Pregenerated sensors for ZFP395 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034522Ensembl transcript IDs: ENSMUST00000066994.7, ENSMUST00000224623.2, ENSMUST00000224687.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGGGCCAGGGAGCAGGGAGATAGAGATGACGACGAAGCGGGCCTaGCGGCTGGGTGGGGGTGGTTCACAGCCACCCTTGCCCTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: SGPGSREIEMTTKRA*RLGGGGSQPPLPFK Trigger: TTTGAAGGGCAAGGGTGGCTGTGAACCACCCCCACCCAGCCGTCAGGCCCGCTTCGTCGTCATCTCTATCTCCCTGCTCCCTGGCCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 90 bp | GGAGCCTCCGTGGTCAGGAGGGAGCTCCCCATGACAATGAGCCAATaGTGCTCAGTCCCTGGAGAGGTGACCTGGTGCCACTCCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: GASVVRRELPMTMSQ*CSVPGEVTWCHSLS Trigger: GCTCAGGGAGTGGCACCAGGTCACCTCTCCAGGGACTGAGCATCATTGGCTCATTGTCATGGGGAGCTCCCTCCTGACCACGGAGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 90 bp | CGAAGCGGGCCTGACGGCTGGGTGGGGGTGGTTCACAGCCACCCTTaGCCTTCAAACCCAAAGCCAGACCATGTGTCAGGAACCAACATG | + |
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Preference number: 1 (lower is better) Translates to: RSGPDGWVGVVHSHP*PSNPKPDHVSGTNM Trigger: CATGTTGGTTCCTGACACATGGTCTGGCTTTGGGTTTGAAGGGCAAGGGTGGCTGTGAACCACCCCCACCCAGCCGTCAGGCCCGCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 90 bp | TGCTCAGTCCCTGGAGAGGTGACCTGGTGCCACTCCCTGAGCCTGTaGCACCTGGGATGTCAGTCCAGAACAGTGGGGTCCTGGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: CSVPGEVTWCHSLSL*HLGCQSRTVGSWKS Trigger: TGACTTCCAGGACCCCACTGTTCTGGACTGACATCCCAGGTGTCACAGGCTCAGGGAGTGGCACCAGGTCACCTCTCCAGGGACTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 90 bp | CCTTATGGATCCAACCCTGGGTTCCCGGGAGAACCCATCTGCACCTaGGACTTCAGTGGCCACAGACAGTATCCCTGGACTTGCAGCACG | + |
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Preference number: 1 (lower is better) Translates to: PYGSNPGFPGEPICT*DFSGHRQYPWTCST Trigger: CGTGCTGCAAGTCCAGGGATACTGTCTGTGGCCACTGAAGTCTCAGGTGCAGATGGGTTCTCCCGGGAACCCAGGGTTGGATCCATAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 90 bp | TTCTCTCTCCCTTTTCTGTCTGGTGCGCCAATGGCATGGGAACCATaGTGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: FSLPFLSGAPMAWEP*CKWRKLYSVTSASS Trigger: GGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCATGCCATTGGCGCACCAGACAGAAAAGGGAGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 90 bp | CCTTTTCTGTCTGGTGCGCCAATGGCATGGGAACCATGCTGCAAATaGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: PFLSGAPMAWEPCCK*RKLYSVTSASSKPR Trigger: CCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCATGCCATTGGCGCACCAGACAGAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 90 bp | AAGAAGGCTTCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTaGCATTCTAGTGTCTCTGTGACACTCTGGAGGGAAGGGGACTTT | + |
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Preference number: 1 (lower is better) Translates to: KKASSSKTSTSDKST*HSSVSVTLWREGDF Trigger: AAAGTCCCCTTCCCTCCAGAGTGTCACAGAGACACTAGAATGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGAAGCCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 90 bp | TCTCTCCCTTTTCTGTCTGGTGCGCCAATGGCATGGGAACCATGCTaGAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAA | + |
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Preference number: 1 (lower is better) Translates to: SLPFLSGAPMAWEPC*KWRKLYSVTSASSK Trigger: TTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCATGCCATTGGCGCACCAGACAGAAAAGGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 90 bp | ATGGGAACCATGCTGCAAATGGAGGAAATTATATTCAGTTACGTCTaGAAGCTCCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: MGTMLQMEEIIFSYV*KLQTKAGMKTPLLK Trigger: CTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGCTACACACTCACTCCGACAAGGCAGCCATTGCTCGCAGTACTGTCTCTCCCTGTGTTCTGCTaGTGGCTGCAGGCCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSSYTLTPTRQPLLAVLSLPVFC*WLQAWR Trigger: CCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAG...AGACAGTACTGCGAGCAATGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR GCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCATGTTCTGCTGATGGCTaGAGGCCTGGAGGCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPCSADG*RPGGFP Trigger: CGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACA...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GACAATGAGCCAATGATGCTCAGTCCCTGGAGAGGTGACCTGGTGCCACTCCCTTCCTGCCACATTCCCTaGGTGGCCATCTACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: DNEPMMLSPWRGDLVPLPSCHIP*VAIYLP Trigger: TGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGA...AGGGAGTGGCACCAGGTCACCTCTCCAGGGACTGAGCATCATTGGCTCATTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAGGTGCGCCAATGGCATaGGAACCATGCTGCAAATGG | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPGAPMA*EPCCKW Trigger: CCATTTGCAGCATGGTTCCCATGCCATTGGCGCACC...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAGTAGGGGTAACTCTTTaGTCTCCGGTTCGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPVGVTL*SPVRCR Trigger: TCTGCAGCGAACCGGAGACCAAAGAGTTACCCCTAC...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GACAATGAGCCAATGATGCTCAGTCCCTGGAGAGGTGACCTGGTGCCACTCCCTGTCTCTGTGACACTCTaGAGGGAAGGGGACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: DNEPMMLSPWRGDLVPLPVSVTL*REGDFT Trigger: AGTAAAGTCCCCTTCCCTCCAGAGTGTCACAGAGAC...AGGGAGTGGCACCAGGTCACCTCTCCAGGGACTGAGCATCATTGGCTCATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR TCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAATGACAATGAGCCAATaGTGCTCAGTCCCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPMTMSQ*CSVPGE Trigger: CTCTCCAGGGACTGAGCATCATTGGCTCATTGTCAT...