Pregenerated sensors for ZFP39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037001Ensembl transcript IDs: ENSMUST00000102703.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCAGGGTCTCATaGATGTTACACATATATCTTACCACTGGGCTACATGCGTACCTC | + |
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Preference number: 1 (lower is better) Translates to: FEFMHVCGEAETRVS*MLHIYLTTGLHAYL Trigger: GAGGTACGCATGTAGCCCAGTGGTAAGATATATGTGTAACATTCATGAGACCCTGGTTTCAGCCTCACCACATACATGCATAAACTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR GCA 90 bp | CAGCCAACTTGTGCCACACAGAATTTCCTGTGTAAAGTTAGCACTTaGAAAGGTGTCCTTTCTTGCAAAAACATTGTCCACACTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: QPTCATQNFLCKVST*KGVLSCKNIVHTVT Trigger: TGTGACAGTGTGGACAATGTTTTTGCAAGAAAGGACACCTTTGCAAGTGCTAACTTTACACAGGAAATTCTGTGTGGCACAAGTTGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR TCA 90 bp | CCTCCAGTTACAATAACCGCAAATGTTCCCAGATACAATGTGCTCTaGCAGACAATAATATCACTCACATATTTATTGGCACATGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PPVTITANVPRYNVL*QTIISLTYLLAHVW Trigger: CCACACATGTGCCAATAAATATGTGAGTGATATTATTGTCTGTCAGAGCACATTGTATCTGGGAACATTTGCGGTTATTGTAACTGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAATGTTACACATATATCTTACCACTGGGCTACATGCGTACCTCAGTCCCTTTGTCTGGTGCCAGCTaGTGGTTCCTGCTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: HECYTYILPLGYMRTSVPLSGAS*WFLLTE Trigger: CTCTGTCAGCAGGAACCATCAGCTGGCACCAGACAA...AGGGACTGAGGTACGCATGTAGCCCAGTGGTAAGATATATGTGTAACATTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCACATGCCTTGTCTGGTaGCAGCTGATGGTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: DVEICRFEFMHVCGEAETTCLVW*QLMVPA Trigger: AGCAGGAACCATCAGCTGGCACCAGACAAGGCATGT...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCCAGACCCAGAGCTCATaGGAACTTAGGGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: DVEICRFEFMHVCGEAETQTQSS*ELREEE Trigger: TTCTTCCTCCCTAAGTTCTCATGAGCTCTGGGTCTG...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACAAGACAGCCAACTTGTaGCACACAGAATTTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: MECRTRGAQISGQQIVAHKTANL*HTEFPV Trigger: CACAGGAAATTCTGTGTGGCACAAGTTGGCTGTCTT...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAAGTAGGTTTGAGTTTATaGATGTATGTGGTGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AFIWRMECRTRGAQISGQVGLSL*MYVVRL Trigger: CAGCCTCACCACATACATGCATAAACTCAAACCTAC...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAAAAGAACTGTTGCTTGTaGCTCTTTAAGTGTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AFIWRMECRTRGAQISGQKNCCL*LFKCQL Trigger: CAGCTGACACTTAAAGAGCCACAAGCAACAGTTCTT...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACATGTGTGTGTGTTACATaGTCACACAGACCCTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTCVCVT*SHRPSV Trigger: TACTGAGGGTCTGTGTGATCATGTAACACACACACA...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACAAAATGGGGGACTTTCTaGCAATGGATGTCAAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTKWGTF*QWMSRL Trigger: TAGCCTTGACATCCATTGTCAGAAAGTCCCCCATTT...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGCTGGCCCCTATTACTaGATGCCAGTAGCAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: CKLGKLKQTTSVQRFHMEAGPYY*MPVATP Trigger: TGGAGTTGCTACTGGCATGCAGTAATAGGGGCCAGC...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR CAA 90 bp | TATGAACACATGCTAGAGTGGTATTTGATGTGGAGATTTGTAGGTTaGAGTTTATGCATGTATGTGGTGAGGCTGAAACCAGGGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: YEHMLEWYLMWRFVG*SLCMYVVRLKPGSH Trigger: ATGAGACCCTGGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATCAAATACCACTCTAGCATGTGTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACAAAAGGTGTCCTTTCTTaGAAAAACATTGTCCACACT | + |
