Pregenerated sensors for ZFP397 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024276Ensembl transcript IDs: ENSMUST00000060762.6
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGTAAGTCCATaGTTGGGGCACAGATCCGTAAGATCTCTTTATAAGGTCTGTCTA | + |
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Preference number: 1 (lower is better) Translates to: STSDRTAIEHLHVSP*LGHRSVRSLYKVCL Trigger: TAGACAGACCTTATAAAGAGATCTTACGGATCTGTGCCCCAATCATGGACTTACATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTATTTTTACAACTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGAGGGATGAGGAGGCTTaGGTTGATCAACTTTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: TYFYNSLLGFCSLPASPGRDEEA*VDQLSP Trigger: AGGCGAAAGTTGATCAACTCAAGCCTCCTCATCCCT...CCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAAATAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR GCA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGTCGAACTCAGAAATCTaGCTGCCTCTGGGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RSSSHSPLQIELPLSTFMSNSEI*LPLGLS Trigger: AGACAAGCCCAGAGGCAGGCAGATTTCTGAGTTCGA...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTTACAGTACTCTTCTaGTGGATTCTTCAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: GELTHFWMRTLTNPLFIPLTVLF*WILQKR Trigger: CCTCTTCTGAAGAATCCATCAGAAGAGTACTGTAAG...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCAGCTAAGATGGAGAAATaGTGGAGAAGCAGCTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: GELTHFWMRTLTNPLFIPAKMEK*WRSSFR Trigger: TCTAAAGCTGCTTCTCCACCATTTCTCCATCTTAGC...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTATTTTTACAACTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGCCTGGCTTTCTTTCCTaGTTAACCCCTCAATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: TYFYNSLLGFCSLPASPGPGFLS*LTPQSS Trigger: TGAAGATTGAGGGGTTAACCAGGAAAGAAAGCCAGG...CCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAAATAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGAGCAGTCATGCTAAGATaGAGAAATGGTGGAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLDEDSHQSALHPTLHFRAVMLR*RNGGEA Trigger: TGCTTCTCCACCATTTCTCCATCTTAGCATGACTGC...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGTTTACAACTCTCTCTTaGGCTTCTGTTCCCTACCAG | + |
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Preference number: 2 (lower is better) Translates to: RSSSHSPLQIELPLSTFMFTTLS*ASVPYQ Trigger: CTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAA...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGCTCTTCATGGTGCTGTaGCTAAGGACTTTAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RSSSHSPLQIELPLSTFMLFMVL*LRTLGF Trigger: AAAACCTAAAGTCCTTAGTCACAGCACCATGAAGAG...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGGATTAACATTTAATAACAGAAGACATGTGTaGGGTATCTGGAGAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LSLGLLFPTSLTRGLTFNNRRHV*GIWRKS Trigger: GCTTTTTCTCCAGATACCTCACACATGTCTTCTGTT...ATTAAATGTTAATCCCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTATTTTTACAACTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGCAAGGACTCAGAAACTaGCAATTTTTGAATACCCGA | + |
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Preference number: 2 (lower is better) Translates to: TYFYNSLLGFCSLPASPGQGLRN*QFLNTR Trigger: TCGGGTATTCAAAAATTGTCAGTTTCTGAGTCCTTG...CCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAAATAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGAAGAGTTACTGAACCCTaGAATGTTGAATTGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FLDEDSHQSALHPTLHFRRVTEP*NVELRL Trigger: TAGCCTCAATTCAACATTTCAGGGTTCAGTAACTCT...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGGATTAACATTTAATGAAAAAGGCAGTGGGGACAGATaGGACTCTTCACTTTATAAA | + |
