Pregenerated sensors for ZFP422 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059878Ensembl transcript IDs: ENSMUST00000057540.6, ENSMUST00000079749.6, ENSMUST00000112880.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGTGGAGGGGAACTCTCTGGGATAAAAGGAGAACCAGGAGGAGGTaGGCGAGGGTAACGGTGGGTGTGAGCAAAGCACATCATACAGAT | + |
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Preference number: 1 (lower is better) Translates to: KWRGTLWDKRRTRRR*ARVTVGVSKAHHTD Trigger: ATCTGTATGATGTGCTTTGCTCACACCCACCGTTACCCTCGCCCACCTCCTCCTGGTTCTCCTTTTATCCCAGAGAGTTCCCCTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 90 bp | GTCCCCTCCTCCTCTCCAAGAAGCTATCTCACACAAATCAGAGACTaGCACATGCTCACTAGGGCCTCATGGATGCATCCCTGCTATAGA | + |
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Preference number: 1 (lower is better) Translates to: VPSSSPRSYLTQIRD*HMLTRASWMHPCYR Trigger: TCTATAGCAGGGATGCATCCATGAGGCCCTAGTGAGCATGTGTCAGTCTCTGATTTGTGTGAGATAGCTTCTTGGAGAGGAGGAGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR GCA 90 bp | TCACACAAATCAGAGACTGACACATGCTCACTAGGGCCTCATGGATaGATCCCTGCTATAGAGATTTGGCTACAACAGGATGTCAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SHKSETDTCSLGPHG*IPAIEIWLQQDVKD Trigger: ATCCTTGACATCCTGTTGTAGCCAAATCTCTATAGCAGGGATGCATCCATGAGGCCCTAGTGAGCATGTGTCAGTCTCTGATTTGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR CCA 90 bp | ACATGCTCACTAGGGCCTCATGGATGCATCCCTGCTATAGAGATTTaGCTACAACAGGATGTCAAGGATCAAGTCTTTCATAACAGATGT | + |
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Preference number: 1 (lower is better) Translates to: TCSLGPHGCIPAIEI*LQQDVKDQVFHNRC Trigger: ACATCTGTTATGAAAGACTTGATCCTTGACATCCTGTTGTAGCCAAATCTCTATAGCAGGGATGCATCCATGAGGCCCTAGTGAGCATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR TCA 90 bp | GAGACGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTaGACTAGAGAACATTACAGTAGGCACAGGAAAGTGGATGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ETKKKSHSPVAWRMD*TREHYSRHRKVDAE Trigger: TTCTGCATCCACTTTCCTGTGCCTACTGTAATGTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCGTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 90 bp | CTGGTAACAGAGTTTATTCATGTAGACGCTGTGAGGCCACTGGCATaGTTCAACACAAACCATTCCCATTTCAAGAAAGCAAGTGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LVTEFIHVDAVRPLA*FNTNHSHFKKASDR Trigger: TCTGTCACTTGCTTTCTTGAAATGGGAATGGTTTGTGTTGAATCATGCCAGTGGCCTCACAGCGTCTACATGAATAAACTCTGTTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR CCA 90 bp | ACTGTGAGACGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATaGATTGAACTAGAGAACATTACAGTAGGCACAGGAAAGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: TVRRKRKATVLLLGE*IELENITVGTGKWM Trigger: CATCCACTTTCCTGTGCCTACTGTAATGTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCGTCTCACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR GCA 90 bp | GGCTACAACAGGATGTCAAGGATCAAGTCTTTCATAACAGATGTCTaGAATAGCCTTATAAGACACTTTGGATACTCTGTTGGATGTAAC | + |
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Preference number: 1 (lower is better) Translates to: GYNRMSRIKSFITDV*NSLIRHFGYSVGCN Trigger: GTTACATCCAACAGAGTATCCAAAGTGTCTTATAAGGCTATTGCAGACATCTGTTATGAAAGACTTGATCCTTGACATCCTGTTGTAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGTACACTGGTCACCATAGAAGCCTCCCACAGATCAGTGTCTTTGATGCCGGGCAACATTTTAAGTaGAGGGGAACTCTCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TKYTGHHRSLPQISVFDAGQHFK*RGTLWD Trigger: ATCCCAGAGAGTTCCCCTCCACTTAAAATGTTGCCC...GGCATCAAAGACACTGATCTGTGGGAGGCTTCTATGGTGACCAGTGTACTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAACAAGTGACAGAGCAGTaGCAGCATCAGCATCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GGGGCRREVKFRSEKNHKQVTEQ*QHQHLK Trigger: CTTGAGATGCTGATGCTGTCACTGCTCTGTCACTTG...