Pregenerated sensors for ZFP414 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073423Ensembl transcript IDs: ENSMUST00000073570.12, ENSMUST00000166627.8, ENSMUST00000170225.3
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGCGAAGGGTCGGACTCTaGGGGACGCTCGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWRRVGL*GTLGYR Trigger: CCTGTACCCGAGCGTCCCCCAGAGTCCGACCCTTCG...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | GCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTCTGGTGGCCCTGGAGTaGCAGCCAGGAATGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFARPTQGIGMKAPPPCPLVALE*QPGMGA Trigger: TGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAG...AGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGTAGTGGCAGCCAGGAATaGGCGCAGTCGAGGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: FARPTQGIGMKAPPPCPGSGSQE*AQSRGT Trigger: AGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACT...ACCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCAGTGCTGGATGCTGGTaGCCCTGGAGTGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPSAGCW*PWSGSQ Trigger: CTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACT...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCGGGTGGTGGCGGGGCTaGGTTCTGACCATGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPGWWRG*VLTMVY Trigger: ATAGACCATGGTCAGAACCCAGCCCCGCCACCACCC...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | GCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTTCCAGATGGCAGTGCTaGATGCTGGTGGCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFARPTQGIGMKAPPPCPSRWQC*MLVALE Trigger: CTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGA...AGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGGCATCAGAGCCACCCTaGGGTCTTCTGGGACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWASEPP*GLLGLL Trigger: CAGTAGTCCCAGAAGACCTCAGGGTGGCTCTGATGC...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGCCCCATCTGGAGATaGCACCTCCTTGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPCPIWR*HLLVWL Trigger: GAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCA...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS-3UTR GCA 90 bp | GCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTTCTTCCAGATGGCAGTaGTGGATGCTGGTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AFARPTQGIGMKAPPPCPSSRWQ*WMLVAL Trigger: CAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGA...AGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGTGTGTGGGTGGGCAGTaGGTACGGAGATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWCVGGQ*VRRCCA Trigger: AGCACAGCATCTCCGTACCCACTGCCCACCCACACA...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGCCAGCTCCTGCATGCTaGGGAAACTCTCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWPAPAC*GNSQCS Trigger: GCTGCACTGAGAGTTTCCCCAGCATGCAGGAGCTGG...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGAAGTGCTGGATGCTGGTaGCCCTGGAGTGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRHCCFPAFARPTQGIGSAGCW*PWSGSQ Trigger: CTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACT...TCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCGGCGGGGCTGGGTTCTaGCCATGGTCTATACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPGGAGF*PWSIQT Trigger: TGTTTGTATAGACCATGGTCAGAACCCAGCCCCGCC...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | TTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGTTGGGCTACCAGCTCCTaGATGCTGGGGAAACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FARPTQGIGMKAPPPCPGWATSS*MLGKLS Trigger: TGAGAGTTTCCCCAGCATGCAGGAGCTGGTAGCCCA...ACCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGCAGGGTTCAAGTATaGAAGGAAGGGCCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPCRVQV*KEGPSG Trigger: CCCACTGGGCCCTTCCTTCCATACTTGAACCCTGCA...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATGGCAGTGCTGGATGCTaGTGGCCCTGGAGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKGQALLLSSIRKAHTGHGSAGC*WPWSGS Trigger: GCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCC...ATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGACCAGCTCCTGCATGCTaGGGAAACTCTCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDRHCCFPAFARPTQGIGPAPAC*GNSQCS Trigger: GCTGCACTGAGAGTTTCCCCAGCATGCAGGAGCTGG...TCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGATGCTGGTGGCCCTaGAGTGGCAGCCAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGIGCWWP*SGSQEW Trigger: CCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCC...