Pregenerated sensors for ZFP408 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075040Ensembl transcript IDs: ENSMUST00000099714.10, ENSMUST00000111333.2, ENSMUST00000145582.8
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGCAGTCTTCCCTCCTGCACCAAACTGGTCCAAGTGGAACTTTaGTGCCGGGGACAGATGGCTCCGCACGGGGCTAACGAGAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LCSLPSCTKLVQVEL*CRGQMAPHGANEKS Trigger: GGACTTCTCGTTAGCCCCGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR CCA 90 bp | TGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAACTGGTCCAAGTaGAACTTTGCTGCCGGGGACAGATGGCTCCGCACGGGGCTAACG | + |
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Preference number: 1 (lower is better) Translates to: CHHSAVFPPAPNWSK*NFAAGDRWLRTGLT Trigger: CGTTAGCCCCGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR CCA 90 bp | AGGACGCATTGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAACTaGTCCAAGTGGAACTTTGCTGCCGGGGACAGATGGCTCCGCACG | + |
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Preference number: 1 (lower is better) Translates to: RTHCHHSAVFPPAPN*SKWNFAAGDRWLRT Trigger: CGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR TCA 90 bp | GTCAGCTGGGTTCCTGCACCTCTCTGGAGACCCAAAGAGAATGAATaGCACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VSWVPAPLWRPKENE*HPLCCTSLHGELLQ Trigger: CTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGTCATTCATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAACCCAGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 90 bp | GGAGACTGTGGGCGCAGCAGCAACTCAAAGCCTGGCAGTATAGTCTaGTCCACCTGCAGGTGTAGCTTCTCCCTGATCCAGACCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GDCGRSSNSKPGSIV*STCRCSFSLIQTKD Trigger: GTCCTTGGTCTGGATCAGGGAGAAGCTACACCTGCAGGTGGACCAGACTATACTGCCAGGCTTTGAGTTGCTGCTGCGCCCACAGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR GCA 90 bp | ATCCAGACCAAGGACGCATTGCCATCACTCTGCAGTCTTCCCTCCTaGACCAAACTGGTCCAAGTGGAACTTTGCTGCCGGGGACAGATG | + |
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Preference number: 1 (lower is better) Translates to: IQTKDALPSLCSLPS*TKLVQVELCCRGQM Trigger: CATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR GCA 90 bp | TGTAGCTTCTCCCTGATCCAGACCAAGGACGCATTGCCATCACTCTaGAGTCTTCCCTCCTGCACCAAACTGGTCCAAGTGGAACTTTGC | + |
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Preference number: 1 (lower is better) Translates to: CSFSLIQTKDALPSL*SLPSCTKLVQVELC Trigger: GCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR TCA 90 bp | TCAGACACACCAAAAGAGGATATTGGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPKEDIGSHYRWL*ATMWLLGIELRTSG Trigger: TCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATATCCTCTTTTGGTGTGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 90 bp | ATATTGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGTGTTCTTAACCTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: ILDPITDGCEPPCGC*ELNSGPLEVFLTSE Trigger: CTCGGAGGTTAAGAACACTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 90 bp | CATGAATACACTGTAGCTGTCTTCAGACACACCAAAAGAGGATATTaGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: HEYTVAVFRHTKRGY*IPLQMVVSHHVVAG Trigger: CCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATATCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTGTATTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CAA 90 bp | AGCCTGGCTCAAAGTATGCTCCTGTTGTCACCGCTGGGGAGGCCCTaGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: SLAQSMLLLSPLGRP*APPRSHHPIVTTPM Trigger: CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCCCAGCGGTGACAACAGGAGCATACTTTGAGCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTACACACACACACACACACACACACACACACACACGCGCATGCGCGCGTCTGCCTCTGTTTGTGTaGTGGGATACCAGGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLTHTHTHTHTHTRACARLPLFV*WDTRGV Trigger: CACACCCCTGGTATCCCAGCACACAAACAGAGGCAG...ACGCGCGCATGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CAA 90 bp | CAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTaGTGTGCTGGGATACCAGGGGTGTGTCACTATGAGCCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: QSMMASDLRQPFCLC*CAGIPGVCHYEPVW Trigger: CCAGACAGGCTCATAGTGACACACCCCTGGTATCCCAGCACACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CAA 90 bp | TCCACCTGCAGGTGTAGCTTCTCCCTGATCCAGACCAAGGACGCATaGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAACTGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: STCRCSFSLIQTKDA*PSLCSLPSCTKLVQ Trigger: TTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACCTGCAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR TCA 90 bp | TTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCCCAGCTCACTGCCTACTCAGGGGTGTGTCACTATaGGCCTGTCTGGCTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: LSSLLHLAPSPSPAHCLLRGVSL*ACLAHP Trigger: GGGATGAGCCAGACAGGCTCATAGTGACACACCCCT...GAGTAGGCAGTGAGCTGGGGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGACTCTTCTGCGGAGACTGTGGGCGCAGCAGCAACTCAAAGCCTGGCAGTAGGTGTAGCTTCTCCCTaGTCCAGACCAAGGACGCAT | + |
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Preference number: 2 (lower is better) Translates to: LDSSAETVGAAATQSLAVGVASP*SRPRTH Trigger: ATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACC...TACTGCCAGGCTTTGAGTTGCTGCTGCGCCCACAGTCTCCGCAGAAGAGTCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCTGGATTCACGGGGAGCTCTTaGAGGGGTAAAGGAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: MCGLTPRSQSAGFLHLSGFTGSS*RGKGRV Trigger: CACCCTTCCTTTACCCCTGCAAGAGCTCCCCGTGAA...TCCAGAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGCCTCTGTTTGTGTGCTaGGATACCAGGGGTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMPLFVC*DTRGVS Trigger: TGACACACCCCTGGTATCCCAGCACACAAACAGAGG...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCCCAGCTCACTGCCTACTCAGTCAGCTGGGTTCCTaGACCTCTCTGGAGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSSLLHLAPSPSPAHCLLSQLGS*TSLETQ Trigger: TTGGGTCTCCAGAGAGGTGCAGGAACCCAGCTGACT...GAGTAGGCAGTGAGCTGGGGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAGACTCTTCTGCGGAGACTGTGGGCGCAGCAGCAACTCAAAGCCTGGCAGTAGACCAAGGACGCATTaGCATCACTCTGCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRLFCGDCGRSSNSKPGSRPRTH*HHSAVF Trigger: GAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCT...ACTGCCAGGCTTTGAGTTGCTGCTGCGCCCACAGTCTCCGCAGAAGAGTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGCCTGGCTCAAAGTATGCTCCTGTTGTCACCGCTGGGGAGGCCCTTGGCGTTCCTGCACCTCTCTaGAGACCCAAAGAGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: SKPGSKYAPVVTAGEALGVPAPL*RPKENE Trigger: TTCATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAAC...GCCAAGGGCCTCCCCAGCGGTGACAACAGGAGCATACTTTGAGCCAGGCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTTCCTCCAGCTTGGGGTGCAGGACACTTAGACTCTTCTGCGGAGACTGTCCAAACTGGTCCAAGTaGAACTTTGCTGCCGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TSSSSLGCRTLRLFCGDCPNWSK*NFAAGD Trigger: GTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGG...ACAGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGCTCAGTGAATCACAGGCTTTGTAAAGGCCAACCTCTTCTCCCTCCCTCCTTCACGGGGAGCTCTTaGAGGGGTAAAGGAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: YSSVNHRLCKGQPLLPPSFTGSS*RGKGRV Trigger: CACCCTTCCTTTACCCCTGCAAGAGCTCCCCGTGAA...GGAGGGAGGGAGAAGAGGTTGGCCTTTACAAAGCCTGTGATTCACTGAGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGAGTCAGCTGGGTTCCTaGACCTCTCTGGAGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: YTVHDGLRLEATLLPLFVSQLGS*TSLETQ Trigger: TTGGGTCTCCAGAGAGGTGCAGGAACCCAGCTGACT...