Pregenerated sensors for ZFP398 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062519Ensembl transcript IDs: ENSMUST00000079881.11, ENSMUST00000114598.3
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATCTTTGAGACAGGGTCTCTCACTGACCCATGGCTTACCAATTaGGCTGGGCTGATAGGCCAGCAAGAGCCTTCCCAGTGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LIFETGSLTDPWLTN*AGLIGQQEPSQCWD Trigger: ATCCCAGCACTGGGAAGGCTCTTGCTGGCCTATCAGCCCAGCCCAATTGGTAAGCCATGGGTCAGTGAGAGACCCTGTCTCAAAGATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | GCAAGTCCTCAGGCCCTGGTGCAGAGGCCAGAGGAATTTTACTGCTaGCTGCAGCTGACTGAAGTAAGATGTGCATGGGAAGAGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: ASPQALVQRPEEFYC*LQLTEVRCAWEEEL Trigger: CAGCTCCTCTTCCCATGCACATCTTACTTCAGTCAGCTGCAGTCAGCAGTAAAATTCCTCTGGCCTCTGCACCAGGGCCTGAGGACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | GAGCTACTGACTCTGATCTTTGAGACAGGGTCTCTCACTGACCCATaGCTTACCAATTGGGCTGGGCTGATAGGCCAGCAAGAGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ELLTLIFETGSLTDP*LTNWAGLIGQQEPS Trigger: GGAAGGCTCTTGCTGGCCTATCAGCCCAGCCCAATTGGTAAGCCATGGGTCAGTGAGAGACCCTGTCTCAAAGATCAGAGTCAGTAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | GCATTAACCTCCTCCTCCCTCCGTAACCCCGCCCCACAATCAATCTaGCCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTT | + |
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Preference number: 1 (lower is better) Translates to: ALTSSSLRNPAPQSI*PVCVFTFMWRPEDF Trigger: AAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTCAGATTGATTGTGGGGCGGGGTTACGGAGGGAGGAGGAGGTTAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | TGCCATCCTCCTGTCCCAGCTTCTCAAGTACCAAAGTCACAGGTGTaGGCCATCACACTTGGCCAAACCTTGGTTCTCAACACTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: CHPPVPASQVPKSQV*AITLGQTLVLNTCH Trigger: GTGGCAAGTGTTGAGAACCAAGGTTTGGCCAAGTGTGATGGCTCACACCTGTGACTTTGGTACTTGAGAAGCTGGGACAGGAGGATGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | CCTGGTGCAGAGGCCAGAGGAATTTTACTGCTGACTGCAGCTGACTaGAGTAAGATGTGCATGGGAAGAGGAGCTGGGCTAGAATTCCCA | + |
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Preference number: 1 (lower is better) Translates to: PGAEARGILLLTAAD*SKMCMGRGAGLEFP Trigger: TGGGAATTCTAGCCCAGCTCCTCTTCCCATGCACATCTTACTTCAGTCAGCTGCAGTCAGCAGTAAAATTCCTCTGGCCTCTGCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | TGGAGGCTGGAGGAGAGGATCGGATCCCTTAAATACCCATGTGGATaGTGGGAACTGAACACAGGTTCTGACAAGAGCAGCAAGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: WRLEERIGSLKYPCG*WELNTGSDKSSKWS Trigger: AGACCACTTGCTGCTCTTGTCAGAACCTGTGTTCAGTTCCCAGCATCCACATGGGTATTTAAGGGATCCGATCCTCTCCTCCAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | GTATGTGTCTGGGTGATTTGCCTACATGTATATATGTGTACCACATaGATGCCTAGGGGCTGTGGAGGCTGGAGGAGAGGATCGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: VCVWVICLHVYMCTT*MPRGCGGWRRGSDP Trigger: GGGATCCGATCCTCTCCTCCAGCCTCCACAGCCCCTAGGCATGCATGTGGTACACATATATACATGTAGGCAAATCACCCAGACACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | CATGTATATATGTGTACCACATGCATGCCTAGGGGCTGTGGAGGCTaGAGGAGAGGATCGGATCCCTTAAATACCCATGTGGATGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: HVYMCTTCMPRGCGG*RRGSDPLNTHVDAG Trigger: CCCAGCATCCACATGGGTATTTAAGGGATCCGATCCTCTCCTCCAGCCTCCACAGCCCCTAGGCATGCATGTGGTACACATATATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | TTGCTACTCAGGCAACTGCAGAGGCTGCTTTCTTGTCCAAGAAGCTaGAGCATAAGAGGAGGGAAGGAATGCCCTGTCTCTCTCAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: LLLRQLQRLLSCPRS*SIRGGKECPVSLKN Trigger: ATTCTTGAGAGAGACAGGGCATTCCTTCCCTCCTCTTATGCTTCAGCTTCTTGGACAAGAAAGCAGCCTCTGCAGTTGCCTGAGTAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | CTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTaGTACTCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: LPIHLSLPRGSLLSL*YSDRMIRSHILLCN Trigger: GTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGAGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | TTGGCCAAACCTTGGTTCTCAACACTTGCCACTTCCAGTTCAGCCTaGCTGTGCGATTACCTTTCACACTGGTTCTTTAAACTGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LAKPWFSTLATSSSA*LCDYLSHWFFKLCC Trigger: GCAGCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGCTGAACTGGAAGTGGCAAGTGTTGAGAACCAAGGTTTGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | AGATACACTCCTGGCTGCACACTTAGGGATGGAACTAGGTTCAGATaGTCTCAGATGACTAAGCAAGCCCAAGAAAAGAACATAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: RYTPGCTLRDGTRFR*SQMTKQAQEKNIRQ Trigger: CTGCCTTATGTTCTTTTCTTGGGCTTGCTTAGTCATCTGAGAGCATCTGAACCTAGTTCCATCCCTAAGTGTGCAGCCAGGAGTGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | AAACCTTGGTTCTCAACACTTGCCACTTCCAGTTCAGCCTGGCTGTaGGATTACCTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: KPWFSTLATSSSAWL*DYLSHWFFKLCCRF Trigger: AAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGCTGAACTGGAAGTGGCAAGTGTTGAGAACCAAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR TCA 90 bp | TTGCTCTTACAGAGGACCCAGGTTCAATTTCCAGCACCCACGTGGTaGCTCACAGCCATTCATAATTCCAATTCTACAGGATCTAAAACC | + |
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Preference number: 1 (lower is better) Translates to: LLLQRTQVQFPAPTW*LTAIHNSNSTGSKT Trigger: GGTTTTAGATCCTGTAGAATTGGAATTATGAATGGCTGTGAGTCACCACGTGGGTGCTGGAAATTGAACCTGGGTCCTCTGTAAGAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | AAAAACAAGGTTTTCCTATGTAGGCTCTACTGGCCTTTAATTCTCTaGCATCCTCCTGTCCCAGCTTCTCAAGTACCAAAGTCACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: KNKVFLCRLYWPLIL*HPPVPASQVPKSQV Trigger: CACCTGTGACTTTGGTACTTGAGAAGCTGGGACAGGAGGATGGCAGAGAATTAAAGGCCAGTAGAGCCTACATAGGAAAACCTTGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | GTGCTGGCATTAAAGGTGTGCAGCACCATCACCCAGCTGCTTTTATaGCTCTCGTTCAGTTGTTATTTGAACTATAATTCACTTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: VLALKVCSTITQLLL*LSFSCYLNYNSLLA Trigger: GGCCAAAAGTGAATTATAGTTCAAATAACAACTGAACGAGAGCCATAAAAGCAGCTGGGTGATGGTGCTGCACACCTTTAATGCCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | TATGGGTCTACTACCATCATCTGGTATCATCCATGGGACTTTCATTaGTTACAGGCTGAAAGTTATGACAGCAGACTAGGTCTTACACTG | + |
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Preference number: 1 (lower is better) Translates to: YGSTTIIWYHPWDFH*LQAESYDSRLGLTL Trigger: CAGTGTAAGACCTAGTCTGCTGTCATAACTTTCAGCCTGTAAGCAATGAAAGTCCCATGGATGATACCAGATGATGGTAGTAGACCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | GTATATGAACATAACAACATCAGATCCTCATCAGAAATGTCTCCTTaGTACTCAGGCAACTGCAGAGGCTGCTTTCTTGTCCAAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: VYEHNNIRSSSEMSP*YSGNCRGCFLVQEA Trigger: AGCTTCTTGGACAAGAAAGCAGCCTCTGCAGTTGCCTGAGTAGCAAGGAGACATTTCTGATGAGGATCTGATGTTGTTATGTTCATATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 90 bp | GCCTGGCTGTGCGATTACCTTTCACACTGGTTCTTTAAACTGTGCTaGAGGTTTTTAAGCTCTAATACCTCTGAGATGCCTTATACACAA | + |
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Preference number: 1 (lower is better) Translates to: AWLCDYLSHWFFKLC*RFLSSNTSEMPYTQ Trigger: TTGTGTATAAGGCATCTCAGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | GGATCTAAAACCCTCTCAGACCTCTGCAGGCACCAGGCATGTATATaGTGCACATACATACATGTAAGCAAGATACTGACACATAAAATC | + |
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Preference number: 1 (lower is better) Translates to: GSKTLSDLCRHQACI*CTYIHVSKILTHKI Trigger: GATTTTATGTGTCAGTATCTTGCTTACATGTATGTATGTGCACCATATACATGCCTGGTGCCTGCAGAGGTCTGAGAGGGTTTTAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | TGTTTTAAACTAGGTATTGTGGTACACAGCTTTAATTCCAGCACTTaGAAGGCAGTAGCATTCAGATTTCTGTGTGTTCAAGGCCAACCT | + |
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Preference number: 1 (lower is better) Translates to: CFKLGIVVHSFNSST*KAVAFRFLCVQGQP Trigger: AGGTTGGCCTTGAACACACAGAAATCTGAATGCTACTGCCTTCCAAGTGCTGGAATTAAAGCTGTGTACCACAATACCTAGTTTAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | ATTCCTTTATGTAACAGATATAATTACTGTAGGTTTCGGAACTTGTaGGCTCTCTCCTGGACTTTCTGCTCTGCTGTGAACATAAATAAC | + |