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | GCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGACTCTTCTTCCAGATaGCAGTGCTGGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFARPTQGIGMKAPPPCPDSSSR*QCWMLV Trigger: CACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTC...AGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGGGCAATTCTCACACTTaGAGTAGCGGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWGNSHT*SSGWAC Trigger: ACAAGCCCAACCGCTACTTCAAGTGTGAGAATTGCC...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | AGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGAAGAGTGAACGGTGAGTaGGGAAGCGCAGGAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RDRHCCFPAFARPTQGIGRVNGE*GSAGGN Trigger: ATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCT...TCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | TTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATGAGTTTGCCTTCCAGTaGCTGTGTGGGTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKGQALLLSSIRKAHTGHEFAFQ*LCGWAV Trigger: CACTGCCCACCCACACAGTCACTGGAAGGCAAACTC...ATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGAGTTTGCCTTCCAGTaGCTGTGTGGGTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGIEFAFQ*LCGWAV Trigger: CACTGCCCACCCACACAGTCACTGGAAGGCAAACTC...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | AGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCAAACATGCAGATGCTTaGAGAGTGAACGGTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SIRKAHTGHRNEGPSTLPKHADA*RVNGEC Trigger: GCACTCACCGTTCACTCTTCAAGCATCTGCATGTTT...GGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | TCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACATCACCTGCACGCACCTaGGGGCGCATCAGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SCILRDRHCCFPAFARPTSPART*GRIRAT Trigger: GGTGGCTCTGATGCGCCCTCAGGTGCGTGCAGGTGA...TGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | TTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATTGGGGAAACTCTCAGTaGAGCTCAGCGCGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKGQALLLSSIRKAHTGHWGNSQ*SSARSI Trigger: GATGCTCCGCGCTGAGCTGCACTGAGAGTTTCCCCA...ATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGTGCCACCTCCTTGTCTaGCTCACCGGAGCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RHCCFPAFARPTQGIGMKCHLLV*LTGAGF Trigger: GAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCA...CTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS-3UTR CCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAACCGAAGGTCCTCATTaGTCCCCACGCCTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGITEGPH*SPRLCW Trigger: CCAACACAGGCGTGGGGACCAATGAGGACCTTCGGT...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATACCGAAGGTCCTCATTaGTCCCCACGCCTGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKGQALLLSSIRKAHTGHTEGPH*SPRLCW Trigger: CCAACACAGGCGTGGGGACCAATGAGGACCTTCGGT...ATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATATGTGTGGGTGGGCAGTaGGTACGGAGATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGICVGGQ*VRRCCA Trigger: AGCACAGCATCTCCGTACCCACTGCCCACCCACACA...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACGAAGGGTCGGACTCTaGGGGACGCTCGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCILRDRHCCFPAFARPTRRVGL*GTLGYR Trigger: CCTGTACCCGAGCGTCCCCCAGAGTCCGACCCTTCG...TGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACAGGCAGTGCTGGATGCTaGTGGCCCTGGAGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCILRDRHCCFPAFARPTGSAGC*WPWSGS Trigger: GCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCC...TGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATACAGATGCTTGAAGAGTaGACGGTGAGTGCGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGIQMLEE*TVSAEA Trigger: CGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTG...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | AGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGCAGATGCTTGAAGAGTaGACGGTGAGTGCGGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: RHCCFPAFARPTQGIGMKQMLEE*TVSAEA Trigger: CGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTG...CTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATATGGGCTACCAGCTCCTaGATGCTGGGGAAACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGIWATSS*MLGKLS Trigger: TGAGAGTTTCCCCAGCATGCAGGAGCTGGTAGCCCA...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | ATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCTGCAGGGTTCAAGTATaGAAGGAAGGGCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILRDRHCCFPAFARPTQGCRVQV*KEGPSG Trigger: CCCACTGGGCCCTTCCTTCCATACTTGAACCCTGCA...GCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | AAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCCTGGTGGCCCTGGAGTaGCAGCCAGGAATGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KSCILRDRHCCFPAFARPLVALE*QPGMGA Trigger: TGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAG...GGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATATTGGTTGAGCCAGTCTaGCAACTGTCTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGILVEPV*QLSEAG Trigger: TCCAGCCTCAGACAGTTGCCAGACTGGCTCAACCAA...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR TCA 90 bp | TTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGCAATTCTCACACTTaGAGTAGCGGTTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRDRHCCFPAFARPTQGIGNSHT*SSGWAC Trigger: ACAAGCCCAACCGCTACTTCAAGTGTGAGAATTGCC...TATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | ATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACATGGGGAAACTCTCAGTaGAGCTCAGCGCGGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MYFKGQALLLSSIRKAHTWGNSQ*SSARSI Trigger: GATGCTCCGCGCTGAGCTGCACTGAGAGTTTCCCCA...TGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR CCA 90 bp | TCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACCACGGAGGAAAAAGTaGCTGGAGCTGCCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCILRDRHCCFPAFARPTPRRKK*LELPHL Trigger: CAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGG...TGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS-3UTR TCA 90 bp | ATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGCGGGGCTGGGTTCTaGCCATGGTCTATACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: MYFKGQALLLSSIRKAHTGGAGF*PWSIQT Trigger: TGTTTGTATAGACCATGGTCAGAACCCAGCCCCGCC...TGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | TCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACAAGAGTGAACGGTGAGTaGGGAAGCGCAGGAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCILRDRHCCFPAFARPTRVNGE*GSAGGN Trigger: ATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCT...TGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS-3UTR GCA 90 bp | GCATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTTGGTCTATACAAACATaGAGATGCTTGAAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFARPTQGIGMKAPPPCPWSIQT*RCLKSE Trigger: TTCACTCTTCAAGCATCTGCATGTTTGTATAGACCA...AGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR GCA 90 bp | AAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCTCTTCCAGATGGCAGTaGTGGATGCTGGTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSCILRDRHCCFPAFARPSSRWQ*WMLVAL Trigger: CAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGA...GGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCGGATGCTGGTGGCCCTaGAGTGGCAGCCAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVKIMYFKGQALLLSSIRGCWWP*SGSQEW Trigger: CCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCC...GCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTACACAGGAACGCCAGCGCAGATGAAGGCATAGGTACCAGTCATTTTAAATTGAAGAGTGAACGGTaGGTGCGGAAGCGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLHRNASADEGIGTSHFKLKSER*VRKRRR Trigger: CCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAA...TTTAAAATGACTGGTACCTATGCCTTCATCTGCGCTGGCGTTCCTGTGTAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS-3UTR CCA 90 bp | AAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCTTGGTTGAGCCAGTCTaGCAACTGTCTGAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSCILRDRHCCFPAFARPLVEPV*QLSEAG Trigger: TCCAGCCTCAGACAGTTGCCAGACTGGCTCAACCAA...GGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCGGGTGGTGGCGGGGCTaGGTTCTGACCATGGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KVKIMYFKGQALLLSSIRGWWRG*VLTMVY Trigger: ATAGACCATGGTCAGAACCCAGCCCCGCCACCACCC...GCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | AAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCGACTCTTCTTCCAGATaGCAGTGCTGGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSCILRDRHCCFPAFARPDSSSR*QCWMLV Trigger: CACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTC...GGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTTCACCTGCACGCACCTaGGGGCGCATCAGAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSISPART*GRIRAT Trigger: GGTGGCTCTGATGCGCCCTCAGGTGCGTGCAGGTGA...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR TCA 90 bp | AAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCAAACATGCAGATGCTTaGAGAGTGAACGGTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSCILRDRHCCFPAFARPKHADA*RVNGEC Trigger: GCACTCACCGTTCACTCTTCAAGCATCTGCATGTTT...GGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCGCCTACCAGCTCCTGCATaGTGGGGAAACTCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVKIMYFKGQALLLSSIRLPAPA*WGNSQC Trigger: GCACTGAGAGTTTCCCCAGCATGCAGGAGCTGGTAG...GCGAATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTAGTGGCAGCCAGGAATaGGCGCAGTCGAGGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSISGSQE*AQSRGT Trigger: AGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACT...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTTCCAGATGGCAGTGCTaGATGCTGGTGGCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSISRWQC*MLVALE Trigger: CTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGA...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTGCATCAGAGCCACCCTaGGGTCTTCTGGGACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSIASEPP*GLLGLL Trigger: CAGTAGTCCCAGAAGACCTCAGGGTGGCTCTGATGC...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTCTACCAGCTCCTGCATaGTGGGGAAACTCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSILPAPA*WGNSQC Trigger: GCACTGAGAGTTTCCCCAGCATGCAGGAGCTGGTAG...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTATGGTCCCACACTGGTaGCATGGCTGTTGGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSIMVPHW*HGCWVR Trigger: CCTAACCCAACAGCCATGCCACCAGTGTGGGACCAT...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTAAAAATCATGTATTTTAAGGGACAGGCACTGCTGCTTTCCAGCATTTGGTCTATACAAACATaGAGATGCTTGAAGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKVKIMYFKGQALLLSSIWSIQT*RCLKSE Trigger: TTCACTCTTCAAGCATCTGCATGTTTGTATAGACCA...AATGCTGGAAAGCAGCAGTGCCTGTCCCTTAAAATACATGATTTTTACCTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS CCA 90 bp | GAGGCAGCAGCCGGGGCTAGAGCAGGGTATTTGTTTCCCTGGCGGTaGACGGCGTCTGGGCAACCGAAGGTCCTCATTGGTCCCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAAAGARAGYLFPWR*TASGQPKVLIGPHA Trigger: GGCGTGGGGACCAATGAGGACCTTCGGTTGCCCAGACGCCGTCCACCGCCAGGGAAACAAATACCCTGCTCTAGCCCCGGCTGCTGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 90 bp | GATGGCAGTGCTGGATGCTGGTGGCCCTGGAGTGGCAGCCAGGAATaGGCGCAGTCGAGGGGGACTCAGGCCAAAGGGTGCAGGGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DGSAGCWWPWSGSQE*AQSRGTQAKGCRVQ Trigger: TTGAACCCTGCACCCTTTGGCCTGAGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 90 bp | GCCTTGACTCTTCTTCCAGATGGCAGTGCTGGATGCTGGTGGCCCTaGAGTGGCAGCCAGGAATGGGCGCAGTCGAGGGGGACTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTLLPDGSAGCWWP*SGSQEWAQSRGTQA Trigger: GGCCTGAGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS CCA 90 bp | GGTAGCGCCTTGACTCTTCTTCCAGATGGCAGTGCTGGATGCTGGTaGCCCTGGAGTGGCAGCCAGGAATGGGCGCAGTCGAGGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GSALTLLPDGSAGCW*PWSGSQEWAQSRGT Trigger: AGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGCGCTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS GCA 90 bp | TGGGTTAGGGCTGGGCTCCTCCACGGAGGAAAAAGTGGCTGGAGCTaGCCCATCTGGAGATGCCACCTCCTTGTCTGGCTCACCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WVRAGLLHGGKSGWS*PIWRCHLLVWLTGA