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAAGTGAGGCCACTGGCATaGTTCAACACAAACCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: GGGGCRREVKFRSEKNHKVRPLA*FNTNHS Trigger: GGAATGGTTTGTGTTGAATCATGCCAGTGGCCTCAC...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR CAA 90 bp | CAAAGTACACTGGTCACCATAGAAGCCTCCCACAGATCAGTGTCTTaGATGCCTGTCAGCCTCCAGGTTTTCAGAACACATACAAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: QSTLVTIEASHRSVS*MPVSLQVFRTHTKQ Trigger: TTGTTTTGTATGTGTTCTGAAAACCTGGAGGCTGACAGGCATCAAAGACACTGATCTGTGGGAGGCTTCTATGGTGACCAGTGTACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR CCA 90 bp | CGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGAACTGGAGGGGAACTCTCTaGGATAAAAGGAGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: RKRKATVLLLGEWIELENWRGTL*DKRRTR Trigger: CCTGGTTCTCCTTTTATCCCAGAGAGTTCCCCTCCA...GTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTTGGAGGGGAACTCTCTaGGATAAAAGGAGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SRRKETNKSGLSLKPSNTWRGTL*DKRRTR Trigger: CCTGGTTCTCCTTTTATCCCAGAGAGTTCCCCTCCA...AGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACGGTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGGTCGATCCTAGAATCTaGAAACCCATTCCTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VTVGVSKAHHTDTSYTLEVDPRI*KPIPSF Trigger: GAAAGAAGGAATGGGTTTTCAGATTCTAGGATCGAC...CTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCACCGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGTACACTGGTCACCATAGAAGCCTCCCACAGATCAGTGTCTTTGATGCCCACTACAATAGACTGTaGGACGAAAAAGAAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TKYTGHHRSLPQISVFDAHYNRL*DEKEKP Trigger: TGGCTTTTCTTTTTCGTCTCACAGTCTATTGTAGTG...GGCATCAAAGACACTGATCTGTGGGAGGCTTCTATGGTGACCAGTGTACTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTAAGCCACAGTCCTGTTaGTTGGAGAATGGATTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: IQSSVYDIVVLQPEVSRGKPQSC*LENGLN Trigger: GTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTT...ACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTGTCGATCCTAGAATCTaGAAACCCATTCCTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSVDPRI*KPIPSF Trigger: GAAAGAAGGAATGGGTTTTCAGATTCTAGGATCGAC...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAAGAGGCACAGGAAAGTGGATaGAGAAAAATAACCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: GGGCRREVKFRSEKNHKEAQESG*RKITKH Trigger: GTGTTTGGTTATTTTTCTGCATCCACTTTCCTGTGC...CTCTTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTACAATAGGGCAACATTTTAAGTaGAGGGGAACTCTCTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RKETNKSGLSLKPSNTTIGQHFK*RGTLWD Trigger: ATCCCAGAGAGTTCCCCTCCACTTAAAATGTTGCCC...TATTGTAGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAAAAGGCACGCCAGTGGATCATaGAAACATGATTCTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VGVSKAHHTDTSYTLEKRHASGS*KHDSFY Trigger: ATAAAAAGAATCATGTTTTCATGATCCACTGGCGTG...CCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTGCACAGGAAAGTGGATaGAGAAAAATAACCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSAQESG*RKITKH Trigger: GTGTTTGGTTATTTTTCTGCATCCACTTTCCTGTGC...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCACATGGAGACCTTCTCACCCTTTACTAACATAGCAGAAGGAAAGAAACAAGCACAGGAAAGTGGATaGAGAAAAATAACCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: SHMETFSPFTNIAEGKKQAQESG*RKITKH Trigger: GTGTTTGGTTATTTTTCTGCATCCACTTTCCTGTGC...TTGTTTCTTTCCTTCTGCTATGTTAGTAAAGGGTGAGAAGGTCTCCATGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | CGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGAACCACGCCAGTGGATCATaGAAACATGATTCTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: RKRKATVLLLGEWIELENHASGS*KHDSFY Trigger: ATAAAAAGAATCATGTTTTCATGATCCACTGGCGTG...GTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTATACCTCATACACATTaGAGAAAAGGAAGCTCATTA | + |
