Pregenerated sensors for ZFP42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051176Ensembl transcript IDs: ENSMUST00000082120.5, ENSMUST00000209356.2, ENSMUST00000211248.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTACTGCCAAAGTTGGCCATTCTTTAGGATTATCAAATTTACCATaGAGCATATTTCTAAAGGTAAAAGCTAGGCAATTAGGAACTGCA | + |
|
Preference number: 1 (lower is better) Translates to: TTAKVGHSLGLSNLP*SIFLKVKARQLGTA Trigger: TGCAGTTCCTAATTGCCTAGCTTTTACCTTTAGAAATATGCTTCATGGTAAATTTGATAATCCTAAAGAATGGCCAACTTTGGCAGTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| 3UTR CAA 90 bp | AAGTCCCCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTaGAAACTGCTTTCACCATTGACTTTCCTGTTGGAACTATACCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSPSPSIAHIVRVML*KLLSPLTFLLELYH Trigger: ATGGTATAGTTCCAACAGGAAAGTCAATGGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGGGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGTACACACCGCCCTCTaGCTTCTCTGCAGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTVHTAL*LLCRAA Trigger: GGCGGCCCTGCAGAGAAGCCAGAGGGCGGTGTGTAC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGTACACACCGCCCTCTaGCTTCTCTGCAGGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSVHTAL*LLCRAA Trigger: GGCGGCCCTGCAGAGAAGCCAGAGGGCGGTGTGTAC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACGCCTCTCCCCGGTGTaGATGCGGATATGGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSRLSPV*MRIWVR Trigger: GCGCACCCATATCCGCATCCACACCGGGGAGAGGCG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCGCCTCTCCCCGGTGTaGATGCGGATATGGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTRLSPV*MRIWVR Trigger: GCGCACCCATATCCGCATCCACACCGGGGAGAGGCG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCCGCCCGGCCCTTTCTaGCCACTTGTCTTTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTPPGPF*PLVFAV Trigger: AACGGCAAAGACAAGTGGCCAGAAAGGGCCGGGCGG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCCTTCGAACGTGCACTaGTACGGCTTCTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTPSNVH*YGFSPV Trigger: CACCGGAGAGAAGCCGTATCAGTGCACGTTCGAAGG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCTTCGAACGTGCACTaGTACGGCTTCTCTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSPSNVH*YGFSPV Trigger: CACCGGAGAGAAGCCGTATCAGTGCACGTTCGAAGG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCATCTCCCCGGTGTGGATaGGGATATGGGTGCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSSPRCG*GYGCAS Trigger: ACTTGCGCACCCATATCCGCATCCACACCGGGGAGA...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCTCTCCCCGGTGTGGATaGGGATATGGGTGCGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTSPRCG*GYGCAS Trigger: ACTTGCGCACCCATATCCGCATCCACACCGGGGAGA...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGAGGCGTCTCTTGCGTaGCCTCTCTCTTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSEASLA*PLSSLA Trigger: AGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGTTTCGAGCTCTCCGTaGAGGCTTTGCCACACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSVSSSP*RLCHTL Trigger: CAGAGTGTGGCAAAGCCTTCACGGAGAGCTCGAAAC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGGCCTTGCCTCGTCTTaGTTTAGGGTCAGTCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSGLASS*FRVSLS Trigger: CGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGGCCTTGCCTCGTCTTaGTTTAGGGTCAGTCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTGLASS*FRVSLS Trigger: CGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAAGCGGAGGCGTCTCTTaGGTGACCTCTCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSSGGVS*VTSLFS Trigger: AGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCT...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCAGCGGAGGCGTCTCTTaGGTGACCTCTCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTSGGVS*VTSLFS Trigger: AGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCT...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGGGGAGCTTCCACTCTaGTATTCTGGACTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTGELPL*YSGLAL Trigger: CAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGGGGAGCTTCCACTCTaGTATTCTGGACTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSGELPL*YSGLAL Trigger: CAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCATATGGGTGCGCAAGTTaGAATCCAGGGAGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSYGCAS*NPGRSA Trigger: AGCGCTTCTCCCTGGATTTCAACTTGCGCACCCATA...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCACAGCCTTCGAACGTaGACTGATACGGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTHSLRT*TDTASL Trigger: GAGAGAAGCCGTATCAGTGCACGTTCGAAGGCTGTG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACACAGCCTTCGAACGTaGACTGATACGGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSHSLRT*TDTASL Trigger: GAGAGAAGCCGTATCAGTGCACGTTCGAAGGCTGTG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGGCTTCTCTCCGGTGTaGACCAGAAAATGTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTGFSPV*TRKCRF Trigger: AAAGCGACATTTTCTGGTGCACACCGGAGAGAAGCC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGGCTTCTCTCCGGTGTaGACCAGAAAATGTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSGFSPV*TRKCRF Trigger: AAAGCGACATTTTCTGGTGCACACCGGAGAGAAGCC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGTGTGGATGCGGATATaGGTGCGCAAGTTGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTVWMRI*VRKLKS Trigger: GGATTTCAACTTGCGCACCCATATCCGCATCCACAC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAACCTCTCTCTTCTCTTaGTTCGTCCCCTTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSTSLFS*FVPFVM Trigger: CATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGT...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCAATCCTCTTCCAGAATaGGTTCGGAAAACTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTNPLPE*VRKTHL Trigger: GAGGTGAGTTTTCCGAACCCATTCTGGAAGAGGATT...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAAATCCTCTTCCAGAATaGGTTCGGAAAACTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSNPLPE*VRKTHL Trigger: GAGGTGAGTTTTCCGAACCCATTCTGGAAGAGGATT...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCTGGCCACTTGTCTTTaGCGTTTTCTTCATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTLATCL*RFLHLF Trigger: GAACAAATGAAGAAAACGGCAAAGACAAGTGGCCAG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACTGGCCACTTGTCTTTaGCGTTTTCTTCATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSLATCL*RFLHLF Trigger: GAACAAATGAAGAAAACGGCAAAGACAAGTGGCCAG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCATTCTGGTTATTTGACTaGATAAAGCTCTTCTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSFWLFD*IKLFSQ Trigger: CTGCGAGAAGAGCTTTATTCAGTCAAATAACCAGAA...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCTTCTGGTTATTTGACTaGATAAAGCTCTTCTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPFNSTYSKGYAFETAFTFWLFD*IKLFSQ Trigger: CTGCGAGAAGAGCTTTATTCAGTCAAATAACCAGAA...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| 3UTR CAA 72 bp | ATGCTTTTGAAACTGCTTTCACCATTGACTTTCCTGTaGGAACTATACCATGGAATACCAAAAGAGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MLLKLLSPLTFL*ELYHGIPKEAL Trigger: TAAGGCCTCTTTTGGTATTCCATGGTATAGTTCCAACAGGAAAGTCAATGGTGAAAGCAGTTTCAAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 90 bp | CCACACTCTGCACACACGTGCCGCCGGGGCCCGTGGACAAGCATGTaGTTCCTCAGGGCGGTTTTATCCCTCAGCTTCTTCTTGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: PHSAHTCRRGPWTSM*FLRAVLSLSFFLHP Trigger: CGGGTGCAAGAAGAAGCTGAGGGATAAAACCGCCCTGAGGAAGCACATGCTTGTCCACGGGCCCCGGCGGCACGTGTGTGCAGAGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 