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Preference number: 2 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTKGVLS*KNIVHT Trigger: AGTGTGGACAATGTTTTTGCAAGAAAGGACACCTTT...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCTGTAAAGTTAGCACTTaGAAAGGTGTCCTTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: DVEICRFEFMHVCGEAETCKVST*KGVLSC Trigger: GCAAGAAAGGACACCTTTGCAAGTGCTAACTTTACA...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGAGGGGACAAAAATGAATaGTTTCCAGTCAGTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGGDKNE*FPVSSF Trigger: AAAAGAACTGACTGGAAATCATTCATTTTTGTCCCC...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGATTCTCCCAGTTGTATTaGGTTAGTGCATTCTTACAA | + |
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Preference number: 2 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGFSQLY*VSAFLQ Trigger: TTGTAAGAATGCACTAACTCAATACAACTGGGAGAA...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGTGGACAACAAATTGTTaGTCACCAAGAGCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: CKLGKLKQTTSVQRFHMEWTTNC*SPRALK Trigger: CTTCAGTGCTCTTGGTGAGCAACAATTTGTTGTCCA...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCTTATTGGCACATGTGTaGCTCCATTTGAAAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: DVEICRFEFMHVCGEAETLLAHV*LHLKVN Trigger: ATTAACTTTCAAATGGAGCCACACATGTGCCAATAA...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR TCA 90 bp | AATAACCGCAAATGTTCCCAGATACAATGTGCTCTGACAGACAATAATATCACTAGTTGGGGACAAAAATaGATGATTTCCAGTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NNRKCSQIQCALTDNNITSWGQK*MISSQF Trigger: GAACTGACTGGAAATCATTCATTTTTGTCCCCAACT...AGTGATATTATTGTCTGTCAGAGCACATTGTATCTGGGAACATTTGCGGTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACATAAGAACTGTTGCTaGTGGCTCTTTAAGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: AFIWRMECRTRGAQISGQHKNCC*WLFKCQ Trigger: CTGACACTTAAAGAGCCACAAGCAACAGTTCTTATG...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR TCA 72 bp | ATAAGTGGACAACAAATTGTTGCTCACCAAGAGCACTaGAGCCGACATAAGAACTGTTGCTTGTGGCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: ISGQQIVAHQEH*SRHKNCCLWLF Trigger: AAAGAGCCACAAGCAACAGTTCTTATGTCGGCTTCAGTGCTCTTGGTGAGCAACAATTTGTTGTCCACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR CCA 72 bp | CAGGGTCTCATGAATGTTACACATATATCTTACCACTaGGCTACATGCGTACCTCAGTCCCTGTTTAACAAA | + |
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Preference number: 3 (lower is better) Translates to: QGLMNVTHISYH*ATCVPQSLFNK Trigger: TTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGTGGTAAGATATATGTGTAACATTCATGAGACCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACTCTGACATGGAAGTTTaGTTCAAAGTTTCACCTGTT | + |
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Preference number: 3 (lower is better) Translates to: MECRTRGAQISGQQIVAHSDMEV*FKVSPV Trigger: AACAGGTGAAACTTTGAACAAAACTTCCATGTCAGA...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCAAGAGTGGAGATTTGTAGGTTaGAGTTTATGCATGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: CRTRGAQISGQQIVAHQEWRFVG*SLCMYV Trigger: CACATACATGCATAAACTCAAACCTACAAATCTCCA...CTCTTGGTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR GCA 72 bp | TGTGCCACACAGAATTTCCTGTGTAAAGTTAGCACTTaGAAAGGTGTCCTTTCTTGCAAAAACATTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: CATQNFLCKVST*KGVLSCKNIVH Trigger: GTGGACAATGTTTTTGCAAGAAAGGACACCTTTGCAAGTGCTAACTTTACACAGGAAATTCTGTGTGGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGTCACTCACATATTTATaGGCACATGTGTGGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: CKLGKLKQTTSVQRFHMESLTYL*AHVWLH Trigger: ATGGAGCCACACATGTGCCAATAAATATGTGAGTGA...