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Preference number: 1 (lower is better) Translates to: IPLCNRYNYCRFRNL*ALSWTFCSAVNINN Trigger: GTTATTTATGTTCACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCTACAGTAATTATATCTGTTACATAAAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | ATTTGGCAATTGATCCCAATATACTATGGGTCTACTACCATCATCTaGTATCATCCATGGGACTTTCATTGCTTACAGGCTGAAAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: IWQLIPIYYGSTTII*YHPWDFHCLQAESY Trigger: ATAACTTTCAGCCTGTAAGCAATGAAAGTCCCATGGATGATACCAGATGATGGTAGTAGACCCATAGTATATTGGGATCAATTGCCAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CCA 90 bp | GAGGGAAGGAATGCCCTGTCTCTCTCAAGAATTATGACACAAACTTaGGTCTTCCATCCCATTGAAATAAAGAAACTTAGGTACTTATTT | + |
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Preference number: 1 (lower is better) Translates to: EGRNALSLSRIMTQT*VFHPIEIKKLRYLF Trigger: AAATAAGTACCTAAGTTTCTTTATTTCAATGGGATGGAAGACCCAAGTTTGTGTCATAATTCTTGAGAGAGACAGGGCATTCCTTCCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTTGTGGGCTCTCTCCTaGACTTTCTGCTCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYLWALS*TFCSAV Trigger: CACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAA...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTATTGTGGGCTCTCTCCTaGACTTTCTGCTCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLLWALS*TFCSAV Trigger: CACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAA...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR CAA 90 bp | CAGAAATGTCTCCTTGCTACTCAGGCAACTGCAGAGGCTGCTTTCTaGTCCAAGAAGCTGAAGCATAAGAGGAGGGAAGGAATGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QKCLLATQATAEAAF*SKKLKHKRREGMPC Trigger: ACAGGGCATTCCTTCCCTCCTCTTATGCTTCAGCTTCTTGGACAAGAAAGCAGCCTCTGCAGTTGCCTGAGTAGCAAGGAGACATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACACAAGTCAGAGGTGCTaGATTCTCTTCCAGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYTSQRC*ILFQFS Trigger: TGAAAACTGGAAGAGAATCCAGCACCTCTGACTTGT...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCATTCTTATACTGCTGTaGATTTCCAAAGCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FGALPIHLSLPRGSLLSLILILL*ISKAQA Trigger: TGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAAT...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCGGGAGGACAGGATTTTaGCAGAGAACTATATCACAA | + |
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Preference number: 2 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGGRTGF*QRTISQ Trigger: TTGTGATATAGTTCTCTGCCAAAATCCTGTCCTCCC...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTACAGTATTCTTATACTaGTGTGGATTTCCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFPYTCLCLEAVCSHSATTVFLY*CGFPKH Trigger: GTGCTTTGGAAATCCACAGCAGTATAAGAATACTGT...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTTCAGAAGCCATATCTTaGTTTGTAACTCTGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LFPYTCLCLEAVCSHSATSEAIS*FVTLLL Trigger: CAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGA...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTAACAAGTCAGAGGTGCTaGATTCTCTTCCAGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLTSQRC*ILFQFS Trigger: TGAAAACTGGAAGAGAATCCAGCACCTCTGACTTGT...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTATAAGCCACAGAGCCTaGCTAAGTATCGTCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTISHRA*LSIVSR Trigger: TCTTGAGACGATACTTAGCCAGGCTCTGTGGCTTAT...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CAA 90 bp | CTGCTCTCACTCTGCTACTCTGACAGGATGATCAGAAGCCATATCTaGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LLSLCYSDRMIRSHI*LCNSAFVVSDKSEV Trigger: CACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGAGTAGCAGAGTGAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTCCATACACCTGTCTCTaGCTAGAGGCAGTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSPYTCL*LEAVCS Trigger: AGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGG...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTATCTGGTATCATCCATaGGACTTTCATTGCTTACAG | + |
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Preference number: 2 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTIWYHP*DFHCLQ Trigger: CTGTAAGCAATGAAAGTCCCATGGATGATACCAGAT...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTCTTGACAAAGTGCTGTaGTCTTTGCTGCTGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSLDKVL*SLLLRT Trigger: GGTCCTCAGCAGCAAAGATCACAGCACTTTGTCAAG...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTACAGGTGGCTGGGCATaGCAGCATGCTTTTAATCGT | + |
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Preference number: 2 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSTGGWA*QHAFNR Trigger: ACGATTAAAAGCATGCTGTCATGCCCAGCCACCTGT...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CAA 90 bp | TTGACAACAAATGGGGTCTACTTGTTAGGAGATTGGCTTAAGTCCTaGCTCTTAGCCAGACTAGAGATTAGGATCCCACATGTTTATGCT | + |
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Preference number: 2 (lower is better) Translates to: LTTNGVYLLGDWLKS*LLARLEIRIPHVYA Trigger: AGCATAAACATGTGGGATCCTAATCTCTAGTCTGGCTAAGAGCAAGGACTTAAGCCAATCTCCTAACAAGTAGACCCCATTTGTTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTAGAGGAGGGAAGGAATaGCCTGTCTCTCTCAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSRGGKE*PVSLKN Trigger: ATTCTTGAGAGAGACAGGGCATTCCTTCCCTCCTCT...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CAA 90 bp | CAGCAGACTAGGTCTTACACTGACTTCTTGTGTCTCCCAGGATCCTaGTTGTTATTAATGTCACACAACAGTTTTATGTGTGTGATTATC | + |
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Preference number: 2 (lower is better) Translates to: QQTRSYTDFLCLPGS*LLLMSHNSFMCVII Trigger: GATAATCACACACATAAAACTGTTGTGTGACATTAATAACAACAAGGATCCTGGGAGACACAAGAAGTCAGTGTAAGACCTAGTCTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR CAA 90 bp | CAAATTCCTTTATGTAACAGATATAATTACTGTAGGTTTCGGAACTaGTGGGCTCTCTCCTGGACTTTCTGCTCTGCTGTGAACATAAAT | + |
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Preference number: 2 (lower is better) Translates to: QIPLCNRYNYCRFRN*WALSWTFCSAVNIN Trigger: ATTTATGTTCACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCTACAGTAATTATATCTGTTACATAAAGGAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTCCATGGGACTTTCATTaGTTACAGGCTGAAAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSPWDFH*LQAESY Trigger: ATAACTTTCAGCCTGTAAGCAATGAAAGTCCCATGG...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
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| 3UTR GCA 72 bp | TGCTTCTGCCTCCTGCGAGTGCTGGCATTAAAGGTGTaGAGCACCATCACCCAGCTGCTTTTATGGCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: CFCLLRVLALKV*STITQLLLWLS Trigger: CGAGAGCCATAAAAGCAGCTGGGTGATGGTGCTGCACACCTTTAATGCCAGCACTCGCAGGAGGCAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | CTTCAAGGTTTGGGGCTCTTCCCATACACCTGTCTCTaGCTAGAGGCAGTCTGCTCTCACTCTGCTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LQGLGLFPYTCL*LEAVCSHSATL Trigger: CAGAGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAACCTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | GTTTTCGTTCCTGAACAGCAAGTCCTCAGGCCCTGGTaGAGAGGCCAGAGGAATTTTACTGCTGACTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFVPEQQVLRPW*RGQRNFTADCS Trigger: GCTGCAGTCAGCAGTAAAATTCCTCTGGCCTCTGCACCAGGGCCTGAGGACTTGCTGTTCAGGAACGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | ATGTGTACCACATGCATGCCTAGGGGCTGTGGAGGCTaGAGGAGAGGATCGGATCCCTTAAATACCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: MCTTCMPRGCGG*RRGSDPLNTHV Trigger: CACATGGGTATTTAAGGGATCCGATCCTCTCCTCCAGCCTCCACAGCCCCTAGGCATGCATGTGGTACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | CAGGCCCTGGTGCAGAGGCCAGAGGAATTTTACTGCTaGCTGCAGCTGACTGAAGTAAGATGTGCATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QALVQRPEEFYC*LQLTEVRCAWE Trigger: TTCCCATGCACATCTTACTTCAGTCAGCTGCAGTCAGCAGTAAAATTCCTCTGGCCTCTGCACCAGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | ACTCTGATCTTTGAGACAGGGTCTCTCACTGACCCATaGCTTACCAATTGGGCTGGGCTGATAGGCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLIFETGSLTDP*LTNWAGLIGQQ Trigger: TTGCTGGCCTATCAGCCCAGCCCAATTGGTAAGCCATGGGTCAGTGAGAGACCCTGTCTCAAAGATCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | GAAAATGGGGTTGGGAATTGTGGTGCATCCAGAACATaGGGCAGAGGCAGGCAGATCCCTGTAAGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ENGVGNCGASRT*GRGRQIPVSSR Trigger: CCTTGAACTTACAGGGATCTGCCTGCCTCTGCCTCATGTTCTGGATGCACCACAATTCCCAACCCCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | TGGGTGATTTGCCTACATGTATATATGTGTACCACATaGATGCCTAGGGGCTGTGGAGGCTGGAGGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WVICLHVYMCTT*MPRGCGGWRRG Trigger: TCCTCTCCTCCAGCCTCCACAGCCCCTAGGCATGCATGTGGTACACATATATACATGTAGGCAAATCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | CTGAGGAAGTCTTTGTGCCACCATATAGGGGGCAGATaGATAGGACTCTTCTGGGGTTTCTTCTCTACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRKSLCHHIGGR*IGLFWGFFSTG Trigger: CCCTGTAGAGAAGAAACCCCAGAAGAGTCCTATTCATCTGCCCCCTATATGGTGGCACAAAGACTTCCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | GTCATCACGTCTCAGGGAAAGGTGACTACACTGATATaGGCAGAACTTAGCTGGTTTCAGACACACGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VITSQGKVTTLI*AELSWFQTHGN Trigger: GTTGCCGTGTGTCTGAAACCAGCTAAGTTCTGCTCATATCAGTGTAGTCACCTTTCCCTGAGACGTGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | CCTGGCTGCACACTTAGGGATGGAACTAGGTTCAGATaGTCTCAGATGACTAAGCAAGCCCAAGAAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGCTLRDGTRFR*SQMTKQAQEKN Trigger: GTTCTTTTCTTGGGCTTGCTTAGTCATCTGAGAGCATCTGAACCTAGTTCCATCCCTAAGTGTGCAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | TCCTCATCAGAAATGTCTCCTTGCTACTCAGGCAACTaGAGAGGCTGCTTTCTTGTCCAAGAAGCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSEMSPCYSGN*RGCFLVQEAEA Trigger: TGCTTCAGCTTCTTGGACAAGAAAGCAGCCTCTGCAGTTGCCTGAGTAGCAAGGAGACATTTCTGATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | AAGGCCAGCCTGGTCTACAAAGCAAAGTTCCAGGCCTaGATACACAGTGAGGCCCAATCTCAAAAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KASLVYKAKFQA*IHSEAQSQKKE Trigger: TTCTTTCTTTTGAGATTGGGCCTCACTGTGTATCCAGGCCTGGAACTTTGCTTTGTAGACCAGGCTGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACATCAGAAGCCATATCTaGCTTTGTAACTCTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYIRSHI*LCNSAF Trigger: AAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGAT...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | GAGGCAGTCTGCTCTCACTCTGCTACTCTGACAGGATaGTCAGAAGCCATATCTTGCTTTGTAACTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EAVCSHSATLTG*SEAISCFVTLL Trigger: AAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGAGTAGCAGAGTGAGAGCAGACTGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | TTCTCAACACTTGCCACTTCCAGTTCAGCCTGGCTGTaGGATTACCTTTCACACTGGTTCTTTAAACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSTLATSSSAWL*DYLSHWFFKLC Trigger: GCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGCTGAACTGGAAGTGGCAAGTGTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | GTTTTCCTATGTAGGCTCTACTGGCCTTTAATTCTCTaGCATCCTCCTGTCCCAGCTTCTCAAGTACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFLCRLYWPLIL*HPPVPASQVPK Trigger: CTTTGGTACTTGAGAAGCTGGGACAGGAGGATGGCAGAGAATTAAAGGCCAGTAGAGCCTACATAGGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | AGACATTATAGCAGACTCCGAGGTAAACAGGGGGTGTaGGAACAAAAGCTTTCTGTCCCAAATGTTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RHYSRLRGKQGV*EQKLSVPNVGF Trigger: GAAGCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAGTCTGCTATAATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | CCTTGGTTCTCAACACTTGCCACTTCCAGTTCAGCCTaGCTGTGCGATTACCTTTCACACTGGTTCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PWFSTLATSSSA*LCDYLSHWFFK Trigger: TTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGCTGAACTGGAAGTGGCAAGTGTTGAGAACCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTTGTCTCCCAGGATCCTaGTTGTTATTAATGTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTCLPGS*LLLMSH Trigger: GTGTGACATTAATAACAACAAGGATCCTGGGAGACA...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTCCTGATTTGGGGGATTaGGCAATTGATCCCAATATA | + |
|
Preference number: 3 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTPDLGD*AIDPNI Trigger: TATATTGGGATCAATTGCCAAATCCCCCAAATCAGG...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TCCAGTTCAGCCTGGCTGTGCGATTACCTTTCACACTaGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSAWLCDYLSH*FFKLCCRFLSS Trigger: AGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCACAGCCAGGCTGAACTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | ACAATAGCAACAGGGGCTGTCTTCTCACTCTTTGACTaGGTTCTTCTTCCAGTCTTAATACAAGAGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TIATGAVFSLFD*VLLPVLIQEVV Trigger: CACCACCTCTTGTATTAAGACTGGAAGAAGAACCCAGTCAAAGAGTGAGAAGACAGCCCCTGTTGCTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | ATTTCTGTGTGTTCAAGGCCAACCTGCTCCACAAAATaGGTTCCAGGACCATTAGAGCTACTTAGTAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISVCSRPTCSTK*VPGPLELLSRP Trigger: AGGTCTACTAAGTAGCTCTAATGGTCCTGGAACTCATTTTGTGGAGCAGGTTGGCCTTGAACACACAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | CCTAACAATAGCAACAGGGGCTGTCTTCTCACTCTTTaGCTGGGTTCTTCTTCCAGTCTTAATACAAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PNNSNRGCLLTL*LGSSSSLNTRG Trigger: ACCTCTTGTATTAAGACTGGAAGAAGAACCCAGTCAAAGAGTGAGAAGACAGCCCCTGTTGCTATTGTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TGTAACAGATATAATTACTGTAGGTTTCGGAACTTGTaGGCTCTCTCCTGGACTTTCTGCTCTGCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CNRYNYCRFRNL*ALSWTFCSAVN Trigger: GTTCACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCTACAGTAATTATATCTGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TTCTGCTTTGGTTTTCCTGTCTCATTTGGATTTGTCTaGTTAGAAGCCAAAGGGAGGACAGGATTTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCFGFPVSFGFV*LEAKGRTGFWQ Trigger: CTGCCAAAATCCTGTCCTCCCTTTGGCTTCTAACCAGACAAATCCAAATGAGACAGGAAAACCAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | TTTAAACAGGTTCTACAGATTAGACTCAGGTGCTCATaGTTGCATGGCAAGCACTTGACTGAGTTATCACTC | + |
|
Preference number: 3 (lower is better) Translates to: FKQVLQIRLRCS*LHGKHLTELSL Trigger: GAGTGATAACTCAGTCAAGTGCTTGCCATGCAAGCATGAGCACCTGAGTCTAATCTGTAGAACCTGTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTaGTATCTGACAAGTCAGAGGTGCTGGATTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SEAISCFVTLLL*YLTSQRCWILF Trigger: GAAGAGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | GATTTGGGGGATTTGGCAATTGATCCCAATATACTATaGGTCTACTACCATCATCTGGTATCATCCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DLGDLAIDPNIL*VYYHHLVSSMG Trigger: TCCCATGGATGATACCAGATGATGGTAGTAGACCCATAGTATATTGGGATCAATTGCCAAATCCCCCAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR GCA 72 bp | TGCGATTACCTTTCACACTGGTTCTTTAAACTGTGCTaGAGGTTTTTAAGCTCTAATACCTCTGAGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CDYLSHWFFKLC*RFLSSNTSEMP Trigger: AGGCATCTCAGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAGGTAATCGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | GTAGAAATCCTTTCCTTAAGAGCATCACACTACCAATaGACAAAAGCCCTGAGTTCAGTGGTACTTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VEILSLRASHYQ*TKALSSVVLSE Trigger: TTCAGAAAGTACCACTGAACTCAGGGCTTTTGTCCATTGGTAGTGTGATGCTCTTAAGGAAAGGATTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TTGATCCCAATATACTATGGGTCTACTACCATCATCTaGTATCATCCATGGGACTTTCATTGCTTACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LIPIYYGSTTII*YHPWDFHCLQA Trigger: AGCCTGTAAGCAATGAAAGTCCCATGGATGATACCAGATGATGGTAGTAGACCCATAGTATATTGGGATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | GTCATTAATGAACCTGGAAACCTGATTTGGGGGATTTaGCAATTGATCCCAATATACTATGGGTCTACTACC | + |
|
Preference number: 3 (lower is better) Translates to: VINEPGNLIWGI*QLIPIYYGSTT Trigger: GGTAGTAGACCCATAGTATATTGGGATCAATTGCCAAATCCCCCAAATCAGGTTTCCAGGTTCATTAATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | ACTTTTTACAAGATAAGCAGCAGCTTCCAGGTTCTTTaGACAAGGACACTAAGCTTTGGCCTTATGATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TFYKISSSFQVL*TRTLSFGLMIV Trigger: CACTATCATAAGGCCAAAGCTTAGTGTCCTTGTTCAAAGAACCTGGAAGCTGCTGCTTATCTTGTAAAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | TCTTTAAGGGTCATTAATGAACCTGGAAACCTGATTTaGGGGATTTGGCAATTGATCCCAATATACTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRVINEPGNLI*GIWQLIPIYYG Trigger: CCCATAGTATATTGGGATCAATTGCCAAATCCCCCAAATCAGGTTTCCAGGTTCATTAATGACCCTTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | AACAGCCTGTTGAATATATCCCATATGATAAGAGACTaGCTCTTTGCTACAGAGAACCAGAATGAAGAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSLLNISHMIRD*LFATENQNEES Trigger: TGACTCTTCATTCTGGTTCTCTGTAGCAAAGAGTCAGTCTCTTATCATATGGGATATATTCAACAGGCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | GAAAAGAATATCAGTTCTCCATCCCTTGACTTGAAGTaGCAAGTGACTTTTTACAAGATAAGCAGCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EKNISSPSLDLK*QVTFYKISSSF Trigger: GAAGCTGCTGCTTATCTTGTAAAAAGTCACTTGTCACTTCAAGTCAAGGGATGGAGAACTGATATTCTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | GAGATTAGGATCCCACATGTTTATGCTGTTTGTTTTTaGGATAGCCCTGCACATTCCCTTTTATTTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EIRIPHVYAVCF*DSPAHSLLFGF Trigger: AAAACCAAATAAAAGGGAATGTGCAGGGCTATCCCAAAAACAAACAGCATAAACATGTGGGATCCTAATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR TCA 72 bp | AGCAGGATCAGAAAAGAATATCAGTTCTCCATCCCTTaGCTTGAAGTGACAAGTGACTTTTTACAAGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRIRKEYQFSIP*LEVTSDFLQDK Trigger: CTTATCTTGTAAAAAGTCACTTGTCACTTCAAGTCAAGGGATGGAGAACTGATATTCTTTTCTGATCCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CCA 72 bp | CTAATTTCCACCAAGTTTCTACATAAGTTTCTGCTTTaGTTTTCCTGTCTCATTTGGATTTGTCTGGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LISTKFLHKFLL*FSCLIWICLVR Trigger: TCTAACCAGACAAATCCAAATGAGACAGGAAAACCAAAGCAGAAACTTATGTAGAAACTTGGTGGAAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACCTCGCCGATGGCTGGTaGGTCGAGCCTGGTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYLADGW*VEPGQR Trigger: TCGCTGACCAGGCTCGACTCACCAGCCATCGGCGAG...