Pregenerated sensors for ZFP385C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014198Ensembl transcript IDs: ENSMUST00000103119.10, ENSMUST00000151589.2, ENSMUST00000153494.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTaGTGTGTGCCTTTAGTTCCGTTACTTAAGAGGCAGAGGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: SRTARAIVSKPDQAG*CVPLVPLLKRQRQV Trigger: TACCTGCCTCTGCCTCTTAAGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR TCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGTGGAGAACCCCAGTCTaGGTGAAGGGCAGCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: YQPETPHLGWPDPVWNGEWRTPV*VKGSYP Trigger: TGGGTAGCTGCCCTTCACTCAGACTGGGGTTCTCCA...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGAGGGAGACCCAGAGCCCCTTTAGAGTTGGGGTTCAAGAGAAACCACTGCCAGACCAGCCAGGATaGCACAGTCAGGCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RLRETQSPFRVGVQEKPLPDQPG*HSQAQP Trigger: AGGCTGGGCCTGACTGTGTCATCCTGGCTGGTCTGG...CAGTGGTTTCTCTTGAACCCCAACTCTAAAGGGGCTCTGGGTCTCCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR TCA 90 bp | GACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTGGTATGAGAGCACCATaGGACTGGGGCTGTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DSQGYCVKARPGRVVCAFGMRAP*DWGCGF Trigger: AAAACCACAGCCCCAGTCTCATGGTGCTCTCATACC...AAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR TCA 90 bp | CATGTCGAATGGGGGAATGGCACTGGCTTTGGTGACATGAAAGTTGATCTTGAGGGAGAGTCCCTAGGCTaGGGGAGACCCAGAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HVEWGNGTGFGDMKVDLEGESLG*GRPRAP Trigger: AGGGGCTCTGGGTCTCCCTCAGCCTAGGGACTCTCC...CTCAAGATCAACTTTCATGTCACCAAAGCCAGTGCCATTCCCCCATTCGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR GCA 90 bp | GACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTTGGGAACCCGGAAACTaGAAAAGGCAGTCTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: DSQGYCVKARPGRVVCAFWEPGN*KRQSLW Trigger: CCACAGAGACTGCCTTTTGCAGTTTCCGGGTTCCCA...AAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGGGCCTCTTATCTCTATaGCCCTTTGCCATACATACC | + |
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Preference number: 2 (lower is better) Translates to: HAFSPSTREAEAGRFLSSGLLSL*PFAIHT Trigger: GGTATGTATGGCAAAGGGCCATAGAGATAAGAGGCC...CGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAAAGGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR GCA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAATCTCTATGGCCCTTTaGCATACATACCCTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: VPARNATLGMARPSVEWRISMAL*HTYPVV Trigger: GACTACAGGGTATGTATGGCAAAGGGCCATAGAGAT...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR GCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGTGGGGCTGTGGTTTTTaGATAGATCTTTGGGATTTG | + |
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Preference number: 2 (lower is better) Translates to: YQPETPHLGWPDPVWNGEWGCGF*IDLWDL Trigger: CAAATCCCAAAGATCTATGCAAAAACCACAGCCCCA...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CCA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGACAGTGTCTAGCTATATaGCTCAAACTGACTTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: VPARNATLGMARPSVEWRQCLAI*LKLTLN Trigger: GTTCAAAGTCAGTTTGAGCCATATAGCTAGACACTG...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CCA 90 bp | GACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTCCTGTAGTCTACTTGTaGTTGTTTTGGTGTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: DSQGYCVKARPGRVVCAFPVVYL*LFWCLR Trigger: TCTCAAACACCAAAACAACCACAAGTAGACTACAGG...AAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGTATGAGAGCACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGAAAAGGCAGTCTCTGTaGGATGTGGAGACAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SGYESTMRLGLWFLHRSLKRQSL*DVETSV Trigger: GACACTTGTCTCCACATCCCACAGAGACTGCCTTTT...CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CAA 90 bp | TATATGGCTCAAACTGACTTTGAACTCGTAATCCAGGCCCTAGGATaGCAGGAATGCACCACCATACCTGGCTACCCCATGGTAAATATG | + |