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Preference number: 2 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSIPHTH*RKGSSL Trigger: TAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTAT...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCACATCATACAGATACCTCATACACATTGGAGAAAAGGAAGCTCATTACACGCCAGTGGATCATaGAAACATGATTCTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: AKHIIQIPHTHWRKGSSLHASGS*KHDSFY Trigger: ATAAAAAGAATCATGTTTTCATGATCCACTGGCGTG...TAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR CCA 72 bp | GCCACACGCTATGGCTCTCCATTAAAACGTGGGTGGTaGGGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ATRYGSPLKRGW*GGGGCRREVKF Trigger: GAACTTTACCTCCCTCCTACAACCACCACCACCCCACCACCCACGTTTTAATGGAGAGCCATAGCGTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTCTaGGTTCGAGGCCAGCTTGTTCTACAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALGRQRQVDF*VRGQLVLQSEF Trigger: GAACTCACTTTGTAGAACAAGCTGGCCTCGAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR TCA 72 bp | TCCTCTCCAAGAAGCTATCTCACACAAATCAGAGACTaGCACATGCTCACTAGGGCCTCATGGATGCATCCC | + |
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Preference number: 3 (lower is better) Translates to: SSPRSYLTQIRD*HMLTRASWMHP Trigger: GGGATGCATCCATGAGGCCCTAGTGAGCATGTGTCAGTCTCTGATTTGTGTGAGATAGCTTCTTGGAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR TCA 72 bp | ACCATTCCCATTTCAAGAAAGCAAGTGACAGAGCAGTaGCAGCATCAGCATCTCAAGAAGTGCGGTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TIPISRKQVTEQ*QHQHLKKCGQE Trigger: CTCCTGACCGCACTTCTTGAGATGCTGATGCTGTCACTGCTCTGTCACTTGCTTTCTTGAAATGGGAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGTACACTGGTCACCATAGAAGCCTCCCACAGATCAGTGTCTTTGATGCCAAAGCCACAGTCCTGTaGCTTGGAGAATGGATTGAA | + |
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Preference number: 3 (lower is better) Translates to: TKYTGHHRSLPQISVFDAKATVL*LGEWIE Trigger: TTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTT...GGCATCAAAGACACTGATCTGTGGGAGGCTTCTATGGTGACCAGTGTACTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR CCA 72 bp | CTAGGGCCTCATGGATGCATCCCTGCTATAGAGATTTaGCTACAACAGGATGTCAAGGATCAAGTCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: LGPHGCIPAIEI*LQQDVKDQVFH Trigger: ATGAAAGACTTGATCCTTGACATCCTGTTGTAGCCAAATCTCTATAGCAGGGATGCATCCATGAGGCCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR CAA 90 bp | ATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTAAAGCCACAGTCCTGTaGCTTGGAGAATGGATTGAA | + |
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Preference number: 3 (lower is better) Translates to: IQSSVYDIVVLQPEVSRGKATVL*LGEWIE Trigger: TTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTT...ACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 72 bp | AAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTaGACTAGAGAACATTACAGTAGGCACAGGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: KKSHSPVAWRMD*TREHYSRHRKV Trigger: CACTTTCCTGTGCCTACTGTAATGTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 72 bp | GTTGTCGCTAAAGCCTTCAAACACTACAATAGACTGTaGGACGAAAAAGAAAAGCCACAGTCCTGTTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VVAKAFKHYNRL*DEKEKPQSCCL Trigger: CAAGCAACAGGACTGTGGCTTTTCTTTTTCGTCTCACAGTCTATTGTAGTGTTTGAAGGCTTTAGCGACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 