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Preference number: 2 (lower is better) Translates to: LGLLFPTSLTRGLTFNEKGSGDR*DSSLYK Trigger: TTTATAAAGTGAAGAGTCCCATCTGTCCCCACTGCC...TTTTTCATTAAATGTTAATCCCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGCCTGAAATGTTGAATTaGGGCTATGAAATGTCATGT | + |
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Preference number: 2 (lower is better) Translates to: RSSSHSPLQIELPLSTFMPEMLN*GYEMSC Trigger: ACATGACATTTCATAGCCTCAATTCAACATTTCAGG...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGATGGATTCTTCAGAAGAGGAAAAGTCCTGACTAGCAGTAATTATTACTTCCCAGCATGGCAGTaGGGACAGATGGGACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSDGFFRRGKVLTSSNYYFPAWQ*GQMGLF Trigger: GAAGAGTCCCATCTGTCCCCACTGCCATGCTGGGAA...GTAATAATTACTGCTAGTCAGGACTTTTCCTCTTCTGAAGAATCCATCAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CAA 90 bp | AGCAGTCTCTTAACGCCAACCATACTGTCTCACAAACCTGGTACATaGACAGTCAGATGTAGTGACAGAATGAAGCCTTTTCACATGACA | + |
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Preference number: 2 (lower is better) Translates to: SSLLTPTILSHKPGT*TVRCSDRMKPFHMT Trigger: TGTCATGTGAAAAGGCTTCATTCTGTCACTACATCTGACTGTCAATGTACCAGGTTTGTGAGACAGTATGGTTGGCGTTAAGAGACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGGATTAACATTTAATGAAAAACCCAATATTTTGAGATaGGGTCCTAGGTCCTATTAT | + |
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Preference number: 2 (lower is better) Translates to: LGLLFPTSLTRGLTFNEKPNILR*GPRSYY Trigger: ATAATAGGACCTAGGACCCCATCTCAAAATATTGGG...TTTTTCATTAAATGTTAATCCCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR GCA 90 bp | TTGTGCTCCCTGAATAGGGTTCTGATTTCAAATTCTGACTTTGTAGCTATAAGTTCAATTGGCCAGGAATaGTTCAACCTTGTCTCACCG | + |
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Preference number: 2 (lower is better) Translates to: LCSLNRVLISNSDFVAISSIGQE*FNLVSP Trigger: CGGTGAGACAAGGTTGAAGCATTCCTGGCCAATTGA...ACTTATAGCTACAAAGTCAGAATTTGAAATCAGAACCCTATTCAGGGAGCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTGATGGATTCTTCAGAAGAGGAAAAGTCCTGACTAGCAGTAATTATTACGAAACTGACAATTTTTaGATACCCGAGCTCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSDGFFRRGKVLTSSNYYETDNF*IPELRQ Trigger: CTGCCTGAGCTCGGGTATTCAAAAATTGTCAGTTTC...GTAATAATTACTGCTAGTCAGGACTTTTCCTCTTCTGAAGAATCCATCAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCATTTATCCCCAATATTTaGAGATGGGGTCCTAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GELTHFWMRTLTNPLFIPFIPNI*RWGPRS Trigger: GGACCTAGGACCCCATCTCAAAATATTGGGGATAAA...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CCA 72 bp | TACCCGAGCTCAGGCAGTCATGCTAAGATGGAGAAATaGTGGAGAAGCAGCTTTAGATACAGTTGCCGTAGA | + |
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Preference number: 3 (lower is better) Translates to: YPSSGSHAKMEK*WRSSFRYSCRR Trigger: TCTACGGCAACTGTATCTAAAGCTGCTTCTCCACCATTTCTCCATCTTAGCATGACTGCCTGAGCTCGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGATTTTACAACTCTCTCTaGGGCTTCTGTTCCCTACCA | + |
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Preference number: 3 (lower is better) Translates to: FLDEDSHQSALHPTLHFRFYNSL*GFCSLP Trigger: TGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAA...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGTGTAGAATCAGCAGCTaGGCTAATGGCAGAACAGAT | + |