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Preference number: 2 (lower is better) Translates to: YMAQTDFELVIQALG*QECTTIPGYPMVNM Trigger: CATATTTACCATGGGGTAGCCAGGTATGGTGGTGCATTCCTGCAATCCTAGGGCCTGGATTACGAGTTCAAAGTCAGTTTGAGCCATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CCA 90 bp | TATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTATGAGACTGGGGCTGTaGTTTTTGCATAGATCTTTG | + |
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Preference number: 2 (lower is better) Translates to: YCVKARPGRVVCAFSSVTMRLGL*FLHRSL Trigger: CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCAT...AGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CAA 90 bp | CTTTGCCATACATACCCTGTAGTCTACTTGTGGTTGTTTTGGTGTTaGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTGAACTCG | + |
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Preference number: 2 (lower is better) Translates to: LCHTYPVVYLWLFWC*RQCLAIWLKLTLNS Trigger: CGAGTTCAAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCACAAGTAGACTACAGGGTATGTATGGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR TCA 72 bp | CCTCAGAGCCAGGGGACTGGAGAACCCCAGTCTGAGTaGAGGGCAGCTACCCAGGTTGGGTGGGAACCCGGA | + |
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Preference number: 3 (lower is better) Translates to: PQSQGTGEPQSE*RAATQVGWEPG Trigger: TCCGGGTTCCCACCCAACCTGGGTAGCTGCCCTTCACTCAGACTGGGGTTCTCCAGTCCCCTGGCTCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CCA 72 bp | AACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATaGAGAGTCCCTAGGCTGAGGGAGACCCAGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: NATLGMARPSVE*RVPRLRETQSP Trigger: GGGGCTCTGGGTCTCCCTCAGCCTAGGGACTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CCA 72 bp | TGGACCATGTACCAGCCCGAAACGCCACACTTGGGATaGCCAGACCCAGTGTGGAATGGAGAGTCCCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: WTMYQPETPHLG*PDPVWNGESLG Trigger: GCCTAGGGACTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTACATGGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR TCA 72 bp | TGCCAGCCTGAGCATACAGTCCCAGACCAGCCAGGATaGCACAGTCAGGCCCAGCCTGAACACCACTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: CQPEHTVPDQPG*HSQAQPEHHFS Trigger: GGAAAAGTGGTGTTCAGGCTGGGCCTGACTGTGTCATCCTGGCTGGTCTGGGACTGTATGCTCAGGCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR GCA 72 bp | AGGGCAGCTACCCAGGTTGGGTGGGAACCCGGAAACTaGAAAAGGCAGTCTCTGTGGGATGTGGAGACAAGT | + |
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Preference number: 3 (lower is better) Translates to: RAATQVGWEPGN*KRQSLWDVETS Trigger: ACTTGTCTCCACATCCCACAGAGACTGCCTTTTGCAGTTTCCGGGTTCCCACCCAACCTGGGTAGCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CCA 72 bp | TTTACTGGACCATGTACCAGCCCGAAACGCCACACTTaGGATGGCCAGACCCAGTGTGGAATGGAGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: FTGPCTSPKRHT*DGQTQCGMESP Trigger: GGGACTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTACATGGTCCAGTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAAGAGCCCCTTTAGAGTaGGGGTTCAAGAGAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: VPARNATLGMARPSVEWRRAPLE*GFKRNH Trigger: GTGGTTTCTCTTGAACCCCAACTCTAAAGGGGCTCT...