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGATGTGGCACCACCAGTaGAGCCTCCGTGGTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWMWHHQ*SLRGQE Trigger: CTCCTGACCACGGAGGCTCCACTGGTGGTGCCACAT...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACACTCCCTGAGCCTGTaGCACCTGGGATGTCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PNQGWDENTFAEVDTQSIHSLSL*HLGCQS Trigger: GGACTGACATCCCAGGTGTCACAGGCTCAGGGAGTG...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | AGGATCTTCCAGAGACCCCAAGGGAAAGAAGGCTTCCTCATCAAAGACTTCTACCCAGAGAGGGTGGAATaGGGTAGGGGTAGGGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: RIFQRPQGKEGFLIKDFYPERVE*GRGRGN Trigger: GTTACCCCTACCCCTACCCCATTCCACCCTCTCTGG...GTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCCTTGGGGTCTCTGGAAGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCACGAGTAATGGAAACGTaGCTGGACAGTTTCCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPRVMET*LDSFPR Trigger: TCTTGGGAAACTGTCCAGCCACGTTTCCATTACTCG...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR GCA 90 bp | TACTTAGTGTGCCTTAGACTGAGAAGTAGATGTTTCCCATGTGGCACCACCAGTCTCAACAAGCACAGCTaGCTGCTCTTCTTAGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: YLVCLRLRSRCFPCGTTSLNKHS*LLFLGS Trigger: GGACCCTAAGAAGAGCAGGCAGCTGTGCTTGTTGAG...ACTGGTGGTGCCACATGGGAAACATCTACTTCTCAGTCTAAGGCACACTAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAAGCGCCGATAAGACAAATTCACAGATGAGATTCTCCCTTTTTGTGGTTCCCTTTTCTGTCTGGTaGGCCAATGGCATGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: GRSADKTNSQMRFSLFVVPFSVW*ANGMGT Trigger: GGTTCCCATGCCATTGGCGCACCAGACAGAAAAGGG...AACCACAAAAAGGGAGAATCTCATCTGTGAATTTGTCTTATCGGCGCTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAGAGGCCGCACAGAGATaGAATAAAGAACTAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: ATDSIPGLAARSECSANPEAAQR*NKELNK Trigger: TTTGTTTAGTTCTTTATTCCATCTCTGTGCGGCCTC...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGCGCCGATAAGACAAATTCACAGATGAGATTCTCCCTTTTTGTGGTTTCTCCCTTTTCTGTCTaGTGCGCCAATGGCATGGGA | + |
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Preference number: 2 (lower is better) Translates to: GRSADKTNSQMRFSLFVVSPFSV*CANGMG Trigger: TCCCATGCCATTGGCGCACCAGACAGAAAAGGGAGA...AACCACAAAAAGGGAGAATCTCATCTGTGAATTTGTCTTATCGGCGCTTCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATAGCTGCAGAATACCCTTaGTCAATTTTGGCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PNQGWDENTFAEVDTQSIAAEYP*SILALS Trigger: GGAGAGAGCCAAAATTGACCAAGGGTATTCTGCAGC...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGAGAGAGAAGTTCATTTaGTCACAGGCCACTCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWREKFI*SQATLE Trigger: TTCTAGAGTGGCCTGTGAGCAAATGAACTTCTCTCT...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGAAGACACCTAGATACTaGTGCTTCCCCTCCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: CKWRKLYSVTSASSKPRLKTPRY*CFPSIS Trigger: GCTGATGGAGGGGAAGCACCAGTATCTAGGTGTCTT...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGCGCCGATAAGACAAATTCACAGATGAGATTCTCCCTTTTTGTGGTTACACCTTTGCTGAAGTaGACACTCAGTCTATACTGG | + |
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Preference number: 2 (lower is better) Translates to: GRSADKTNSQMRFSLFVVTPLLK*TLSLYW Trigger: CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGT...AACCACAAAAAGGGAGAATCTCATCTGTGAATTTGTCTTATCGGCGCTTCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CAA 90 bp | GAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTTCATTaGCTCACAGGCCACTCTAGAATAGCTGAAAGAGCAAAGGATTCA | + |
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Preference number: 2 (lower is better) Translates to: ERKKEREREREREVH*LTGHSRIAERAKDS Trigger: TGAATCCTTTGCTCTTTCAGCTATTCTAGAGTGGCCTGTGAGCAAATGAACTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAGAAGGCTTCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTGACATTTGAAGACAGGCTTTaGGAAGAAGCCACATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GKEGFLIKDFYIRQEHLTFEDRL*EEATCL Trigger: TAAACATGTGGCTTCTTCTCAAAGCCTGTCTTCAAA...TGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 72 bp | CCACGCCACATCATCTCCCTGTGTTCTGCTGATGGCTaGAGGCCTGGAGGCTTCCCGGCTGCCAGGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PRHIISLCSADG*RPGGFPAARQG Trigger: ACCCTGCCTGGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGATGTGGCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | GATGACGACGAAGCGGGCCTGACGGCTGGGTGGGGGTaGTTCACAGCCACCCTTGCCCTTCAAACCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: DDDEAGLTAGWG*FTATLALQTQS Trigger: GCTTTGGGTTTGAAGGGCAAGGGTGGCTGTGAACCACCCCCACCCAGCCGTCAGGCCCGCTTCGTCGTCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 72 bp | CCTGGAGAGGTGACCTGGTGCCACTCCCTGAGCCTGTaGCACCTGGGATGTCAGTCCAGAACAGTGGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: PGEVTWCHSLSL*HLGCQSRTVGS Trigger: GGACCCCACTGTTCTGGACTGACATCCCAGGTGTCACAGGCTCAGGGAGTGGCACCAGGTCACCTCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | GATAGAGATGACGACGAAGCGGGCCTGACGGCTGGGTaGGGGTGGTTCACAGCCACCCTTGCCCTTCAAACC | + |