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCAATGTCCGGGCGCAGTaGGGGCAGGTGGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGALPIHLSLPRGSLLSLNVRAQ*GQVGGV Trigger: AACACCTCCCACCTGCCCTCACTGCGCCCGGACATT...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCAAGTCAATGCCACACTaGGGACAGGAGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GALPIHLSLPRGSLLSLCKSMPH*GQEKGR Trigger: GCGCCCCTTCTCCTGTCCTCAGTGTGGCATTGACTT...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTGCACAGCCTCCACTGTaGCCGGTCCGTAGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPYTCLCLEAVCSHSATAQPPL*PVRRWS Trigger: GGACCACCTACGGACCGGTCACAGTGGAGGCTGTGC...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCTGGTCTACAAAGCAAAGTTCCAGGCCTGGATACACAGTGAGGCCCAACCGCAGTGCGGACACTaGAAAGGCCGCTCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYKAKFQAWIHSEAQPQCGH*KGRSPV Trigger: CACAGGTGAGCGGCCTTTCCAGTGTCCGCACTGCGG...TTGGGCCTCACTGTGTATCCAGGCCTGGAACTTTGCTTTGTAGACCAGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTGCACAGCCTCCACTGTaGCCGGTCCGTAGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTAQPPL*PVRRWS Trigger: GGACCACCTACGGACCGGTCACAGTGGAGGCTGTGC...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCCCACAGGGAAATGGCTaGAGTCTGCAGATGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GALPIHLSLPRGSLLSLCPQGNG*SLQMCL Trigger: GAGGCACATCTGCAGACTGCAGCCATTTCCCTGTGG...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCAGGAGTCGCCGGCTGTaGACCTCCACTTTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGALPIHLSLPRGSLLSLRSRRL*TSTFLS Trigger: AGAGAGGAAAGTGGAGGTCCACAGCCGGCGACTCCT...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTAAATGTCCGGGCGCAGTaGGGGCAGGTGGGAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLNVRAQ*GQVGGV Trigger: AACACCTCCCACCTGCCCTCACTGCGCCCGGACATT...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACCTGCTGTCCCTGTCCTaGCTTCTAGATGGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYLLSLS*LLDGGV Trigger: GACTCCTCCATCTAGAAGGCAGGACAGGGACAGCAG...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCGCTTGTGGGGTGAAGTaGTTAGGACACTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FGALPIHLSLPRGSLLSLACGVK*LGHWAQ Trigger: CTGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGC...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCGGGTGGAAAAGTAGATaGAGACGTCATCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GALPIHLSLPRGSLLSLCGWKSR*RRHRRP Trigger: TGGCCTTCGATGACGTCTCCATCTACTTTTCCACCC...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACCTTCAGGCAGGTCAGTaGCCGTTCGTGCAAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYLQAGQ*PFVQKV Trigger: CACCTTTTGCACGAACGGCCACTGACCTGCCTGAAG...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCAGACTCTTGCCACAATaGTGGCATGAGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GALPIHLSLPRGSLLSLCRLLPQ*WHENTC Trigger: GCAGGTGTTCTCATGCCACCATTGTGGCAAGAGTCT...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCGTGTGGATCATTTGGTaGCGAATCAATGCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GALPIHLSLPRGSLLSLCVWIIW*RINAEW Trigger: CCACTCTGCATTGATTCGTCACCAAATGATCCACAC...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCGTCAGTGGCCGTTCGTaGAAAAGGTGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGVSGRS*KRCHGG Trigger: ACCCCCATGGCACCTTTTGCACGAACGGCCACTGAC...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTTGCAGTCTGCAGATGTaGCTCATTTGCTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPYTCLCLEAVCSHSATCSLQM*LICCWR Trigger: CCTCCAGCAGCAAATGAGGCACATCTGCAGACTGCA...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTGGCTGCTGCTGGTGGTaGAGCAGAGAAGGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTGCCWW*SREGYW Trigger: CCAGTAGCCTTCTCTGCTCCACCACCAGCAGCAGCC...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTCACCTGCTCTCCAACTaGAGGTGGGAGTGGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTHLLSN*RWEWVT Trigger: AGTTACCCACTCCCACCTCCAGTTGGAGAGCAGGTG...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCCATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGALPIHLSLPRGSLLSLHNPWR*ETRSCP Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTATGCAGAGTGGCCATTaGAGTCAATGCCACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPYTCLCLEAVCSHSATMQSGH*SQCHTE Trigger: CTCAGTGTGGCATTGACTTCAATGGCCACTCTGCAT...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCGCCATGGGGGTACACTaGTGGCTTTTGAAAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: FGALPIHLSLPRGSLLSLAMGVH*WLLKAI Trigger: TATAGCTTTCAAAAGCCAGCAGTGTACCCCCATGGC...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGTGTGTGTTCACTTTCATGTGGAGACCAGAGGACTTTGGGAGTTACTTCTTGCTACAGTCTGTaGACGGGTAGGGACGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DLCVCSLSCGDQRTLGVTSCYSL*TGRDAR Trigger: GCGAGCGTCCCTACCCGTGCACAGACTGTAGCAAGA...AGTAACTCCCAAAGTCCTCTGGTCTCCACATGAAAGTGAACACACACACAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTGTGCAAAAGGTGCCATaGGGGTACACTGCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTVQKVP*GYTAGF Trigger: AAAGCCAGCAGTGTACCCCCATGGCACCTTTTGCAC...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCTGGGAGGTGTTTCATTaGCATGATCCTGGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGWEVFH*HDPGRC Trigger: GCACCTCCCAGGATCATGCCAATGAAACACCTCCCA...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTAGGTCAGCGAAGCGCTTaGGACAATCAGGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLGQRSA*DNQDRG Trigger: TCCTCTGTCCTGATTGTCCCAAGCGCTTCGCTGACC...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTGTCGTGAGGGGTGAGTaGATGTCCGGGCGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIVVRGE*MSGRSE Trigger: CTCACTGCGCCCGGACATTCACTCACCCCTCACGAC...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTACTCGCCGATGGCTGGTaGGTCGAGCCTGGTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVLADGW*VEPGQR Trigger: TCGCTGACCAGGCTCGACTCACCAGCCATCGGCGAG...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTGGGTGGAAAAGTAGATaGAGACGTCATCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTGWKSR*RRHRRP Trigger: TGGCCTTCGATGACGTCTCCATCTACTTTTCCACCC...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTAATCTCACTTGCTTCTaGCCTTGGCTGGTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPYTCLCLEAVCSHSATNLTCF*PWLVIC Trigger: ACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATT...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTCTCTTGCCACAATGGTaGCATGAGAACACCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTLLPQW*HENTCS Trigger: AGAGCAGGTGTTCTCATGCCACCATTGTGGCAAGAG...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTAGGCCTAGGAATGCAGCCTCAGTCATCACGTCTCAGGGAAAGGTGACTAGACTCTTGCCACAATaGTGGCATGAGAACACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRNAASVITSQGKVTRLLPQ*WHENTC Trigger: GCAGGTGTTCTCATGCCACCATTGTGGCAAGAGTCT...AGTCACCTTTCCCTGAGACGTGATGACTGAGGCTGCATTCCTAGGCCTAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGAGGCAGGGGCAAACAAGGTAGAAATCCTTTCCTTAAGAGCATCAGGTCAGCGAAGCGCTTaGGACAATCAGGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TASEAGANKVEILSLRASGQRSA*DNQDRG Trigger: TCCTCTGTCCTGATTGTCCCAAGCGCTTCGCTGACC...TGATGCTCTTAAGGAAAGGATTTCTACCTTGTTTGCCCCTGCCTCACTGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | CTCCTTGCTACTCAGGCAACTGCAGAGGCTGCTTTCTaGTCCAAGAAGCTGAAGCATAAGAGGAGGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLATQATAEAAF*SKKLKHKRREG Trigger: TCCTTCCCTCCTCTTATGCTTCAGCTTCTTGGACAAGAAAGCAGCCTCTGCAGTTGCCTGAGTAGCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTCGTGAGGGGTGAGTaGATGTCCGGGCGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEVVRGE*MSGRSE Trigger: CTCACTGCGCCCGGACATTCACTCACCCCTCACGAC...