72 bp | GAGTTTATTCATGTAGACGCTGTGAGGCCACTGGCATaGTTCAACACAAACCATTCCCATTTCAAGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: EFIHVDAVRPLA*FNTNHSHFKKA Trigger: TGCTTTCTTGAAATGGGAATGGTTTGTGTTGAATCATGCCAGTGGCCTCACAGCGTCTACATGAATAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR TCA 72 bp | GTTTTAGATAGTCGGTGGTATTCAAAGCTCAGTCTATaGCATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: VLDSRWYSKLSL*HCSSSAGSKSR Trigger: CCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACCGACTATCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR CCA 72 bp | CGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATaGATTGAACTAGAGAACATTACAGTAGGCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: RKRKATVLLLGE*IELENITVGTG Trigger: TCCTGTGCCTACTGTAATGTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAACTGCAGTTTCTCACTTaGGATTCCTTTACATCTCTA | + |
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Preference number: 3 (lower is better) Translates to: GGGGCRREVKFRSEKNHKLQFLT*DSFTSL Trigger: TAGAGATGTAAAGGAATCCAAAGTGAGAAACTGCAG...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| 3UTR-3UTR CAA 90 bp | AGCCACATGGAGACCTTCTCACCCTTTACTAACATAGCAGAAGGAAAGAAACAAGATACCTCATACACATaGGAGAAAAGGAAGCTCATT | + |
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Preference number: 3 (lower is better) Translates to: SHMETFSPFTNIAEGKKQDTSYT*EKRKLI Trigger: AATGAGCTTCCTTTTCTCCAATGTGTATGAGGTATC...TTGTTTCTTTCCTTCTGCTATGTTAGTAAAGGGTGAGAAGGTCTCCATGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| 3UTR GCA 72 bp | AGGATGTCAAGGATCAAGTCTTTCATAACAGATGTCTaGAATAGCCTTATAAGACACTTTGGATACTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: RMSRIKSFITDV*NSLIRHFGYSV Trigger: AACAGAGTATCCAAAGTGTCTTATAAGGCTATTGCAGACATCTGTTATGAAAGACTTGATCCTTGACATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
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| CDS-3UTR GCA 90 bp | GTCAGGAGCAGGAGGTCTGCAGTTTCTCACTTTGGATTCCTTTACATCTCTAAGCCGCCTTCCTCCCTTTaGCCCTTTTCCAGGACACCG | + |
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Preference number: 4 (lower is better) Translates to: VRSRRSAVSHFGFLYISKPPSSL*PFSRTP Trigger: CGGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGG...CTTAGAGATGTAAAGGAATCCAAAGTGAGAAACTGCAGACCTCCTGCTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR GCA 90 bp | GTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAAAAGGCCGCCTTCCTCCCTTTaGCCCTTTTCCAGGACACCG | + |
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Preference number: 4 (lower is better) Translates to: VGVSKAHHTDTSYTLEKRPPSSL*PFSRTP Trigger: CGGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGG...CCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR GCA 90 bp | TTAAAGGAAATGAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTGTGTGGATCCGCCGGTaGTGGATGAGGTTAGAACTC | + |
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Preference number: 4 (lower is better) Translates to: LKEMRAARLRVSAHCHETVWIRR*WMRLEL Trigger: GAGTTCTAACCTCATCCAGCACCGGCGGATCCACAC...AGTTTCATGACAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTCATTTCCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR GCA 90 bp | GTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAAAAGGTGCACCTTCATGTGCTaGCTCAGATGGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVSKAHHTDTSYTLEKRCTFMC*LRWELW Trigger: CCAGAGCTCCCATCTGAGGCAGCACATGAAGGTGCA...CCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTCCTGGTAACATGCACCTTCATGTGCTaGCTCAGATGGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYDIVVLQPEVSRGFLVTCTFMC*LRWELW Trigger: CCAGAGCTCCCATCTGAGGCAGCACATGAAGGTGCA...TGTTACCAGGAAACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CCA 90 bp | GTAACGGTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAGGCTTTTCCTTGGCTaGCGCTTCGAGAAATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVGVSKAHHTDTSYTLERLFLG*RFEKYP Trigger: GGGGTATTTCTCGAAGCGCCAGCCAAGGAAAAGCCT...CTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCACCGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR TCA 90 bp | GTAACGGTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAAGAGCGTGGAGCTCTaGCTGAAACTCTTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTVGVSKAHHTDTSYTLEKSVEL*LKLLEH Trigger: ATGCTCCAAGAGTTTCAGTCAGAGCTCCACGCTCTT...CTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCACCGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGAGCAGGAGGTCTGCAGTTTCTCACTTTGGATTCCTTTACATCTCTAAGAAGAGCGTGGAGCTCTaGCTGAAACTCTTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRRSAVSHFGFLYISKKSVEL*LKLLEH Trigger: ATGCTCCAAGAGTTTCAGTCAGAGCTCCACGCTCTT...CTTAGAGATGTAAAGGAATCCAAAGTGAGAAACTGCAGACCTCCTGCTCCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTGTGTGGATCCGCCGGTaGTGGATGAGGTTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRRKETNKSGLSLKPSNTVWIRR*WMRLEL Trigger: GAGTTCTAACCTCATCCAGCACCGGCGGATCCACAC...AGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | CGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGAACTGCACCTTCATGTGCTaGCTCAGATGGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKRKATVLLLGEWIELENCTFMC*LRWELW Trigger: CCAGAGCTCCCATCTGAGGCAGCACATGAAGGTGCA...GTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGAAATGAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTTTGTGCACCTTCATGTaGTGCCTCAGATGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKEMRAARLRVSAHCHETLCTFM*CLRWEL Trigger: GAGCTCCCATCTGAGGCAGCACATGAAGGTGCACAA...AGTTTCATGACAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTCATTTCCTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTCCTGGTAACATTGTGCACCTTCATGTaGTGCCTCAGATGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VYDIVVLQPEVSRGFLVTLCTFM*CLRWEL Trigger: GAGCTCCCATCTGAGGCAGCACATGAAGGTGCACAA...TGTTACCAGGAAACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAAAGGCTTTTCCTTGGCTaGCGCTTCGAGAAATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGCRREVKFRSEKNHKRLFLG*RFEKYP Trigger: GGGGTATTTCTCGAAGCGCCAGCCAAGGAAAAGCCT...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGAAATGAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTAAGAGCGTGGAGCTCTaGCTGAAACTCTTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKEMRAARLRVSAHCHETKSVEL*LKLLEH Trigger: ATGCTCCAAGAGTTTCAGTCAGAGCTCCACGCTCTT...AGTTTCATGACAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTCATTTCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGAAAAGGGGGCTGTCTTGCGCTTaGTCTCATAGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGVSKAHHTDTSYTLEKRGLSCA*SHRLFL Trigger: AAGGAAAAGCCTATGAGAGCAAGCGCAAGACAGCCC...CCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTTTGTGCACCTTCATGTaGTGCCTCAGATGGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSLCTFM*CLRWEL Trigger: GAGCTCCCATCTGAGGCAGCACATGAAGGTGCACAA...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CCA 90 bp | AGCCACATGGAGACCTTCTCACCCTTTACTAACATAGCAGAAGGAAAGAAACAAAGGCTTTTCCTTGGCTaGCGCTTCGAGAAATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHMETFSPFTNIAEGKKQRLFLG*RFEKYP Trigger: GGGGTATTTCTCGAAGCGCCAGCCAAGGAAAAGCCT...TTGTTTCTTTCCTTCTGCTATGTTAGTAAAGGGTGAGAAGGTCTCCATGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTGATTGGAGCTCTGCTTaGATCTCTCTCCACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSDWSSA*ISLHTR Trigger: ACGAGTGTGGAGAGAGATTCAAGCAGAGCTCCAATC...