Pregenerated sensors for ZFP420 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058402Ensembl transcript IDs: ENSMUST00000057652.7, ENSMUST00000074876.13
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTTGAAGTTAGAGATAGTGAAACATGTAAGTTTTGGGACTCTGTaGCAAATCAGTTCTGTAACCATAGTATTCAATAACCCACTGATA | + |
|
Preference number: 1 (lower is better) Translates to: ELKLEIVKHVSFGTL*QISSVTIVFNNPLI Trigger: TATCAGTGGGTTATTGAATACTATGGTTACAGAACTGATTTGTCACAGAGTCCCAAAACTTACATGTTTCACTATCTCTAACTTCAACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057652.7 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACCTGTGTTCACTGATAATGTATaGCCAGGGAAAGCTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: SQVSHNKCNKGNQLIGPVFTDNV*PGKATL Trigger: TAATGTAGCTTTCCCTGGTCATACATTATCAGTGAA...CACAGGTCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| 3UTR-3UTR TCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGATTCACTGATAATGTATaGCCAGGGAAAGCTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: HESQVSHNKCNKGNQLIGFTDNV*PGKATL Trigger: TAATGTAGCTTTCCCTGGTCATACATTATCAGTGAA...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| 3UTR-3UTR CCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACATGGTTTTCCTATGTaGATTACATCAGCATTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: HESQVSHNKCNKGNQLIGHGFPM*ITSAFL Trigger: TAGAAATGCTGATGTAATCCACATAGGAAAACCATG...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACCTGTGTGGATTCTCTCATGCTaGGTAAGTTCTGAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVSHNKCNKGNQLIGPVWILSC*VSSEPR Trigger: CCGGGGCTCAGAACTTACTCAGCATGAGAGAATCCA...CACAGGTCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACCTGTGGAGCAACAATCCACGTaGAAAGGCCTTCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQVSHNKCNKGNQLIGPVEQQST*KGLPTF Trigger: GAATGTGGGAAGGCCTTTGCACGTGGATTGTTGCTC...CACAGGTCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGAATGGCGGCTGAGTTGTaGGCTTCGAATAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGMAAEL*ASNKGL Trigger: AAGGCCTTTATTCGAAGCTCACAACTCAGCCGCCAT...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGAGTGCAGAGTAAGTTGTaGGTTCTGGGTGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGVQSKL*VLGEGL Trigger: AAGGCCTTCACCCAGAACTCACAACTTACTCTGCAC...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GACCTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACATGGATTCTCTCATGCTaGGTAAGTTCTGAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DLCNVIEKFSLLKTFYITWILSC*VSSEPR Trigger: CCGGGGCTCAGAACTTACTCAGCATGAGAGAATCCA...TGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACCTGTGATGTTGAGTGAGCTGTaGACTGCGGATAAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQVSHNKCNKGNQLIGPVMLSEL*TADKSL Trigger: AAGGCTTTTATCCGCAGTTCACAGCTCACTCAACAT...CACAGGTCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR GCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGAGAGCAACAATCCACGTaGAAAGGCCTTCCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGEQQST*KGLPTF Trigger: GAATGTGGGAAGGCCTTTGCACGTGGATTGTTGCTC...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGACCTGTGGTGTGGATTCTTCTATaGAGAATAAGCTGCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQVSHNKCNKGNQLIGPVVWILL*RISCES Trigger: GCTCTCGCAGCTTATTCTCCATAGAAGAATCCACAC...CACAGGTCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAATGGCGGCTGAGTTGTaGGCTTCGAATAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCNVIEKFSLLKTFYITAMAAEL*ASNKGL Trigger: AAGGCCTTTATTCGAAGCTCACAACTCAGCCGCCAT...TGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAGTGCAGAGTAAGTTGTaGGTTCTGGGTGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCNVIEKFSLLKTFYITAVQSKL*VLGEGL Trigger: AAGGCCTTCACCCAGAACTCACAACTTACTCTGCAC...TGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGAATAAGCTGCGAGAGCTaGGTAAAGACCTTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGISCES*VKTFLH Trigger: GTGTAGGAAGGTCTTTACTCAGCTCTCGCAGCTTAT...