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACTTTGGGACGTCTTCTaGTCTCCATGGCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AFIWRMECRTRGAQISGQLWDVF*SPWLSS Trigger: GGAGCTGAGCCATGGAGAGCAGAAGACGTCCCAAAG...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAATGCTCGGCTCTGCTTTaGGACGTCTTCTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AFIWRMECRTRGAQISGQCSALL*DVFCSP Trigger: TGGAGAGCAGAAGACGTCCCAAAGCAGAGCCGAGCA...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACGCCACTCATCCCAGGTaGAGTCCACAGACACATCCT | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHATHPR*SPQTHP Trigger: AGGATGTGTCTGTGGACTTCACCTGGGATGAGTGGC...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAAAGAGTCGGGCTTCTCTaGGGACTCTTTCGTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: AFIWRMECRTRGAQISGQRVGLL*GLFRAH Trigger: ATGTGCACGAAAGAGTCCCCAGAGAAGCCCGACTCT...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCATCGACTGGGGAGTTaGCTCAAGGAGTTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHHRLGS*LKEFST Trigger: TGTGGAGAACTCCTTGAGTCAACTCCCCAGTCGATG...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACCTGCATGTACCCTCTaGTCTGTGTGGTATGATTCC | + |
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Preference number: 4 (lower is better) Translates to: AFIWRMECRTRGAQISGQPACTL*SVWYDS Trigger: GGAATCATACCACACAGACCAGAGGGTACATGCAGG...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GCTTTCATATGGAGGATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACACAGGCCTCATTCCTaGGGAGTTTCCATTCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: AFIWRMECRTRGAQISGQHRPHS*GVSILY Trigger: GTAAAGAATGGAAACTCCTCAGGAATGAGGCCTGTG...TTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCATCCTCCATATGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACTGCCTTGTGTTTTCTTaGTCTATTCCGCTGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHCLVFS*SIPLGP Trigger: CGGACCCAGCGGAATAGAGCAAGAAAACACAAGGCA...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACTCCTCTGATGTATGGTaGGGGAGGACTTATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHSSDVW*GRTYGR Trigger: TCTACCATAAGTCCTCCCTCACCATACATCAGAGGA...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | TGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCAAGAGCTGGGGACTCTTTCGTaGACATTTTGCTGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CRTRGAQISGQQIVAHQELGTLS*TFCWFF Trigger: GAAGAACCAGCAAAATGTGCACGAAAGAGTCCCCAG...CTCTTGGTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | TGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCAAGAGCTCTCTTCATTGTCCTaGCTGGTTTCGTTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CRTRGAQISGQQIVAHQELSSLS*LVSFSS Trigger: GGAACTGAACGAAACCAGCCAGGACAATGAAGAGAG...CTCTTGGTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCCATGGCTCAGCTCCTTaGTCCAGCTTAAAGATCACC | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETHGSAP*SSLKIT Trigger: GGTGATCTTTAAGCTGGAGCAAGGAGCTGAGCCATG...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGGTTTGGTAATGCAGTaGCCCAAGGACTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CKLGKLKQTTSVQRFHMEGLVMQ*PKDSRL Trigger: CAGCCTGGAGTCCTTGGGCCACTGCATTACCAAACC...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCAGACACATCCTCAAATaGCACCAACCCCTTTACTGG | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETRHILK*HQPLYW Trigger: CCAGTAAAGGGGTTGGTGTCATTTGAGGATGTGTCT...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGATCTTGCATACAACACTaGAACTGCTGTCCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGSCIQH*NCCPVP Trigger: AGGCACTGGACAGCAGTTTCAGTGTTGTATGCAAGA...