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAAGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTGATTGGAGCTCTGCTTaGATCTCTCTCCACACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRRKETNKSGLSLKPSNTDWSSA*ISLHTR Trigger: ACGAGTGTGGAGAGAGATTCAAGCAGAGCTCCAATC...AGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTGGGCTGTCTTGCGCTTaGTCTCATAGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGIQSSVYDIVVLQPEVSGLSCA*SHRLFL Trigger: AAGGAAAAGCCTATGAGAGCAAGCGCAAGACAGCCC...ACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAATACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTCCTGGTAACAGGCTTCTTTTCTTTGTaGACCTTCATGTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VYDIVVLQPEVSRGFLVTGFFSL*TFMCCL Trigger: GAGGCAGCACATGAAGGTGCACAAAGAAAAGAAGCC...TGTTACCAGGAAACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGGGAAGCGATTTCAACTGAGGCTAAGAATATTAAATTCTTACCAAACTCCGCCTTCCTCCCTTTaGCCCTTTTCCAGGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NGGKRFQLRLRILNSYQTPPSSL*PFSRTP Trigger: CGGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGG...AGTTTGGTAAGAATTTAATATTCTTAGCCTCAGTTGAAATCGCTTCCCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTCCTGGTAACAATGAGATTGGAGCTCTaGTTGAATCTCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VYDIVVLQPEVSRGFLVTMRLEL*LNLSPH Trigger: GTGTGGAGAGAGATTCAAGCAGAGCTCCAATCTCAT...TGTTACCAGGAAACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | AGCCACATGGAGACCTTCTCACCCTTTACTAACATAGCAGAAGGAAAGAAACAAGGCTTCTTTTCTTTGTaGACCTTCATGTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHMETFSPFTNIAEGKKQGFFSL*TFMCCL Trigger: GAGGCAGCACATGAAGGTGCACAAAGAAAAGAAGCC...TTGTTTCTTTCCTTCTGCTATGTTAGTAAAGGGTGAGAAGGTCTCCATGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | AGACGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGTCACCCTGGCATTTTTaGCCCTCTTATGTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRKRKATVLLLGEWIELESPWHF*PSYVAS Trigger: AGAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGA...CTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | CGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGAACTCACCCTGGCATTTTTaGCCCTCTTATGTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKATVLLLGEWIELENSPWHF*PSYVAS Trigger: AGAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGA...GTTCTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGAGCAGGAGGTCTGCAGTTTCTCACTTTGGATTCCTTTACATCTCTAAGTTTGCCCCTCTTATGTaGCTTCTTTTCTTTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRSRRSAVSHFGFLYISKFAPLM*LLFFVH Trigger: GTGCACAAAGAAAAGAAGCCACATAAGAGGGGCAAA...CTTAGAGATGTAAAGGAATCCAAAGTGAGAAACTGCAGACCTCCTGCTCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | ATACCTCATACACATTGGAGAAAAGGAAGCTCATTACTTCGTACAATATACACTGTGTGGATCCGCCGGTaGTGGATGAGGTTAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: IPHTHWRKGSSLLRTIYTVWIRR*WMRLEL Trigger: GAGTTCTAACCTCATCCAGCACCGGCGGATCCACAC...AGTGTATATTGTACGAAGTAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTATGAGATTGGAGCTCTaGTTGAATCTCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IQSSVYDIVVLQPEVSRGMRLEL*LNLSPH Trigger: GTGTGGAGAGAGATTCAAGCAGAGCTCCAATCTCAT...ACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAATTTGCCCCTCTTATGTaGCTTCTTTTCTTTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGCRREVKFRSEKNHKFAPLM*LLFFVH Trigger: GTGCACAAAGAAAAGAAGCCACATAAGAGGGGCAAA...