Pregenerated sensors for ZFP418 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034538Ensembl transcript IDs: ENSMUST00000051435.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACAATGCAACATCTTTCGAGGCCTGAGGGTGCTTTCAAGGGTTaGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: KTMQHLSRPEGAFKG*LPGIMMVYLLVLED Trigger: ATCTTCTAACACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCCTCAGGCCTCGAAAGATGTTGCATTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGATGAAGGTCATTTGCAAGGCACAGGAAGTTGAAGCTTCCATTAGGGAAAGAATATGGGCATGTTaGGGGGATATACACTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KGMKVICKAQEVEASIRERIWAC*GDIHSG Trigger: CCCTGAGTGTATATCCCCCCAACATGCCCATATTCT...TTCCCTAATGGAAGCTTCAACTTCCTGTGCCTTGCAAATGACCTTCATCCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR CCA 90 bp | AGATATTCCTTGATGGAGCCTCCATCTAATCCCAGACCAGGTTCGTTTAGACAAGGTGCTTTCAAGGGTTaGCTTCCAGGAATTATGATG | + |
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Preference number: 2 (lower is better) Translates to: RYSLMEPPSNPRPGSFRQGAFKG*LPGIMM Trigger: CATCATAATTCCTGGAAGCCAACCCTTGAAAGCACC...TTGTCTAAACGAACCTGGTCTGGGATTAGATGGAGGCTCCATCAAGGAATATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCATACATATTCAGTGAGAAAAGGGGATGAAGGTCATTTGCAAGGCACAGGAGGCTTCCAGGAATTATaGTGGTCTATCTTTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: THTYSVRKGDEGHLQGTGGFQEL*WSIFWC Trigger: ACACCAAAAGATAGACCATCATAATTCCTGGAAGCC...TCCTGTGCCTTGCAAATGACCTTCATCCCCTTTTCTCACTGAATATGTATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCTGGCAATGCGGCCTAGAACTCTATaGGGCTCTCTAGTTTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RGVTVSMRHYGSYLILAMRPRTL*GSLVCY Trigger: GTAACAAACTAGAGAGCCTCATAGAGTTCTAGGCCG...CATTGCCAGAATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCATACATATTCAGTGAGAAAAGGGGATGAAGGTCATTTGCAAGGCACAGGATACAGTGAAAAACAATaGAACATCTTTCGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: THTYSVRKGDEGHLQGTGYSEKQ*NIFRGL Trigger: CAGGCCTCGAAAGATGTTGCATTGTTTTTCACTGTA...TCCTGTGCCTTGCAAATGACCTTCATCCCCTTTTCTCACTGAATATGTATGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR CCA 72 bp | AAGCTTCCATTAGGGAAGGGGAGAATATGGGCATGTTaGGGGGATATACACTCAGGGCAAGGTGCTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KLPLGKGRIWAC*GDIHSGQGARG Trigger: TCCTCTAGCACCTTGCCCTGAGTGTATATCCCCCCAACATGCCCATATTCTCCCCTTCCCTAATGGAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR CCA 72 bp | CAACATCTTTCGAGGCCTGAGGGTGCTTTCAAGGGTTaGCTTCCAGGAATTATGATGGTCTATCTTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: QHLSRPEGAFKG*LPGIMMVYLLV Trigger: CACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCCTCAGGCCTCGAAAGATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR TCA 72 bp | GTTACAGTGAAAAACAATGCAACATCTTTCGAGGCCTaGGGGTGCTTTCAAGGGTTGGCTTCCAGGAATTAT | + |