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Preference number: 3 (lower is better) Translates to: DRDDDEAGLTAG*GWFTATLALQT Trigger: GGTTTGAAGGGCAAGGGTGGCTGTGAACCACCCCCACCCAGCCGTCAGGCCCGCTTCGTCGTCATCTCTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 72 bp | GTGGTCAGGAGGGAGCTCCCCATGACAATGAGCCAATaGTGCTCAGTCCCTGGAGAGGTGACCTGGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: VVRRELPMTMSQ*CSVPGEVTWCH Trigger: GTGGCACCAGGTCACCTCTCCAGGGACTGAGCATCATTGGCTCATTGTCATGGGGAGCTCCCTCCTGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | GTTCCCGGGAGAACCCATCTGCACCTGAGACTTCAGTaGCCACAGACAGTATCCCTGGACTTGCAGCACGGA | + |
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Preference number: 3 (lower is better) Translates to: VPGRTHLHLRLQ*PQTVSLDLQHG Trigger: TCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGCCACTGAAGTCTCAGGTGCAGATGGGTTCTCCCGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 72 bp | CTCAACAAGCACAGCTGCCTGCTCTTCTTAGGGTCCTaGCACATTCCCTGGGTGGCCATCTACCTGCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LNKHSCLLFLGS*HIPWVAIYLPE Trigger: TTCTGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGACCCTAAGAAGAGCAGGCAGCTGTGCTTGTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR TCA 72 bp | TGTCAGTCCAGAACAGTGGGGTCCTGGAAGTCATGCTaGGCAGGCCCACAGGCAAAGTCTGCTAGGATCTTC | + |
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Preference number: 3 (lower is better) Translates to: CQSRTVGSWKSC*AGPQAKSARIF Trigger: GAAGATCCTAGCAGACTTTGCCTGTGGGCCTGCTCAGCATGACTTCCAGGACCCCACTGTTCTGGACTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | CGGCAACACTGCTTTCAGGGCCAGATTAAAGCCTTATaGATCCAACCCTGGGTTCCCGGGAGAACCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: RQHCFQGQIKAL*IQPWVPGRTHL Trigger: CAGATGGGTTCTCCCGGGAACCCAGGGTTGGATCCATAAGGCTTTAATCTGGCCCTGAAAGCAGTGTTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 72 bp | TGTCCAGCTACACACTCACTCCGACAAGGCAGCCATTaGTCGCAGTACTGTCTGAAGCGGCAACACTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: CPATHSLRQGSH*SQYCLKRQHCF Trigger: AAAGCAGTGTTGCCGCTTCAGACAGTACTGCGAGCAATGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | GGGAAGGGGACTTTACTCAGTAGGAGCAGAGTTGGATaGAGACTCTCCACACTTCCTCTCAGAGTTGACGGG | + |
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Preference number: 3 (lower is better) Translates to: GKGTLLSRSRVG*RLSTLPLRVDG Trigger: CCCGTCAACTCTGAGAGGAAGTGTGGAGAGTCTCCATCCAACTCTGCTCCTACTGAGTAAAGTCCCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR GCA 72 bp | GTCCCTTTTCTGTCCTCATATCTCAACAAGCACAGCTaGCTGCTCTTCTTAGGGTCCTGCCACATTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VPFLSSYLNKHS*LLFLGSCHIPW Trigger: CCAGGGAATGTGGCAGGACCCTAAGAAGAGCAGGCAGCTGTGCTTGTTGAGATATGAGGACAGAAAAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | ACTCTTGATGCATATGTAGTCCCAGAGAGGGTGGAATaGGGTAGGGGTAGGGGTAACTCTTTGGTCTCCGGT | + |
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Preference number: 3 (lower is better) Translates to: TLDAYVVPERVE*GRGRGNSLVSG Trigger: ACCGGAGACCAAAGAGTTACCCCTACCCCTACCCCATTCCACCCTCTCTGGGACTACATATGCATCAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | AGCTGCCTGCTCTTCTTAGGGTCCTGCCACATTCCCTaGGTGGCCATCTACCTGCCAGAAAGTTCTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SCLLFLGSCHIP*VAIYLPESSSF Trigger: AAAAGAAGAACTTTCTGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGACCCTAAGAAGAGCAGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR CCA 72 bp | TTTCAGGGCCAGATTAAAGCCTTATGGATCCAACCCTaGGTTCCCGGGAGAACCCATCTGCACCTGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: FQGQIKALWIQP*VPGRTHLHLRL Trigger: AAGTCTCAGGTGCAGATGGGTTCTCCCGGGAACCCAGGGTTGGATCCATAAGGCTTTAATCTGGCCCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CAA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAGGGATGAAAACACCTTaGCTGAAGTGGACACTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ATDSIPGLAARSECSANPGMKTP*LKWTLS Trigger: ACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCC...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| 3UTR-3UTR CAA 90 bp | TTCATAGGGTCCTCTAAGGTGTCCAGCTACACACTCACTCCGACAAGGCAGCCAGAGAGAGAAGTTCATTaGCTCACAGGCCACTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FIGSSKVSSYTLTPTRQPEREVH*LTGHSR Trigger: TCTAGAGTGGCCTGTGAGCAAATGAACTTCTCTCTC...TGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACACCTTAGAGGACCCTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAAAGAGCAAAGGATTCACCAGCTCAGAACAAAACCAGGCAAGGCAGCATCCGCTGCAGAATACCCTaGGTCAATTTTGGCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AERAKDSPAQNKTRQGSIRCRIP*VNFGSL Trigger: GAGAGAGCCAAAATTGACCAAGGGTATTCTGCAGCG...GATGCTGCCTTGCCTGGTTTTGTTCTGAGCTGGTGAATCCTTTGCTCTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR CCA 72 bp | TTGAAGACAGGCTTTGAGAAGAAGCCACATGTTTATTaGCATGCAACCCAACATCTGGGGGAAACCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: LKTGFEKKPHVY*HATQHLGETQI Trigger: GATCTGGGTTTCCCCCAGATGTTGGGTTGCATGCCAATAAACATGTGGCTTCTTCTCAAAGCCTGTCTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCTTCCAGAGACCCCAAGGGAAAGAAGGCTTCCTCATCAAAGACTTCTACTTTGCCTCAGCTTTTTaGAAGACAGGCTTTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RIFQRPQGKEGFLIKDFYFASAF*KTGFEK Trigger: CTTCTCAAAGCCTGTCTTCAAAAAAGCTGAGGCAAA...GTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCCTTGGGGTCTCTGGAAGATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR TCA 72 bp | TCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTaGCATTCTAGTGTCTCTGTGACACTCTGGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSKTSTSDKST*HSSVSVTLWRE Trigger: TTCCCTCCAGAGTGTCACAGAGACACTAGAATGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR GCA 72 bp | TTTCTGTCTGGTGCGCCAATGGCATGGGAACCATGCTaGAAATGGAGGAAATTATATTCAGTTACGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLSGAPMAWEPC*KWRKLYSVTSA Trigger: TGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCATGCCATTGGCGCACCAGACAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR GCA 72 bp | CCTTTTCTGTCTGGTGCGCCAATGGCATGGGAACCATaGTGCAAATGGAGGAAATTATATTCAGTTACGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PFLSGAPMAWEP*CKWRKLYSVTS Trigger: AGACGTAACTGAATATAATTTCCTCCATTTGCAGCATGGTTCCCATGCCATTGGCGCACCAGACAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAAGCGCCGATAAGACAAATTCACAGATGAGATTCTCCCTTTTTGTGGTTGAAGCCACATGTTTATaGGCATGCAACCCAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: GRSADKTNSQMRFSLFVVEATCL*ACNPTS Trigger: AGATGTTGGGTTGCATGCCAATAAACATGTGGCTTC...AACCACAAAAAGGGAGAATCTCATCTGTGAATTTGTCTTATCGGCGCTTCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATATACCCTTGGTCAATTTaGGCTCTCTCCTATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PNQGWDENTFAEVDTQSIYPWSI*ALSYFK Trigger: CTTAAAATAGGAGAGAGCCAAAATTGACCAAGGGTA...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR GCA 72 bp | ATGCTGCAAATGGAGGAAATTATATTCAGTTACGTCTaGAAGCTCCAAACCAAGGCTGGGATGAAAACACCT | + |
|
Preference number: 3 (lower is better) Translates to: MLQMEEIIFSYV*KLQTKAGMKTP Trigger: AGGTGTTTTCATCCCAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCTTCCTGGTGCTGCTCTaGGCACGGGGTGGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IISLCSADGCRPGGFPAAFLVLL*ARGGEV Trigger: CACCTCCCCACCCCGTGCTCAGAGCAGCACCAGGAA...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCACCAGGTACTTGGGGCTaGCCTGCGGATGGGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATDSIPGLAARSECSANPPGTWG*PADGAA Trigger: CGCCGCCCCATCCGCAGGCCAGCCCCAAGTACCTGG...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCCTTGGCTGGAGGCAATaGAAGAGCAGCAAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: IISLCSADGCRPGGFPAALGWRQ*KSSKGR Trigger: CCGTCCCTTGCTGCTCTTTCATTGCCTCCAGCCAAG...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCCCAGCTGCCCACATCCACGCCACATCATCTCCCTGTGTTCTGCTGATCACGGGCTTTCCTGGTaGTGCTCTGAGCACGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WSPSCPHPRHIISLCSADHGLSW*CSEHGV Trigger: CACCCCGTGCTCAGAGCAGCACCAGGAAAGCCCGTG...ATCAGCAGAACACAGGGAGATGATGTGGCGTGGATGTGGGCAGCTGGGGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCGTCCTTAGAGGTGAGTaGGGACAGGGACATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IISLCSADGCRPGGFPAAVLRGE*GQGHGS Trigger: GGAGCCATGTCCCTGTCCCCACTCACCTCTAAGGAC...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCTTAGGGTCCTGCCACATTCCCTGGGTGGCCATCTACCTGCCAGAAAGCATCCCCCAGGTACTTaGGGCTGGCCTGCGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLRVLPHSLGGHLPARKHPPGT*GWPADG Trigger: CCCATCCGCAGGCCAGCCCCAAGTACCTGGGGGATG...CTTTCTGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGACCCTAAGAAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GTGTCCAGCTACACACTCACTCCGACAAGGCAGCCATTGCTCGCAGTACTGTCTACGGGCTGGTCACCCTaGAGGTGGACGCTGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSYTLTPTRQPLLAVLSTGWSP*RWTLAR Trigger: GCGAGCCAGCGTCCACCTCCAGGGTGACCAGCCCGT...AGACAGTACTGCGAGCAATGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCTTAGGGTCCTGCCACATTCCCTGGGTGGCCATCTACCTGCCAGAAAGAGGAGCTCCTTGGGCTaGTCCTGGCACACAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLRVLPHSLGGHLPARKRSSLG*SWHTGS Trigger: GGACCCTGTGTGCCAGGAGCAGCCCAAGGAGCTCCT...CTTTCTGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGACCCTAAGAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | GCTCTTCTTAGGGTCCTGCCACATTCCCTGGGTGGCCATCTACCTGCCAGAAAGACTGTAGGTGGCGGCTaGTGGGGCTCGCTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLRVLPHSLGGHLPARKTVGGG*WGSLKL Trigger: CAGCTTCAGCGAGCCCCAGCAGCCGCCACCTACAGT...CTTTCTGGCAGGTAGATGGCCACCCAGGGAATGTGGCAGGACCCTAAGAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAGAGCAAAGGATTCACCAGCTCAGAACAAAACCAGGCAAGGCAGCATCGGGCTGGCCTGCGGATaGGGCGGCGAGGGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AERAKDSPAQNKTRQGSIGLACG*GGEGVE Trigger: CTCTACCCCCTCGCCGCCCCATCCGCAGGCCAGCCC...GATGCTGCCTTGCCTGGTTTTGTTCTGAGCTGGTGAATCCTTTGCTCTTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GTGTCCAGCTACACACTCACTCCGACAAGGCAGCCATTGCTCGCAGTACTGTCTCGGCACTTCTATCTGTaGCTCCAGAGGCAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSYTLTPTRQPLLAVLSRHFYL*LQRQGG Trigger: GCCACCCTGCCTCTGGAGCCACAGATAGAAGTGCCG...AGACAGTACTGCGAGCAATGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | TTCATAGGGTCCTCTAAGGTGTCCAGCTACACACTCACTCCGACAAGGCAGCCAGCCCCAGGAGGACTCTaGACAACGGGACTGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FIGSSKVSSYTLTPTRQPAPGGL*TTGLQD Trigger: GTCTTGCAGTCCCGTTGTGCAGAGTCCTCCTGGGGC...TGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACACCTTAGAGGACCCTATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATATACTTGGGGCTGGCCTaGGGATGGGGCGGCGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PNQGWDENTFAEVDTQSIYLGLA*GWGGEG Trigger: CCCCTCGCCGCCCCATCCGCAGGCCAGCCCCAAGTA...