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Preference number: 3 (lower is better) Translates to: RSSSHSPLQIELPLSTFMCRISS*ANGRTD Trigger: ATCTGTTCTGCCATTAGCCAAGCTGCTGATTCTACA...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCAGCAATGTTCCATGTTTaGTTCCTTCCATTAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: GELTHFWMRTLTNPLFIPAMFHV*FLPLNR Trigger: TCTGTTTAATGGAAGGAACAAAACATGGAACATTGC...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | TGGACACTCCTGCTTCATGCCTTCACTCTAGTTCCTGCTGGAGCTGTTTGTGACAAACATGTAAGTTACTaGCATAGGAGATCTGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: WTLLLHAFTLVPAGAVCDKHVSY*HRRSEG Trigger: CCCTTCAGATCTCCTATGCAAGTAACTTACATGTTT...GTCACAAACAGCTCCAGCAGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGAAAAATTTCATTAACATaGGGGAAGTGCCGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLDEDSHQSALHPTLHFRKISLT*GKCRTK Trigger: CTTTGTGCGGCACTTCCCCAATGTTAATGAAATTTT...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CCA 72 bp | TGCAGAGGTCATAGCAATACATGGCATGATAAGGAATaGACACTCCTGCTTCATGCCTTCACTCTAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CRGHSNTWHDKE*TLLLHAFTLVP Trigger: AGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCATTCCTTATCATGCCATGTATTGCTATGACCTCTGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | GATGTGATGCCAATTCTGAACTCAGTAGGCAATGTTCCATGTTTTGTTCCTTCCTGCCTGCCTCTGGGCTaGTCTTTAGATCAACAAATC | + |
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Preference number: 3 (lower is better) Translates to: DVMPILNSVGNVPCFVPSCLPLG*SLDQQI Trigger: GATTTGTTGATCTAAAGACAAGCCCAGAGGCAGGCA...GGAAGGAACAAAACATGGAACATTGCCTACTGAGTTCAGAATTGGCATCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGCCTTTATCCAAGTTCTaGGTCAAGGAAATAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: RSSSHSPLQIELPLSTFMPLSKF*VKEIGK Trigger: TTTTCCTATTTCCTTGACCAAGAACTTGGATAAAGG...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CCA 72 bp | GTACTTCCTTATTTAGAATCTGCTGGGCTTAGCCACTaGGTGAATAGGCTTGGTCATTGTCTTCTCCAAACT | + |
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Preference number: 3 (lower is better) Translates to: VLPYLESAGLSH*VNRLGHCLLQT Trigger: AGTTTGGAGAAGACAATGACCAAGCCTATTCACCCAGTGGCTAAGCCCAGCAGATTCTAAATAAGGAAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR TCA 72 bp | GATAGAACTGCCATTGAGCACCTTCATGTAAGTCCATaGTTGGGGCACAGATCCGTAAGATCTCTTTATAAG | + |
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Preference number: 3 (lower is better) Translates to: DRTAIEHLHVSP*LGHRSVRSLYK Trigger: CTTATAAAGAGATCTTACGGATCTGTGCCCCAATCATGGACTTACATGAAGGTGCTCAATGGCAGTTCTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR TCA 72 bp | AAGGTACTGCTAAATATCGCTAACAGAAGACATGTGTaGGGTATCTGGAGAAAAAGCCAAGGACTCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: KVLLNIANRRHV*GIWRKSQGLRN Trigger: GTTTCTGAGTCCTTGGCTTTTTCTCCAGATACCTCACACATGTCTTCTGTTAGCGATATTTAGCAGTACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | TTGTGCTCCCTGAATAGGGTTCTGATTTCAAATTCTGACTTTGTAGCTATAAGTAATTGCCTCGGAATCTaGCTCCAAAGTCAACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LCSLNRVLISNSDFVAISNCLGI*LQSQPF Trigger: AAAAGGTTGACTTTGGAGCAAGATTCCGAGGCAATT...ACTTATAGCTACAAAGTCAGAATTTGAAATCAGAACCCTATTCAGGGAGCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR-3UTR CAA 90 bp | TTAGGTCTGCAGATGATAAGCCACTTAAGGGAAATACAGAGTCAATCCTTCAGAATATACACAAAGCCCTaGGCAAACACCTTTTACATT | + |