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Preference number: 3 (lower is better) Translates to: VTVKNNATSFEA*GCFQGLASRNY Trigger: ATAATTCCTGGAAGCCAACCCTTGAAAGCACCCTCAGGCCTCGAAAGATGTTGCATTGTTTTTCACTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTTGCAAGGCACAGGAAGTTGAAGCTTCCATTAGGGAAGGGGAGAATATGGATGATGGTCTATCTTTaGGTGTTAGAAGATGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: SFARHRKLKLPLGKGRIWMMVYL*VLEDAR Trigger: TCTAGCATCTTCTAACACCAAAAGATAGACCATCAT...CCATATTCTCCCCTTCCCTAATGGAAGCTTCAACTTCCTGTGCCTTGCAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | GGGTGCTTTCAAGGGTTGGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTCAATTCTTGGCTCTGTaGTGCTTCTGGTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GCFQGLASRNYDGLSFGVQFLAL*CFWSRR Trigger: CCTCCTGGACCAGAAGCATCACAGAGCCAAGAATTG...AACACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCTTTCAAGGGTTGGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGGGCCTTTCTGAGGTGTaGGTTCTCTGGTGTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: EGAFKGWLPGIMMVYLLVGLSEV*VLWCFM Trigger: CATGAAACACCAGAGAACCCACACCTCAGAAAGGCC...CACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | AGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCTGGCAATGGAAACGTAGATCTGGGAACCTaGGCCAGGTGCTTCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SDSFYETLWQLFNSGNGNVDLGT*ARCFSA Trigger: GGCGCTGAAGCACCTGGCTCAGGTTCCCAGATCTAC...GTTTCCATTGCCAGAATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | CTAATCCCAGACCAGGTTCGTTTAGACAAAATACAGACCCATACATATTCAGTGAGATACAGGAGCCTCTaGGATTCATCCAGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIPDQVRLDKIQTHTYSVRYRSL*DSSRSS Trigger: GGAGCTCCTGGATGAATCTCAGAGGCTCCTGTATCT...CACTGAATATGTATGGGTCTGTATTTTGTCTAAACGAACCTGGTCTGGGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | ACCCATACATATTCAGTGAGAAAAGGGGATGAAGGTCATTTGCAAGGCACAGGAGTCATGACACCCATATaGTCGGTTTTCAGTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: THTYSVRKGDEGHLQGTGVMTPI*SVFSLI Trigger: GATCAGACTGAAAACCGACCATATGGGTGTCATGAC...TCCTGTGCCTTGCAAATGACCTTCATCCCCTTTTCTCACTGAATATGTATGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | ATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGTCTAGGCTTTCCTCTGCTTCAGACCAATaGGCCAGTGAGGTTATAAGG | + |
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Preference number: 4 (lower is better) Translates to: MMVYLLVLEDARELSRLSSASDQ*ASEVIR Trigger: CCTTATAACCTCACTGGCTCATTGGTCTGAAGCAGA...GGAAAGCCTAGACAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | CTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCTAGTTCCTATCATGGGTCGGTTTTCAGTCTaGTCTGTCTGGGATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLLHINMAGSLWLVPIMGRFSV*SVWDGA Trigger: TGCACCATCCCAGACAGATCAGACTGAAAACCGACC...CATGATAGGAACTAGCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | ATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGTCTAGGCTTTCCCCTGTGTGTGTTCTCTaGTGTCGCAGAAGACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: MMVYLLVLEDARELSRLSPVCVL*CRRRLE Trigger: TTCTAGTCTTCTGCGACATCAGAGAACACACACAGG...GGAAAGCCTAGACAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTTCAAGGGTTGGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTGACAGAAGGGTTCCCTaGTACATGGAATATACAGTT | + |
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Preference number: 4 (lower is better) Translates to: GCFQGLASRNYDGLSFGVDRRVP*YMEYTV Trigger: AACTGTATATTCCATGTAGCAGGGAACCCTTCTGTC...AACACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | CTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCTAGTTCCTATCATGCAGATGTCAGAGGGATaGGGCTTCTTCGTGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLLHINMAGSLWLVPIMQMSEG*GFFVGR Trigger: TCTACCCACGAAGAAGCCCCATCCCTCTGACATCTG...CATGATAGGAACTAGCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | AGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCTGGCAATGGAAACGGCTTCTCTGTAGTGTaGGTCCTCTGGTGTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: SDSFYETLWQLFNSGNGNGFSVV*VLWCVI Trigger: GATTACACACCAGAGGACTCACACTACAGAGAAGCC...GTTTCCATTGCCAGAATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | CAAGGTGCTAGAGGAGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTAGTCCTGATCTGTGGTaGACAGGTTTTGTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGARGVTVSMRHYGSYLISPDLW*TGFVFS Trigger: GCTGAAGACAAAACCTGTGCACCACAGATCAGGACT...AATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACTCCTCTAGCACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTTCAAGGGTTGGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTGGTAGGTCACTTAGATaGAAGATATCTTTAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: GCFQGLASRNYDGLSFGVGRSLR*KISLRT Trigger: CGTCCTTAAAGATATCTTGCATCTAAGTGACCTACC...AACACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGGGAATGGCCTTGGGTTaGAGAAGATTCCATACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LPGIMMVYLLVLEDARELGMALG*RRFHTA Trigger: AGCTGTATGGAATCTTCTCCAACCCAAGGCCATTCC...CAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCATAATTCCTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | AAAATCCATAAGGTCTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCAGTCTTGGATATTCATaGAGCCTGTGTTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KIHKVFYYCILTWQEVSGSLGYS*SLCWGL Trigger: CAGCCCCCAACACAGGCTTCATGAATATCCAAGACT...GCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAGACCTTATGGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR TCA 90 bp | GGGTGCTTTCAAGGGTTGGCTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTGGCTTTTCTCCAGTGTaGATTTTGGAGTGTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: GCFQGLASRNYDGLSFGVGFSPV*ILECLI Trigger: TATTAAACACTCCAAAATTCACACTGGAGAAAAGCC...AACACCAAAAGATAGACCATCATAATTCCTGGAAGCCAACCCTTGAAAGCACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | ATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGTCTAGGCTTTCCACCCCTCCTTTCCACTaGAAAGTCTTGGATATTCAT | + |
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Preference number: 4 (lower is better) Translates to: MMVYLLVLEDARELSRLSTPPFH*KVLDIH Trigger: ATGAATATCCAAGACTTTGCAGTGGAAAGGAGGGGT...GGAAAGCCTAGACAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | ATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGTCTAGGCTTTCCTCCACTGCAAAGTCTTaGATATTCATGAAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MMVYLLVLEDARELSRLSSTAKS*IFMKPV Trigger: CACAGGCTTCATGAATATCCAAGACTTTGCAGTGGA...GGAAAGCCTAGACAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | AAAATCCATAAGGTCTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCTTTGTCTTCAGCCTCTaGTTCAGACCAATGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KIHKVFYYCILTWQEVSGFVFSL*FRPMSQ Trigger: CTGGCTCATTGGTCTGAAGCAGAGGCTGAAGACAAA...GCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAGACCTTATGGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCTAGAGGAGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTTCTTTAACCAATTCTTaGCTCTGTGATGCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGARGVTVSMRHYGSYLISLTNS*LCDASG Trigger: ACCAGAAGCATCACAGAGCCAAGAATTGGTTAAAGA...AATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACTCCTCTAGCACCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | AGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCTGGCAATGGAAACGGGTTCCCTGCTACATaGAATATACAGTTCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: SDSFYETLWQLFNSGNGNGFPAT*NIQFFT Trigger: TGTGAAGAACTGTATATTCCATGTAGCAGGGAACCC...GTTTCCATTGCCAGAATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | AAAATCCATAAGGTCTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCCTTTGGGAATGGCCTTaGGTTGGAGAAGATTCCATA | + |
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Preference number: 4 (lower is better) Translates to: KIHKVFYYCILTWQEVSGLWEWP*VGEDSI Trigger: TATGGAATCTTCTCCAACCCAAGGCCATTCCCAAAG...GCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAGACCTTATGGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCTAGAGGAGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTGCCTGTGTTGGGGGCTaGAAGATTTGTTATATTTAT | + |
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Preference number: 4 (lower is better) Translates to: QGARGVTVSMRHYGSYLIACVGG*KICYIY Trigger: ATAAATATAACAAATCTTCCAGCCCCCAACACAGGC...AATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACTCCTCTAGCACCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGCATAAAATTCTGTTGTaGTGTGAATCCTACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPGIMMVYLLVLEDARELHKILL*CESYCV Trigger: AACACAGTAGGATTCACACCACAACAGAATTTTATG...CAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCATAATTCCTGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | AGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCTGGCAATGGAAACTACTTGTTTAAGTCTTaGTCACAACTGTTAGACTCA | + |
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Preference number: 4 (lower is better) Translates to: SDSFYETLWQLFNSGNGNYLFKS*SQLLDS Trigger: TGAGTCTAACAGTTGTGAGCAAGACTTAAACAAGTA...GTTTCCATTGCCAGAATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR GCA 90 bp | CTTTTATTATTGCATATTAACATGGCAGGAAGTCTCTGGCTAGTTCCTATCATGACAATTGTAAGGCTTTaGTTTCGTGTGAATTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLLLHINMAGSLWLVPIMTIVRL*FRVNFL Trigger: CAGAAAATTCACACGAAAGCAAAGCCTTACAATTGT...CATGATAGGAACTAGCCAGAGACTTCCTGCCATGTTAATATGCAATAATAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS TCA 90 bp | CAGAGGGATGGGGCTTCTTCGTGGGTAGACCTTCCTTTGCAGTCCTaGTCTGTGGTGCACAGGTTTTGTCTTCAGCCTCTGCTTCAGACC | + |
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Preference number: 5 (lower is better) Translates to: QRDGASSWVDLPLQS*SVVHRFCLQPLLQT Trigger: GGTCTGAAGCAGAGGCTGAAGACAAAACCTGTGCACCACAGATCAGGACTGCAAAGGAAGGTCTACCCACGAAGAAGCCCCATCCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS GCA 90 bp | CACACCTCAGTCAAATGTGGTTTCTGCCCGGGTAGGTCACTTAGATaGAAGATATCTTTAAGGACGGTGCTACAGATGTCAGAGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: HTSVKCGFCPGRSLR*KISLRTVLQMSEGW Trigger: CCATCCCTCTGACATCTGTAGCACCGTCCTTAAAGATATCTTGCATCTAAGTGACCTACCCGGGCAGAAACCACATTTGACTGAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | AGATATTCCTTGATGGAGCCTCCATCTAATCCCAGACCAGGTTCGTTTAGACAAGGGAATGGCCTTGGGTaGGAGAAGATTCCATACAGC | + |