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCCTCATAGCTTCCCTGTaGCCAAGCCTACAGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VCHYEPVWLIPNISHCLGLIASL*PSLQSA Trigger: TGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAG...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGTGTTCTTAACCTCCGAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWE*NSGPLEVFLTSEAA Trigger: AGCTGCCTCGGAGGTTAAGAACACTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGCTACGCATTTATTTCTaGTCTATCCCTACAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMLRIYF*SIPTAQ Trigger: CTGAGCTGTAGGGATAGATCAGAAATAAATGCGTAG...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCTGCCTCTGTTTGTGTaGTGGGATACCAGGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTLPLFV*WDTRGV Trigger: CACACCCCTGGTATCCCAGCACACAAACAGAGGCAG...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTTTGAGGCAACCCTTCTaGCTCTGTTTGTGTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTLRQPF*LCLCAG Trigger: CCCAGCACACAAACAGAGGCAGAAGGGTTGCCTCAA...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCTCCTGCACCAAACTGGTCCAAGTGGAACTTTGCTGCCGGGGACAGATGAAGTCCTTTGTCTCTaGCAACACAGTAGGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: SSLLHQTGPSGTLLPGTDEVLCL*QHSRNS Trigger: TGAATTCCTACTGTGTTGGCAGAGACAAAGGACTTC...ATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGAATTGAACTCAGGACCTCTGGAAGTGTTCTTAACCTCCGAGGCAGCTCTCGTTCCTGCACCTCTCTaGAGACCCAAAGAGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: WELNSGPLEVFLTSEAALVPAPL*RPKENE Trigger: TTCATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAAC...GAGAGCTGCCTCGGAGGTTAAGAACACTTCCAGAGGTCCTGAGTTCAATTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTAATTCTAGGTGTGAGCTaGCACACTCAGCCTACGCAT | + |
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Preference number: 2 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVILGVS*HTQPTH Trigger: ATGCGTAGGCTGAGTGTGTCAGCTCACACCTAGAAT...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR TCA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGATTCTAGGTGTGAGCTaGCACACTCAGCCTACGCAT | + |
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Preference number: 2 (lower is better) Translates to: NYMSIPASHRLKIHPPTKILGVS*HTQPTH Trigger: ATGCGTAGGCTGAGTGTGTCAGCTCACACCTAGAAT...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCTACGCATTTATTTCTaGTCTATCCCTACAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTLRIYF*SIPTAQ Trigger: CTGAGCTGTAGGGATAGATCAGAAATAAATGCGTAG...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR GCA 72 bp | CCCTCCTGCACCAAACTGGTCCAAGTGGAACTTTGCTaGCGGGGACAGATGGCTCCGCACGGGGCTAACGAG | + |
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Preference number: 3 (lower is better) Translates to: PSCTKLVQVELC*RGQMAPHGANE Trigger: CTCGTTAGCCCCGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR GCA 72 bp | CTTCCCTCCTGCACCAAACTGGTCCAAGTGGAACTTTaGTGCCGGGGACAGATGGCTCCGCACGGGGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LPSCTKLVQVEL*CRGQMAPHGAN Trigger: GTTAGCCCCGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR GCA 72 bp | TGCGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATaGTCCTGTTGTCACCGCTGGGGAGGCCCTTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CARSLIKAWLKV*SCCHRWGGPWH Trigger: GTGCCAAGGGCCTCCCCAGCGGTGACAACAGGAGCATACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR GCA 72 bp | ACCAAGAACAGGCAGACCAAGATAGTGCAGCACCAGTaGTGGGAGCCGACCGTCAGCACGAGTGCAACAGGC | + |
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Preference number: 3 (lower is better) Translates to: TKNRQTKIVQHQ*WEPTVSTSATG Trigger: GCCTGTTGCACTCGTGCTGACGGTCGGCTCCCAGCACTGGTGCTGCACTATCTTGGTCTGCCTGTTCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 72 bp | TCTGCAGTCTTCCCTCCTGCACCAAACTGGTCCAAGTaGAACTTTGCTGCCGGGGACAGATGGCTCCGCACG | + |
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Preference number: 3 (lower is better) Translates to: SAVFPPAPNWSK*NFAAGDRWLRT Trigger: CGTGCGGAGCCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACCCAGCCCTTCCCCAGCTCACTGCCTACTCTGGTACTCATAGCACTCTCACAAAGTATGCTCCTGTaGTCACCGCTGGGGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: STQPFPSSLPTLVLIALSQSMLL*SPLGRP Trigger: GGGCCTCCCCAGCGGTGACAACAGGAGCATACTTTG...TGAGAGTGCTATGAGTACCAGAGTAGGCAGTGAGCTGGGGAAGGGCTGGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 72 bp | AAAGCCTGGCTCAAAGTATGCTCCTGTTGTCACCGCTaGGGAGGCCCTTGGCACCACCCAGATCACATCACC | + |
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Preference number: 3 (lower is better) Translates to: KAWLKVCSCCHR*GGPWHHPDHIT Trigger: GGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCCCAGCGGTGACAACAGGAGCATACTTTGAGCCAGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 72 bp | AAGAACAGGCAGACCAAGATAGTGCAGCACCAGTGCTaGGAGCCGACCGTCAGCACGAGTGCAACAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: KNRQTKIVQHQC*EPTVSTSATGR Trigger: TCTGCCTGTTGCACTCGTGCTGACGGTCGGCTCCCAGCACTGGTGCTGCACTATCTTGGTCTGCCTGTTCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 72 bp | GGGCGCAGCAGCAACTCAAAGCCTGGCAGTATAGTCTaGTCCACCTGCAGGTGTAGCTTCTCCCTGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: GRSSNSKPGSIV*STCRCSFSLIQ Trigger: CTGGATCAGGGAGAAGCTACACCTGCAGGTGGACCAGACTATACTGCCAGGCTTTGAGTTGCTGCTGCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
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| 3UTR TCA 72 bp | GTTCCTGCACCTCTCTGGAGACCCAAAGAGAATGAATaGCACCCGCTCTGCTGCACCAGTCTTCACGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VPAPLWRPKENE*HPLCCTSLHGE Trigger: CTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGTCATTCATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR TCA 72 bp | CTGGGTTCCTGCACCTCTCTGGAGACCCAAAGAGAATaGATGACACCCGCTCTGCTGCACCAGTCTTCACGG | + |
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Preference number: 3 (lower is better) Translates to: LGSCTSLETQRE*MTPALLHQSSR Trigger: CCGTGAAGACTGGTGCAGCAGAGCGGGTGTCATTCATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| 3UTR CCA 72 bp | TGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAACTaGTCCAAGTGGAACTTTGCTGCCGGGGACAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: CHHSAVFPPAPN*SKWNFAAGDRW Trigger: CCATCTGTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| 3UTR GCA 72 bp | AGACCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTaGACAAATCCCACCCCACCCATCTCCCTACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RPHSFPVPKPTE*TNPTPPISLHC Trigger: ACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR GCA 72 bp | AAGGACGCATTGCCATCACTCTGCAGTCTTCCCTCCTaGACCAAACTGGTCCAAGTGGAACTTTGCTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: KDALPSLCSLPS*TKLVQVELCCR Trigger: CCGGCAGCAAAGTTCCACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| 3UTR GCA 72 bp | TCCCTGATCCAGACCAAGGACGCATTGCCATCACTCTaGAGTCTTCCCTCCTGCACCAAACTGGTCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLIQTKDALPSL*SLPSCTKLVQV Trigger: CACTTGGACCAGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGGATCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| 3UTR GCA 72 bp | CACACACACACACACACACACACACACACACGCGCATaGGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTRA*ARSLIKAWLKV Trigger: TACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCATGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR CCA 72 bp | TGTGATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTaGGTTCCTGCACCTCTCTGGAGACCCAAAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CDVWIDPKKPVS*VPAPLWRPKEN Trigger: ATTCTCTTTGGGTCTCCAGAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCTTTGACGAACTTCATCCATGTGATGTGTGGATaGACCCCAAGAAGCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SHPTHLPTLSPLALTNFIHVMCG*TPRSQS Trigger: TGACTGGCTTCTTGGGGTCAATCCACACATCACATG...GATGAAGTTCGTCAAAGCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTGGAAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*WELNSGPLEVF Trigger: GAACACTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGCATGTGATGTGTGGATaGACCCCAAGAAGCCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NYMSIPASHRLKIHPPTKHVMCG*TPRSQS Trigger: TGACTGGCTTCTTGGGGTCAATCCACACATCACATG...