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAACGGATTCAATGCTGGGAAAGATGTaGACTCTGGGTAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VIEKFSLLKTFYITATDSMLGKM*TLGKGH Trigger: ATGGCCTTTACCCAGAGTTCACATCTTTCCCAGCAT...TGAATCCGTTGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAGTGCCGAGAAAGATGTaGACTCTGAGTGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCNVIEKFSLLKTFYITAVPRKM*TLSEGL Trigger: AAGGCCTTCACTCAGAGTTCACATCTTTCTCGGCAC...TGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GACCTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGTGCCGAGAAAGATGTaGACTCTGAGTGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLCNVIEKFSLLKTFYITVPRKM*TLSEGL Trigger: AAGGCCTTCACTCAGAGTTCACATCTTTCTCGGCAC...TGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | ACATCAGCATTTCTATTCTCCTACATAAATTCTCAAATGCTGAATTCACAGTCCATAAGCTGCGAGAGCTaGGTAAAGACCTTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: TSAFLFSYINSQMLNSQSISCES*VKTFLH Trigger: GTGTAGGAAGGTCTTTACTCAGCTCTCGCAGCTTAT...GGACTGTGAATTCAGCATTTGAGAATTTATGTAGGAGAATAGAAATGCTGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAACGGATTCAGTTAGTTGTGAGCCATaGCTGAAGGTCTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VIEKFSLLKTFYITATDSVSCEP*LKVFPH Trigger: ATGTGGAAAGACCTTCAGTCATGGCTCACAACTAAC...TGAATCCGTTGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GACCTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAATGCTGGGAAAGATGTaGACTCTGGGTAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLCNVIEKFSLLKTFYITMLGKM*TLGKGH Trigger: ATGGCCTTTACCCAGAGTTCACATCTTTCCCAGCAT...TGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | GTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAACGGATTCAATGTTGAGTGAGCTGTaGACTGCGGATAAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIEKFSLLKTFYITATDSMLSEL*TADKSL Trigger: AAGGCTTTTATCCGCAGTTCACAGCTCACTCAACAT...TGAATCCGTTGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR CCA 90 bp | GTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAACGGATTCAGTGTGGATTCTTCTATaGAGAATAAGCTGCGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIEKFSLLKTFYITATDSVWILL*RISCES Trigger: GCTCTCGCAGCTTATTCTCCATAGAAGAATCCACAC...TGAATCCGTTGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CTGTGTAATGTGATAGAGAAATTTTCTCTGCTAAAGACCTTCTATATCACAGCAGTTAGTTGTGAGCCATaGCTGAAGGTCTTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LCNVIEKFSLLKTFYITAVSCEP*LKVFPH Trigger: ATGTGGAAAGACCTTCAGTCATGGCTCACAACTAAC...TGCTGTGATATAGAAGGTCTTTAGCAGAGAAAATTTCTCTATCACATTACACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR TCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGAGTGCAAAATAAGTTGTaGGCTTTGAGTGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGVQNKL*ALSESL Trigger: AAGGCTTTCACTCAAAGCTCACAACTTATTTTGCAC...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||
| CDS-3UTR GCA 90 bp | CATGAAAGCCAGGTTAGTCATAACAAATGTAACAAAGGAAACCAACTGATAGGATACAGTCCAAAGATTTaGCACGGATATGAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HESQVSHNKCNKGNQLIGYSPKI*HGYEFS Trigger: AGAGAATTCATATCCGTGGCAAATCTTTGGACTGTA...TCCTATCAGTTGGTTTCCTTTGTTACATTTGTTATGACTAACCTGGCTTTCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057652.7 ENSMUST00000074876.13 |
||