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTGTCCTGCCTTCTAGATaGAGGAGTCGCCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIVLPSR*RSRRLW Trigger: CCACAGCCGGCGACTCCTCCATCTAGAAGGCAGGAC...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCAGCAGAGAAGGCTACTaGAACTTCAGGACACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGSREGY*NFRTQG Trigger: TCCTTGTGTCCTGAAGTTCCAGTAGCCTTCTCTGCT...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTCTGGTGAGTCGAGCCTaGTCAGCGAAGCGCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSLVSRA*SAKRLG Trigger: TCCCAAGCGCTTCGCTGACCAGGCTCGACTCACCAG...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGCCGCAGTGCGGACACTaGAAAGGCCGCTCACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEPQCGH*KGRSPV Trigger: CACAGGTGAGCGGCCTTTCCAGTGTCCGCACTGCGG...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTTTAACATGTCTTGACTaGGACTCTTGCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPYTCLCLEAVCSHSATLTCLD*DSCHNG Trigger: ACCATTGTGGCAAGAGTCTCAGTCAAGACATGTTAA...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTACCTTCCCCATACCACTaGCTAGATTCTAGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLPSPYH*LDSRPS Trigger: TGAAGGTCTAGAATCTAGTCAGTGGTATGGGGAAGG...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCGGAACTTGTGGGCTCTCTCCTGGACTTTCTGCTCTGCTGTGAACATACCTTCCCCATACCACTaGCTAGATTCTAGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RFRNLWALSWTFCSAVNIPSPYH*LDSRPS Trigger: TGAAGGTCTAGAATCTAGTCAGTGGTATGGGGAAGG...TATGTTCACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTAGAAATGGCTGCAGTCTaGAGATGTGCCTCATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLEMAAV*RCASFA Trigger: AGCAAATGAGGCACATCTGCAGACTGCAGCCATTTC...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGATTTGTCTGGTTAGAAGCCAAAGGGAGGACAGGATTTTGGCAGAGATGGCATGAGAACACCTaGTCTCCAACTGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGFVWLEAKGRTGFWQRWHENT*SPTGGG Trigger: CCCACCTCCAGTTGGAGAGCAGGTGTTCTCATGCCA...TCTCTGCCAAAATCCTGTCCTCCCTTTGGCTTCTAACCAGACAAATCCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTTCGGAACTTGTGGGCTCTCTCCTGGACTTTCTGCTCTGCTGTGAACATATTTCCCACTCTGGGGTaGAAAAGTAGATGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: RFRNLWALSWTFCSAVNIFPTLG*KSRWRR Trigger: ACGTCTCCATCTACTTTTCCACCCCAGAGTGGGAAA...TATGTTCACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTGGGGTCTCTGGGCTCTTTAGCTCCTAAACCTGGAGAGAAAACTCTCTTCCTAAGCAGAGAAGGCTACTaGAACTTCAGGACACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGSLGSLAPKPGEKTLFLSREGY*NFRTQG Trigger: TCCTTGTGTCCTGAAGTTCCAGTAGCCTTCTCTGCT...TAGGAAGAGAGTTTTCTCTCCAGGTTTAGGAGCTAAAGAGCCCAGAGACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTGGCTGCTGCTGGTGGTaGAGCAGAGAAGGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVDFQSTSMSLVECRSQIGCCWW*SREGYW Trigger: CCAGTAGCCTTCTCTGCTCCACCACCAGCAGCAGCC...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTCTTGGCTGCTGCTGGTaGTGGAGCAGAGAAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSLGCCW*WSREGY Trigger: GTAGCCTTCTCTGCTCCACCACCAGCAGCAGCCAAG...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATCCTTGGCTGCTGCTaGTGGTGGAGCAGAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVDFQSTSMSLVECRSQILGCC*WWSREG Trigger: GCCTTCTCTGCTCCACCACCAGCAGCAGCCAAGGAT...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGCTGGTGAGTCGAGCCTaGTCAGCGAAGCGCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSELVSRA*SAKRLG Trigger: TCCCAAGCGCTTCGCTGACCAGGCTCGACTCACCAG...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCCGAATCAATGCAGAGTaGCCATTGAAGTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGRINAE*PLKSMP Trigger: TGGCATTGACTTCAATGGCCACTCTGCATTGATTCG...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTGCCACAATGGTGGCATaGGAACACCTGCTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIATMVA*EHLLSN Trigger: GTTGGAGAGCAGGTGTTCTCATGCCACCATTGTGGC...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCGTTCGTGCAAAAGGTaGCATGGGGGTACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIRSCKR*HGGTLL Trigger: CAGCAGTGTACCCCCATGGCACCTTTTGCACGAACG...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTCGTTCGTGCAAAAGGTaGCATGGGGGTACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSRSCKR*HGGTLL Trigger: CAGCAGTGTACCCCCATGGCACCTTTTGCACGAACG...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTAGTCAGTGGCCGTTCGTaGAAAAGGTGCCATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVVSGRS*KRCHGG Trigger: ACCCCCATGGCACCTTTTGCACGAACGGCCACTGAC...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTTCTTGCTACAGTCTGTaGACGGGTAGGGACGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AVDFQSTSMSLVECRSQISCYSL*TGRDAR Trigger: GCGAGCGTCCCTACCCGTGCACAGACTGTAGCAAGA...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTGAGGCAGGGGCAAACAAGGTAGAAATCCTTTCCTTAAGAGCATCAAATCTCACTTGCTTCTaGCCTTGGCTGGTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TASEAGANKVEILSLRASNLTCF*PWLVIC Trigger: ACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATT...TGATGCTCTTAAGGAAAGGATTTCTACCTTGTTTGCCCCTGCCTCACTGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTAGTCACTTGTCCCTCTaGAGCTTCAGGCAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWISHLSL*SFRQVS Trigger: ACTGACCTGCCTGAAGCTTCAGAGGGACAAGTGACT...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTAGTCACTTGTCCCTCTaGAGCTTCAGGCAGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSSHLSL*SFRQVS Trigger: ACTGACCTGCCTGAAGCTTCAGAGGGACAAGTGACT...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTTGCAGGAATCTCACTTaGTTCTGGCCTTGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSCRNLT*FWPWLV Trigger: GACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCA...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGTGCATCCTTGGCTGCTaGTGGTGGTGGAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSECILGC*WWWSRE Trigger: TTCTCTGCTCCACCACCAGCAGCAGCCAAGGATGCA...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTTGCATCCTTGGCTGCTaGTGGTGGTGGAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVDFQSTSMSLVECRSQICILGC*WWWSRE Trigger: TTCTCTGCTCCACCACCAGCAGCAGCCAAGGATGCA...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTAAATGCATCCTTGGCTaGTGCTGGTGGTGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIKCILG*CWWWSR Trigger: TCTGCTCCACCACCAGCAGCAGCCAAGGATGCATTT...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATGGCATGAGAACACCTaGTCTCCAACTGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVWHENT*SPTGGG Trigger: CCCACCTCCAGTTGGAGAGCAGGTGTTCTCATGCCA...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGCTTGTGGGGTGAAGTaGTTAGGACACTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEACGVK*LGHWAQ Trigger: CTGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGC...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGATTTGTCTGGTTAGAAGCCAAAGGGAGGACAGGATTTTGGCAGAGAGGTGCTACCAACATCTaGTTGTGGGGTGAAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGFVWLEAKGRTGFWQRGATNI*LWGEVL Trigger: AAGCACTTCACCCCACAAGCAGATGTTGGTAGCACC...TCTCTGCCAAAATCCTGTCCTCCCTTTGGCTTCTAACCAGACAAATCCAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCACTTTCCTCTCTATaGCCTGCACAGCAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AVDFQSTSMSLVECRSQIPLSSL*PAQQPP Trigger: TGGTGGCTGCTGTGCAGGCCATAGAGAGGAAAGTGG...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGCACTTGCCATCCAGCTaGTTCCCAAGCTCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEHLPSS*FPSSAT Trigger: AGTGGCAGAGCTTGGGAACCAGCTGGATGGCAAGTG...