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR TCA 72 bp | CCAAAAGAGGATATTGGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PKEDIGSHYRWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATATCCTCTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR TCA 72 bp | TTTAGAATTACATGTCCATTCCTGCTTCTCACCGCTTaGAAATCCATCCACCTACCAAGAACAGGCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: FRITCPFLLLTA*KSIHLPRTGRP Trigger: TGGTCTGCCTGTTCTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAGCCCCGCTGGCGGAATaGTTGGCCACAGTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPALLHQSSRGALAGVKEAPLAE*LATVGA Trigger: TGCCCCCACTGTGGCCAAGCATTCCGCCAGCGGGGC...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGGCCGGGCTGCAGGGGTaGTCCTACACACCAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMAGLQG*SYTPDP Trigger: GGGGTCTGGTGTGTAGGAGCACCCCTGCAGCCCGGC...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTCCACCTGCAGGTGTAGCTTCTCCCTGATCCAGACCAAGGACGCATTGGCCGGGCTGCAGGGGTaGTCCTACACACCAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VWSTCRCSFSLIQTKDALAGLQG*SYTPDP Trigger: GGGGTCTGGTGTGTAGGAGCACCCCTGCAGCCCGGC...CAATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACCTGCAGGTGGACCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGGAAGGGCTCCATCCTaGATCCTGGCCCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEALGTTQITSPYRNNSHGRAPS*ILAQGW Trigger: CCACCCCTGGGCCAGGATTCAGGATGGAGCCCTTCC...ATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
||
| CDS-3UTR TCA 90 bp | ACACTTAGACTCTTCTGCGGAGACTGTGGGCGCAGCAGCAACTCAAAGCCTGGCGGAAGGGCTCCATCCTaGATCCTGGCCCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRLFCGDCGRSSNSKPGGRAPS*ILAQGW Trigger: CCACCCCTGGGCCAGGATTCAGGATGGAGCCCTTCC...GCCAGGCTTTGAGTTGCTGCTGCGCCCACAGTCTCCGCAGAAGAGTCTAAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTGCACAAATCCCACCCCACCCGGCCGTACACCACGGTaGCCCAGCATGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHSFPVPKPTECTNPTPPGRTPR*PSMWPL Trigger: CAAAGGCCACATGCTGGGCCACCGTGGTGTACGGCC...GGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGCTTGGGGTGCAGGACACTTAGACTCTTCTGCGGAGACTGTGGGCGCATCCTTAGAACAAGGATaGCAGGGCTCGTACCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPAWGAGHLDSSAETVGASLEQG*QGSYPA Trigger: CGCCGGGTACGAGCCCTGCCATCCTTGTTCTAAGGA...TGCGCCCACAGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATTGGGCATGGGCATGGTaGAGGGGCATCTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEALGTTQITSPYRNNSHWAWAW*RGIWHL Trigger: CAGATGCCAGATGCCCCTTCACCATGCCCATGCCCA...ATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTGGGCATGGGCATGGTaGAGGGGCATCTGGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGPAFIFFTPPSTQPWAWAW*RGIWHL Trigger: CAGATGCCAGATGCCCCTTCACCATGCCCATGCCCA...GGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCGAAACCCCACACTGGTaGCTGAGCTGGTGCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGPAFIFFTPPSTQPETPHW*LSWCRL Trigger: CAAGCGGCACCAGCTCAGTCACCAGTGTGGGGTTTC...GGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTACACACACACACACACACACACACACACACACACGCGCATGCGCGCGTCCTGCTGAATCCTCTTaGGGGGAGGCCACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTHTHTHTHTHTRACARPAESS*GEATSS Trigger: GGAAGAGGTGGCCTCCCCGCAAGAGGATTCAGCAGG...ACGCGCGCATGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCCAGCCCTTCCCCAGCTCACTGCCTACTCTGGTACTCATAGCACTCTCATCTGGGCAGCTGAGGTaGTCTGAGGCTCAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STQPFPSSLPTLVLIALSSGQLR*SEAQVE Trigger: CTCCACCTGAGCCTCAGAGCACCTCAGCTGCCCAGA...TGAGAGTGCTATGAGTACCAGAGTAGGCAGTGAGCTGGGGAAGGGCTGGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCGCCCCGCTGGCGGAATaGTTGGCCACAGTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCHYEPVWLIPNISHCLGAPLAE*LATVGA Trigger: TGCCCCCACTGTGGCCAAGCATTCCGCCAGCGGGGC...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CCAGACCAAGGACGCATTGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAACTCTCCATCCTGAATCCTaGCCCAGGGGTGGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDQGRIAITLQSSLLHQTLHPES*PRGGSG Trigger: CCCAGAGCCACCCCTGGGCCAGGATTCAGGATGGAG...AGTTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| CDS-3UTR CCA 90 bp | GCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATGCTCCTGTTGTCACCGCTGGGGCCGTACACCACGGTaGCCCAGCATGTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLIKAWLKVCSCCHRWGRTPR*PSMWPL Trigger: CAAAGGCCACATGCTGGGCCACCGTGGTGTACGGCC...CCAGCGGTGACAACAGGAGCATACTTTGAGCCAGGCTTTGATGAGTGAACGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTGCACAAATCCCACCCCACCCGGGGCATCTGGCATCTaGTGGGTCTTTCGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHSFPVPKPTECTNPTPPGASGI*WVFRCS Trigger: GCTACACCGAAAGACCCACCAGATGCCAGATGCCCC...GGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCAAGCCCACGTCCTTGTaGATCAGGACCAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSPGPAFIFFTPPSTQPKPTSL*IRTRLG Trigger: CCCCAGCCTGGTCCTGATCCACAAGGACGTGGGCTT...GGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAGGTGTAGCTTCTCCCTaGTCCAGACCAAGGACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPALLHQSSRGALAGVKEGVASP*SRPRTH Trigger: ATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACC...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCCTGGGTCCAGAGGGCTaGAGAGCAGCCCAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSLGPEG*RAAQTG Trigger: ACCTGTCTGGGCTGCTCTGCAGCCCTCTGGACCCAG...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | AACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCCTCCATCCTGAATCCTaGCCCAGGGGTGGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRGSSPGPAFIFFTPPSLHPES*PRGGSG Trigger: CCCAGAGCCACCCCTGGGCCAGGATTCAGGATGGAG...GCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTGCACAAATCCCACCCCACCCCCAAACTGGTCCAAGTaGAACTTTGCTGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHSFPVPKPTECTNPTPPPNWSK*NFAAGD Trigger: GTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGG...GGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGGGTGTAGCTTCTCCCTaGTCCAGACCAAGGACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMGVASP*SRPRTH Trigger: ATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACC...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGGCTCTTCTGGGCAGCTaGGGTGCTCTGAGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVHDGLRLEATLLPLFVALLGS*GALRLR Trigger: CCTGAGCCTCAGAGCACCTCAGCTGCCCAGAAGAGC...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGACACTTAGACTCTTCTaGGGAGACTGTGGGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMTLRLF*GDCGRS Trigger: GCTGCGCCCACAGTCTCCGCAGAAGAGTCTAAGTGT...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCCCTGCTGAATCCTCTTaGGGGGAGGCCACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSPAESS*GEATSS Trigger: GGAAGAGGTGGCCTCCCCGCAAGAGGATTCAGCAGG...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTTACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGCTGGGTCCAGAGGGCTaGAGAGCAGCCCAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTQSMMASDLRQPFCLCLLGPEG*RAAQTG Trigger: ACCTGTCTGGGCTGCTCTGCAGCCCTCTGGACCCAG...CAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAGTGTGCACAAACGCGTaGTTCTTCAGATGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPALLHQSSRGALAGVKEVCTNA*FFRWHS Trigger: GCTGTGCCATCTGAAGAAGCACGCGTTTGTGCACAC...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAGGCTTGTGGTCTGTGTaGACAAACGCGTGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPALLHQSSRGALAGVKEGLWSV*TNACFF Trigger: GAAGAAGCACGCGTTTGTGCACACAGACCACAAGCC...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCCAGCCCTTCCCCAGCTCACTGCCTACTCTGGTACTCATAGCACTCTCAGGGCTAGGGGCTGGCTaGTCTGGTACTATAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: STQPFPSSLPTLVLIALSGLGAG*SGTIKH Trigger: GTGCTTTATAGTACCAGAGCAGCCAGCCCCTAGCCC...TGAGAGTGCTATGAGTACCAGAGTAGGCAGTGAGCTGGGGAAGGGCTGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGCCCACGGCCAAGCCCTaGGGGAGGCTCCTTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YTVHDGLRLEATLLPLFVPTAKP*GRLLRT Trigger: TGTTCTAAGGAGCCTCCCCCAGGGCTTGGCCGTGGG...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
||
| CDS-3UTR CCA 90 bp | CCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTGCACAAATCCCACCCCACCCGCGTGCTTCTTCAGATaGCACAGCTGTAGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHSFPVPKPTECTNPTPPACFFR*HSCRNA Trigger: GGCATTCCTACAGCTGTGCCATCTGAAGAAGCACGC...GGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAACACAGGAAAGGCTTGTaGTCTGTGTGCACAAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPALLHQSSRGALAGVKEHRKGL*SVCTNA Trigger: CGCGTTTGTGCACACAGACCACAAGCCTTTCCTGTG...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCAAGCCCACGTCCTTGTaGATCAGGACCAGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSKPTSL*IRTRLG Trigger: CCCCAGCCTGGTCCTGATCCACAAGGACGTGGGCTT...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCCCTGAGTGGACCACCTaGTGTTCCCTGAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSPEWTT*CSLRSL Trigger: CAGAGACCTCAGGGAACATCAGGTGGTCCACTCAGG...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGAAAGGGCCGGGCACCTaGGTGGACCACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTVHDGLRLEATLLPLFVKGPGT*VDHLMF Trigger: GAACATCAGGTGGTCCACTCAGGTGCCCGGCCCTTT...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAATTGAACTCAGGACCTCTGGAAGTGTTCTTAACCTCCGAGGCAGCTCTCCTCCAGTGTGGGAGATaGGATGGCGCCGCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WELNSGPLEVFLTSEAALLQCGR*DGAAVQ Trigger: CTGAACTGCGGCGCCATCTCATCTCCCACACTGGAG...GAGAGCTGCCTCGGAGGTTAAGAACACTTCCAGAGGTCCTGAGTTCAATTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCGAAACCCCACACTGGTaGCTGAGCTGGTGCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCHYEPVWLIPNISHCLGETPHW*LSWCRL Trigger: CAAGCGGCACCAGCTCAGTCACCAGTGTGGGGTTTC...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCGGAGAACATAGCCCATaGCACAGATGGGGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQAQLLSSLLHLAPSPSGEHSP*HRWGTG Trigger: ACCAGTGCCCCATCTGTGGCATGGGCTATGTTCTCC...GGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCGGAGAACATAGCCCATaGCACAGATGGGGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CDVWIDPKKPVSWVPAPLGEHSP*HRWGTG Trigger: ACCAGTGCCCCATCTGTGGCATGGGCTATGTTCTCC...GAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCACGGGCACTGACTGCTaGGGACATCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDVWIDPKKPVSWVPAPLTGTDC*GHLTAW Trigger: CCAAGCAGTTAGATGTCCCCAGCAGTCAGTGCCCGT...GAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCCGGTGGCCCAGCATGTaGCCTTTGAAGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQAQLLSSLLHLAPSPSRWPSM*PLKLSS Trigger: TGAGGAAAGCTTCAAAGGCCACATGCTGGGCCACCG...GGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCTTTGACGAACTTCATCCCTGAGTGGACCACCTaGTGTTCCCTGAGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHPTHLPTLSPLALTNFIPEWTT*CSLRSL Trigger: CAGAGACCTCAGGGAACATCAGGTGGTCCACTCAGG...GATGAAGTTCGTCAAAGCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCGCTGTAGGAATGCCTTaGTACACTCCCCACACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRGSSPGPAFIFFTPPSAVGMP*YTPHTG Trigger: ACCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGC...GCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGTCCTTAGAACAAGGATaGCAGGGCTCGTACCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YTVHDGLRLEATLLPLFVSLEQG*QGSYPA Trigger: CGCCGGGTACGAGCCCTGCCATCCTTGTTCTAAGGA...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCCCAAACTGGTCCAAGTaGAACTTTGCTGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSPNWSK*NFAAGD Trigger: GTCCCCGGCAGCAAAGTTCCACTTGGACCAGTTTGG...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCGCGTGCTTCTTCAGATaGCACAGCTGTAGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALQAQLLSSLLHLAPSPSACFFR*HSCRNA Trigger: GGCATTCCTACAGCTGTGCCATCTGAAGAAGCACGC...GGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCCGGTGGCCCAGCATGTaGCCTTTGAAGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSRWPSM*PLKLSS Trigger: TGAGGAAAGCTTCAAAGGCCACATGCTGGGCCACCG...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAAGTGTGGGAGATGAGATaGCGCCGCAGTTCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKVWEMR*RRSSGS Trigger: GCTGCCTGAACTGCGGCGCCATCTCATCTCCCACAC...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR CAA 72 bp | AGGTGTAGCTTCTCCCTGATCCAGACCAAGGACGCATaGCCATCACTCTGCAGTCTTCCCTCCTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCSFSLIQTKDA*PSLCSLPSCTK Trigger: TTTGGTGCAGGAGGGAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTGGATCAGGGAGAAGCTACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145582.8 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACGCGCATGCGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATGGCTTTCAGAGATGGTaGCCTCCACAATACCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHAHARVHSSKPGSKYGFQRW*PPQYPH Trigger: GTGAGGGTATTGTGGAGGTCACCATCTCTGAAAGCC...ATACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCATGCGCGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCAGACCAAGGACGCATTaGCATCACTCTGCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CDVWIDPKKPVSWVPAPLRPRTH*HHSAVF Trigger: GAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCT...GAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAATCAGGTGCCTGCTTCTaGTTCTACCACCTCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKSGACF*FYHLGP Trigger: TGGGCCGAGGTGGTAGAAGCAGAAGCAGGCACCTGA...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCCCTGGCAGTATAGTCTaGTCCACCTGCAGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCHYEPVWLIPNISHCLGPGSIV*STCRCS Trigger: GCTACACCTGCAGGTGGACCAGACTATACTGCCAGG...