Trigger: AGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAGGAGCCCAGCCCTAACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | GGCTGTTGGGTTAGGGCTGGGCTCCTCCACGGAGGAAAAAGTGGCTaGAGCTGCCCCATCTGGAGATGCCACCTCCTTGTCTGGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GCWVRAGLLHGGKSG*SCPIWRCHLLVWLT Trigger: GGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAGGAGCCCAGCCCTAACCCAACAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS GCA 90 bp | ACTACTGGTAGCGCCTTGACTCTTCTTCCAGATGGCAGTGCTGGATaGTGGTGGCCCTGGAGTGGCAGCCAGGAATGGGCGCAGTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTGSALTLLPDGSAG*WWPWSGSQEWAQSR Trigger: CCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGCGCTACCAGTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS CCA 90 bp | CTGCCCCATCTGGAGATGCCACCTCCTTGTCTGGCTCACCGGAGCTaGATTCTACAGTGGTCAGCGTGTCCGAGCTGGGCCTGGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPHLEMPPPCLAHRS*ILQWSACPSWAWMV Trigger: AACCATCCAGGCCCAGCTCGGACACGCTGACCACTGTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | GCTGGGCTCCTCCACGGAGGAAAAAGTGGCTGGAGCTGCCCCATCTaGAGATGCCACCTCCTTGTCTGGCTCACCGGAGCTGGATTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: AGLLHGGKSGWSCPI*RCHLLVWLTGAGFY Trigger: GTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAGGAGCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | TTGCTGCAGAGGTCCTCCATGGTCCCACACTGGTGGCATGGCTGTTaGGTTAGGGCTGGGCTCCTCCACGGAGGAAAAAGTGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQRSSMVPHWWHGC*VRAGLLHGGKSGWS Trigger: GCTCCAGCCACTTTTTCCTCCGTGGAGGAGCCCAGCCCTAACCCAACAGCCATGCCACCAGTGTGGGACCATGGAGGACCTCTGCAGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | GGGACGCTCGGGTACAGGTGGCTCTTTGTCCAGGGCAGGGGGTGGTaGCGGGGCTGGGTTCTGACCATGGTCTATACAAACATGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTLGYRWLFVQGRGW*RGWVLTMVYTNMQM Trigger: CATCTGCATGTTTGTATAGACCATGGTCAGAACCCAGCCCCGCCACCACCCCCTGCCCTGGACAAAGAGCCACCTGTACCCGAGCGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS GCA 90 bp | GGTTGGGCTTGTAATGCAGCTTGCCGTGGGCTACCAGCTCCTGCATaGTGGGGAAACTCTCAGTGCAGCTCAGCGCGGAGCATCGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWACNAACRGLPAPA*WGNSQCSSARSIGR Trigger: TCTTCCGATGCTCCGCGCTGAGCTGCACTGAGAGTTTCCCCAGCATGCAGGAGCTGGTAGCCCACGGCAAGCTGCATTACAAGCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS GCA 90 bp | CTCCTCCACGGAGGAAAAAGTGGCTGGAGCTGCCCCATCTGGAGATaGCACCTCCTTGTCTGGCTCACCGGAGCTGGATTCTACAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLHGGKSGWSCPIWR*HLLVWLTGAGFYSG Trigger: ACCACTGTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | AAAAGTGGCTGGAGCTGCCCCATCTGGAGATGCCACCTCCTTGTCTaGCTCACCGGAGCTGGATTCTACAGTGGTCAGCGTGTCCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSGWSCPIWRCHLLV*LTGAGFYSGQRVRA Trigger: AGCTCGGACACGCTGACCACTGTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | TGGATAGGCAACTTGCTGCAGAGGTCCTCCATGGTCCCACACTGGTaGCATGGCTGTTGGGTTAGGGCTGGGCTCCTCCACGGAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WIGNLLQRSSMVPHW*HGCWVRAGLLHGGK Trigger: TTTTCCTCCGTGGAGGAGCCCAGCCCTAACCCAACAGCCATGCCACCAGTGTGGGACCATGGAGGACCTCTGCAGCAAGTTGCCTATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
||
| CDS CCA 90 bp | TGGGCTTGTAATGCAGCTTGCCGTGGGCTACCAGCTCCTGCATGCTaGGGAAACTCTCAGTGCAGCTCAGCGCGGAGCATCGGAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WACNAACRGLPAPAC*GNSQCSSARSIGRV Trigger: AACTCTTCCGATGCTCCGCGCTGAGCTGCACTGAGAGTTTCCCCAGCATGCAGGAGCTGGTAGCCCACGGCAAGCTGCATTACAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS-3UTR CAA 90 bp | ATTCGCAAGGCCCACACAGGGCATAGGAATGAAGGCCCCTCCACCCTGCCCTGGGAGCATCGGAAGAGTTaGCCTTCCAGTGACTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IRKAHTGHRNEGPSTLPWEHRKS*PSSDCV Trigger: CACACAGTCACTGGAAGGCAAACTCTTCCGATGCTC...CCAGGGCAGGGTGGAGGGGCCTTCATTCCTATGCCCTGTGTGGGCCTTGCGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACAGGCACTGCTGCTTTCCAGCATTCGCAAGGCCCACACAGGGCATAGGAGAGCATCGGAAGAGTTaGCCTTCCAGTGACTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RDRHCCFPAFARPTQGIGEHRKS*PSSDCV