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGTGCCTGCCAAGGTGTaGCTTGCGGTAAAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CKLGKLKQTTSVQRFHMEVPAKV*LAVKCL Trigger: AAGGCATTTTACCGCAAGTCACACCTTGGCAGGCAC...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGAGGTTTGACTTACGGCTaGAGGCTTTCTGACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGGLTYG*RLSDTL Trigger: AAGAGTGTCAGAAAGCCTTCAGCCGTAAGTCAAACC...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | CATGAATGTTACACATATATCTTACCACTGGGCTACATGCGTACCTCAGTCCCTATGTCTTCTGAGGCTTaGCTTCTGGTAGAACGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HECYTYILPLGYMRTSVPMSSEA*LLVERF Trigger: AAAGCGTTCTACCAGAAGTCAAGCCTCAGAAGACAT...AGGGACTGAGGTACGCATGTAGCCCAGTGGTAAGATATATGTGTAACATTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCTTACTGGACCCATGTaGAATGTGAAACCTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHLTGPM*NVKPLS Trigger: ACTAAGAGGTTTCACATTGCACATGGGTCCAGTAAG...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACAGTAACTGTAGGTGACTaGCCTCTTCTTGTAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTVTVGD*PLLVAS Trigger: AGAAGCTACAAGAAGAGGCCAGTCACCTACAGTTAC...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACACCCTCTGGTCTGTGTaGTATGATTCCTTAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: MECRTRGAQISGQQIVAHTLWSV*YDSLMK Trigger: CTTCATTAAGGAATCATACCACACAGACCAGAGGGT...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCGTTGCTGTAGGTAATTaGATGGTGCCACAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETVAVGN*MVPQMS Trigger: AGACATCTGTGGCACCATGCAATTACCTACAGCAAC...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCACTCGCCAAACTTACTaGACCCATGTGCAATGTGAA | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETTRQTY*THVQCE Trigger: TTCACATTGCACATGGGTCCAGTAAGTTTGGCGAGT...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCTGCTGGTTCTTCTGGTaGAAACATTTCTCACATTGT | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETCWFFW*KHFSHC Trigger: ACAATGTGAGAAATGTTTTCACCAGAAGAACCAGCA...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GGACAATATTTGAGAAAATATGAACACATGCTAGAGTGGTATTTGATGTGGAGACTCAGGTGGATTCTCTaGTGTACAGTGAGGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GQYLRKYEHMLEWYLMWRLRWIL*CTVRED Trigger: GTCTTCCCTCACTGTACATCAGAGAATCCACCTGAG...TCTCCACATCAAATACCACTCTAGCATGTGTTCATATTTTCTCAAATATTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR GCA 90 bp | AATAACCGCAAATGTTCCCAGATACAATGTGCTCTGACAGACAATAATATCACTACATTCAAAAGTTTCTaGCCGTACCCAGCTCACGTC | + |
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Preference number: 4 (lower is better) Translates to: NNRKCSQIQCALTDNNITTFKSF*PYPAHV Trigger: GACGTGAGCTGGGTACGGGCAGAAACTTTTGAATGT...AGTGATATTATTGTCTGTCAGAGCACATTGTATCTGGGAACATTTGCGGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GATGTGGAGATTTGTAGGTTTGAGTTTATGCATGTATGTGGTGAGGCTGAAACCATGTATCACAAGGTGTaGCTTAGAGTAGAACGTTTT | + |
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Preference number: 4 (lower is better) Translates to: DVEICRFEFMHVCGEAETMYHKV*LRVERF Trigger: AAAACGTTCTACTCTAAGTCACACCTTGTGATACAT...GGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| 3UTR CAA 72 bp | ATGCTAGAGTGGTATTTGATGTGGAGATTTGTAGGTTaGAGTTTATGCATGTATGTGGTGAGGCTGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: MLEWYLMWRFVG*SLCMYVVRLKP Trigger: TGGTTTCAGCCTCACCACATACATGCATAAACTCAAACCTACAAATCTCCACATCAAATACCACTCTAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR TCA 90 bp | GGACAATATTTGAGAAAATATGAACACATGCTAGAGTGGTATTTGATGTGGAGAAGGTATGACTTCTGGTaGAAAGCCTTCTTGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: GQYLRKYEHMLEWYLMWRRYDFW*KAFLHS Trigger: GCTATGCAAGAAGGCTTTTCACCAGAAGTCATACCT...TCTCCACATCAAATACCACTCTAGCATGTGTTCATATTTTCTCAAATATTGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | CATGAATGTTACACATATATCTTACCACTGGGCTACATGCGTACCTCAGTCCCTCTGCTCGGCTCTGCTTaGGGACGTCTTCTGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HECYTYILPLGYMRTSVPLLGSA*GRLLLS Trigger: GGAGAGCAGAAGACGTCCCAAAGCAGAGCCGAGCAG...AGGGACTGAGGTACGCATGTAGCCCAGTGGTAAGATATATGTGTAACATTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CCA 90 bp | ATAGGGCTTATAACCGGCACGGGTCCTCTGATAGCGCCTGAGATTTaGCTTCTCGCCAAAGCTGTTTTCAGACTGATAAACTTCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: IGLITGTGPLIAPEI*LLAKAVFRLINFPE Trigger: CTCTGGGAAGTTTATCAGTCTGAAAACAGCTTTGGCGAGAAGCCAAATCTCAGGCGCTATCAGAGGACCCGTGCCGGTTATAAGCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACAGTGCCTTGTGTTTTCTaGCTCTATTCCGCTGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTVPCVF*LYSAGS Trigger: GGACCCAGCGGAATAGAGCAAGAAAACACAAGGCAC...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | TGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACCAAGAGAGATGTCTCTCTTCATaGTCCTGGCTGGTTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: CRTRGAQISGQQIVAHQERCLSS*SWLVSF Trigger: GAACGAAACCAGCCAGGACAATGAAGAGAGACATCT...CTCTTGGTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGACCCTTTACTGGTGCCTaGTGTTTTCTTGCTCTATTC | + |
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Preference number: 5 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGPFTGA*CFLALF Trigger: GAATAGAGCAAGAAAACACAAGGCACCAGTAAAGGG...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | ATGGAGTGTAGGACCAGGGGAGCACAAATAAGTGGACAACAAATTGTTGCTCACTCTTTACAGTCAGATTaGAAACACAGTTTGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: MECRTRGAQISGQQIVAHSLQSD*KHSLSS Trigger: TGAGCTCAAACTGTGTTTCAAATCTGACTGTAAAGA...GTGAGCAACAATTTGTTGTCCACTTATTTGTGCTCCCCTGGTCCTACACTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | GTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGATGGAGTGTAGGACATAATGCCTTTGTGTaGCAGGTCACTTCTTGCATA | + |
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Preference number: 5 (lower is better) Translates to: VKTDHFCSTLSYGGWSVGHNAFV*QVTSCI Trigger: TATGCAAGAAGTGACCTGCAACACAAAGGCATTATG...TCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | GGACAATATTTGAGAAAATATGAACACATGCTAGAGTGGTATTTGATGTGGAGAAAGATCACCTCAGGTTaGGTAATGCAGTGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GQYLRKYEHMLEWYLMWRKITSG*VMQWPK Trigger: CTTGGGCCACTGCATTACCAAACCTGAGGTGATCTT...TCTCCACATCAAATACCACTCTAGCATGTGTTCATATTTTCTCAAATATTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | TGCAAACTAGGTAAGTTAAAACAGACCACTTCTGTTCAACGCTTTCATATGGAGGTTGCAGGTCACTTCTaGCATACAACACTGAAACTG | + |
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Preference number: 5 (lower is better) Translates to: CKLGKLKQTTSVQRFHMEVAGHF*HTTLKL Trigger: CAGTTTCAGTGTTGTATGCAAGAAGTGACCTGCAAC...CTCCATATGAAAGCGTTGAACAGAAGTGGTCTGTTTTAACTTACCTAGTTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGCTACATGCGTACCTCAGTCCCTGTTTAACAAAGCAAGACATATACACAAAAACATTTCTCACATaGTTTACATCTATGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: TGLHAYLSPCLTKQDIYTKTFLT*FTSMGP Trigger: GGGTCCCATAGATGTAAACAATGTGAGAAATGTTTT...TGTGTATATGTCTTGCTTTGTTAAACAGGGACTGAGGTACGCATGTAGCCCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS-3UTR CAA 90 bp | GGACAATATTTGAGAAAATATGAACACATGCTAGAGTGGTATTTGATGTGGAGACCTACACGTGTAATATaGCTGTCCTTTGTGTATTTT | + |