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGCCTGGCAGTATAGTCTaGTCCACCTGCAGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQSMMASDLRQPFCLCLPGSIV*STCRCS Trigger: GCTACACCTGCAGGTGGACCAGACTATACTGCCAGG...CAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACGCGCATGCGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATCTTCTTCCTCCAGCTTaGGGTGCAGGACACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHAHARVHSSKPGSKYLLPPA*GAGHLD Trigger: GTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAG...ATACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCATGCGCGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTTACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGACGGGCACTGACTGCTaGGGACATCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQSMMASDLRQPFCLCLTGTDC*GHLTAW Trigger: CCAAGCAGTTAGATGTCCCCAGCAGTCAGTGCCCGT...CAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGTCCATGATGGCCTCAGACTTGAGGCAACCCTTCTGCCTCTGTTTGTGAAGGTTTTGCCGCATTaGTCACACACAAAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVHDGLRLEATLLPLFVKVLPH*SHTKGR Trigger: CCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTT...CACAAACAGAGGCAGAAGGGTTGCCTCAAGTCTGAGGCCATCATGGACTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAAGGGCTAGGGGCTGGCTaGTCTGGTACTATAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKGLGAG*SGTIKH Trigger: GTGCTTTATAGTACCAGAGCAGCCAGCCCCTAGCCC...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTGCTATAGACGGGCACTaGCTGCTGGGGACATCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTAIDGH*LLGTSN Trigger: GTTAGATGTCCCCAGCAGTCAGTGCCCGTCTATAGC...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TCTCACTTCACTAAGGCATCTCCCGACCACCTCTTTAGAATTACATGTCCATTCAAAGGGCCGGGCACCTaGGTGGACCACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHFTKASPDHLFRITCPFKGPGT*VDHLMF Trigger: GAACATCAGGTGGTCCACTCAGGTGCCCGGCCCTTT...GAATGGACATGTAATTCTAAAGAGGTGGTCGGGAGATGCCTTAGTGAAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTACTCCAGTGTGGGAGATaGGATGGCGCCGCAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVLQCGR*DGAAVQ Trigger: CTGAACTGCGGCGCCATCTCATCTCCCACACTGGAG...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAAGGCTTTCAGAGATGGTaGCCTCCACAATACCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKGFQRW*PPQYPH Trigger: GTGAGGGTATTGTGGAGGTCACCATCTCTGAAAGCC...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTATCTGGGCAGCTGAGGTaGTCTGAGGCTCAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVSGQLR*SEAQVE Trigger: CTCCACCTGAGCCTCAGAGCACCTCAGCTGCCCAGA...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTGCTGTAGGAATGCCTTaGTACACTCCCCACACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTAVGMP*YTPHTG Trigger: ACCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGC...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACGCGCATGCGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATAGGGGCTGGCTGCTCTaGTACTATAAAGCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: THTHAHARVHSSKPGSKYRGWLL*YYKALF Trigger: GAAAAGTGCTTTATAGTACCAGAGCAGCCAGCCCCT...ATACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCATGCGCGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAAAGACCAAGGACGCATTaGCATCACTCTGCAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKRPRTH*HHSAVF Trigger: GAAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCT...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGTCAGGTGCCTGCTTCTaGTTCTACCACCTCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NYMSIPASHRLKIHPPTKSGACF*FYHLGP Trigger: TGGGCCGAGGTGGTAGAAGCAGAAGCAGGCACCTGA...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCTTCTTCCTCCAGCTTaGGGTGCAGGACACTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTLLPPA*GAGHLD Trigger: GTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAG...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTAGGGGCATCTGGCATCTaGTGGGTCTTTCGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVGASGI*WVFRCS Trigger: GCTACACCGAAAGACCCACCAGATGCCAGATGCCCC...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTAGCTATAGACGGGCACTaGCTGCTGGGGACATCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVAIDGH*LLGTSN Trigger: GTTAGATGTCCCCAGCAGTCAGTGCCCGTCTATAGC...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGAGTGCACAAATCCCACCCCACCCATCTCCCTACACTGTCTCCTTTAGCGTTGCTCTTCGGTTTTaGTCACAGATTCAGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: LQSAQIPPHPSPYTVSFSVALRF*SQIQRL Trigger: TAGTCTCTGAATCTGTGACCAAAACCGAAGAGCAAC...GCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTGGGATTTGTGCACTCTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGGTGTGCACAAACGCGTaGTTCTTCAGATGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NYMSIPASHRLKIHPPTKVCTNA*FFRWHS Trigger: GCTGTGCCATCTGAAGAAGCACGCGTTTGTGCACAC...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACTTCACTAAGGCATCTCCCGACCACCTCTTTAGAATTACATGTCCATTCAAGGTTTTGCCGCATTaGTCACACACAAAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHFTKASPDHLFRITCPFKVLPH*SHTKGR Trigger: CCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTT...GAATGGACATGTAATTCTAAAGAGGTGGTCGGGAGATGCCTTAGTGAAGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACGCGCATGCGCGCGTTCACTCATCAAAGCCTGGCTCAAAGTATAGCATATTGTCTTCTTaGATACTATGGGATGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: THTHAHARVHSSKPGSKYSILSS*ILWDDS Trigger: CGAGTCATCCCATAGTATCCAAGAAGACAATATGCT...ATACTTTGAGCCAGGCTTTGATGAGTGAACGCGCGCATGCGCGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTACTCTGGTACTCATAGCACTCTCACTTCACTAAGGCATCTCCCGACCCTATCCTTGAAAAGTTaGTCTTCGGTTTTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TAYSGTHSTLTSLRHLPTLSLKS*SSVLVT Trigger: TGTGACCAAAACCGAAGAGCAACTTTTCAAGGATAG...GGTCGGGAGATGCCTTAGTGAAGTGAGAGTGCTATGAGTACCAGAGTAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCATCCCCAACATCTCACATTGTCTAGGCTCACAGACTTCACAGGCAAAGTTGCTCTTCGGTTTTaGTCACAGATTCAGAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: LAHPQHLTLSRLTDFTGKVALRF*SQIQRL Trigger: TAGTCTCTGAATCTGTGACCAAAACCGAAGAGCAAC...TTTGCCTGTGAAGTCTGTGAGCCTAGACAATGTGAGATGTTGGGGATGAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTCTGAACTCATATCCAATGGTTTTTCTTCTTCCTAAGGGTAGGCAGGTAAGGGGCTGGCTGCTCTaGTACTATAAAGCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLNSYPMVFLLPKGRQVRGWLL*YYKALF Trigger: GAAAAGTGCTTTATAGTACCAGAGCAGCCAGCCCCT...TACCTGCCTACCCTTAGGAAGAAGAAAAACCATTGGATATGAGTTCAGAGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR CAA 72 bp | CACCCCACCCATCTCCCTACACTGTCTCCTTTAGCTTaGACGAACTTCATCTATGAAAGCAACCAACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HPTHLPTLSPLA*TNFIYESNQLN Trigger: ATTCAGTTGGTTGCTTTCATAGATGAAGTTCGTCAAAGCTAAAGGAGACAGTGTAGGGAGATGGGTGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| 3UTR CAA 72 bp | CACTGTAGCTGTCTTCAGACACACCAAAAGAGGATATaGGATCCCATTACAGATGGTTGTGAGCCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTHQKRI*DPITDGCEPPC Trigger: ACATGGTGGCTCACAACCATCTGTAATGGGATCCAATATCCTCTTTTGGTGTGTCTGAAGACAGCTACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCTATCCTTGAAAAGTTaGTCTTCGGTTTTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTLSLKS*SSVLVT Trigger: TGTGACCAAAACCGAAGAGCAACTTTTCAAGGATAG...