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Preference number: 5 (lower is better) Translates to: RYSLMEPPSNPRPGSFRQGNGLG*EKIPYS Trigger: GCTGTATGGAATCTTCTCCAACCCAAGGCCATTCCC...TTGTCTAAACGAACCTGGTCTGGGATTAGATGGAGGCTCCATCAAGGAATATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS GCA 90 bp | AGCTGGGAATTTCTCGCCAATCTTACTACAGACAGAAGGGTTCCCTaGTACATGGAATATACAGTTCTTCACAAGGGAGTCCACATCTTT | + |
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Preference number: 5 (lower is better) Translates to: SWEFLANLTTDRRVP*YMEYTVLHKGVHIF Trigger: AAAGATGTGGACTCCCTTGTGAAGAACTGTATATTCCATGTAGCAGGGAACCCTTCTGTCTGTAGTAAGATTGGCGAGAAATTCCCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | ATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGTCTAGGCTTTCCTGTGGTGCACAGGTTTaGTCTTCAGCCTCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MMVYLLVLEDARELSRLSCGAQV*SSASAS Trigger: TGAAGCAGAGGCTGAAGACAAAACCTGTGCACCACA...GGAAAGCCTAGACAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | CTAATCCCAGACCAGGTTCGTTTAGACAAAATACAGACCCATACATATTCAGTGCCTTTGGGAATGGCCTaGGGTTGGAGAAGATTCCAT | + |
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Preference number: 5 (lower is better) Translates to: LIPDQVRLDKIQTHTYSVPLGMA*GWRRFH Trigger: ATGGAATCTTCTCCAACCCAAGGCCATTCCCAAAGG...CACTGAATATGTATGGGTCTGTATTTTGTCTAAACGAACCTGGTCTGGGATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | CTAATCCCAGACCAGGTTCGTTTAGACAAAATACAGACCCATACATATTCAGTGTTTTGTTTCTCACCTTaGGGAATGGCCTTGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LIPDQVRLDKIQTHTYSVFCFSP*GMALGW Trigger: CCAACCCAAGGCCATTCCCAAAGGTGAGAAACAAAA...CACTGAATATGTATGGGTCTGTATTTTGTCTAAACGAACCTGGTCTGGGATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | AGATATTCCTTGATGGAGCCTCCATCTAATCCCAGACCAGGTTCGTTTAGACAATTCCACTGCAAAGTCTaGGATATTCATGAAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RYSLMEPPSNPRPGSFRQFHCKV*DIHEAC Trigger: ACAGGCTTCATGAATATCCAAGACTTTGCAGTGGAA...TTGTCTAAACGAACCTGGTCTGGGATTAGATGGAGGCTCCATCAAGGAATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | TCATTTGCAAGGCACAGGAAGTTGAAGCTTCCATTAGGGAAGGGGAGAATATGGCGATTAAGTCTGGATTaGTATTCAAAGGCTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SFARHRKLKLPLGKGRIWRLSLD*YSKAFP Trigger: TGGAAAAGCCTTTGAATACAAATCCAGACTTAATCG...CCATATTCTCCCCTTCCCTAATGGAAGCTTCAACTTCCTGTGCCTTGCAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAGGAATTATGATGGTCTATCTTTTGGTGTTAGAAGATGCTAGAGAGTTGGAGTGTTTAATAAGGTaGGCGCTTTGGCTGAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LPGIMMVYLLVLEDARELECLIR*ALWLKD Trigger: ATCCTTCAGCCAAAGCGCCAACCTTATTAAACACTC...CAACTCTCTAGCATCTTCTAACACCAAAAGATAGACCATCATAATTCCTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | CTAATCCCAGACCAGGTTCGTTTAGACAAAATACAGACCCATACATATTCAGTGTGGGGGCTGGAAGATTaGTTATATTTATCTGACTTA | + |
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Preference number: 5 (lower is better) Translates to: LIPDQVRLDKIQTHTYSVWGLED*LYLSDL Trigger: TAAGTCAGATAAATATAACAAATCTTCCAGCCCCCA...CACTGAATATGTATGGGTCTGTATTTTGTCTAAACGAACCTGGTCTGGGATTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCTAGAGGAGTGACAGTTTCTATGAGACATTATGGCAGCTATTTAATTCACAATTGTAAGGCTTaGCTTTCGTGTGAATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: QGARGVTVSMRHYGSYLIHNCKA*LSCEFS Trigger: AGAAAATTCACACGAAAGCAAAGCCTTACAATTGTG...AATTAAATAGCTGCCATAATGTCTCATAGAAACTGTCACTCCTCTAGCACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS TCA 72 bp | GGGGCTTCTTCGTGGGTAGACCTTCCTTTGCAGTCCTaGTCTGTGGTGCACAGGTTTTGTCTTCAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GASSWVDLPLQS*SVVHRFCLQPL Trigger: CAGAGGCTGAAGACAAAACCTGTGCACCACAGATCAGGACTGCAAAGGAAGGTCTACCCACGAAGAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS CCA 72 bp | ATATCTTTAAGGACGGTGCTACAGATGTCAGAGGGATaGGGCTTCTTCGTGGGTAGACCTTCCTTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ISLRTVLQMSEG*GFFVGRPSFAV Trigger: GACTGCAAAGGAAGGTCTACCCACGAAGAAGCCCCATCCCTCTGACATCTGTAGCACCGTCCTTAAAGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS CCA 72 bp | GTTAGACTCAAACCCCTCCTTTCCACTGCAAAGTCTTaGATATTCATGAAGCCTGTGTTGGGGGCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VRLKPLLSTAKS*IFMKPVLGAGR Trigger: TCTTCCAGCCCCCAACACAGGCTTCATGAATATCCAAGACTTTGCAGTGGAAAGGAGGGGTTTGAGTCTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS TCA 72 bp | GCACAGGTTTTGTCTTCAGCCTCTGCTTCAGACCAATaGGCCAGTGAGGTTATAAGGGTAAAATTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AQVLSSASASDQ*ASEVIRVKFSS Trigger: GCTGGAGAATTTTACCCTTATAACCTCACTGGCTCATTGGTCTGAAGCAGAGGCTGAAGACAAAACCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS TCA 72 bp | GAGTCCACATCTTTCTTTAACCAATTCTTGGCTCTGTaGTGCTTCTGGTCCAGGAGGTCTGTACACACCTCA | + |
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Preference number: 6 (lower is better) Translates to: ESTSFFNQFLAL*CFWSRRSVHTS Trigger: TGAGGTGTGTACAGACCTCCTGGACCAGAAGCATCACAGAGCCAAGAATTGGTTAAAGAAAGATGTGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS CCA 72 bp | TCACAAGGGAGTCCACATCTTTCTTTAACCAATTCTTaGCTCTGTGATGCTTCTGGTCCAGGAGGTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SQGSPHLSLTNS*LCDASGPGGLY Trigger: GTACAGACCTCCTGGACCAGAAGCATCACAGAGCCAAGAATTGGTTAAAGAAAGATGTGGACTCCCTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS GCA 72 bp | GTCAAATGTGGTTTCTGCCCGGGTAGGTCACTTAGATaGAAGATATCTTTAAGGACGGTGCTACAGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VKCGFCPGRSLR*KISLRTVLQMS Trigger: TGACATCTGTAGCACCGTCCTTAAAGATATCTTGCATCTAAGTGACCTACCCGGGCAGAAACCACATTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS GCA 72 bp | GTCTGGGATGGTGCAATCGAGTACTTGTTTAAGTCTTaGTCACAACTGTTAGACTCAAACCCCTCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VWDGAIEYLFKS*SQLLDSNPSFP Trigger: TGGAAAGGAGGGGTTTGAGTCTAACAGTTGTGAGCAAGACTTAAACAAGTACTCGATTGCACCATCCCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS CCA 72 bp | CCAATCTTACTACAGACAGAAGGGTTCCCTGCTACATaGAATATACAGTTCTTCACAAGGGAGTCCACATCT | + |
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Preference number: 6 (lower is better) Translates to: PILLQTEGFPAT*NIQFFTRESTS Trigger: AGATGTGGACTCCCTTGTGAAGAACTGTATATTCCATGTAGCAGGGAACCCTTCTGTCTGTAGTAAGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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| CDS CAA 90 bp | ACACTTAATTTGATTTTGTTTCTCACCTTTGGGAATGGCCTTGGGTaGGAGAAGATTCCATACAGCTGGGAATTTCTCGCCAATCTTACT | + |
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Preference number: 6 (lower is better) Translates to: TLNLILFLTFGNGLG*EKIPYSWEFLANLT Trigger: AGTAAGATTGGCGAGAAATTCCCAGCTGTATGGAATCTTCTCCAACCCAAGGCCATTCCCAAAGGTGAGAAACAAAATCAAATTAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051435.8 |
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