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Preference number: 5 (lower is better) Translates to: GQYLRKYEHMLEWYLMWRPTRVI*LSFVYF Trigger: AAAATACACAAAGGACAGCAATATTACACGTGTAGG...TCTCCACATCAAATACCACTCTAGCATGTGTTCATATTTTCTCAAATATTGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS GCA 72 bp | TACAACACTGAAACTGCTGTCCAGTGCCTGGAGCTCTaGTATACAACCCAGGATGCTCTGCGTGTATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: YNTETAVQCLEL*YTTQDALRVWG Trigger: CCCCCATACACGCAGAGCATCCTGGGTTGTATAGCAGAGCTCCAGGCACTGGACAGCAGTTTCAGTGTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CCA 72 bp | TTCCGTTATCTTCTGTACATCTGCTCGGCTCTGCTTTaGGACGTCTTCTGCTCTCCATGGCTCAGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: FRYLLYICSALL*DVFCSPWLSSL Trigger: CAAGGAGCTGAGCCATGGAGAGCAGAAGACGTCCCAAAGCAGAGCCGAGCAGATGTACAGAAGATAACGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CAA 72 bp | GTTCCGTTATCTTCTGTACATCTGCTCGGCTCTGCTTaGGGACGTCTTCTGCTCTCCATGGCTCAGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VPLSSVHLLGSA*GRLLLSMAQLL Trigger: AAGGAGCTGAGCCATGGAGAGCAGAAGACGTCCCAAAGCAGAGCCGAGCAGATGTACAGAAGATAACGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS GCA 72 bp | TTCAGTTCCGTTATCTTCTGTACATCTGCTCGGCTCTaGTTTGGGACGTCTTCTGCTCTCCATGGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSSVIFCTSARL*FGTSSALHGSA Trigger: AGCTGAGCCATGGAGAGCAGAAGACGTCCCAAAGCAGAGCCGAGCAGATGTACAGAAGATAACGGAACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS TCA 72 bp | GCCTTTGTGTTGCAGGTCACTTCTTGCATACAACACTaGAACTGCTGTCCAGTGCCTGGAGCTCTGCTATAC | + |
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Preference number: 6 (lower is better) Translates to: AFVLQVTSCIQH*NCCPVPGALLY Trigger: GTATAGCAGAGCTCCAGGCACTGGACAGCAGTTTCAGTGTTGTATGCAAGAAGTGACCTGCAACACAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CAA 72 bp | ACATTCAAAAGTTTCTGCCCGTACCCAGCTCACGTCTaGGGCATGAAGAGCTACCTCATCAGGCACTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: TFKSFCPYPAHV*GMKSYLIRHFL Trigger: GAGAAAGTGCCTGATGAGGTAGCTCTTCATGCCCAAGACGTGAGCTGGGTACGGGCAGAAACTTTTGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CCA 72 bp | TGGGACCCGACTCCTGCATGTACCCTCTGGTCTGTGTaGTATGATTCCTTAATGAAGGTTTTCTCACAATCC | + |
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Preference number: 6 (lower is better) Translates to: WDPTPACTLWSV*YDSLMKVFSQS Trigger: GGATTGTGAGAAAACCTTCATTAAGGAATCATACCACACAGACCAGAGGGTACATGCAGGAGTCGGGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS TCA 72 bp | CCCGACTCCTGCATGTACCCTCTGGTCTGTGTGGTATaGTTCCTTAATGAAGGTTTTCTCACAATCCCTACA | + |
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Preference number: 6 (lower is better) Translates to: PDSCMYPLVCVV*FLNEGFLTIPT Trigger: TGTAGGGATTGTGAGAAAACCTTCATTAAGGAATCATACCACACAGACCAGAGGGTACATGCAGGAGTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CCA 72 bp | CATGGTGCCACAGATGTCTCTCTTCATTGTCCTGGCTaGTTTCGTTCAGTTCCGTTATCTTCTGTACATCTG | + |
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Preference number: 6 (lower is better) Translates to: HGATDVSLHCPG*FRSVPLSSVHL Trigger: CAGATGTACAGAAGATAACGGAACTGAACGAAACCAGCCAGGACAATGAAGAGAGACATCTGTGGCACCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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| CDS CCA 72 bp | TTACATCTATGGGACCCGACTCCTGCATGTACCCTCTaGTCTGTGTGGTATGATTCCTTAATGAAGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LHLWDPTPACTL*SVWYDSLMKVF Trigger: GAAAACCTTCATTAAGGAATCATACCACACAGACCAGAGGGTACATGCAGGAGTCGGGTCCCATAGATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102703.2 |
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