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GCCACAGACAGTATCCCTGGACTTGCAGCACGGAGTGAGTGTAGTGCAAACCCAGAGACGTCAGCACCATaGCGGCCATCATCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATDSIPGLAARSECSANPETSAP*RPSSRP Trigger: TGGACGAGATGATGGCCGCCATGGTGCTGACGTCTC...TGGGTTTGCACTACACTCACTCCGTGCTGCAAGTCCAGGGATACTGTCTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCCAGCTGCCCACATCCACGCCACATCATCTCCCTGTGTTCTGCTGATGAACTTTGCCACAGCTaGGCCACAGGCACTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WSPSCPHPRHIISLCSADELCHS*ATGTCT Trigger: TGTACAAGTGCCTGTGGCCCAGCTGTGGCAAAGTTC...ATCAGCAGAACACAGGGAGATGATGTGGCGTGGATGTGGGCAGCTGGGGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCTTTGATGCCCACAATTaGACGGAGAACTTTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IISLCSADGCRPGGFPAAFDAHN*TENFAT Trigger: TGTGGCAAAGTTCTCCGTTCAATTGTGGGCATCAAA...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GAGCAAAGGATTCACCAGCTCAGAACAAAACCAGGCAAGGCAGCATCCTGTCCTGCTCCAGAGGCAGGGTaGCCCCTGATGGTACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQRIHQLRTKPGKAASCPAPEAG*PLMVLQ Trigger: CTGAAGTACCATCAGGGGCCACCCTGCCTCTGGAGC...AGGACAGGATGCTGCCTTGCCTGGTTTTGTTCTGAGCTGGTGAATCCTTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GAAGCCACATGTTTATTGGCATGCAACCCAACATCTGGGGGAAACCCAGATCCACTCCACGGGCTTTCCTaGTGCTGCTCTGAGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: EATCLLACNPTSGGNPDPLHGLS*CCSEHG Trigger: CCCGTGCTCAGAGCAGCACCAGGAAAGCCCGTGGAG...TGGATCTGGGTTTCCCCCAGATGTTGGGTTGCATGCCAATAAACATGTGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR CAA 72 bp | GTGTCCAGCTACACACTCACTCCGACAAGGCAGCCATaGCTCGCAGTACTGTCTGAAGCGGCAACACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSYTLTPTRQP*LAVLSEAATLL Trigger: AAGCAGTGTTGCCGCTTCAGACAGTACTGCGAGCAATGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGAGGCAGGGTGGCCCCTaGTGGTACTTCAGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWRQGGP*WYFSGT Trigger: AGTGCCGCTGAAGTACCATCAGGGGCCACCCTGCCT...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | TACTTAGTGTGCCTTAGACTGAGAAGTAGATGTTTCCCATGTGGCACCACCAGTGGGCTTTCCTGGTGCTaGTCTGAGCACGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLVCLRLRSRCFPCGTTSGLSWC*SEHGVG Trigger: CCCCACCCCGTGCTCAGAGCAGCACCAGGAAAGCCC...ACTGGTGGTGCCACATGGGAAACATCTACTTCTCAGTCTAAGGCACACTAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATATCCGGGCTCCAAGGCTaGCACGTGGGATGCGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PNQGWDENTFAEVDTQSISGLQG*HVGCAT Trigger: GGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGA...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGGTAGGTGGCGGCTGCTaGGGCTCGCTGAAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWVGGGC*GSLKLR Trigger: TCTCAGCTTCAGCGAGCCCCAGCAGCCGCCACCTAC...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGGGGCAGCAGCCCAGCTaGTGCTGGTATAGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWGQQPS*CWYRCG Trigger: CCCACATCTATACCAGCATCAGCTGGGCTGCTGCCC...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR CAA 72 bp | CTGGAGGGAAGGGGACTTTACTCAGTAGGAGCAGAGTaGGATGGAGACTCTCCACACTTCCTCTCAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEGRGLYSVGAE*DGDSPHFLSEL Trigger: CAACTCTGAGAGGAAGTGTGGAGAGTCTCCATCCAACTCTGCTCCTACTGAGTAAAGTCCCCTTCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | TTCATAGGGTCCTCTAAGGTGTCCAGCTACACACTCACTCCGACAAGGCAGCCATCAGTCTCAAAGCCATaGTCAGTTTGGGGAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIGSSKVSSYTLTPTRQPSVSKP*SVWGDP Trigger: TGGGTCTCCCCAAACTGATCATGGCTTTGAGACTGA...TGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACACCTTAGAGGACCCTATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | AGGATCTTCCAGAGACCCCAAGGGAAAGAAGGCTTCCTCATCAAAGACTTCTACCAGGAGCTGACTTGCTaGGTGCAACTGAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIFQRPQGKEGFLIKDFYQELTC*VQLRAE Trigger: CTCTGCCCTCAGTTGCACTCAGCAAGTCAGCTCCTG...GTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCCTTGGGGTCTCTGGAAGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGAAGGCTTCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTGACAGGTCCCGGTGCTCGATaGCGTACACCTTACGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKEGFLIKDFYIRQEHLTGPGAR*RTPYGT Trigger: AGTGCCGTAAGGTGTACGGCATCGAGCACCGGGACC...TGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | AGGATCTTCCAGAGACCCCAAGGGAAAGAAGGCTTCCTCATCAAAGACTTCTACCACCACTGGTCCCGGTaGTCGATGCCGTACACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RIFQRPQGKEGFLIKDFYHHWSR*SMPYTL Trigger: TAAGGTGTACGGCATCGAGCACCGGGACCAGTGGTG...GTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCCTTGGGGTCTCTGGAAGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAAGGCTTCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTGACAGCTCTGAGCACGGGGTaGGGAGGTGACAATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKEGFLIKDFYIRQEHLTALSTG*GGDNQV Trigger: CACCTGATTGTCACCTCCCCACCCCGTGCTCAGAGC...TGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAAGGCTTCCTCATCAAAGACTTCTACATCAGACAAGAGCACCTGACAGGGAAACAGAGAAGATaGGCTCAGCCCCAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKEGFLIKDFYIRQEHLTGKQRR*AQPQED Trigger: GTCCTCCTGGGGCTGAGCCCATCTTCTCTGTTTCCC...TGTCAGGTGCTCTTGTCTGATGTAGAAGTCTTTGATGAGGAAGCCTTCTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATAACAGTGTCCCCCAGGTaGAGGGCTTTGACGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PNQGWDENTFAEVDTQSITVSPR*RALTCR Trigger: ACGACACGTCAAAGCCCTCCACCTGGGGGACACTGT...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGGCTCCACCAGGCCCTTaGACTCCTGACCTCCATACC | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLAPPGP*TPDLHT Trigger: GGTATGGAGGTCAGGAGTGCAAGGGCCTGGTGGAGC...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGAAGGCCACCTGTGGGTaGCCTGAGGTTCCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLKATCG*PEVPRA Trigger: AGCTCTGGGAACCTCAGGCCACCCACAGGTGGCCTT...