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTACATTCCAGCCCACTTCAGTTaGAGATCCCTGTCTCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: PHEQMARHLNSASLSQYIPAHFS*RSLSLV Trigger: CACTAGAGACAGGGATCTCAAACTGAAGTGGGCTGG...AATGTACTGTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCACCCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACTACCCTGTAGTCTACTaGTGGTTGTTTTGGTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: SPTPTSRWRVISTLPHFHYPVVY*WLFWCL Trigger: CAAACACCAAAACAACCACAAGTAGACTACAGGGTA...GTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGGGTGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | CATGTCGAATGGGGGAATGGCACTGGCTTTGGTGACATGAAAGTTGATCTTGAGAGGAGAGGCTGGCCCTaGGGAGCTAAAATGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: HVEWGNGTGFGDMKVDLERRGWP*GAKMLS Trigger: TGACAGCATTTTAGCTCCCAAGGGCCAGCCTCTCCT...CTCAAGATCAACTTTCATGTCACCAAAGCCAGTGCCATTCCCCCATTCGACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTAGTCTACTTGTGGTaGTTTTGGTGTTTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: QGYCVKARPGRVVCAFSSVVYLW*FWCLRQ Trigger: CTGTCTCAAACACCAAAACAACCACAAGTAGACTAC...GGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTACATTCTACTTGTGGTTGTTTaGGTGTTTGAGACAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: PHEQMARHLNSASLSQYILLVVV*VFETVS Trigger: AGACACTGTCTCAAACACCAAAACAACCACAAGTAG...AATGTACTGTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR TCA 72 bp | AGAGCCCCTTTAGAGTTGGGGTTCAAGAGAAACCACTaGAAGGCTAAGATAAGAAGAGCTGTAGTGCCGGGT | + |
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Preference number: 3 (lower is better) Translates to: RAPLELGFKRNH*KAKIRRAVVPG Trigger: ACCCGGCACTACAGCTCTTCTTATCTTAGCCTTTCAGTGGTTTCTCTTGAACCCCAACTCTAAAGGGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| 3UTR CCA 72 bp | GGGTCTGGGTATGAGAGCACCATGAGACTGGGGCTGTaGTTTTTGCATAGATCTTTGGGATTTGTTAAATCA | + |
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Preference number: 3 (lower is better) Translates to: GSGYESTMRLGL*FLHRSLGFVKS Trigger: TGATTTAACAAATCCCAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | GGACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTGAGGGTCAGGGGCCCTaGCAGGGCACAGATGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQPGLLCQSQTRQGGVCLEGQGP*QGTDGS Trigger: GCTGCCATCTGTGCCCTGCCAGGGCCCCTGACCCTC...AAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR TCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGCGGCGGGAGCTGAAGTaGAGGGCCAAGAGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: YQPETPHLGWPDPVWNGERRELK*RAKRRG Trigger: TCCCCTCCTCTTGGCCCTTCACTTCAGCTCCCGCCG...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR TCA 90 bp | GGACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTGGGGTCGGCGGGAGCTaGAGTGAAGGGCCAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQPGLLCQSQTRQGGVCLGVGGS*SEGPRG Trigger: TCCTCTTGGCCCTTCACTTCAGCTCCCGCCGACCCC...AAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | CAGGATGACACAGTCAGGCCCAGCCTGAACACCACTTTTCCCTTCAAGCCCCACGCTGGCTGGAGGACTTaGGGGGCTTCCCAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QDDTVRPSLNTTFPFKPHAGWRT*GASQPA Trigger: GGCTGGCTGGGAAGCCCCCCAAGTCCTCCAGCCAGC...GTGGGGCTTGAAGGGAAAAGTGGTGTTCAGGCTGGGCCTGACTGTGTCATCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | CACGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGGTCCCTTCTCGCCCCTaGCCTCCCCATTCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HAFSPSTREAEAGRFLSSVPSRP*PPHSLH Trigger: GTGGAGTGAATGGGGAGGGCAGGGGCGAGAAGGGAC...CGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAAAGGCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | GGACAGCCAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTGCCAGCCGGTCTTTGTaGCTCCGGCTGCTCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQPGLLCQSQTRQGGVCLASRSL*LRLLMC Trigger: GCACATGAGCAGCCGGAGGCACAAAGACCGGCTGGC...AAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTGGCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGAGATGGCAGCAGCTGTaGTGGGCAGCGGACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YQPETPHLGWPDPVWNGERWQQL*WAADQA Trigger: TGCCTGGTCCGCTGCCCACCACAGCTGCTGCCATCT...