90 bp | CGGGGAGCTTCCACTCTGGTATTCTGGACTGGCCTTGCCTCGTCTTaGTTTAGGGTCAGTCTGTCGAGGGCTCTTCCGCCCGGCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGASTLVFWTGLASS*FRVSLSRALPPGPF Trigger: GAAAGGGCCGGGCGGAAGAGCCCTCGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 90 bp | CCTGCAAGTAATGAGCTCGCCCCAACCCTCAGCGGAGGCGTCTCTTaGGTGACCTCTCTCTTCTCTTGCTTCGTCCCCTTTGTCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PASNELAPTLSGGVS*VTSLFSCFVPFVMY Trigger: GTACATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTGAGGGTTGGGGCGAGCTCATTACTTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 90 bp | TTCTCGCAGCCATCAAAAGGACACACAAAGCGCCTCTCCCCGGTGTaGATGCGGATATGGGTGCGCAAGTTGAAATCCAGGGAGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSQPSKGHTKRLSPV*MRIWVRKLKSREKR Trigger: GCGCTTCTCCCTGGATTTCAACTTGCGCACCCATATCCGCATCCACACCGGGGAGAGGCGCTTTGTGTGTCCTTTTGATGGCTGCGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS TCA 90 bp | CAAGTAATGAGCTCGCCCCAACCCTCAGCGGAGGCGTCTCTTGCGTaGCCTCTCTCTTCTCTTGCTTCGTCCCCTTTGTCATGTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVMSSPQPSAEASLA*PLSSLASSPLSCTP Trigger: TGGAGTACATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTGAGGGTTGGGGCGAGCTCATTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 90 bp | TCCCGGATGGTGTATGTTACACGGGGAGCTTCCACTCTGGTATTCTaGACTGGCCTTGCCTCGTCTTGCTTTAGGGTCAGTCTGTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRMVYVTRGASTLVF*TGLASSCFRVSLSR Trigger: CCTCGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCCGTGTAACATACACCATCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 90 bp | ATGTACTCCAAAGAAGACTCGAGAAGGGAACTCGCTTCCAGAACCTaGCGAGAAAGGTTTTGCTCCACTTCCTCCAAGCTTTCGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MYSKEDSRRELASRT*RERFCSTSSKLSKD Trigger: ATCCTTCGAAAGCTTGGAGGAAGTGGAGCAAAACCTTTCTCGCCAGGTTCTGGAAGCGAGTTCCCTTCTCGAGTCTTCTTTGGAGTACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS TCA 90 bp | AAAGGAAATCCTCTTCCAGAATGGGTTCGGAAAACTCACCTCGTATaGTGCACTCTAGGTATCCGTCAGGGAAGCCATCTTCCTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGNPLPEWVRKTHLV*CTLGIRQGSHLPQS Trigger: AGACTGAGGAAGATGGCTTCCCTGACGGATACCTAGAGTGCATCATACGAGGTGAGTTTTCCGAACCCATTCTGGAAGAGGATTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACAGCGGAGGCGTCTCTaGCGTGACCTCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSQRRRL*RDLSLL Trigger: GAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCCAGCGGAGGCGTCTCTaGCGTGACCTCTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPFNSTYSKGYAFETAFTQRRRL*RDLSLL Trigger: GAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTG...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACTGGCGAGAAAGGTTTaGCTCCACTTCCTCCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSLARKV*LHFLQA Trigger: AGCTTGGAGGAAGTGGAGCAAAACCTTTCTCGCCAG...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGCCCTTTCTGGCCACTaGTCTTTGCCGTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IPFNSTYSKGYAFETAFTALSGH*SLPFSS Trigger: TGAAGAAAACGGCAAAGACAAGTGGCCAGAAAGGGC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGCCCTTTCTGGCCACTaGTCTTTGCCGTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSALSGH*SLPFSS Trigger: TGAAGAAAACGGCAAAGACAAGTGGCCAGAAAGGGC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCGACCTCTCTCTTCTCTaGCTTCGTCCCCTTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IPFNSTYSKGYAFETAFTDLSLL*LRPLCH Trigger: ATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTC...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCAGACCTCTCTCTTCTCTaGCTTCGTCCCCTTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSDLSLL*LRPLCH Trigger: ATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTC...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCACCTCTGGCCACTTGTCTTaGCCGTTTTCTTCATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IPFNSTYSKGYAFETAFTSGHLS*PFSSFV Trigger: AACAAATGAAGAAAACGGCAAAGACAAGTGGCCAGA...GGTGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCTTCAATAGCACATATAGTAAGGGTTATGCTTTTGAAACTGCTTTCATCTGGCCACTTGTCTTaGCCGTTTTCTTCATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSPSIAHIVRVMLLKLLSSGHLS*PFSSFV Trigger: AACAAATGAAGAAAACGGCAAAGACAAGTGGCCAGA...TGAAAGCAGTTTCAAAAGCATAACCCTTACTATATGTGCTATTGAAGGGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CAA 90 bp | TGCACCAGAAAATGTCGCTTTAGTTTCGAGCTCTCCGTGAAGGCTTaGCCACACTCTGCACACACGTGCCGCCGGGGCCCGTGGACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTRKCRFSFELSVKA*PHSAHTCRRGPWTS Trigger: GCTTGTCCACGGGCCCCGGCGGCACGTGTGTGCAGAGTGTGGCAAAGCCTTCACGGAGAGCTCGAAACTAAAGCGACATTTTCTGGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 72 bp | TCCACTCTGGTATTCTGGACTGGCCTTGCCTCGTCTTaGTTTAGGGTCAGTCTGTCGAGGGCTCTTCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STLVFWTGLASS*FRVSLSRALPP Trigger: GGGCGGAAGAGCCCTCGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 72 bp | AATGAGCTCGCCCCAACCCTCAGCGGAGGCGTCTCTTaGGTGACCTCTCTCTTCTCTTGCTTCGTCCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NELAPTLSGGVS*VTSLFSCFVPF Trigger: AAAGGGGACGAAGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTGAGGGTTGGGGCGAGCTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CAA 72 bp | CACGGGGAGCTTCCACTCTGGTATTCTGGACTGGCCTaGCCTCGTCTTGCTTTAGGGTCAGTCTGTCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HGELPLWYSGLA*PRLALGSVCRG Trigger: CCCTCGACAGACTGACCCTAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 72 bp | CCATCAAAAGGACACACAAAGCGCCTCTCCCCGGTGTaGATGCGGATATGGGTGCGCAAGTTGAAATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSKGHTKRLSPV*MRIWVRKLKSR Trigger: CCTGGATTTCAACTTGCGCACCCATATCCGCATCCACACCGGGGAGAGGCGCTTTGTGTGTCCTTTTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 72 bp | CCCGGATGGTGTATGTTACACGGGGAGCTTCCACTCTaGTATTCTGGACTGGCCTTGCCTCGTCTTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PGWCMLHGELPL*YSGLALPRLAL Trigger: TAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCCGTGTAACATACACCATCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS GCA 72 bp | AGCGGAGGCGTCTCTTGCGTGACCTCTCTCTTCTCTTaGTTCGTCCCCTTTGTCATGTACTCCAAAGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGGVSCVTSLFS*FVPFVMYSKED Trigger: GTCTTCTTTGGAGTACATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 72 bp | GTGTATGTTACACGGGGAGCTTCCACTCTGGTATTCTaGACTGGCCTTGCCTCGTCTTGCTTTAGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VYVTRGASTLVF*TGLASSCFRVS Trigger: ACTGACCCTAAAGCAAGACGAGGCAAGGCCAGTCCAGAATACCAGAGTGGAAGCTCCCCGTGTAACATACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CAA 72 bp | CAGCGGAGGCGTCTCTTGCGTGACCTCTCTCTTCTCTaGCTTCGTCCCCTTTGTCATGTACTCCAAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QRRRLLRDLSLL*LRPLCHVLQRR Trigger: TCTTCTTTGGAGTACATGACAAAGGGGACGAAGCAAGAGAAGAGAGAGGTCACGCAAGAGACGCCTCCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS TCA 72 bp | CCTCTTCCAGAATGGGTTCGGAAAACTCACCTCGTATaGTGCACTCTAGGTATCCGTCAGGGAAGCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPEWVRKTHLV*CTLGIRQGSHL Trigger: AAGATGGCTTCCCTGACGGATACCTAGAGTGCATCATACGAGGTGAGTTTTCCGAACCCATTCTGGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||
| CDS CCA 72 bp | AAAGAAGACTCGAGAAGGGAACTCGCTTCCAGAACCTaGCGAGAAAGGTTTTGCTCCACTTCCTCCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: KEDSRRELASRT*RERFCSTSSKL Trigger: AAGCTTGGAGGAAGTGGAGCAAAACCTTTCTCGCCAGGTTCTGGAAGCGAGTTCCCTTCTCGAGTCTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082120.5 ENSMUST00000209356.2 ENSMUST00000211248.2 |
||