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGAGGTTCCCAGAGCTTTaGGGAGCTCCTTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLRFPEL*GAPWAA Trigger: AGCAGCCCAAGGAGCTCCTCAAAGCTCTGGGAACCT...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATACTGGTATGCATGGTCAGCCTaGATGTGCCAGAAAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAGMKTPLLKWTLSLYWYAWSA*MCQKEP Trigger: TGGCTCTTTCTGGCACATTCAGGCTGACCATGCATA...CCAGTATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR GCA 90 bp | GGGAGAAGCGCCGATAAGACAAATTCACAGATGAGATTCTCCCTTTTTGTGGTTTTGAACGGAGAACTTTaGCACAGCTGGGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSADKTNSQMRFSLFVVLNGEL*HSWATG Trigger: GCCTGTGGCCCAGCTGTGGCAAAGTTCTCCGTTCAA...AACCACAAAAAGGGAGAATCTCATCTGTGAATTTGTCTTATCGGCGCTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATAAGTCTTCCTCCCGCTTaGACTGATCAGAGTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PNQGWDENTFAEVDTQSISLPPA*TDQSQQ Trigger: CTGTTGACTCTGATCAGTTCAAGCGGGAGGAAGACT...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGCTTGCTGAGTGCAACTaGGGGCAGAGAAGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLLAECN*GQRRLQ Trigger: CTGGAGTCTTCTCTGCCCTCAGTTGCACTCAGCAAG...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | TACTTAGTGTGCCTTAGACTGAGAAGTAGATGTTTCCCATGTGGCACCACCAGTCAGATGACTGGACCTTaGCTGGAGGCAATGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLVCLRLRSRCFPCGTTSQMTGP*LEAMKE Trigger: CTCTTTCATTGCCTCCAGCCAAGGTCCAGTCATCTG...ACTGGTGGTGCCACATGGGAAACATCTACTTCTCAGTCTAAGGCACACTAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR TCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGTCCTCCCGCTTGAACTaGTCAGAGTCAACAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLSSRLN*SESTVS Trigger: GGACACTGTTGACTCTGATCAGTTCAAGCGGGAGGA...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CCA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGAGGGATCTGGAAGGATaGCAGAGCCTGATATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CKWRKLYSVTSASSKPRLRDLEG*QSLICM Trigger: CATGCATATCAGGCTCTGCCATCCTTCCAGATCCCT...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| 3UTR CAA 72 bp | AAAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTTCATTaGCTCACAGGCCACTCTAGAATAGCTGAAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KEREREREREVH*LTGHSRIAERA Trigger: TGCTCTTTCAGCTATTCTAGAGTGGCCTGTGAGCAAATGAACTTCTCTCTCTCTCTCTCTCTCTCTCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | AGACACCGGTCTGTAGGCTGGCACCTGGGCTCCGGGCTCCAAGGCTaGCACGTGGGATGCGCTACCCTGCAGCTCCGCCAGCCACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHRSVGWHLGSGLQG*HVGCATLQLRQPHL Trigger: GAGGTGTGGCTGGCGGAGCTGCAGGGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGCCTACAGACCGGTGTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 90 bp | GTAGGCTGGCACCTGGGCTCCGGGCTCCAAGGCTGGCACGTGGGATaGGCTACCCTGCAGCTCCGCCAGCCACACCTCTTCCACTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: VGWHLGSGLQGWHVG*ATLQLRQPHLFHFT Trigger: TGTAAAGTGGAAGAGGTGTGGCTGGCGGAGCTGCAGGGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGCCTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | CTTCCTCTTCGGGACGTCGATGTTCCTAGACACCGGTCTGTAGGCTaGCACCTGGGCTCCGGGCTCCAAGGCTGGCACGTGGGATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLRDVDVPRHRSVG*HLGSGLQGWHVGCA Trigger: AGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGCCTACAGACCGGTGTCTAGGAACATCGACGTCCCGAAGAGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 90 bp | TGTGGGTGGCCTGAGGTTCCCAGAGCTTTGAGGAGCTCCTTGGGCTaGTCCTGGCACACAGGGTCCTTAGAGGTGAGTGGGGACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CGWPEVPRALRSSLG*SWHTGSLEVSGDRD Trigger: GTCCCTGTCCCCACTCACCTCTAAGGACCCTGTGTGCCAGGAGCAGCCCAAGGAGCTCCTCAAAGCTCTGGGAACCTCAGGCCACCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066994.7 ENSMUST00000224623.2 ENSMUST00000224687.2 |
||
| CDS CCA 90 bp | CTTGGCCTCTCCACGGGCTTTCCTGGTGCTGCTCTGAGCACGGGGTaGGGAGGTGACAATCAGGTGAGACTTCACTGTAGGTGGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSTGFPGAALSTG*GGDNQVRLHCRWRL Trigger: CAGCCGCCACCTACAGTGAAGTCTCACCTGATTGTCACCTCCCCACCCCGTGCTCAGAGCAGCACCAGGAAAGCCCGTGGAGAGGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCGAGGTTCCCAGAGCTTaGAGGAGCTCCTTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IISLCSADGCRPGGFPAAEVPRA*RSSLGC Trigger: GCAGCCCAAGGAGCTCCTCAAAGCTCTGGGAACCTC...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | GAGCTCCTTGGGCTGCTCCTGGCACACAGGGTCCTTAGAGGTGAGTaGGGACAGGGACATGGCTCCTTCCGGCACTTCTATCTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELLGLLLAHRVLRGE*GQGHGSFRHFYLWL Trigger: GAGCCACAGATAGAAGTGCCGGAAGGAGCCATGTCCCTGTCCCCACTCACCTCTAAGGACCCTGTGTGCCAGGAGCAGCCCAAGGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066994.7 ENSMUST00000224623.2 ENSMUST00000224687.2 |
||