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | GACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTTAAGAGGCAGAGGCAGTGGCTCAGGCCCTGGTaGTTCCCTGCTGGGATCCGG | + |
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Preference number: 4 (lower is better) Translates to: DQAGWCVPLVPLLKRQRQWLRPW*FPAGIR Trigger: CCGGATCCCAGCAGGGAAGCACCAGGGCCTGAGCCA...CTGCCTCTGCCTCTTAAGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | TGGATCCTGGTGAAATCCCATGTCGAATGGGGGAATGGCACTGGCTTTGGTGACTCCCACGGCCCCTTCTaGTGGCTCAGGCCCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: WILVKSHVEWGNGTGFGDSHGPF*WLRPWC Trigger: GCACCAGGGCCTGAGCCAGCAGAAGGGGCCGTGGGA...GTCACCAAAGCCAGTGCCATTCCCCCATTCGACATGGGATTTCACCAGGATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGAAGAGGGTAGCAGCTaGTGTTGCAGCAGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPARNATLGMARPSVEWREEGSS*CCSRPE Trigger: CTCCGGCCTGCTGCAACAGCAGCTGCTACCCTCTTC...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | AGCCCCACCCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGGGCGGACAGCTCCTaGTGGAGAACGAAACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPTPTSRWRVISTLPHFHRADSS*WRTKQS Trigger: GCTCTGTTTCGTTCTCCAGCAGGAGCTGTCCGCCCT...GTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGGGTGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | CAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCTGGCAGCAGCTGTGGTaGGCAGCGGACCAGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QGYCVKARPGRVVCAFSSWQQLW*AADQAG Trigger: TCCTGCCTGGTCCGCTGCCCACCACAGCTGCTGCCA...GGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGGGTTTCGAGGCCTCTaGTTGCTCTTGGCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VPARNATLGMARPSVEWRGFRGL*LLLAAS Trigger: GGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCC...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGCTCCGGCTGCTCATGTaGTGCTTGAGCTGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YQPETPHLGWPDPVWNGELRLLM*CLSWVS Trigger: AGAGACCCAGCTCAAGCAGCACATGAGCAGCCGGAG...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | TATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTAGGCCAACAAGGGGCTaGGGGAGCCGGAGGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: YCVKARPGRVVCAFSSVTRPTRG*GSRRPD Trigger: GTCCGGCCTCCGGCTCCCCCAGCCCCTTGTTGGCCT...AGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CCA 90 bp | AGCCCCACCCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACCTGATGACAGCTTTCTaGACTGGGTCCATCGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPTPTSRWRVISTLPHFHLMTAF*TGSIVL Trigger: CAGCACGATGGACCCAGTCCAGAAAGCTGTCATCAG...GTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGGGTGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR TCA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGACAGCTTCCACAGCCTTaGGTTTTCTGGCGTGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPARNATLGMARPSVEWRQLPQP*VFWRVC Trigger: ACAGACACGCCAGAAAACTCAAGGCTGTGGAAGCTG...