Trigger: CACACAGTCACTGGAAGGCAAACTCTTCCGATGCTC...TCCTATGCCCTGTGTGGGCCTTGCGAATGCTGGAAAGCAGCAGTGCCTGTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS TCA 90 bp | AGAGTGAACGGTGAGTGCGGAAGCGCAGGAGGCAATTCTCACACTTaGAGTAGCGGTTGGGCTTGTAATGCAGCTTGCCGTGGGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: RVNGECGSAGGNSHT*SSGWACNAACRGLP Trigger: TGGTAGCCCACGGCAAGCTGCATTACAAGCCCAACCGCTACTTCAAGTGTGAGAATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 90 bp | GAGCATCGGAAGAGTTTGCCTTCCAGTGACTGTGTGGGTGGGCAGTaGGTACGGAGATGCTGTGCTAGATCACGAACACTGGGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: EHRKSLPSSDCVGGQ*VRRCCARSRTLGKL Trigger: CAGTTTCCCCAGTGTTCGTGATCTAGCACAGCATCTCCGTACCCACTGCCCACCCACACAGTCACTGGAAGGCAAACTCTTCCGATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS TCA 90 bp | GCGGGGCTGGGTTCTGACCATGGTCTATACAAACATGCAGATGCTTaGAGAGTGAACGGTGAGTGCGGAAGCGCAGGAGGCAATTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGLGSDHGLYKHADA*RVNGECGSAGGNSH Trigger: GTGAGAATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTGCATGTTTGTATAGACCATGGTCAGAACCCAGCCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS TCA 90 bp | TGGGTTCTGACCATGGTCTATACAAACATGCAGATGCTTGAAGAGTaGACGGTGAGTGCGGAAGCGCAGGAGGCAATTCTCACACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WVLTMVYTNMQMLEE*TVSAEAQEAILTLE Trigger: TTCAAGTGTGAGAATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTGCATGTTTGTATAGACCATGGTCAGAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 72 bp | GCTGGATGCTGGTGGCCCTGGAGTGGCAGCCAGGAATaGGCGCAGTCGAGGGGGACTCAGGCCAAAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGCWWPWSGSQE*AQSRGTQAKGC Trigger: GCACCCTTTGGCCTGAGTCCCCCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 72 bp | GCAGCAGCCGGGGCTAGAGCAGGGTATTTGTTTCCCTaGCGGTGGACGGCGTCTGGGCAACCGAAGGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGARAGYLFP*RWTASGQPKVL Trigger: GAGGACCTTCGGTTGCCCAGACGCCGTCCACCGCCAGGGAAACAAATACCCTGCTCTAGCCCCGGCTGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 72 bp | CTTCTTCCAGATGGCAGTGCTGGATGCTGGTGGCCCTaGAGTGGCAGCCAGGAATGGGCGCAGTCGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPDGSAGCWWP*SGSQEWAQSRG Trigger: CCCCCTCGACTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS CCA 72 bp | GAATGGCAGGCCCAGGGAAGACGAAGGGTCGGACTCTaGGGGACGCTCGGGTACAGGTGGCTCTTTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EWQAQGRRRVGL*GTLGYRWLFVQ Trigger: CTGGACAAAGAGCCACCTGTACCCGAGCGTCCCCCAGAGTCCGACCCTTCGTCTTCCCTGGGCCTGCCATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
||
| CDS GCA 72 bp | AGCGCCTTGACTCTTCTTCCAGATGGCAGTGCTGGATaGTGGTGGCCCTGGAGTGGCAGCCAGGAATGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SALTLLPDGSAG*WWPWSGSQEWA Trigger: CGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
||
| CDS CCA 72 bp | CTGGAGATGCCACCTCCTTGTCTGGCTCACCGGAGCTaGATTCTACAGTGGTCAGCGTGTCCGAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LEMPPPCLAHRS*ILQWSACPSWA Trigger: GGCCCAGCTCGGACACGCTGACCACTGTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CCA 72 bp | GCCGGGGCTAGAGCAGGGTATTTGTTTCCCTGGCGGTaGACGGCGTCTGGGCAACCGAAGGTCCTCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: AGARAGYLFPWR*TASGQPKVLIG Trigger: ACCAATGAGGACCTTCGGTTGCCCAGACGCCGTCCACCGCCAGGGAAACAAATACCCTGCTCTAGCCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS CCA 72 bp | GCCTTGACTCTTCTTCCAGATGGCAGTGCTGGATGCTaGTGGCCCTGGAGTGGCAGCCAGGAATGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ALTLLPDGSAGC*WPWSGSQEWAQ Trigger: CTGCGCCCATTCCTGGCTGCCACTCCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS TCA 72 bp | GCTCAGCGCGGAGCATCGGAAGAGTTTGCCTTCCAGTaGCTGTGTGGGTGGGCAGTGGGTACGGAGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: AQRGASEEFAFQ*LCGWAVGTEML Trigger: CAGCATCTCCGTACCCACTGCCCACCCACACAGTCACTGGAAGGCAAACTCTTCCGATGCTCCGCGCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS CCA 72 bp | CTCCACGGAGGAAAAAGTGGCTGGAGCTGCCCCATCTaGAGATGCCACCTCCTTGTCTGGCTCACCGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LHGGKSGWSCPI*RCHLLVWLTGA Trigger: AGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CCA 