| CDS CCA 90 bp | GAGAAGACTCCAGGCCAGGGTGTTCTGGGCCAGATGACTGGACCTTaGCTGGAGGCAATGAAAGAGCAGCAAGGGACGGGCTGGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: EKTPGQGVLGQMTGP*LEAMKEQQGTGWSP Trigger: GGGTGACCAGCCCGTCCCTTGCTGCTCTTTCATTGCCTCCAGCCAAGGTCCAGTCATCTGGCCCAGAACACCCTGGCCTGGAGTCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | GAGGGCAGAGAAGACTCCAGGCCAGGGTGTTCTGGGCCAGATGACTaGACCTTGGCTGGAGGCAATGAAAGAGCAGCAAGGGACGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGREDSRPGCSGPDD*TLAGGNERAARDGL Trigger: CAGCCCGTCCCTTGCTGCTCTTTCATTGCCTCCAGCCAAGGTCCAGTCATCTGGCCCAGAACACCCTGGCCTGGAGTCTTCTCTGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | ATCATCTCCCTGTGTTCTGCTGATGGCTGCAGGCCTGGAGGCTTCCCGGCTGCCACCTTACGGCACTTCTaGGCCTCTCCACGGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IISLCSADGCRPGGFPAATLRHF*ASPRAF Trigger: GAAAGCCCGTGGAGAGGCCAAGAAGTGCCGTAAGGT...GGCAGCCGGGAAGCCTCCAGGCCTGCAGCCATCAGCAGAACACAGGGAGATGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 90 bp | CAGAGAAGATGGGCTCAGCCCCAGGAGGACTCTGCACAACGGGACTaGAAGACAGAGACGTCAGCACCATGGCGGCCATCATCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRRWAQPQEDSAQRD*KTETSAPWRPSSRP Trigger: TGGACGAGATGATGGCCGCCATGGTGCTGACGTCTCTGTCTTGCAGTCCCGTTGTGCAGAGTCCTCCTGGGGCTGAGCCCATCTTCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | TCCGCCAGCCACACCTCTTCCACTTTACAGCGAATCTGTAACTTCTaGTCCAGCAGCCGGACGGTCACCTTGTCCTCGGCCCAGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASHTSSTLQRICNF*SSSRTVTLSSAQLC Trigger: GCACAGCTGGGCCGAGGACAAGGTGACCGTCCGGCTGCTGGACCAGAAGTTACAGATTCGCTGTAAAGTGGAAGAGGTGTGGCTGGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | TCTCCTTCCACAGGTCACCGCAGGCTGCACGGGAAACAGAGAAGATaGGCTCAGCCCCAGGAGGACTCTGCACAACGGGACTGCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSTGHRRLHGKQRR*AQPQEDSAQRDCKT Trigger: TGTCTTGCAGTCCCGTTGTGCAGAGTCCTCCTGGGGCTGAGCCCATCTTCTCTGTTTCCCGTGCAGCCTGCGGTGACCTGTGGAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 90 bp | GAGGACTCTGCACAACGGGACTGCAAGACAGAGACGTCAGCACCATaGCGGCCATCATCTCGTCCATCTCCACCGCATCCGACTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDSAQRDCKTETSAP*RPSSRPSPPHPTSS Trigger: AGAGGAAGTCGGATGCGGTGGAGATGGACGAGATGATGGCCGCCATGGTGCTGACGTCTCTGTCTTGCAGTCCCGTTGTGCAGAGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | GAGCAAAGGATTCACCAGCTCAGAACAAAACCAGGCAAGGCAGCATCCTGTCCTGCTTTGAGGAGCTCCTaGGGCTGCTCCTGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: EQRIHQLRTKPGKAASCPALRSS*GCSWHT Trigger: TGTGTGCCAGGAGCAGCCCAAGGAGCTCCTCAAAGC...AGGACAGGATGCTGCCTTGCCTGGTTTTGTTCTGAGCTGGTGAATCCTTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATAGCATCCCCCAGGTACTaGGGGCTGGCCTGCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PNQGWDENTFAEVDTQSIASPRY*GLACGW Trigger: CCATCCGCAGGCCAGCCCCAAGTACCTGGGGGATGC...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS TCA 90 bp | GCTGGTTCGTCTAACAGGAAAGGGTCAGGATCAGTCTCAAAGCCATaGTCAGTTTGGGGAGACCCAAAGGCATCCCCCAGGTACTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSNRKGSGSVSKP*SVWGDPKASPRYLG Trigger: CCCCAAGTACCTGGGGGATGCCTTTGGGTCTCCCCAAACTGATCATGGCTTTGAGACTGATCCTGACCCTTTCCTGTTAGACGAACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | TGCAAATGGAGGAAATTATATTCAGTTACGTCTGCAAGCTCCAAACCAAGGCTGAGCCGGACGGTCACCTaGTCCTCGGCCCAGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CKWRKLYSVTSASSKPRLSRTVT*SSAQLC Trigger: GCACAGCTGGGCCGAGGACAAGGTGACCGTCCGGCT...CAGCCTTGGTTTGGAGCTTGCAGACGTAACTGAATATAATTTCCTCCATTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | TTCATAGGGTCCTCTAAGGTGTCCAGCTACACACTCACTCCGACAAGGCAGCCAAAAGCCATGATCAGTTaGGGGAGACCCAAAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FIGSSKVSSYTLTPTRQPKAMIS*GRPKGI Trigger: GATGCCTTTGGGTCTCCCCAAACTGATCATGGCTTT...TGGCTGCCTTGTCGGAGTGAGTGTGTAGCTGGACACCTTAGAGGACCCTATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | CCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAGTGGACACTCAGTCTATAGAGCCAGGAGCTGACTaGCTGAGTGCAACTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PNQGWDENTFAEVDTQSIEPGAD*LSATEG Trigger: GCCCTCAGTTGCACTCAGCAAGTCAGCTCCTGGCTC...TATAGACTGAGTGTCCACTTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | TACTTAGTGTGCCTTAGACTGAGAAGTAGATGTTTCCCATGTGGCACCACCAGTCTGGGCCACAGGCACTaGTACATCACCTTCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLVCLRLRSRCFPCGTTSLGHRH*YITFTE Trigger: CTCCGTGAAGGTGATGTACAAGTGCCTGTGGCCCAG...ACTGGTGGTGCCACATGGGAAACATCTACTTCTCAGTCTAAGGCACACTAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | CAGTTACGTCTGCAAGCTCCAAACCAAGGCTGGGATGAAAACACCTTTGCTGAAATTGAACGGAGAACTTaGCCACAGCTGGGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLRLQAPNQGWDENTFAEIERRT*PQLGHR Trigger: CCTGTGGCCCAGCTGTGGCAAAGTTCTCCGTTCAAT...TTCAGCAAAGGTGTTTTCATCCCAGCCTTGGTTTGGAGCTTGCAGACGTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS-3UTR CAA 90 bp | GAGCAAAGGATTCACCAGCTCAGAACAAAACCAGGCAAGGCAGCATCCTGTCCTGCTTTGACGTGTCGTTaGATGCCCACAATTGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: EQRIHQLRTKPGKAASCPALTCR*MPTIER Trigger: CCGTTCAATTGTGGGCATCAAACGACACGTCAAAGC...AGGACAGGATGCTGCCTTGCCTGGTTTTGTTCTGAGCTGGTGAATCCTTTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 72 bp | GCTGGCACCTGGGCTCCGGGCTCCAAGGCTGGCACGTaGGATGCGCTACCCTGCAGCTCCGCCAGCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: AGTWAPGSKAGT*DALPCSSASHT Trigger: GGTGTGGCTGGCGGAGCTGCAGGGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 72 bp | CACCTGGGCTCCGGGCTCCAAGGCTGGCACGTGGGATaGGCTACCCTGCAGCTCCGCCAGCCACACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLGSGLQGWHVG*ATLQLRQPHLF Trigger: GAAGAGGTGTGGCTGGCGGAGCTGCAGGGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 72 bp | TCTGTAGGCTGGCACCTGGGCTCCGGGCTCCAAGGCTaGCACGTGGGATGCGCTACCCTGCAGCTCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVGWHLGSGLQG*HVGCATLQLRQ Trigger: CTGGCGGAGCTGCAGGGTAGCGCATCCCACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGCCTACAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 72 bp | CGGGACGTCGATGTTCCTAGACACCGGTCTGTAGGCTaGCACCTGGGCTCCGGGCTCCAAGGCTGGCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: RDVDVPRHRSVG*HLGSGLQGWHV Trigger: CACGTGCCAGCCTTGGAGCCCGGAGCCCAGGTGCCAGCCTACAGACCGGTGTCTAGGAACATCGACGTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS TCA 72 bp | ACTGCTCCCGCTCCAGTGCCCGCTGCTGCCGCTGTCTaGAACATCACCGCTCTCCTTCCACAGGTCACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TAPAPVPAAAAV*NITALLPQVTA Trigger: TGCGGTGACCTGTGGAAGGAGAGCGGTGATGTTTCAGACAGCGGCAGCAGCGGGCACTGGAGCGGGAGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CAA 90 bp | GCCACCTGTGGGTGGCCTGAGGTTCCCAGAGCTTTGAGGAGCTCCTaGGGCTGCTCCTGGCACACAGGGTCCTTAGAGGTGAGTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATCGWPEVPRALRSS*GCSWHTGSLEVSGD Trigger: GTCCCCACTCACCTCTAAGGACCCTGTGTGCCAGGAGCAGCCCAAGGAGCTCCTCAAAGCTCTGGGAACCTCAGGCCACCCACAGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066994.7 ENSMUST00000224623.2 ENSMUST00000224687.2 |
||
| CDS GCA 72 bp | TGGGCTCAGCCCCAGGAGGACTCTGCACAACGGGACTaGAAGACAGAGACGTCAGCACCATGGCGGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: WAQPQEDSAQRD*KTETSAPWRPS Trigger: TGATGGCCGCCATGGTGCTGACGTCTCTGTCTTGCAGTCCCGTTGTGCAGAGTCCTCCTGGGGCTGAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 72 bp | CCTGAGGTTCCCAGAGCTTTGAGGAGCTCCTTGGGCTaGTCCTGGCACACAGGGTCCTTAGAGGTGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PEVPRALRSSLG*SWHTGSLEVSG Trigger: CCCACTCACCTCTAAGGACCCTGTGTGCCAGGAGCAGCCCAAGGAGCTCCTCAAAGCTCTGGGAACCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066994.7 ENSMUST00000224623.2 ENSMUST00000224687.2 |
||
| CDS CCA 72 bp | GGGCTGCTCCTGGCACACAGGGTCCTTAGAGGTGAGTaGGGACAGGGACATGGCTCCTTCCGGCACTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GLLLAHRVLRGE*GQGHGSFRHFY Trigger: ATAGAAGTGCCGGAAGGAGCCATGTCCCTGTCCCCACTCACCTCTAAGGACCCTGTGTGCCAGGAGCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066994.7 ENSMUST00000224623.2 ENSMUST00000224687.2 |
||
| CDS CCA 72 bp | GCACAACGGGACTGCAAGACAGAGACGTCAGCACCATaGCGGCCATCATCTCGTCCATCTCCACCGCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: AQRDCKTETSAP*RPSSRPSPPHP Trigger: CGGATGCGGTGGAGATGGACGAGATGATGGCCGCCATGGTGCTGACGTCTCTGTCTTGCAGTCCCGTTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CAA 90 bp | AGAGAAGACTCCAGGCCAGGGTGTTCTGGGCCAGATGACTGGACCTaGGCTGGAGGCAATGAAAGAGCAGCAAGGGACGGGCTGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: REDSRPGCSGPDDWT*AGGNERAARDGLVT Trigger: GGTGACCAGCCCGTCCCTTGCTGCTCTTTCATTGCCTCCAGCCAAGGTCCAGTCATCTGGCCCAGAACACCCTGGCCTGGAGTCTTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 72 bp | TCCACGGGCTTTCCTGGTGCTGCTCTGAGCACGGGGTaGGGAGGTGACAATCAGGTGAGACTTCACTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: STGFPGAALSTG*GGDNQVRLHCR Trigger: CCTACAGTGAAGTCTCACCTGATTGTCACCTCCCCACCCCGTGCTCAGAGCAGCACCAGGAAAGCCCGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS GCA 72 bp | GAAACAGAGAAGATGGGCTCAGCCCCAGGAGGACTCTaGACAACGGGACTGCAAGACAGAGACGTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: ETEKMGSAPGGL*TTGLQDRDVST Trigger: GGTGCTGACGTCTCTGTCTTGCAGTCCCGTTGTGCAGAGTCCTCCTGGGGCTGAGCCCATCTTCTCTGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CCA 72 bp | CACACCTCTTCCACTTTACAGCGAATCTGTAACTTCTaGTCCAGCAGCCGGACGGTCACCTTGTCCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSSTLQRICNF*SSSRTVTLSSA Trigger: GGCCGAGGACAAGGTGACCGTCCGGCTGCTGGACCAGAAGTTACAGATTCGCTGTAAAGTGGAAGAGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CAA 90 bp | TCAGAGTCAACAGTGTCCCCCAGGTGGAGGGCTTTGACGTGTCGTTaGATGCCCACAATTGAACGGAGAACTTTGCCACAGCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SESTVSPRWRALTCR*MPTIERRTLPQLGH Trigger: GTGGCCCAGCTGTGGCAAAGTTCTCCGTTCAATTGTGGGCATCAAACGACACGTCAAAGCCCTCCACCTGGGGGACACTGTTGACTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS TCA 72 bp | GTGGAGGGCTTTGACGTGTCGTTTGATGCCCACAATTaGACGGAGAACTTTGCCACAGCTGGGCCACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VEGFDVSFDAHN*TENFATAGPQA Trigger: TGCCTGTGGCCCAGCTGTGGCAAAGTTCTCCGTTCAATTGTGGGCATCAAACGACACGTCAAAGCCCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CAA 72 bp | GAAAGGGTCAGGATCAGTCTCAAAGCCATGATCAGTTaGGGGAGACCCAAAGGCATCCCCCAGGTACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERVRISLKAMIS*GRPKGIPQVLG Trigger: CCCAAGTACCTGGGGGATGCCTTTGGGTCTCCCCAAACTGATCATGGCTTTGAGACTGATCCTGACCCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS CAA 72 bp | ACAGTGTCCCCCAGGTGGAGGGCTTTGACGTGTCGTTaGATGCCCACAATTGAACGGAGAACTTTGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVSPRWRALTCR*MPTIERRTLPQ Trigger: CTGTGGCAAAGTTCTCCGTTCAATTGTGGGCATCAAACGACACGTCAAAGCCCTCCACCTGGGGGACACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
||
| CDS TCA 72 bp | TCTAACAGGAAAGGGTCAGGATCAGTCTCAAAGCCATaGTCAGTTTGGGGAGACCCAAAGGCATCCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SNRKGSGSVSKP*SVWGDPKASPR Trigger: CCTGGGGGATGCCTTTGGGTCTCCCCAAACTGATCATGGCTTTGAGACTGATCCTGACCCTTTCCTGTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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| CDS TCA 72 bp | TCTGCATCTCTGTGTAGTAAAAGTCTTCCTCCCGCTTaGACTGATCAGAGTCAACAGTGTCCCCCAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SASLCSKSLPPA*TDQSQQCPPGG Trigger: TCCACCTGGGGGACACTGTTGACTCTGATCAGTTCAAGCGGGAGGAAGACTTTTACTACACAGAGATGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066994.7 |
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