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR GCA 90 bp | CCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTACATTGGGATGCAGGACCTTTaGTCTGAGGGGTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHEQMARHLNSASLSQYIGMQDL*SEGFQG Trigger: GCCCTGGAACCCCTCAGAGCAAAGGTCCTGCATCCC...AATGTACTGTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | CATGTCGAATGGGGGAATGGCACTGGCTTTGGTGACATGAAAGTTGATCTTGAGGGAGGGCTGGGTCCCTaGCGGCCCCCACGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVEWGNGTGFGDMKVDLEGGLGP*RPPRFP Trigger: AGGAAATCGTGGGGGCCGGCAGGGACCCAGCCCTCC...CTCAAGATCAACTTTCATGTCACCAAAGCCAGTGCCATTCCCCCATTCGACATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCCACCCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTGCTGTGTGCTTCTaGAGCTTGTTATGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPTPTSRWRVISTLPHFHSAVCF*SLLCWL Trigger: CAGCCAGCATAACAAGCTGCAGAAGCACACAGCACT...GTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGGGTGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | GACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTTAAGAGGCAGAGGCAGTTCCAGGGCTTCCACTaGCTGGAGGTGAGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQAGWCVPLVPLLKRQRQFQGFH*LEVRLK Trigger: CTTCAGCCTCACCTCCAGCCAGTGGAAGCCCTGGAA...CTGCCTCTGCCTCTTAAGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | GACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTTAAGAGGCAGAGGCAGGCGGACAGCTCCTGCTaGAGAACGAAACAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQAGWCVPLVPLLKRQRQADSSC*RTKQSW Trigger: CCAGCTCTGTTTCGTTCTCCAGCAGGAGCTGTCCGC...CTGCCTCTGCCTCTTAAGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | GTTTACTGGACCATGTACCAGCCCGAAACGCCACACTaGGGATGGCCAGACCCAGTGTGGAATGGAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYWTMYQPETPH*GWPDPVWNGES Trigger: GGACTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTACATGGTCCAGTAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGCTGGGTCTCTGAATTaGCATGGAGCTGACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGYCVKARPGRVVCAFSSAGSLN*HGADRG Trigger: CCCTCTGTCAGCTCCATGTCAATTCAGAGACCCAGC...GGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR TCA 90 bp | CCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTACATTCTGCCAGCGTCTTGGTaGGTTGCTTCTGCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHEQMARHLNSASLSQYILPASW*VASARP Trigger: TGGCCTTGCAGAAGCAACTCACCAAGACGCTGGCAG...AATGTACTGTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGCAGTCTCTGTGGGATGTGGAGACAAGTGTCTGACTGGAAGAGATAGGTGCTGGCTCAGGCCCTaGTGCTTCCCTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QKAVSVGCGDKCLTGRDRCWLRP*CFPAGI Trigger: GATCCCAGCAGGGAAGCACCAGGGCCTGAGCCAGCA...CCTATCTCTTCCAGTCAGACACTTGTCTCCACATCCCACAGAGACTGCCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGCAGTCTCTGTGGGATGTGGAGACAAGTGTCTGACTGGAAGAGATAGGCTGGCAGGGCACAGATaGCAGCAGCTGTGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKAVSVGCGDKCLTGRDRLAGHR*QQLWWA Trigger: TGCCCACCACAGCTGCTGCCATCTGTGCCCTGCCAG...CCTATCTCTTCCAGTCAGACACTTGTCTCCACATCCCACAGAGACTGCCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | CAGGATGACACAGTCAGGCCCAGCCTGAACACCACTTTTCCCTTCAAGCCCCACGACAGCTTTCTGGACTaGGTCCATCGTGCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDDTVRPSLNTTFPFKPHDSFLD*VHRAEV Trigger: AACTTCAGCACGATGGACCCAGTCCAGAAAGCTGTC...GTGGGGCTTGAAGGGAAAAGTGGTGTTCAGGCTGGGCCTGACTGTGTCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGTTCCTATCACTCTCTTaGTCTTGTGTCCAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YQPETPHLGWPDPVWNGEFLSLS*SCVQSL Trigger: GAGGGACTGGACACAAGACCAAGAGAGTGATAGGAA...