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTACAATAGGCTTCTTTTCTTTGTaGACCTTCATGTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKETNKSGLSLKPSNTTIGFFSL*TFMCCL Trigger: GAGGCAGCACATGAAGGTGCACAAAGAAAAGAAGCC...TATTGTAGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGAAACAAACAAAAGCGGGTTGTCGCTAAAGCCTTCAAACACTACAATAATGAGATTGGAGCTCTaGTTGAATCTCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKETNKSGLSLKPSNTTIMRLEL*LNLSPH Trigger: GTGTGGAGAGAGATTCAAGCAGAGCTCCAATCTCAT...TATTGTAGTGTTTGAAGGCTTTAGCGACAACCCGCTTTTGTTTGTTTCTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR GCA 90 bp | ATACCTCATACACATTGGAGAAAAGGAAGCTCATTACTTCGTACAATATACACTTCACCCTGGCATTTTTaGCCCTCTTATGTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPHTHWRKGSSLLRTIYTSPWHF*PSYVAS Trigger: AGAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGA...AGTGTATATTGTACGAAGTAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| 3UTR CAA 72 bp | GTGAGCAAAGCACATCATACAGATACCTCATACACATaGGAGAAAAGGAAGCTCATTACTTCGTACAATATA | + |
|
Preference number: 4 (lower is better) Translates to: VSKAHHTDTSYT*EKRKLITSYNI Trigger: TATATTGTACGAAGTAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS GCA 90 bp | TGGCTCCCTTTACCTGGCGGATCCCAGCCACCGCCTTCCTCCCTTTaGCCCTTTTCCAGGACACCGGGTGAGTTTTCACCCTGGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: WLPLPGGSQPPPSSL*PFSRTPGEFSPWHF Trigger: AAAATGCCAGGGTGAAAACTCACCCGGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGTGGCTGGGATCCGCCAGGTAAAGGGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | GTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTTCCTGGTAACAACCGCCTTCCTCCCTTaGCCCCTTTTCCAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: VYDIVVLQPEVSRGFLVTTAFLP*PLFQDT Trigger: GGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGT...TGTTACCAGGAAACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | GTAACGGTGGGTGTGAGCAAAGCACATCATACAGATACCTCATACACATTGGAGTGGTGCTGGATGAGATaGGAGCTCTGCTTGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTVGVSKAHHTDTSYTLEWCWMR*ELCLNL Trigger: GAGATTCAAGCAGAGCTCCAATCTCATCCAGCACCA...CTCCAATGTGTATGAGGTATCTGTATGATGTGCTTTGCTCACACCCACCGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGAAATGAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTAGATTGGAGCTCTGCTaGAATCTCTCTCCACACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LKEMRAARLRVSAHCHETRLELC*NLSPHS Trigger: CGAGTGTGGAGAGAGATTCAAGCAGAGCTCCAATCT...AGTTTCATGACAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTCATTTCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAAGAGTGGTGCTGGATGAGATaGGAGCTCTGCTTGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGGCRREVKFRSEKNHKEWCWMR*ELCLNL Trigger: GAGATTCAAGCAGAGCTCCAATCTCATCCAGCACCA...CTCTTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGAAATGAGGGCAGCTAGACTCAGAGTTTCAGCGCACTGTCATGAAACTTTCACCCTGGCATTTTaGCCCCTCTTATGTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKEMRAARLRVSAHCHETFTLAF*PLLCGF Trigger: GAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGAA...AGTTTCATGACAGTGCGCTGAAACTCTGAGTCTAGCTGCCCTCATTTCCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTAGATTGGAGCTCTGCTaGAATCTCTCTCCACACTCG | + |
|
Preference number: 5 (lower is better) Translates to: IQSSVYDIVVLQPEVSRGRLELC*NLSPHS Trigger: CGAGTGTGGAGAGAGATTCAAGCAGAGCTCCAATCT...ACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTGGTTGTAGGAGGGAGGTAAAGTTCAGATCTGAGAAAAATCACAAATGTGGCTTCTTTTCTTaGTGCACCTTCATGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGCRREVKFRSEKNHKCGFFS*CTFMCC Trigger: GCAGCACATGAAGGTGCACAAAGAAAAGAAGCCACA...TTTGTGATTTTTCTCAGATCTGAACTTTACCTCCCTCCTACAACCACCACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079749.6 |
||
