFL Trigger: CAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTT...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000168095.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCACCATAATTATCCTGTaGAGGTTGAGTTTTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: HVFKVHEHKQGLPHIASITIIIL*RLSFHI Trigger: GATATGAAAACTCAACCTGCACAGGATAATTATGGT...GATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CCA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTTCATTTGCATTCTACTaGATATGTTACCCCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLSFAFY*ICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGA...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163348.8 |
||
| CDS-3UTR TCA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCGTGTGGGTTCGCATGTaGATATTTAGATATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHICKSQLRNTSRSIASSVWVRM*IFRYAG Trigger: TCCTGCATATCTAAATATTCACATGCGAACCCACAC...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR GCA 90 bp | GAGTACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTACCATAATTATCCTGTaGAGGTTGAGTTTTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: EYHHVFKVHEHKQGLPHITIIIL*RLSFHI Trigger: GATATGAAAACTCAACCTGCACAGGATAATTATGGT...AATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR GCA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCGCATGCAACTTCAGATaGCCATTAAGGTTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHICKSQLRNTSRSIASSACNFR*PLRLEE Trigger: TTCTTCCAACCTTAATGGGCATCTGAAGTTGCATGC...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTGAACATTTGGTTTCGAGCTGTAATTTCCATTCTGGGAAAACTATCTTCCAACATCATTTCTGCTaGTATTTTTCGTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NAEHLVSSCNFHSGKTIFQHHFC*YFSFLK Trigger: CTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTG...GAAGATAGTTTTCCCAGAATGGAAATTACAGCTCGAAACCAAATGTTCAGCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| CDS-3UTR GCA 90 bp | CAGGACAGACAGAAAGACGGGGCTACATTGAGAAACCTTATCTTAAAACAAATAAACCAACATCATTTCTaGTGCTATTTTTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDRQKDGATLRNLILKQINQHHF*CYFSFL Trigger: CAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTT...TATTTGTTTTAAGATAAGGTTTCTCAATGTAGCCCCGTCTTTCTGTCTGTCCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000168095.8 |
||
| CDS-3UTR GCA 90 bp | AACGCTGAACATTTGGTTTCGAGCTGTAATTTCCATTCTGGGAAAACTATCTTCAACCAACATCATTTCTaGTGCTATTTTTCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAEHLVSSCNFHSGKTIFNQHHF*CYFSFL Trigger: CAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTT...GAAGATAGTTTTCCCAGAATGGAAATTACAGCTCGAAACCAAATGTTCAGCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163427.8 ENSMUST00000168095.8 |
||
| CDS-3UTR GCA 90 bp | AACCACATATGTAAATCACAGCTTAGAAACACAAGCAGATCAATAGCAAGTTCCCTGTTGATTCCTGTCTaGATTTGCATTCTACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NHICKSQLRNTSRSIASSLLIPV*ICILLD Trigger: ATCCAGTAGAATGCAAATGCAGACAGGAATCAACAG...GGAACTTGCTATTGATCTGCTTGTGTTTCTAAGCTGTGATTTACATATGTGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTTGAGTCAGTCTTCCTCTCTGCCATGCTACATAAACTAGCTGGCCTGCAAGAAGAAGTCTCCATATaGCGTCCCATCACAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVESVFLSAMLHKLAGLQEEVSI*RPITEL Trigger: GAGCTCTGTGATGGGACGCAATATGGAGACTTCTTC...TTGCAGGCCAGCTAGTTTATGTAGCATGGCAGAGAGGAAGACTGACTCAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATGTGAGTTCTTATATGTaGGATCAGTCGAGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGTEAWLSESTAGACNYVSSYM*DQSRGR Trigger: ACGTCCTCTCGACTGATCCAACATATAAGAACTCAC...ATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS GCA 90 bp | TGCGTCCCATCACAGAGCTCCCTTCCTCTGTTGATTCCTGTCATTTaGATTCTACTGGATATGTTACCCCTCAGAAATTCCTGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVPSQSSLPLLIPVI*ILLDMLPLRNSCWN Trigger: GTTCCAGCAGGAATTTCTGAGGGGTAACATATCCAGTAGAATGCAAATGACAGGAATCAACAGAGGAAGGGAGCTCTGTGATGGGACGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163348.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGAACTGAAGCCTGGCTCTCTGAAAGTACAGCAGGTGCCTGTAACTATTTCGTGAGTTCTTATATGTaGGATCAGTCGAGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: LGTEAWLSESTAGACNYFVSSYM*DQSRGR Trigger: ACGTCCTCTCGACTGATCCAACATATAAGAACTCAC...GAAATAGTTACAGGCACCTGCTGTACTTTCAGAGAGCCAGGCTTCAGTTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTGCAGAAGGCTGTCTGAAGTTTCCATGGTCTTCTCTGTGTGCATCCTGCAGATGCCCATTAAGGTaGGAAGAAATAGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFAEGCLKFPWSSLCASCRCPLR*EEIAKA Trigger: AGCCTTTGCTATTTCTTCCAACCTTAATGGGCATCT...GCAGGATGCACACAGAGAAGACCATGGAAACTTCAGACAGCCTTCTGCAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS TCA 90 bp | AGAAGTCTCCATATTGCGTCCCATCACAGAGCTCCCTTCCTCTGTTaGTTCCTGTCATTTGCATTCTACTGGATATGTTACCCCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSLHIASHHRAPFLC*FLSFAFYWICYPSE Trigger: TTCTGAGGGGTAACATATCCAGTAGAATGCAAATGACAGGAATCAACAGAGGAAGGGAGCTCTGTGATGGGACGCAATATGGAGACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163348.8 |