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGATTTGTCTGGTTAGAAGCCAAAGGGAGGACAGGATTTTGGCAGAGAACTTGCTTCTGGCCTTaGCTGGTCATCTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGFVWLEAKGRTGFWQRTCFWP*LVICTV Trigger: CACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGT...TCTCTGCCAAAATCCTGTCCTCCCTTTGGCTTCTAACCAGACAAATCCAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACAGGATTTTGGCAGAGAACTATATCACAAGGTTTTTCTTTCTAAGATCCTTGGCTGCTGCTaGTGGTGGAGCAGAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGQDFGRELYHKVFLSKILGCC*WWSREG Trigger: GCCTTCTCTGCTCCACCACCAGCAGCAGCCAAGGAT...CTTAGAAAGAAAAACCTTGTGATATAGTTCTCTGCCAAAATCCTGTCCTCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAGTGCAAAAGGTGCCATaGGGGTACACTGCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVDFQSTSMSLVECRSQVQKVP*GYTAGF Trigger: AAAGCCAGCAGTGTACCCCCATGGCACCTTTTGCAC...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGAAAGTCAATGCCACACTaGGGACAGGAGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRKSMPH*GQEKGR Trigger: GCGCCCCTTCTCCTGTCCTCAGTGTGGCATTGACTT...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTATGCAGAGTGGCCATTaGAGTCAATGCCACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIMQSGH*SQCHTE Trigger: CTCAGTGTGGCATTGACTTCAATGGCCACTCTGCAT...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAACTCTTCACTGGGGTCTaGAGGAATCTCACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVDFQSTSMSLVECRSQLFTGV*RNLTCF Trigger: GAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAG...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTAAAATGCATCCTTGGCTaGTGCTGGTGGTGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVKCILG*CWWWSR Trigger: TCTGCTCCACCACCAGCAGCAGCCAAGGATGCATTT...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGACTTGGCTGCTGCTGGTaGTGGAGCAGAGAAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRLGCCW*WSREGY Trigger: GTAGCCTTCTCTGCTCCACCACCAGCAGCAGCCAAG...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTGACAAGTCAGAGGTGCTGGATTCTCTTCCAGTTTTCAAAATACAGTATTCTTCTTCAGGCAGGTCAGTaGCCGTTCGTGCAAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSQRCWILFQFSKYSILLQAGQ*PFVQKV Trigger: CACCTTTTGCACGAACGGCCACTGACCTGCCTGAAG...AAGAATACTGTATTTTGAAAACTGGAAGAGAATCCAGCACCTCTGACTTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTAAGTGCTTAGGACACTaGGCACAGGTTAAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIKCLGH*AQVKGC Trigger: ACACCCCTTAACCTGTGCCCAGTGTCCTAAGCACTT...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGTGGGAGGTGTTTCATTaGCATGATCCTGGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEWEVFH*HDPGRC Trigger: GCACCTCCCAGGATCATGCCAATGAAACACCTCCCA...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTGACAAGTCAGAGGTGCTGGATTCTCTTCCAGTTTTCAAAATACAGTATTCTTCGCAGTGAGGGCAGGTaGGAGGTGTTTCATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTSQRCWILFQFSKYSILRSEGR*EVFHWH Trigger: ATGCCAATGAAACACCTCCCACCTGCCCTCACTGCG...AAGAATACTGTATTTTGAAAACTGGAAGAGAATCCAGCACCTCTGACTTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACAGGATTTTGGCAGAGAACTATATCACAAGGTTTTTCTTTCTAAGCGCAGTGAGGGCAGGTaGGAGGTGTTTCATTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGGQDFGRELYHKVFLSKRSEGR*EVFHWH Trigger: ATGCCAATGAAACACCTCCCACCTGCCCTCACTGCG...CTTAGAAAGAAAAACCTTGTGATATAGTTCTCTGCCAAAATCCTGTCCTCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCCAGTGAGGCAGGGGCAAACAAGGTAGAAATCCTTTCCTTAAGAGCATCACGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TASEAGANKVEILSLRASRSCPS*YSCKVP Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...TGATGCTCTTAAGGAAAGGATTTCTACCTTGTTTGCCCCTGCCTCACTGGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTCATAATCCATGGAGATaGGAGACTCGTAGTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSHNPWR*ETRSCP Trigger: AGGGCAACTACGAGTCTCTCATCTCCATGGATTATG...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGAGCCACAATGGTGGCATaGGAACACCTGCTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRATMVA*EHLLSN Trigger: GTTGGAGAGCAGGTGTTCTCATGCCACCATTGTGGC...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTTGCAGGAATCTCACTTaGTTCTGGCCTTGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSCRNLT*FWPWLV Trigger: GACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCA...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTAGGTGCTACCAACATCTaGTTGTGGGGTGAAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVGATNI*LWGEVL Trigger: AAGCACTTCACCCCACAAGCAGATGTTGGTAGCACC...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGCATGATCCTGGGAGGTaGTACCAACATCTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEHDPGR*YQHLLV Trigger: CACAAGCAGATGTTGGTAGCACCTCCCAGGATCATG...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAGGCCACAGGCACCTTTaGGATATCTCCTTTAATACC | + |
|
Preference number: 4 (lower is better) Translates to: TAVDFQSTSMSLVECRSQGHRHL*DISFNT Trigger: GGTATTAAAGGAGATATCCCAAAGGTGCCTGTGGCC...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTAGCTTCTGGCCTTGGCTaGTCATCTGTACTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVASGLG*SSVLCS Trigger: AGAACACAGTACAGATGACCAGCCAAGGCCAGAAGC...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGCTTCTGGCCTTGGCTaGTCATCTGTACTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHILLCNSAFVVSDKSEASGLG*SSVLCS Trigger: AGAACACAGTACAGATGACCAGCCAAGGCCAGAAGC...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGACACCTGCTCTCCAACTaGAGGTGGGAGTGGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRHLLSN*RWEWVT Trigger: AGTTACCCACTCCCACCTCCAGTTGGAGAGCAGGTG...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | AATGGGGTCTACTTGTTAGGAGATTGGCTTAAGTCCTaGCTCTTAGCCAGACTAGAGATTAGGATCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NGVYLLGDWLKS*LLARLEIRIPH Trigger: ATGTGGGATCCTAATCTCTAGTCTGGCTAAGAGCAAGGACTTAAGCCAATCTCCTAACAAGTAGACCCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | ATTAGACTCAGGTGCTCATGCTTGCATGGCAAGCACTaGACTGAGTTATCACTCCAGTCCCTAATTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRLRCSCLHGKH*TELSLQSLILN Trigger: GTTCAAAATTAGGGACTGGAGTGATAACTCAGTCAAGTGCTTGCCATGCAAGCATGAGCACCTGAGTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTAGTGTGGATCATTTGGTaGCGAATCAATGCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVVWIIW*RINAEW Trigger: CCACTCTGCATTGATTCGTCACCAAATGATCCACAC...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGGACAGGATTTTGGCAGAGAACTATATCACAAGGTTTTTCTTTCTAAGCTCTTCACTGGGGTCTaGAGGAATCTCACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGGQDFGRELYHKVFLSKLFTGV*RNLTCF Trigger: GAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAG...CTTAGAAAGAAAAACCTTGTGATATAGTTCTCTGCCAAAATCCTGTCCTCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | CTGACAAGTCAGAGGTGCTGGATTCTCTTCCAGTTTTCAAAATACAGTATTCTTCATGATCCTGGGAGGTaGTACCAACATCTGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSQRCWILFQFSKYSILHDPGR*YQHLLV Trigger: CACAAGCAGATGTTGGTAGCACCTCCCAGGATCATG...AAGAATACTGTATTTTGAAAACTGGAAGAGAATCCAGCACCTCTGACTTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTCTCTTGCCACAATGGTaGCATGAGAACACCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSLLPQW*HENTCS Trigger: AGAGCAGGTGTTCTCATGCCACCATTGTGGCAAGAG...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | TTATGTAACAGATATAATTACTGTAGGTTTCGGAACTaGTGGGCTCTCTCCTGGACTTTCTGCTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCNRYNYCRFRN*WALSWTFCSAV Trigger: CACAGCAGAGCAGAAAGTCCAGGAGAGAGCCCACAAGTTCCGAAACCTACAGTAATTATATCTGTTACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | CTCTGCTACTCTGACAGGATGATCAGAAGCCATATCTaGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCYSDRMIRSHI*LCNSAFVVSDK Trigger: CTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGAGTAGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGACTGGTTCCCAAGCTCTaGCACTGTCTTTTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRLVPKL*HCLFTA Trigger: AGCTGTGAAAAGACAGTGGCAGAGCTTGGGAACCAG...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CCA 90 bp | AATACAGTATTCTTATACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTACTTGCTTCTGGCCTTaGCTGGTCATCTGTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTVFLYCCGFPKHKHVSSTCFWP*LVICTV Trigger: CACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGT...ACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAATACTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATGGGGGTACACTGCTaGCTTTTGAAAGCTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVDFQSTSMSLVECRSQMGVHC*LLKAIS Trigger: AGATATAGCTTTCAAAAGCCAGCAGTGTACCCCCAT...