| CDS-3UTR CAA 90 bp | AGACGAAAAAGAAAAGCCACAGTCCTGTTGCTTGGAGAATGGATTGAACTAGAGTTCACCCTGGCATTTTaGCCCCTCTTATGTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRKRKATVLLLGEWIELEFTLAF*PLLCGF Trigger: GAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGAA...CTCTAGTTCAATCCATTCTCCAAGCAACAGGACTGTGGCTTTTCTTTTTCGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | AGCCACATGGAGACCTTCTCACCCTTTACTAACATAGCAGAAGGAAAGAAACAATTCACCCTGGCATTTTaGCCCCTCTTATGTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHMETFSPFTNIAEGKKQFTLAF*PLLCGF Trigger: GAAGCCACATAAGAGGGGCAAAAATGCCAGGGTGAA...TTGTTTCTTTCCTTCTGCTATGTTAGTAAAGGGTGAGAAGGTCTCCATGTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
||
| CDS-3UTR CAA 90 bp | ATACCTCATACACATTGGAGAAAAGGAAGCTCATTACTTCGTACAATATACACTACCGCCTTCCTCCCTTaGCCCCTTTTCCAGGACACC | + |
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Preference number: 5 (lower is better) Translates to: IPHTHWRKGSSLLRTIYTTAFLP*PLFQDT Trigger: GGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGT...AGTGTATATTGTACGAAGTAATGAGCTTCCTTTTCTCCAATGTGTATGAGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR CAA 90 bp | AATGGAGGGAAGCGATTTCAACTGAGGCTAAGAATATTAAATTCTTACCAAACTACCGCCTTCCTCCCTTaGCCCCTTTTCCAGGACACC | + |
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Preference number: 5 (lower is better) Translates to: NGGKRFQLRLRILNSYQTTAFLP*PLFQDT Trigger: GGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGT...AGTTTGGTAAGAATTTAATATTCTTAGCCTCAGTTGAAATCGCTTCCCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR CAA 90 bp | ATTCAAAGCTCAGTCTATGACATTGTAGTTCTTCAGCCGGAAGTAAGTCGAGGTTGTGGCTTCTTTTCTTaGTGCACCTTCATGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: IQSSVYDIVVLQPEVSRGCGFFS*CTFMCC Trigger: GCAGCACATGAAGGTGCACAAAGAAAAGAAGCCACA...ACCTCGACTTACTTCCGGCTGAAGAACTACAATGTCATAGACTGAGCTTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS-3UTR CAA 90 bp | AATGGAGGGAAGCGATTTCAACTGAGGCTAAGAATATTAAATTCTTACCAAACTAGATTGGAGCTCTGCTaGAATCTCTCTCCACACTCG | + |
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Preference number: 5 (lower is better) Translates to: NGGKRFQLRLRILNSYQTRLELC*NLSPHS Trigger: CGAGTGTGGAGAGAGATTCAAGCAGAGCTCCAATCT...AGTTTGGTAAGAATTTAATATTCTTAGCCTCAGTTGAAATCGCTTCCCTCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS GCA 72 bp | TTACCTGGCGGATCCCAGCCACCGCCTTCCTCCCTTTaGCCCTTTTCCAGGACACCGGGTGAGTTTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LPGGSQPPPSSL*PFSRTPGEFSP Trigger: GGGTGAAAACTCACCCGGTGTCCTGGAAAAGGGGCAAAGGGAGGAAGGCGGTGGCTGGGATCCGCCAGGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS CCA 72 bp | TTCTTTTTAAAAAGGCCGGAAGTGGCTCCCTTTACCTaGCGGATCCCAGCCACCGCCTTCCTCCCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: FFLKRPEVAPFT*RIPATAFLPLP Trigger: GGGCAAAGGGAGGAAGGCGGTGGCTGGGATCCGCCAGGTAAAGGGAGCCACTTCCGGCCTTTTTAAAAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS CAA 72 bp | GCGGGCTGTCTTGCGCTTGCTCTCATAGGCTTTTCCTaGGCTGGCGCTTCGAGAAATACCCCCTTTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: AGCLALALIGFS*AGASRNTPFGL Trigger: AAGCCCAAAGGGGGTATTTCTCGAAGCGCCAGCCAAGGAAAAGCCTATGAGAGCAAGCGCAAGACAGCCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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| CDS CCA 72 bp | CTGTCTTGCGCTTGCTCTCATAGGCTTTTCCTTGGCTaGCGCTTCGAGAAATACCCCCTTTGGGCTTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LSCACSHRLFLG*RFEKYPLWAFL Trigger: TAGGAAAGCCCAAAGGGGGTATTTCTCGAAGCGCCAGCCAAGGAAAAGCCTATGAGAGCAAGCGCAAGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057540.6 ENSMUST00000079749.6 ENSMUST00000112880.8 |
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