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTCTTAACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTAGCATATTGTCTTCTTaGATACTATGGGATGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLNLRGSSPGPAFIFFTSILSS*ILWDDS Trigger: CGAGTCATCCCATAGTATCCAAGAAGACAATATGCT...AGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTTAAGAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | TCTCACCAGTGTGGAGCCTCATGTGATTCCGCAGGGAACCCCGGGTaGCCAGGAGCCGTCCACACACTGGGCATGGGCATGGTGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHQCGASCDSAGNPG*PGAVHTLGMGMVKG Trigger: CCCCTTCACCATGCCCATGCCCAGTGTGTGGACGGCTCCTGGCCACCCGGGGTTCCCTGCGGAATCACATGAGGCTCCACACTGGTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | CGTCCACACACTGGGCATGGGCATGGTGAAGGGGCATCTGGCATCTaGTGGGTCTTTCGGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPHTGHGHGEGASGI*WVFRCSRREGRRAK Trigger: CTTTGCCCGCCGACCTTCCCTGCGGCTACACCGAAAGACCCACCAGATGCCAGATGCCCCTTCACCATGCCCATGCCCAGTGTGTGGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | TCTGCTTCTACCACCTCGGCCCAGCCACGAAAGCCCACGTCCTTGTaGATCAGGACCAGGCTGGGGCTAGGGGCTGGCTGCTCTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SASTTSAQPRKPTSL*IRTRLGLGAGCSGT Trigger: AGTACCAGAGCAGCCAGCCCCTAGCCCCAGCCTGGTCCTGATCCACAAGGACGTGGGCTTTCGTGGCTGGGCCGAGGTGGTAGAAGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS GCA 90 bp | GGGTCTTTCGGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAGGTTTTaGCGCATTGCTCACACACAAAGGGCCGGGCACCTGAGTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GSFGVAAGKVGGQRF*RIAHTQRAGHLSGP Trigger: TGGTCCACTCAGGTGCCCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTTGCCCGCCGACCTTCCCTGCGGCTACACCGAAAGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | CCACACACTGGGCATGGGCATGGTGAAGGGGCATCTGGCATCTGGTaGGTCTTTCGGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PHTGHGHGEGASGIW*VFRCSRREGRRAKV Trigger: AACCTTTGCCCGCCGACCTTCCCTGCGGCTACACCGAAAGACCCACCAGATGCCAGATGCCCCTTCACCATGCCCATGCCCAGTGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAAGCGTCGGCCCAGCTTaGAGGAGCTTCCTGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPALLHQSSRGALAGVKESVGPA*RSFLLG Trigger: ACCCAGCAGGAAGCTCCTCAAAGCTGGGCCGACGCT...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS GCA 90 bp | GCAGACGCCTCTCCTGTCTCAGCTACTTCTTCCTCCAGCTTGGGGTaGAGGACACTTAGACTCTTCTGCGGAGACTGTGGGCGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ADASPVSATSSSSLG*RTLRLFCGDCGRSS Trigger: GCTGCTGCGCCCACAGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGTAGCTGAGACAGGAGAGGCGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | GGCACTTCCTGTTGGCTACAAGTGTCCAGCAGTTCCGGCTCACTCTaGAGGAGCACCATAGGGGGCTCAGAGGCAGCAGGAGGCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GTSCWLQVSSSSGSL*RSTIGGSEAAGGRE Trigger: TTCTCTGCCTCCTGCTGCCTCTGAGCCCCCTATGGTGCTCCTCCAGAGTGAGCCGGAACTGCTGGACACTTGTAGCCAACAGGAAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 90 bp | AGCAAGGGAAGGGCCGTACACCACGGTGGCCCAGCATGTGGCCTTTaGAGCTTTCCTCAGAGCTGTAGCTCTTGCCACACTCGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SKGRAVHHGGPACGL*SFPQSCSSCHTRCT Trigger: TGTGCACCGAGTGTGGCAAGAGCTACAGCTCTGAGGAAAGCTTCAAAGGCCACATGCTGGGCCACCGTGGTGTACGGCCCTTCCCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 90 bp | CACACACAAAGGGCCGGGCACCTGAGTGGACCACCTGATGTTCCCTaGGGTCTCTGCGGGTACCATAGGCCTTGTCACACTGAGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTQRAGHLSGPPDVP*GLCGYHRPCHTESK Trigger: CTTGCTCTCAGTGTGACAAGGCCTATGGTACCCGCAGAGACCTCAGGGAACATCAGGTGGTCCACTCAGGTGCCCGGCCCTTTGTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 90 bp | TGCCACAGATGGGGCACTGGTATGGCTTGTCTGTCATGTGGGACTTaGGGTGGCGGCGCAACTTGGTGGCCAGTGTGTAAGCTCGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CHRWGTGMACLSCGT*GGGATWWPVCKLGH Trigger: GTGACCGAGCTTACACACTGGCCACCAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGACAAGCCATACCAGTGCCCCATCTGTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS GCA 90 bp | GCACAAACGCGTGCTTCTTCAGATGGCACAGCTGTAGGAATGCCTTaGTACACTCCCCACACCGGTAGCGTCGGCCCAGCTTTGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQTRASSDGTAVGMP*YTPHTGSVGPALRS Trigger: GCTCCTCAAAGCTGGGCCGACGCTACCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGCTGTGCCATCTGAAGAAGCACGCGTTTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | GAGATGGTGACCTCCACAATACCCTCACCTGGGGGCACTTCCTGTTaGCTACAAGTGTCCAGCAGTTCCGGCTCACTCTGGAGGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: EMVTSTIPSPGGTSC*LQVSSSSGSLWRST Trigger: GGTGCTCCTCCAGAGTGAGCCGGAACTGCTGGACACTTGTAGCCAACAGGAAGTGCCCCCAGGTGAGGGTATTGTGGAGGTCACCATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCTGGAGGGACATCTAACTGCTaGGCCGGGCAGGTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MCGLTPRSQSAGFLHLSGGTSNC*AGQVST Trigger: GGTGGAGACCTGCCCGGCCAAGCAGTTAGATGTCCC...TCCAGAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | TGTGATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCAGCGTCGGCCCAGCTTaGAGGAGCTTCCTGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CDVWIDPKKPVSWVPAPLSVGPA*RSFLLG Trigger: ACCCAGCAGGAAGCTCCTCAAAGCTGGGCCGACGCT...GAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACATCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 90 bp | GGCAAAGGTTTTGCCGCATTGCTCACACACAAAGGGCCGGGCACCTaGGTGGACCACCTGATGTTCCCTGAGGTCTCTGCGGGTACCATA | + |
|
Preference number: 5 (lower is better) Translates to: GKGFAALLTHKGPGT*VDHLMFPEVSAGTI Trigger: TATGGTACCCGCAGAGACCTCAGGGAACATCAGGTGGTCCACTCAGGTGCCCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | GCTGTGAGGGAGAACATAGCCCATGCCACAGATGGGGCACTGGTATaGCTTGTCTGTCATGTGGGACTTGAGGTGGCGGCGCAACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVRENIAHATDGALV*LVCHVGLEVAAQLG Trigger: ACCAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGACAAGCCATACCAGTGCCCCATCTGTGGCATGGGCTATGTTCTCCCTCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGAGCTGTAGGAATGCCTaGCTACACTCCCCACACCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMSCRNA*LHSPHR Trigger: CCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGCT...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTCTGTCATGTGGGACTaGAGGTGGCGGCGCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSSPGPAFIFFTPPSTQPSVMWD*RWRRNL Trigger: CAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGA...GGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ACACCCGCTCTGCTGCACCAGTCTTCACGGGGAGCTCTTGCAGGGGTAAAGGAAAAAGGTTTTGCCGCATaGCTCACACACAAAGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPALLHQSSRGALAGVKEKGFAA*LTHKGP Trigger: CGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTT...TTCCTTTACCCCTGCAAGAGCTCCCCGTGAAGACTGGTGCAGCAGAGCGGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCACCCAGCCCTTCCTCTGTCATGTGGGACTaGAGGTGGCGGCGCAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALQAQLLSSLLHLAPSPSSVMWD*RWRRNL Trigger: CAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGA...GGAAGGGCTGGGTGCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 90 bp | CTTTTCCTGGCTTTCAGAGATGGTGACCTCCACAATACCCTCACCTaGGGGCACTTCCTGTTGGCTACAAGTGTCCAGCAGTTCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLAFRDGDLHNTLT*GHFLLATSVQQFRL Trigger: GAGCCGGAACTGCTGGACACTTGTAGCCAACAGGAAGTGCCCCCAGGTGAGGGTATTGTGGAGGTCACCATCTCTGAAAGCCAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS GCA 90 bp | CACTCGGTGCACAGGAAAGGCTTGTGGTCTGTGTGCACAAACGCGTaGTTCTTCAGATGGCACAGCTGTAGGAATGCCTTGCTACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSVHRKGLWSVCTNA*FFRWHSCRNALLHS Trigger: GGAGTGTAGCAAGGCATTCCTACAGCTGTGCCATCTGAAGAAGCACGCGTTTGTGCACACAGACCACAAGCCTTTCCTGTGCACCGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCTGGACAGACCAAGGACGCATaGCCATCACTCTGCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MCGLTPRSQSAGFLHLSGQTKDA*PSLCSL Trigger: AAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTG...TCCAGAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCAGCTGTAGGAATGCCTaGCTACACTCCCCACACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCHYEPVWLIPNISHCLGSCRNA*LHSPHR Trigger: CCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGCT...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTGGATTGACCCCAAGAAGCCAGTCAGCTGGGTTCCTGCACCTCTCTGGAGTGCACAGGAAAGGCTaGTGGTCTGTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MCGLTPRSQSAGFLHLSGVHRKG*WSVCTN Trigger: GTTTGTGCACACAGACCACAAGCCTTTCCTGTGCAC...TCCAGAGAGGTGCAGGAACCCAGCTGACTGGCTTCTTGGGGTCAATCCACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | AACCTCCGAGGCAGCTCTCCAGGCCCAGCTTTTATCTTCTTTACTCCACCTAGCAAAGGTTTTGCCGCATaGCTCACACACAAAGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLRGSSPGPAFIFFTPPSKGFAA*LTHKGP Trigger: CGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTT...GCTAGGTGGAGTAAAGAAGATAAAAGCTGGGCCTGGAGAGCTGCCTCGGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTACTCTGGTACTCATAGCACTCTCACTTCACTAAGGCATCTCCCGACCGGGCACTGGTATGGCTaGTCTGTCATGTGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAYSGTHSTLTSLRHLPTGHWYG*SVMWDL Trigger: CAAGTCCCACATGACAGACAAGCCATACCAGTGCCC...GGTCGGGAGATGCCTTAGTGAAGTGAGAGTGCTATGAGTACCAGAGTAGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | TACAGCTCAGTGAATCACAGGCTTTGTAAAGGCCAACCTCTTCTCCCTCCCTCCCAGACCAAGGACGCATaGCCATCACTCTGCAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSSVNHRLCKGQPLLPPSQTKDA*PSLCSL Trigger: AAGACTGCAGAGTGATGGCAATGCGTCCTTGGTCTG...GGAGGGAGGGAGAAGAGGTTGGCCTTTACAAAGCCTGTGATTCACTGAGCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCCCTTGGCACCACCCAGATCACATCACCCTATCGTAACAACTCCCATGATGGGTTGGCTATCCTaGAAAAGTTGCTCTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRPLAPPRSHHPIVTTPMMGWLS*KSCSSV Trigger: AACCGAAGAGCAACTTTTCAAGGATAGCCAACCCAT...CATGGGAGTTGTTACGATAGGGTGATGTGATCTGGGTGGTGCCAAGGGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGGGGACATCTAACTGCTaGGCCGGGCAGGTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NYMSIPASHRLKIHPPTKGTSNC*AGQVST Trigger: GGTGGAGACCTGCCCGGCCAAGCAGTTAGATGTCCC...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTCACTATGAGCCTGTCTGGCTCATCCCCAACATCTCACATTGTCTAGGCGTGCACAGGAAAGGCTaGTGGTCTGTGTGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCHYEPVWLIPNISHCLGVHRKG*WSVCTN Trigger: GTTTGTGCACACAGACCACAAGCCTTTCCTGTGCAC...GCCTAGACAATGTGAGATGTTGGGGATGAGCCAGACAGGCTCATAGTGACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | CCTCATAGCTTCCCTGTGCCCAAGCCTACAGAGTGCACAAATCCCACCCCACCCTCAGAGACTAGCATATaGTCTTCTTGGATACTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PHSFPVPKPTECTNPTPPSETSI*SSWILW Trigger: CCATAGTATCCAAGAAGACAATATGCTAGTCTCTGA...GGGTGGGGTGGGATTTGTGCACTCTGTAGGCTTGGGCACAGGGAAGCTATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | AATTACATGTCCATTCCTGCTTCTCACCGCTTGAAAATCCATCCACCTACCAAGGGGCACTGGTATGGCTaGTCTGTCATGTGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NYMSIPASHRLKIHPPTKGHWYG*SVMWDL Trigger: CAAGTCCCACATGACAGACAAGCCATACCAGTGCCC...CTTGGTAGGTGGATGGATTTTCAAGCGGTGAGAAGCAGGAATGGACATGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTACTCTGGTACTCATAGCACTCTCACTTCACTAAGGCATCTCCCGACCTCAGAGACTAGCATATaGTCTTCTTGGATACTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TAYSGTHSTLTSLRHLPTSETSI*SSWILW Trigger: CCATAGTATCCAAGAAGACAATATGCTAGTCTCTGA...GGTCGGGAGATGCCTTAGTGAAGTGAGAGTGCTATGAGTACCAGAGTAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 72 bp | ACCACCTCGGCCCAGCCACGAAAGCCCACGTCCTTGTaGATCAGGACCAGGCTGGGGCTAGGGGCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TTSAQPRKPTSL*IRTRLGLGAGC Trigger: GCAGCCAGCCCCTAGCCCCAGCCTGGTCCTGATCCACAAGGACGTGGGCTTTCGTGGCTGGGCCGAGGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CAA 72 bp | TCTACCACCTCGGCCCAGCCACGAAAGCCCACGTCCTaGTGGATCAGGACCAGGCTGGGGCTAGGGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: STTSAQPRKPTS*WIRTRLGLGAG Trigger: GCCAGCCCCTAGCCCCAGCCTGGTCCTGATCCACAAGGACGTGGGCTTTCGTGGCTGGGCCGAGGTGGTAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 72 bp | GGGCATGGGCATGGTGAAGGGGCATCTGGCATCTGGTaGGTCTTTCGGTGTAGCCGCAGGGAAGGTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GHGHGEGASGIW*VFRCSRREGRR Trigger: CCGCCGACCTTCCCTGCGGCTACACCGAAAGACCCACCAGATGCCAGATGCCCCTTCACCATGCCCATGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS CCA 72 bp | TGTGGAGCCTCATGTGATTCCGCAGGGAACCCCGGGTaGCCAGGAGCCGTCCACACACTGGGCATGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CGASCDSAGNPG*PGAVHTLGMGM Trigger: CATGCCCATGCCCAGTGTGTGGACGGCTCCTGGCCACCCGGGGTTCCCTGCGGAATCACATGAGGCTCCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 72 bp | GGCCAGGAGCCGTCCACACACTGGGCATGGGCATGGTaGAGGGGCATCTGGCATCTGGTGGGTCTTTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQEPSTHWAWAW*RGIWHLVGLSV Trigger: CACCGAAAGACCCACCAGATGCCAGATGCCCCTTCACCATGCCCATGCCCAGTGTGTGGACGGCTCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS TCA 72 bp | ACACGGGGCACAGGTAGGCCTCTCCAGTGTGGGAGATaGGATGGCGCCGCAGTTCAGGCAGCTGGGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRGTGRPLQCGR*DGAAVQAAGGK Trigger: CTTACCCCCAGCTGCCTGAACTGCGGCGCCATCTCATCTCCCACACTGGAGAGGCCTACCTGTGCCCCGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
||
| CDS GCA 72 bp | GGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAGGTTTTaGCGCATTGCTCACACACAAAGGGCCGGGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVAAGKVGGQRF*RIAHTQRAGHL Trigger: CAGGTGCCCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTTGCCCGCCGACCTTCCCTGCGGCTACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 72 bp | CGGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAGGTTTaGCCGCATTGCTCACACACAAAGGGCCGGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: RCSRREGRRAKV*PHCSHTKGRAP Trigger: AGGTGCCCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTTGCCCGCCGACCTTCCCTGCGGCTACACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 90 bp | TGGGTCTTTCGGTGTAGCCGCAGGGAAGGTCGGCGGGCAAAGGTTTaGCCGCATTGCTCACACACAAAGGGCCGGGCACCTGAGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: WVFRCSRREGRRAKV*PHCSHTKGRAPEWT Trigger: GGTCCACTCAGGTGCCCGGCCCTTTGTGTGTGAGCAATGCGGCAAAACCTTTGCCCGCCGACCTTCCCTGCGGCTACACCGAAAGACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | ATGGCTCCGCACGGGGCTAACGAGAAGTCCTCCTCGTaGGGTGTCTTCATTCCCTCGCCCTTCTCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: MAPHGANEKSSS*GVFIPSPFSRT Trigger: CGTCCTGGAGAAGGGCGAGGGAATGAAGACACCGCACGAGGAGGACTTCTCGTTAGCCCCGTGCGGAGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099714.10 |