72 bp | GTTAGGGCTGGGCTCCTCCACGGAGGAAAAAGTGGCTaGAGCTGCCCCATCTGGAGATGCCACCTCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VRAGLLHGGKSG*SCPIWRCHLLV Trigger: GACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCAGCCACTTTTTCCTCCGTGGAGGAGCCCAGCCCTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CCA 72 bp | AACTTGCTGCAGAGGTCCTCCATGGTCCCACACTGGTaGCATGGCTGTTGGGTTAGGGCTGGGCTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NLLQRSSMVPHW*HGCWVRAGLLH Trigger: GTGGAGGAGCCCAGCCCTAACCCAACAGCCATGCCACCAGTGTGGGACCATGGAGGACCTCTGCAGCAAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CCA 72 bp | AATGCAGCTTGCCGTGGGCTACCAGCTCCTGCATGCTaGGGAAACTCTCAGTGCAGCTCAGCGCGGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: NAACRGLPAPAC*GNSQCSSARSI Trigger: GATGCTCCGCGCTGAGCTGCACTGAGAGTTTCCCCAGCATGCAGGAGCTGGTAGCCCACGGCAAGCTGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS CAA 90 bp | CGCATCAGAGCCACCCTGAGGTCTTCTGGGACTACTGGTAGCGCCTaGACTCTTCTTCCAGATGGCAGTGCTGGATGCTGGTGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RIRATLRSSGTTGSA*TLLPDGSAGCWWPW Trigger: CCAGGGCCACCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGCGCTACCAGTAGTCCCAGAAGACCTCAGGGTGGCTCTGATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS CCA 72 bp | TGGAGCTGCCCCATCTGGAGATGCCACCTCCTTGTCTaGCTCACCGGAGCTGGATTCTACAGTGGTCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: WSCPIWRCHLLV*LTGAGFYSGQR Trigger: ACGCTGACCACTGTAGAATCCAGCTCCGGTGAGCCAGACAAGGAGGTGGCATCTCCAGATGGGGCAGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CCA 72 bp | AGGTCCTCCATGGTCCCACACTGGTGGCATGGCTGTTaGGTTAGGGCTGGGCTCCTCCACGGAGGAAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RSSMVPHWWHGC*VRAGLLHGGKS Trigger: ACTTTTTCCTCCGTGGAGGAGCCCAGCCCTAACCCAACAGCCATGCCACCAGTGTGGGACCATGGAGGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073570.12 |
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| CDS CAA 72 bp | GCCACCCTGAGGTCTTCTGGGACTACTGGTAGCGCCTaGACTCTTCTTCCAGATGGCAGTGCTGGATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATLRSSGTTGSA*TLLPDGSAGCW Trigger: CCAGCATCCAGCACTGCCATCTGGAAGAAGAGTCAAGGCGCTACCAGTAGTCCCAGAAGACCTCAGGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 |
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| CDS TCA 72 bp | GGTGAGTGCGGAAGCGCAGGAGGCAATTCTCACACTTaGAGTAGCGGTTGGGCTTGTAATGCAGCTTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: GECGSAGGNSHT*SSGWACNAACR Trigger: ACGGCAAGCTGCATTACAAGCCCAACCGCTACTTCAAGTGTGAGAATTGCCTCCTGCGCTTCCGCACTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS CCA 72 bp | AAGAGTTTGCCTTCCAGTGACTGTGTGGGTGGGCAGTaGGTACGGAGATGCTGTGCTAGATCACGAACACTG | + |
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Preference number: 6 (lower is better) Translates to: KSLPSSDCVGGQ*VRRCCARSRTL Trigger: CAGTGTTCGTGATCTAGCACAGCATCTCCGTACCCACTGCCCACCCACACAGTCACTGGAAGGCAAACTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS TCA 72 bp | GGTTCTGACCATGGTCTATACAAACATGCAGATGCTTaGAGAGTGAACGGTGAGTGCGGAAGCGCAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSDHGLYKHADA*RVNGECGSAGG Trigger: GCCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTGCATGTTTGTATAGACCATGGTCAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS TCA 72 bp | ACCATGGTCTATACAAACATGCAGATGCTTGAAGAGTaGACGGTGAGTGCGGAAGCGCAGGAGGCAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: TMVYTNMQMLEE*TVSAEAQEAIL Trigger: GAGAATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTGCATGTTTGTATAGACCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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| CDS TCA 72 bp | TCTATACAAACATGCAGATGCTTGAAGAGTGAACGGTaGGTGCGGAAGCGCAGGAGGCAATTCTCACACTTG | + |
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Preference number: 6 (lower is better) Translates to: SIQTCRCLKSER*VRKRRRQFSHL Trigger: CAAGTGTGAGAATTGCCTCCTGCGCTTCCGCACTCACCGTTCACTCTTCAAGCATCTGCATGTTTGTATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073570.12 ENSMUST00000166627.8 ENSMUST00000170225.3 |
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