||
| CDS-3UTR CAA 90 bp | CATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCGTGAGTTCTTATATGTaGGATCAGTCGAGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: HHVFKVHEHKQGLPHIASVSSYM*DQSRGR Trigger: ACGTCCTCTCGACTGATCCAACATATAAGAACTCAC...GGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | AACACAAGCAGATCAATAGCAAGTTCCAGGACAGACAGAAAGACGGGGCTACATGATTCCTGTCTGCATTaGCATTCTACTGGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: NTSRSIASSRTDRKTGLHDSCLH*HSTGYV Trigger: AACATATCCAGTAGAATGCAAATGCAGACAGGAATC...ATGTAGCCCCGTCTTTCTGTCTGTCCTGGAACTTGCTATTGATCTGCTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115562.9 ENSMUST00000167457.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAGTGAGTTCTTATATGTaGGATCAGTCGAGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: MSSKYMSTNKGFLTLLPSVSSYM*DQSRGR Trigger: ACGTCCTCTCGACTGATCCAACATATAAGAACTCAC...TGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTGTGAGTTCTTATATGTaGGATCAGTCGAGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: KYMSTNKGFLTLLPSIRLVSSYM*DQSRGR Trigger: ACGTCCTCTCGACTGATCCAACATATAAGAACTCAC...AAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | TACATGAGCACAAACAAGGGCTTCCTCACATTGCTTCCATCAATTAGGCTTCTCAGATGCCCATTAAGGTaGGAAGAAATAGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YMSTNKGFLTLLPSIRLLRCPLR*EEIAKA Trigger: AGCCTTTGCTATTTCTTCCAACCTTAATGGGCATCT...GAGAAGCCTAATTGATGGAAGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTAAGATGCCCATTAAGGTaGGAAGAAATAGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GQIQAVRHFHQVLLPTELRCPLR*EEIAKA Trigger: AGCCTTTGCTATTTCTTCCAACCTTAATGGGCATCT...TAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | TACCATCATGTCTTCAAAGTACATGAGCACAAACAAGGGCTTCCTCACATTGCTAGCTCCCTTCCTCTGTaGATTCCTGTCATTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: YHHVFKVHEHKQGLPHIASSLPL*IPVICI Trigger: AATGCAAATGACAGGAATCAACAGAGGAAGGGAGCT...AGCAATGTGAGGAAGCCCTTGTTTGTGCTCATGTACTTTGAAGACATGATGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163348.8 |
||
| CDS-3UTR CAA 90 bp | CATGGAGTATTTGTGTTGCTCAGTATGGCAACACAGCACTGCTCTAAGCTAAGTGATTCCTGTCTGCATTaGCATTCTACTGGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVFVLLSMATQHCSKLSDSCLH*HSTGYV Trigger: AACATATCCAGTAGAATGCAAATGCAGACAGGAATC...ACTTAGCTTAGAGCAGTGCTGTGTTGCCATACTGAGCAACACAAATACTCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATAGATGCCCATTAAGGTaGGAAGAAATAGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRFKLSDISIKCFYPLSYRCPLR*EEIAKA Trigger: AGCCTTTGCTATTTCTTCCAACCTTAATGGGCATCT...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | ATTTACGTGAGTGTGGGTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTGATTCCTGTCTGCATTaGCATTCTACTGGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: IYVSVGQIQAVRHFHQVLDSCLH*HSTGYV Trigger: AACATATCCAGTAGAATGCAAATGCAGACAGGAATC...AAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGACCCACACTCACGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGATTCAAGCTGTCAGACATTTCCATCAAGTGCTTTTACCCACTGAGCTATGATTCCTGTCTGCATTaGCATTCTACTGGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRFKLSDISIKCFYPLSYDSCLH*HSTGYV Trigger: AACATATCCAGTAGAATGCAAATGCAGACAGGAATC...ATAGCTCAGTGGGTAAAAGCACTTGATGGAAATGTCTGACAGCTTGAATCTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000167457.8 ENSMUST00000169558.8 |
||
| CDS TCA 72 bp | TCAACCAACATCATTTCTGCTGCTATTTTTCGTTCCTaGAGGCAGCCTGAGTCCTCTGAAGGACCATGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: STNIISAAIFRS*RQPESSEGPWD Trigger: GTCCCATGGTCCTTCAGAGGACTCAGGCTGCCTTCAGGAACGAAAAATAGCAGCAGAAATGATGTTGGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENSMUST00000080386.13 ENSMUST00000115562.9 ENSMUST00000163348.8 ENSMUST00000163427.8 ENSMUST00000164799.8 ENSMUST00000164825.8 ENSMUST00000166005.8 ENSMUST00000168095.8 ENSMUST00000169269.8 ENSMUST00000169558.8 |
||
| CDS GCA 72 bp | CCTCAAAGCTCACTAACTCCTGAAATATTGCAGGCATaGTGGTTTGAGCCAAATAAGAACTCTGATCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQSSLTPEILQA*WFEPNKNSDHL Trigger: CAGATGATCAGAGTTCTTATTTGGCTCAAACCAGCATGCCTGCAATATTTCAGGAGTTAGTGAGCTTTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164799.8 |
||
| CDS CCA 72 bp | CAAAGCTCACTAACTCCTGAAATATTGCAGGCATGCTaGTTTGAGCCAAATAAGAACTCTGATCATCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QSSLTPEILQAC*FEPNKNSDHLS Trigger: TGACAGATGATCAGAGTTCTTATTTGGCTCAAACCAGCATGCCTGCAATATTTCAGGAGTTAGTGAGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164799.8 |
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