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| CDS TCA 72 bp | GTTCCAGGCTCTGAGGTCTGGGCTATAGACGGGCACTaGCTGCTGGGGACATCTAACTGCTTGGCCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VPGSEVWAIDGH*LLGTSNCLAGQ Trigger: CTGCCCGGCCAAGCAGTTAGATGTCCCCAGCAGTCAGTGCCCGTCTATAGCCCAGACCTCAGAGCCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | AGGGCCGGGCACCTGAGTGGACCACCTGATGTTCCCTaGGGTCTCTGCGGGTACCATAGGCCTTGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: RAGHLSGPPDVP*GLCGYHRPCHT Trigger: AGTGTGACAAGGCCTATGGTACCCGCAGAGACCTCAGGGAACATCAGGTGGTCCACTCAGGTGCCCGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | CCTGGGCACCCTCAGGAGGAAATAAACCGGCTTCACTaGTCTCTGGGCTCTTCTGGGCAGCTGAGGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PGHPQEEINRLH*SLGSSGQLRCS Trigger: AGAGCACCTCAGCTGCCCAGAAGAGCCCAGAGAGCAGTGAAGCCGGTTTATTTCCTCCTGAGGGTGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | CGTGCTTCTTCAGATGGCACAGCTGTAGGAATGCCTTaGTACACTCCCCACACCGGTAGCGTCGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RASSDGTAVGMP*YTPHTGSVGPA Trigger: AGCTGGGCCGACGCTACCGGTGTGGGGAGTGTAGCAAGGCATTCCTACAGCTGTGCCATCTGAAGAAGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | GGGACATCTAACTGCTTGGCCGGGCAGGTCTCCACCTaGGCACCCTCAGGAGGAAATAAACCGGCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: GTSNCLAGQVST*APSGGNKPASL Trigger: CAGTGAAGCCGGTTTATTTCCTCCTGAGGGTGCCCAGGTGGAGACCTGCCCGGCCAAGCAGTTAGATGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | CCACAGATGGGGCACTGGTATGGCTTGTCTGTCATGTaGGACTTGAGGTGGCGGCGCAACTTGGTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PQMGHWYGLSVM*DLRWRRNLVAS Trigger: ACTGGCCACCAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGACAAGCCATACCAGTGCCCCATCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | TGTTGGCTACAAGTGTCCAGCAGTTCCGGCTCACTCTaGAGGAGCACCATAGGGGGCTCAGAGGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CWLQVSSSSGSL*RSTIGGSEAAG Trigger: TCCTGCTGCCTCTGAGCCCCCTATGGTGCTCCTCCAGAGTGAGCCGGAACTGCTGGACACTTGTAGCCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 90 bp | TGTGTAGCAGACGCCTCTCCTGTCTCAGCTACTTCTTCCTCCAGCTaGGGGTGCAGGACACTTAGACTCTTCTGCGGAGACTGTGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: CVADASPVSATSSSS*GCRTLRLFCGDCGR Trigger: GCGCCCACAGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGTAGCTGAGACAGGAGAGGCGTCTGCTACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | CTGCTCTCTGGGCTCTTCTGGGCAGCTGAGGTGCTCTaGGGCTCAGGTGGAGTCTGTGGTAGGCACTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLSGLFWAAEVL*GSGGVCGRHCL Trigger: TAAACAGTGCCTACCACAGACTCCACCTGAGCCTCAGAGCACCTCAGCTGCCCAGAAGAGCCCAGAGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | AGGGCCGTACACCACGGTGGCCCAGCATGTGGCCTTTaGAGCTTTCCTCAGAGCTGTAGCTCTTGCCACACT | + |
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Preference number: 6 (lower is better) Translates to: RAVHHGGPACGL*SFPQSCSSCHT Trigger: AGTGTGGCAAGAGCTACAGCTCTGAGGAAAGCTTCAAAGGCCACATGCTGGGCCACCGTGGTGTACGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | TGGGGCACTGGTATGGCTTGTCTGTCATGTGGGACTTaGGGTGGCGGCGCAACTTGGTGGCCAGTGTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: WGTGMACLSCGT*GGGATWWPVCK Trigger: CTTACACACTGGCCACCAAGTTGCGCCGCCACCTCAAGTCCCACATGACAGACAAGCCATACCAGTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | GAGAACATAGCCCATGCCACAGATGGGGCACTGGTATaGCTTGTCTGTCATGTGGGACTTGAGGTGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ENIAHATDGALV*LVCHVGLEVAA Trigger: CGCCGCCACCTCAAGTCCCACATGACAGACAAGCCATACCAGTGCCCCATCTGTGGCATGGGCTATGTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 72 bp | GACCTCCACAATACCCTCACCTGGGGGCACTTCCTGTaGGCTACAAGTGTCCAGCAGTTCCGGCTCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: DLHNTLTWGHFL*ATSVQQFRLTL Trigger: CAGAGTGAGCCGGAACTGCTGGACACTTGTAGCCAACAGGAAGTGCCCCCAGGTGAGGGTATTGTGGAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 72 bp | GACGCCTCTCCTGTCTCAGCTACTTCTTCCTCCAGCTaGGGGTGCAGGACACTTAGACTCTTCTGCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: DASPVSATSSSS*GCRTLRLFCGD Trigger: GTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGTAGCTGAGACAGGAGAGGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | TCTCCTGTCTCAGCTACTTCTTCCTCCAGCTTGGGGTaGAGGACACTTAGACTCTTCTGCGGAGACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SPVSATSSSSLG*RTLRLFCGDCG Trigger: CCCACAGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGTAGCTGAGACAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | CCACACTCGGTGCACAGGAAAGGCTTGTGGTCTGTGTaGACAAACGCGTGCTTCTTCAGATGGCACAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PHSVHRKGLWSV*TNACFFRWHSC Trigger: ACAGCTGTGCCATCTGAAGAAGCACGCGTTTGTGCACACAGACCACAAGCCTTTCCTGTGCACCGAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | ACGCCTCTCCTGTCTCAGCTACTTCTTCCTCCAGCTTaGGGTGCAGGACACTTAGACTCTTCTGCGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: TPLLSQLLLPPA*GAGHLDSSAET Trigger: AGTCTCCGCAGAAGAGTCTAAGTGTCCTGCACCCCAAGCTGGAGGAAGAAGTAGCTGAGACAGGAGAGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | GCTTTCAGAGATGGTGACCTCCACAATACCCTCACCTaGGGGCACTTCCTGTTGGCTACAAGTGTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AFRDGDLHNTLT*GHFLLATSVQQ Trigger: CTGCTGGACACTTGTAGCCAACAGGAAGTGCCCCCAGGTGAGGGTATTGTGGAGGTCACCATCTCTGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS GCA 72 bp | GCTCAGGTGGAGTCTGTGGTAGGCACTGTTTATCCATaGTGTCATCGTGAAGCAACAGGCCAATGGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: AQVESVVGTVYP*CHREATGQWVG Trigger: GCCAACCCATTGGCCTGTTGCTTCACGATGACAGCATGGATAAACAGTGCCTACCACAGACTCCACCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CCA 72 bp | TTGTGGTCTGTGTGCACAAACGCGTGCTTCTTCAGATaGCACAGCTGTAGGAATGCCTTGCTACACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LWSVCTNACFFR*HSCRNALLHSP Trigger: TGGGGAGTGTAGCAAGGCATTCCTACAGCTGTGCCATCTGAAGAAGCACGCGTTTGTGCACACAGACCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | GTCTGTGGTAGGCACTGTTTATCCATGCTGTCATCGTaGAGCAACAGGCCAATGGGTTGGCTATCCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VCGRHCLSMLSS*SNRPMGWLSLK Trigger: TTTCAAGGATAGCCAACCCATTGGCCTGTTGCTTCACGATGACAGCATGGATAAACAGTGCCTACCACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS TCA 72 bp | CATCGTGAAGCAACAGGCCAATGGGTTGGCTATCCTTaGAAAGTTGCTCTTCGGTTTTGGTCACAGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: HREATGQWVGYP*KVALRFWSQIQ Trigger: CTGAATCTGTGACCAAAACCGAAGAGCAACTTTTCAAGGATAGCCAACCCATTGGCCTGTTGCTTCACGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 72 bp | ATCCATGCTGTCATCGTGAAGCAACAGGCCAATGGGTaGGCTATCCTTGAAAAGTTGCTCTTCGGTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: IHAVIVKQQANG*AILEKLLFGFG Trigger: ACCAAAACCGAAGAGCAACTTTTCAAGGATAGCCAACCCATTGGCCTGTTGCTTCACGATGACAGCATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 90 bp | AACAGGCCAATGGGTTGGCTATCCTTGAAAAGTTGCTCTTCGGTTTaGGTCACAGATTCAGAGACTAGCATATTGTCTTCTTGGATACTA | + |
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Preference number: 6 (lower is better) Translates to: NRPMGWLSLKSCSSV*VTDSETSILSSWIL Trigger: TAGTATCCAAGAAGACAATATGCTAGTCTCTGAATCTGTGACCAAAACCGAAGAGCAACTTTTCAAGGATAGCCAACCCATTGGCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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| CDS CAA 72 bp | ATGGGTTGGCTATCCTTGAAAAGTTGCTCTTCGGTTTaGGTCACAGATTCAGAGACTAGCATATTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MGWLSLKSCSSV*VTDSETSILSS Trigger: AGAAGACAATATGCTAGTCTCTGAATCTGTGACCAAAACCGAAGAGCAACTTTTCAAGGATAGCCAACCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099714.10 ENSMUST00000111333.2 |
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