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AATACAGTATTCTTATACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTAAGTGCTTAGGACACTaGGCACAGGTTAAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTVFLYCCGFPKHKHVSSKCLGH*AQVKGC Trigger: ACACCCCTTAACCTGTGCCCAGTGTCCTAAGCACTT...ACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAATACTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTACGAATCAATGCAGAGTaGCCATTGAAGTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVRINAE*PLKSMP Trigger: TGGCATTGACTTCAATGGCCACTCTGCATTGATTCG...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | AATGAACCTGGAAACCTGATTTGGGGGATTTGGCAATaGATCCCAATATACTATGGGTCTACTACCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NEPGNLIWGIWQ*IPIYYGSTTII Trigger: GATGATGGTAGTAGACCCATAGTATATTGGGATCAATTGCCAAATCCCCCAAATCAGGTTTCCAGGTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR GCA 90 bp | AATACAGTATTCTTATACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTGCCATGGGGGTACACTaGTGGCTTTTGAAAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: NTVFLYCCGFPKHKHVSSAMGVH*WLLKAI Trigger: TATAGCTTTCAAAAGCCAGCAGTGTACCCCCATGGC...ACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAATACTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGATTTCCCACTCTGGGGTaGAAAAGTAGATGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRFPTLG*KSRWRR Trigger: ACGTCTCCATCTACTTTTCCACCCCAGAGTGGGAAA...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTTTAACATGTCTTGACTaGGACTCTTGCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSLTCLD*DSCHNG Trigger: ACCATTGTGGCAAGAGTCTCAGTCAAGACATGTTAA...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCACACTGGTTCTTTAAACTGTGCTGCAGGTTTTTAAGCTCTAATACCTCTATGGGGGTACACTGCTaGCTTTTGAAAGCTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSHWFFKLCCRFLSSNTSMGVHC*LLKAIS Trigger: AGATATAGCTTTCAAAAGCCAGCAGTGTACCCCCAT...AGAGGTATTAGAGCTTAAAAACCTGCAGCACAGTTTAAAGAACCAGTGTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | GACTTTTTACAAGATAAGCAGCAGCTTCCAGGTTCTTaGAACAAGGACACTAAGCTTTGGCCTTATGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DFLQDKQQLPGS*NKDTKLWPYDS Trigger: ACTATCATAAGGCCAAAGCTTAGTGTCCTTGTTCAAAGAACCTGGAAGCTGCTGCTTATCTTGTAAAAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGGATGATCAGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATACACTGCTGGCTTTTaGAAGCTATATCTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SDRMIRSHILLCNSAFVVYTAGF*KLYLKM Trigger: CATTTTCAGATATAGCTTTCAAAAGCCAGCAGTGTA...TACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCTGATCATCCTGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | ATTTGTCTGGTTAGAAGCCAAAGGGAGGACAGGATTTaGGCAGAGAACTATATCACAAGGTTTTTCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ICLVRSQREDRI*AENYITRFFFL Trigger: TAGAAAGAAAAACCTTGTGATATAGTTCTCTGCCAAAATCCTGTCCTCCCTTTGGCTTCTAACCAGACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS-3UTR TCA 90 bp | AGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTCCTTTATGTAACAGACGTAGTTGCCCTTCATaGTATTCTTGTAAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STSMSLVECRSQIPLCNRRSCPS*YSCKVP Trigger: AGGAACTTTACAAGAATATCATGAAGGGCAACTACG...TCTGTTACATAAAGGAATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| 3UTR CAA 72 bp | AAGCACTTGACTGAGTTATCACTCCAGTCCCTAATTTaGAACTCCCAAATATATTGTTTACAGAAGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHLTELSLQSLI*NSQIYCLQKPE Trigger: TTCAGGCTTCTGTAAACAATATATTTGGGAGTTCAAAATTAGGGACTGGAGTGATAACTCAGTCAAGTGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS GCA 90 bp | GCCTGCACAGCAGCCACCACTGTCCACAGGGAAATGGCTGCAGTCTaGAGATGTGCCTCATTTGCTGCTGGAGGTGTAGGAAGAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACTAATTVHREMAAV*RCASFAAGGVGRGR Trigger: CCTTCCTCTTCCTACACCTCCAGCAGCAAATGAGGCACATCTGCAGACTGCAGCCATTTCCCTGTGGACAGTGGTGGCTGCTGTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACGGGCGCTCTGTGCTGTaGTGTACCCGAAGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYGRSVL*CTRRWY Trigger: ATACCACCTTCGGGTACACAACAGCACAGAGCGCCC...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTTACGCATGAAGCTCTaGCTACAGTCTGTGCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: GALPIHLSLPRGSLLSLCLRMKL*LQSVHG Trigger: CCCGTGCACAGACTGTAGCAAGAGCTTCATGCGTAA...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS TCA 90 bp | CGCCTGTGTGGATCATTTGGTGACGAATCAATGCAGAGTGGCCATTaGAGTCAATGCCACACTGAGGACAGGAGAAGGGGCGCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLCGSFGDESMQSGH*SQCHTEDRRRGAPG Trigger: CCCAGGAGCGCCCCTTCTCCTGTCCTCAGTGTGGCATTGACTTCAATGGCCACTCTGCATTGATTCGTCACCAAATGATCCACACAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS GCA 90 bp | AGATGTGCCTCATTTGCTGCTGGAGGTGTAGGAAGAGGAAGGGGCTaGAGGGATGTAAGGCATTCCGAGTCCCATTCAGAAGTCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCASFAAGGVGRGRG*RDVRHSESHSEVGA Trigger: CGCTCCGACTTCTGAATGGGACTCGGAATGCCTTACATCCCTGCAGCCCCTTCCTCTTCCTACACCTCCAGCAGCAAATGAGGCACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS-3UTR CAA 90 bp | GCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACCTGCAGGAATCTCACTaGCTTCTGGCCTTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALPIHLSLPRGSLLSLCYLQESH*LLALAG Trigger: ACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAG...GTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS CCA 90 bp | ATGAAGCAGGAGACTGATCTTAAGGCTGAAGCTACGACCACACTGTaGGCAACGAAAGGGCCTCTCAGTAGCATGAGCTCGCCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MKQETDLKAEATTTL*ATKGPLSSMSSPMA Trigger: AGCCATCGGCGAGCTCATGCTACTGAGAGGCCCTTTCGTTGCCCACAGTGTGGTCGTAGCTTCAGCCTTAAGATCAGTCTCCTGCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | CTCCGAGGTAAACAGGGGGTGTGGGAACAAAAGCTTTCTGTCCCAAATGTTGGCCTGCAGGAATCTCACTaGCTTCTGGCCTTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRGKQGVWEQKLSVPNVGLQESH*LLALAG Trigger: ACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAG...GCCAACATTTGGGACAGAAAGCTTTTGTTCCCACACCCCCTGTTTACCTCGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114598.3 |
||
| CDS CCA 90 bp | AAGGCCAGGCTCTTCACTGGGGTCTGCAGGAATCTCACTTGCTTCTaGCCTTGGCTGGTCATCTGTACTGTGTTCTCCTTCTGGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KARLFTGVCRNLTCF*PWLVICTVFSFWLN Trigger: ATTCAACCAGAAGGAGAACACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAGCCTGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCACAGAATATCTGAGGTaGAAAGGCCAGGCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FGALPIHLSLPRGSLLSLTEYLR*KGQALH Trigger: GTGAAGAGCCTGGCCTTTCAACCTCAGATATTCTGT...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCGCCTGTGTGGATCATTaGGTGACGAATCAATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGALPIHLSLPRGSLLSLACVDH*VTNQCR Trigger: TCTGCATTGATTCGTCACCAAATGATCCACACAGGC...GAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS CCA 90 bp | AGGCTCTTCACTGGGGTCTGCAGGAATCTCACTTGCTTCTGGCCTTaGCTGGTCATCTGTACTGTGTTCTCCTTCTGGTTGAATCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLFTGVCRNLTCFWP*LVICTVFSFWLNLR Trigger: TCTCAGATTCAACCAGAAGGAGAACACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCCTGAGGTTCTTCCTCTaGTTTAATCCAAGACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GALPIHLSLPRGSLLSLCLRFFL*FNPRQN Trigger: ATTCTGTCTTGGATTAAACAAGAGGAAGAACCTCAG...GCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS TCA 90 bp | GTTCAGCAGCATGGCCACACTGATGTGTCATTAACATGTCTTGACTaGGACTCTTGCCACAATGGTGGCATGAGAACACCTGCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VQQHGHTDVSLTCLD*DSCHNGGMRTPALQ Trigger: TTGGAGAGCAGGTGTTCTCATGCCACCATTGTGGCAAGAGTCTCAGTCAAGACATGTTAATGACACATCAGTGTGGCCATGCTGCTGAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTCTTGGTCAGCGAAGCGCTaGGGACAATCAGGACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCNSAFVVSDKSEVLDSWSAKR*GQSGQR Trigger: CCTCTGTCCTGATTGTCCCAAGCGCTTCGCTGACCA...AGAATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCCATACACCTGTCTCTGCCTAGAGGCAGTCTGCTCTCACTCTGCTACTCTGAGGTTCTTCCTCTaGTTTAATCCAAGACAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFPYTCLCLEAVCSHSATLRFFL*FNPRQN Trigger: ATTCTGTCTTGGATTAAACAAGAGGAAGAACCTCAG...AGTAGCAGAGTGAGAGCAGACTGCCTCTAGGCAGAGACAGGTGTATGGGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTGGGCGCTCTGTGCTGTaGTGTACCCGAAGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: AVDFQSTSMSLVECRSQIGRSVL*CTRRWY Trigger: ATACCACCTTCGGGTACACAACAGCACAGAGCGCCC...