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTATGAGAGCACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGGCCCAGGACAGGAGCTaGGAAGAGGGTAGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGYESTMRLGLWFLHRSLAQDRS*EEGSSC Trigger: GCAGCTGCTACCCTCTTCCCAGCTCCTGTCCTGGGC...CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | TATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTTGGAAGGCGAGCAAATaGTTCAGGTCCAGCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YCVKARPGRVVCAFSSVTWKASK*FRSSGG Trigger: ACCCCCGCTGGACCTGAAGCATTTGCTCGCCTTCCA...AGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGCAGTCTCTGTGGGATGTGGAGACAAGTGTCTGACTGGAAGAGATAGGGCCAAGAGGAGGGGATaGAGGACCTTTGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKAVSVGCGDKCLTGRDRAKRRG*RTFALR Trigger: CCTCAGAGCAAAGGTCCTGCATCCCCTCCTCTTGGC...CCTATCTCTTCCAGTCAGACACTTGTCTCCACATCCCACAGAGACTGCCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGAGCGTCTTGGTGAGTTaGTTCTGCAAGGCCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YQPETPHLGWPDPVWNGESVLVS*FCKANL Trigger: TAAATTGGCCTTGCAGAAGCAACTCACCAAGACGCT...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTAGGTCCAGCGGGGGTTaGAGAGGCCGGGCGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFRSSGG*RGRAGK Trigger: TTTGCCCGCCCGGCCTCTGCAACCCCCGCTGGACCT...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | CAAACTGACTTTGAACTCGTAATCCAGGCCCTAGGATaGCAGGAATGCACCACCATACCTGGCTACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTDFELVIQALG*QECTTIPGYPM Trigger: CATGGGGTAGCCAGGTATGGTGGTGCATTCCTGCAATCCTAGGGCCTGGATTACGAGTTCAAAGTCAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGCAGTCTCTGTGGGATGTGGAGACAAGTGTCTGACTGGAAGAGATAGGAACACTCACAGCCAGTaGTGTGTGCTTCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKAVSVGCGDKCLTGRDRNTHSQ*CVLLQL Trigger: AAGCTGCAGAAGCACACAGCACTGGCTGTGAGTGTT...CCTATCTCTTCCAGTCAGACACTTGTCTCCACATCCCACAGAGACTGCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTATGAGAGCACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGGTGGTGCCATTGAGGTaGAAGGCGAGCAAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGYESTMRLGLWFLHRSLVVPLR*KASKCF Trigger: GAAGCATTTGCTCGCCTTCCACCTCAATGGCACCAC...CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR TCA 90 bp | TATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTGAGTTGAACCGCAGATaGCAGATGTTACAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YCVKARPGRVVCAFSSVTELNRR*QMLQEM Trigger: CATCTCCTGTAACATCTGTCATCTGCGGTTCAACTC...AGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTAGGCAGGAAGCGGGCTaGCAGCGTCTTGGTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFRQEAG*QRLGEL Trigger: CAACTCACCAAGACGCTGGCAGCCCGCTTCCTGCCT...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTAAAAAGGATGGGTCCTaGAGCAGGGCGGACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFKKDGS*SRADSS Trigger: GGAGCTGTCCGCCCTGCTGCAGGACCCATCCTTTTT...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTTTCTGCAGCTTGTTATaGTGGCTGGAGGACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFFCSLL*WLEDLG Trigger: CCCCAAGTCCTCCAGCCAGCATAACAAGCTGCAGAA...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGTATGAGAGCACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGTTGGTGAGTTGCTTCTaGAAGGCCAATTTAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGYESTMRLGLWFLHRSLLVSCF*KANLDL Trigger: CAAGTCTAAATTGGCCTTGCAGAAGCAACTCACCAA...CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR TCA 90 bp | ACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGGGATTTGTTAAATCACTTGAGCTGGGTCTCTaGATTGACATGGAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TMRLGLWFLHRSLGFVKSLELGL*IDMELT Trigger: TGTCAGCTCCATGTCAATTCAGAGACCCAGCTCAAG...TGATTTAACAAATCCCAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | GCCCTTTGCCATACATACCCTGTAGTCTACTTGTGGTaGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALCHTYPVVYLW*FWCLRQCLAIW Trigger: CCATATAGCTAGACACTGTCTCAAACACCAAAACAACCACAAGTAGACTACAGGGTATGTATGGCAAAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTATGTGCTGCTTGAGCTaGGTCTCTGAATTGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFMCCLS*VSELTW Trigger: CCATGTCAATTCAGAGACCCAGCTCAAGCAGCACAT...