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Preference number: 3 (lower is better) Translates to: LGLQMISHLREIQSQSFRIYTKP*ANTFYI Trigger: AATGTAAAAGGTGTTTGCCAAGGGCTTTGTGTATAT...TCTGAAGGATTGACTCTGTATTTCCCTTAAGTGGCTTATCATCTGCAGACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR TCA 72 bp | ATGCTTAAGCAGCAATCTTTAAAAGTCGTAATAGACTaGCTACATTGTCATTACCTGACTGGTAATAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: MLKQQSLKVVID*LHCHYLTGNSY Trigger: ATAGCTATTACCAGTCAGGTAATGACAATGTAGTCAGTCTATTACGACTTTTAAAGATTGCTGCTTAAGCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACCACTGTGTATCCTCTaGTGGGTAATCAGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GELTHFWMRTLTNPLFIPPLCIL*WVISSE Trigger: CTCAGAGCTGATTACCCATCAGAGGATACACAGTGG...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TGGACACTCCTGCTTCATGCCTTCACTCTAGTTCCTGCTGGAGCTGTTTGTGACTGTGTGAAGATCACTTaGCTAAAACTGCCCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: WTLLLHAFTLVPAGAVCDCVKIT*LKLPLW Trigger: CCACAGGGGCAGTTTTAGTCAAGTGATCTTCACACA...GTCACAAACAGCTCCAGCAGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TGGACACTCCTGCTTCATGCCTTCACTCTAGTTCCTGCTGGAGCTGTTTGTGACATGTCTAGTGAGAGCTaGGCTCTGATTGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: WTLLLHAFTLVPAGAVCDMSSES*ALIEGL Trigger: AAGGCCTTCAATCAGAGCTCAGCTCTCACTAGACAT...GTCACAAACAGCTCCAGCAGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGGATTAACATTTAATACTGACACCTCTACATaGAGGATCCCAAGAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LSLGLLFPTSLTRGLTFNTDTST*RIPREF Trigger: GAACTCTCTTGGGATCCTTCATGTAGAGGTGTCAGT...ATTAAATGTTAATCCCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGGTGCTGAACAAGGGCTaGGCTCCTTTTGAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RSSSHSPLQIELPLSTFMVLNKG*APFEGF Trigger: AAAACCTTCAAAAGGAGCTCAGCCCTTGTTCAGCAC...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | ACTTATTTTTACAACTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGTGCTTTTGTGCTCACTaGCACCTCTACATGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TYFYNSLLGFCSLPASPGCFCAH*HLYMKD Trigger: ATCCTTCATGTAGAGGTGTCAGTGAGCACAAAAGCA...CCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAAATAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGAATGGGTAATCAGCTCTaGGCTCTGCTTGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLDEDSHQSALHPTLHFRMGNQL*ALLESF Trigger: AAAGCTTTCAAGCAGAGCTCAGAGCTGATTACCCAT...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | GGGGAACTGACCCATTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCAGATAGCAAAACTTCCTaGATTGCTGGCGAAATAATT | + |
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Preference number: 4 (lower is better) Translates to: GELTHFWMRTLTNPLFIPDSKTS*IAGEII Trigger: AATTATTTCGCCAGCAATTCAGGAAGTTTTGCTATC...TGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAATGGGTCAGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TTTCTGGATGAGGACTCTCACCAATCCGCTCTTCATCCCACTCTCCACTTCAGATTTGGACCATGTTGTTaGACCCATATCTTCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FLDEDSHQSALHPTLHFRFGPCC*THIFSS Trigger: AGAGCTGAAGATATGGGTTCAACAACATGGTCCAAA...TCTGAAGTGGAGAGTGGGATGAAGAGCGGATTGGTGAGAGTCCTCATCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CCA 90 bp | TGGACACTCCTGCTTCATGCCTTCACTCTAGTTCCTGCTGGAGCTGTTTGTGACAATTCTTGGCAAGATTaGGCACTCCCATTCTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: WTLLLHAFTLVPAGAVCDNSWQD*ALPFCL Trigger: TAAACAGAATGGGAGTGCCCAATCTTGCCAAGAATT...GTCACAAACAGCTCCAGCAGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TGGACACTCCTGCTTCATGCCTTCACTCTAGTTCCTGCTGGAGCTGTTTGTGACATGTCTAATAAGCTTTaGGCTCTGGCTAAAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: WTLLLHAFTLVPAGAVCDMSNKL*ALAKGF Trigger: AAAACCTTTAGCCAGAGCTCAAAGCTTATTAGACAT...GTCACAAACAGCTCCAGCAGGAACTAGAGTGAAGGCATGAAGCAGGAGTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR GCA 90 bp | ACTTATTTTTACAACTCTCTCTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGCAAAACTTCCTGAATTaGTGGCGAAATAATTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TYFYNSLLGFCSLPASPGQNFLN*WRNNSW Trigger: CCAAGAATTATTTCGCCAGCAATTCAGGAAGTTTTG...CCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAGAGAGAGTTGTAAAAATAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CAA 72 bp | CTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGGGCTaGTCTTTAGATCAACAAATCATCAATGAAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: LASNSEICLPLG*SLDQQIINENV Trigger: AACATTTTCATTGATGATTTGTTGATCTAAAGACAAGCCCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | CTTGGGCTTCTGTTCCCTACCAGCCTCACCCGGGGATTAACATTTAATGAAAAAATGTCTTATGAGGTTTaGATTCAGACTGAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGLLFPTSLTRGLTFNEKMSYEV*IQTEGF Trigger: AAAGCCTTCAGTCTGAATTCAAACCTCATAAGACAT...TTTTTCATTAAATGTTAATCCCCGGGTGAGGCTGGTAGGGAACAGAAGCCCAAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CCA 90 bp | GATGTGATGCCAATTCTGAACTCAGTAGGCAATGTTCCATGTTTTGTTCCTTCCTTCCTCACCACTTTTTaGACCATGTTGTTGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: DVMPILNSVGNVPCFVPSFLTTF*TMLLNP Trigger: TGGGTTCAACAACATGGTCCAAAAAGTGGTGAGGAA...GGAAGGAACAAAACATGGAACATTGCCTACTGAGTTCAGAATTGGCATCACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CAA 72 bp | TTAACGCCAACCATACTGTCTCACAAACCTGGTACATaGACAGTCAGATGTAGTGACAGAATGAAGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LTPTILSHKPGT*TVRCSDRMKPF Trigger: AAAAGGCTTCATTCTGTCACTACATCTGACTGTCAATGTACCAGGTTTGTGAGACAGTATGGTTGGCGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR GCA 90 bp | GATGTGATGCCAATTCTGAACTCAGTAGGCAATGTTCCATGTTTTGTTCCTTCCGGGGAACTTCTTTGCTaGCATTCTAAATTGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DVMPILNSVGNVPCFVPSGELLC*HSKLLL Trigger: CAAAAGCAATTTAGAATGGCAGCAAAGAAGTTCCCC...GGAAGGAACAAAACATGGAACATTGCCTACTGAGTTCAGAATTGGCATCACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CCA 90 bp | GATGTGATGCCAATTCTGAACTCAGTAGGCAATGTTCCATGTTTTGTTCCTTCCAACTTCCTGAATTGCTaGCGAAATAATTCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DVMPILNSVGNVPCFVPSNFLNC*RNNSWQ Trigger: TTGCCAAGAATTATTTCGCCAGCAATTCAGGAAGTT...GGAAGGAACAAAACATGGAACATTGCCTACTGAGTTCAGAATTGGCATCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR TCA 90 bp | TTAGGTCTGCAGATGATAAGCCACTTAAGGGAAATACAGAGTCAATCCTTCAGAGTCCTCTTTTGCTGTTaGTTCATTATTCTTAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LGLQMISHLREIQSQSFRVLFCC*FIILSI Trigger: GATGCTAAGAATAATGAATCAACAGCAAAAGAGGAC...TCTGAAGGATTGACTCTGTATTTCCCTTAAGTGGCTTATCATCTGCAGACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CAA 72 bp | CTCACCCGGGGATTAACATTTAATGAAAAAGATTCATaGTGCTCCCTGAATAGGGTTCTGATTTCAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: LTRGLTFNEKDS*CSLNRVLISNS Trigger: AGAATTTGAAATCAGAACCCTATTCAGGGAGCACAATGAATCTTTTTCATTAAATGTTAATCCCCGGGTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR GCA 90 bp | ATAACTTGTATATGCCTGTTGAATTCATGGAAAAGCACTAATGACCACAGCTATACAGGGGAACTTCTTTaGTGCCATTCTAAATTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ITCICLLNSWKSTNDHSYTGELL*CHSKLL Trigger: AAGCAATTTAGAATGGCAGCAAAGAAGTTCCCCTGT...ATAGCTGTGGTCATTAGTGCTTTTCCATGAATTCAACAGGCATATACAAGTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| 3UTR CAA 72 bp | CATGAGAATATAGTCAAGATAACTTGTATATGCCTGTaGAATTCATGGAAAAGCACTAATGACCACAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: HENIVKITCICL*NSWKSTNDHSY Trigger: ATAGCTGTGGTCATTAGTGCTTTTCCATGAATTCAACAGGCATATACAAGTTATCTTGACTATATTCTCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CAA 90 bp | CGCTCTTCATCCCACTCTCCACTTCAGATAGAACTGCCATTGAGCACCTTCATGGTGTGTGAAGATCACTaGACTAAAACTGCCCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RSSSHSPLQIELPLSTFMVCEDH*TKTAPV Trigger: CACAGGGGCAGTTTTAGTCAAGTGATCTTCACACAC...CATGAAGGTGCTCAATGGCAGTTCTATCTGAAGTGGAGAGTGGGATGAAGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS GCA 90 bp | CTGTGGACAGGGGAACTTCTTTGCTGCCATTCTAAATTGCTTTTGTaGTCACTGACACCTCTACATGAAGGATCCCAAGAGAGTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LWTGELLCCHSKLLL*SLTPLHEGSQESSG Trigger: ACCAGAACTCTCTTGGGATCCTTCATGTAGAGGTGTCAGTGAGCACAAAAGCAATTTAGAATGGCAGCAAAGAAGTTCCCCTGTCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS TCA 90 bp | CAGGGGAACTTCTTTGCTGCCATTCTAAATTGCTTTTGTGCTCACTaGCACCTCTACATGAAGGATCCCAAGAGAGTTCTGGTGCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: QGNFFAAILNCFCAH*HLYMKDPKRVLVLF Trigger: AAAAAGCACCAGAACTCTCTTGGGATCCTTCATGTAGAGGTGTCAGTGAGCACAAAAGCAATTTAGAATGGCAGCAAAGAAGTTCCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS TCA 90 bp | TCTTCAAAGGCCGGACTTGGATGCTGGTTGAATCTTGGGATGTTTTaGGATATGTCAAATCTTTCCATGACACTGACGGTCCTTGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SSKAGLGCWLNLGMF*DMSNLSMTLTVLVD Trigger: ATCTACAAGGACCGTCAGTGTCATGGAAAGATTTGACATATCTCAAAACATCCCAAGATTCAACCAGCATCCAAGTCCGGCCTTTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CAA 90 bp | GATGTGATGCCAATTCTGAACTCAGTAGGCAATGTTCCATGTTTTGTTCCTTCCTGCTGCCATTCTAAATaGCTTTTGTGCTCACTGACA | + |
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Preference number: 5 (lower is better) Translates to: DVMPILNSVGNVPCFVPSCCHSK*LLCSLT Trigger: TGTCAGTGAGCACAAAAGCAATTTAGAATGGCAGCA...GGAAGGAACAAAACATGGAACATTGCCTACTGAGTTCAGAATTGGCATCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CAA 90 bp | TTGTGCTCCCTGAATAGGGTTCTGATTTCAAATTCTGACTTTGTAGCTATAAGTCCTGAGGTTTTAAAGTaGAAATTGCTCTGGATTCCA | + |
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Preference number: 5 (lower is better) Translates to: LCSLNRVLISNSDFVAISPEVLK*KLLWIP Trigger: TGGAATCCAGAGCAATTTCAACTTTAAAACCTCAGG...ACTTATAGCTACAAAGTCAGAATTTGAAATCAGAACCCTATTCAGGGAGCACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS-3UTR CAA 90 bp | ATAACTTGTATATGCCTGTTGAATTCATGGAAAAGCACTAATGACCACAGCTATGTTTTAAAGTTGAAATaGCTCTGGATTCCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ITCICLLNSWKSTNDHSYVLKLK*LWIPQP Trigger: TGGCTGTGGAATCCAGAGCAATTTCAACTTTAAAAC...ATAGCTGTGGTCATTAGTGCTTTTCCATGAATTCAACAGGCATATACAAGTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS TCA 72 bp | GCCGGACTTGGATGCTGGTTGAATCTTGGGATGTTTTaGGATATGTCAAATCTTTCCATGACACTGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGLGCWLNLGMF*DMSNLSMTLTV Trigger: GACCGTCAGTGTCATGGAAAGATTTGACATATCTCAAAACATCCCAAGATTCAACCAGCATCCAAGTCCGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS CAA 90 bp | GTCTTCAAAGGCCGGACTTGGATGCTGGTTGAATCTTGGGATGTTTaGAGATATGTCAAATCTTTCCATGACACTGACGGTCCTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: VFKGRTWMLVESWDV*RYVKSFHDTDGPCR Trigger: TCTACAAGGACCGTCAGTGTCATGGAAAGATTTGACATATCTCAAAACATCCCAAGATTCAACCAGCATCCAAGTCCGGCCTTTGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS TCA 72 bp | CAGCTGTGTCTTCAAAGGCCGGACTTGGATGCTGGTTaGATCTTGGGATGTTTTGAGATATGTCAAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: QLCLQRPDLDAG*ILGCFEICQIF Trigger: AAAGATTTGACATATCTCAAAACATCCCAAGATTCAACCAGCATCCAAGTCCGGCCTTTGAAGACACAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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| CDS TCA 72 bp | CATGTTACAGAGTTTGTACTTATAATCAAGCATCTTTaGGATTCATCAAGATGGTCTCTCTTTGCTAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HVTEFVLIIKHL*DSSRWSLFAKD Trigger: ATCCTTAGCAAAGAGAGACCATCTTGATGAATCTCAAAGATGCTTGATTATAAGTACAAACTCTGTAACATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060762.6 |
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