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGTGGTCAGCGAAGCGCTaGGGACAATCAGGACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHILLCNSAFVVSDKSEWSAKR*GQSGQR Trigger: CCTCTGTCCTGATTGTCCCAAGCGCTTCGCTGACCA...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCATATCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGCACTTGCTTCTGGCCTaGGCTGGTCATCTGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSHILLCNSAFVVSDKSEHLLLA*AGHLYC Trigger: ACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTG...CTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGATATGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAATTTTACGCATGAAGCTCTaGCTACAGTCTGTGCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVDFQSTSMSLVECRSQILRMKL*LQSVHG Trigger: CCCGTGCACAGACTGTAGCAAGAGCTTCATGCGTAA...AATTTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS TCA 90 bp | CCTTTGTACAGCTCACTCTCTTTAGACTCCTGGGAGACTCCAACCTaGGGTTCTTCCTCTTGTTTAATCCAAGACAGAATATCTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLYSSLSLDSWETPT*GSSSCLIQDRISEV Trigger: AACCTCAGATATTCTGTCTTGGATTAAACAAGAGGAAGAACCTCAGGTTGGAGTCTCCCAGGAGTCTAAAGAGAGTGAGCTGTACAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTTGAGTGTAGATCTCAAACAGAATATCTGAGGTaGAAAGGCCAGGCTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAVDFQSTSMSLVECRSQTEYLR*KGQALH Trigger: GTGAAGAGCCTGGCCTTTCAACCTCAGATATTCTGT...TTGAGATCTACACTCAACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | AATACAGTATTCTTATACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTGCCTGTGTGGATCATTaGGTGACGAATCAATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTVFLYCCGFPKHKHVSSACVDH*VTNQCR Trigger: TCTGCATTGATTCGTCACCAAATGATCCACACAGGC...ACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAATACTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | TCTTGCTTTGTAACTCTGCTTTTGTGGTATCTGACAAGTCAGAGGTGCTGGATTGTACACTGCTGGCTTTaGAAAGCTATATCTGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCFVTLLLWYLTSQRCWIVHCWL*KAISEN Trigger: ATTTTCAGATATAGCTTTCAAAAGCCAGCAGTGTAC...AATCCAGCACCTCTGACTTGTCAGATACCACAAAAGCAGAGTTACAAAGCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS-3UTR CAA 90 bp | AATACAGTATTCTTATACTGCTGTGGATTTCCAAAGCACAAGCATGTCTCTAGTGTACACTGCTGGCTTTaGAAAGCTATATCTGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NTVFLYCCGFPKHKHVSSVHCWL*KAISEN Trigger: ATTTTCAGATATAGCTTTCAAAAGCCAGCAGTGTAC...ACTAGAGACATGCTTGTGCTTTGGAAATCCACAGCAGTATAAGAATACTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS TCA 72 bp | ACGGAAGGGTCCCTATCACCCGCACAGCCTCCACTGTaGCCGGTCCGTAGGTGGTCCTTGAGCGTCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TEGSLSPAQPPL*PVRRWSLSVCL Trigger: CAAGCAGACGCTCAAGGACCACCTACGGACCGGTCACAGTGGAGGCTGTGCGGGTGATAGGGACCCTTCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS CAA 72 bp | CGATGGCTGGTGAGTCGAGCCTGGTCAGCGAAGCGCTaGGGACAATCAGGACAGAGGAAAGGGCGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWLVSRAWSAKR*GQSGQRKGRSV Trigger: CACAGAGCGCCCTTTCCTCTGTCCTGATTGTCCCAAGCGCTTCGCTGACCAGGCTCGACTCACCAGCCATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
||
| CDS CCA 72 bp | CCTGTCCTGCCTTCTAGATGGAGGAGTCGCCGGCTGTaGACCTCCACTTTCCTCTCTATGGCCTGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVLPSRWRSRRL*TSTFLSMACTA Trigger: TGCTGTGCAGGCCATAGAGAGGAAAGTGGAGGTCCACAGCCGGCGACTCCTCCATCTAGAAGGCAGGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079881.11 |
||
| CDS TCA 72 bp | TGTGCTGTTGTGTACCCGAAGGTGGTATGTGAGTCGTaGGGGGTGAGTGAATGTCCGGGCGCAGTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CAVVYPKVVCES*GVSECPGAVRA Trigger: TGCCCTCACTGCGCCCGGACATTCACTCACCCCTCACGACTCACATACCACCTTCGGGTACACAACAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CCA 72 bp | TCCGGGCGCAGTGAGGGCAGGTGGGAGGTGTTTCATTaGCATGATCCTGGGAGGTGCTACCAACATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SGRSEGRWEVFH*HDPGRCYQHLL Trigger: AAGCAGATGTTGGTAGCACCTCCCAGGATCATGCCAATGAAACACCTCCCACCTGCCCTCACTGCGCCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS TCA 72 bp | ATCAATGCAGAGTGGCCATTGAAGTCAATGCCACACTaGGGACAGGAGAAGGGGCGCTCCTGGGCATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: INAEWPLKSMPH*GQEKGRSWACP Trigger: GGGACATGCCCAGGAGCGCCCCTTCTCCTGTCCTCAGTGTGGCATTGACTTCAATGGCCACTCTGCATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CCA 72 bp | CTTGGCTGCTGCTGGTGGTGGAGCAGAGAAGGCTACTaGAACTTCAGGACACAAGGAAGCTCTAGCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LGCCWWWSREGY*NFRTQGSSSKV Trigger: GACCTTGCTAGAGCTTCCTTGTGTCCTGAAGTTCCAGTAGCCTTCTCTGCTCCACCACCAGCAGCAGCCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CCA 72 bp | CCAACATCTGCTTGTGGGGTGAAGTGCTTAGGACACTaGGCACAGGTTAAGGGGTGTTCAGCAGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTSACGVKCLGH*AQVKGCSAAWP Trigger: TGGCCATGCTGCTGAACACCCCTTAACCTGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGCAGATGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS GCA 72 bp | TGGGAGGTGCTACCAACATCTGCTTGTGGGGTGAAGTaGTTAGGACACTGGGCACAGGTTAAGGGGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: WEVLPTSACGVK*LGHWAQVKGCS Trigger: TGAACACCCCTTAACCTGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGCAGATGTTGGTAGCACCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CCA 72 bp | GAGACTGATCTTAAGGCTGAAGCTACGACCACACTGTaGGCAACGAAAGGGCCTCTCAGTAGCATGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ETDLKAEATTTL*ATKGPLSSMSS Trigger: CGAGCTCATGCTACTGAGAGGCCCTTTCGTTGCCCACAGTGTGGTCGTAGCTTCAGCCTTAAGATCAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CAA 72 bp | ATTGGCATGATCCTGGGAGGTGCTACCAACATCTGCTaGTGGGGTGAAGTGCTTAGGACACTGGGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: IGMILGGATNIC*WGEVLRTLGTG Trigger: ACCTGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGCAGATGTTGGTAGCACCTCCCAGGATCATGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CAA 90 bp | AGGTTGAAAGGCCAGGCTCTTCACTGGGGTCTGCAGGAATCTCACTaGCTTCTGGCCTTGGCTGGTCATCTGTACTGTGTTCTCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RLKGQALHWGLQESH*LLALAGHLYCVLLL Trigger: CAGAAGGAGAACACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAGCCTGGCCTTTCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS GCA 72 bp | TTCATTGGCATGATCCTGGGAGGTGCTACCAACATCTaGTTGTGGGGTGAAGTGCTTAGGACACTGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: FIGMILGGATNI*LWGEVLRTLGT Trigger: TGTGCCCAGTGTCCTAAGCACTTCACCCCACAAGCAGATGTTGGTAGCACCTCCCAGGATCATGCCAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CCA 72 bp | CTCTTCACTGGGGTCTGCAGGAATCTCACTTGCTTCTaGCCTTGGCTGGTCATCTGTACTGTGTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFTGVCRNLTCF*PWLVICTVFSF Trigger: GAAGGAGAACACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS CAA 90 bp | CAGGCTCTTCACTGGGGTCTGCAGGAATCTCACTTGCTTCTGGCCTaGGCTGGTCATCTGTACTGTGTTCTCCTTCTGGTTGAATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QALHWGLQESHLLLA*AGHLYCVLLLVESE Trigger: CTCAGATTCAACCAGAAGGAGAACACAGTACAGATGACCAGCCAAGGCCAGAAGCAAGTGAGATTCCTGCAGACCCCAGTGAAGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS TCA 72 bp | GGATCATTTGGTGACGAATCAATGCAGAGTGGCCATTaGAGTCAATGCCACACTGAGGACAGGAGAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GSFGDESMQSGH*SQCHTEDRRRG Trigger: GCCCCTTCTCCTGTCCTCAGTGTGGCATTGACTTCAATGGCCACTCTGCATTGATTCGTCACCAAATGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS TCA 72 bp | CATGGCCACACTGATGTGTCATTAACATGTCTTGACTaGGACTCTTGCCACAATGGTGGCATGAGAACACCT | + |
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Preference number: 6 (lower is better) Translates to: HGHTDVSLTCLD*DSCHNGGMRTP Trigger: AGGTGTTCTCATGCCACCATTGTGGCAAGAGTCTCAGTCAAGACATGTTAATGACACATCAGTGTGGCCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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| CDS TCA 72 bp | AGCTCACTCTCTTTAGACTCCTGGGAGACTCCAACCTaGGGTTCTTCCTCTTGTTTAATCCAAGACAGAATA | + |
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Preference number: 6 (lower is better) Translates to: SSLSLDSWETPT*GSSSCLIQDRI Trigger: TATTCTGTCTTGGATTAAACAAGAGGAAGAACCTCAGGTTGGAGTCTCCCAGGAGTCTAAAGAGAGTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079881.11 ENSMUST00000114598.3 |
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