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | TTTAAGAACTTTGGGGCCTCTTATCTCTATGGCCCTTaGCCATACATACCCTGTAGTCTACTTGTGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKNFGASYLYGP*PYIPCSLLVVV Trigger: AACAACCACAAGTAGACTACAGGGTATGTATGGCAAAGGGCCATAGAGATAAGAGGCCCCAAAGTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | ACATACCCTGTAGTCTACTTGTGGTTGTTTTGGTGTTaGAGACAGTGTCTAGCTATATGGCTCAAACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TYPVVYLWLFWC*RQCLAIWLKLT Trigger: AGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCACAAGTAGACTACAGGGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| 3UTR CAA 72 bp | TTGCCATACATACCCTGTAGTCTACTTGTGGTTGTTTaGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPYIPCSLLVVV*VFETVSSYMAQ Trigger: TTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCACAAGTAGACTACAGGGTATGTATGGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR TCA 90 bp | GTGGTTGTTTTGGTGTTTGAGACAGTGTCTAGCTATATGGCTCAAACTGACTTTAGATGTTACAGGAGATaGACAGCTTCTTCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVVLVFETVSSYMAQTDFRCYRR*TASSSE Trigger: CTCTGAAGAAGAAGCTGTTCATCTCCTGTAACATCT...AAAGTCAGTTTGAGCCATATAGCTAGACACTGTCTCAAACACCAAAACAACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS GCA 90 bp | CCGGAGGCCGGACCTGGCCCCGTGGAGGTCTTGCCCAGGCTGAGCTaGCGAAGCCTTCGCTGGTGGGCGCGTCCCCCACAATGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PEAGPGPVEVLPRLS*RSLRWWARPPQCTW Trigger: CCAGGTGCATTGTGGGGGACGCGCCCACCAGCGAAGGCTTCGGCAGCTCAGCCTGGGCAAGACCTCCACGGGGCCAGGTCCGGCCTCCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151589.2 |
||
| CDS GCA 90 bp | CCATTGAGGTGGAAGGCGAGCAAATGCTTCAGGTCCAGCGGGGGTTaGAGAGGCCGGGCGGGCAAAGTCAGGGAGGCCAACAAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLRWKASKCFRSSGG*RGRAGKVREANKGL Trigger: CAGCCCCTTGTTGGCCTCCCTGACTTTGCCCGCCCGGCCTCTGCAACCCCCGCTGGACCTGAAGCATTTGCTCGCCTTCCACCTCAATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
||
| CDS CCA 90 bp | CAGGAAGAGGAGGAAGACGAAGCAGCAGCATCACAAAGTTCGGAGTaGACGGGGTCTCCGGCTGAGTGGACGGGGTCTCCGGCTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QEEEEDEAAASQSSE*TGSPAEWTGSPADG Trigger: CCCATCAGCCGGAGACCCCGTCCACTCAGCCGGAGACCCCGTCCACTCCGAACTTTGTGATGCTGCTGCTTCGTCTTCCTCCTCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS CCA 90 bp | GAGGGGATGCAGGACCTTTGCTCTGAGGGGTTCCAGGGCTTCCACTaGCTGGAGGTGAGGCTGAAGACACCACTGTCCCGTTTGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGMQDLCSEGFQGFH*LEVRLKTPLSRLWS Trigger: CGACCACAAACGGGACAGTGGTGTCTTCAGCCTCACCTCCAGCCAGTGGAAGCCCTGGAACCCCTCAGAGCAAAGGTCCTGCATCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGCCCACTTCAGTTTGAGATCCCTGTCTCTAGTGATTGTCCAGACCGCTCAGGTCCAGCGGGGGTaGCAGAGGCCGGGCGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPAHFSLRSLSLVIVQTAQVQRG*QRPGGQ Trigger: TTGCCCGCCCGGCCTCTGCAACCCCCGCTGGACCTG...AGCGGTCTGGACAATCACTAGAGACAGGGATCTCAAACTGAAGTGGGCTGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS TCA 90 bp | CTGCTCATGTGCTGCTTGAGCTGGGTCTCTGAATTGACATGGAGCTaGCAGAGGGCACAATGGAAAGGAGGGCTGGGTCCCTGCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLMCCLSWVSELTWS*QRAQWKGGLGPCRP Trigger: GGGCCGGCAGGGACCCAGCCCTCCTTTCCATTGTGCCCTCTGTCAGCTCCATGTCAATTCAGAGACCCAGCTCAAGCAGCACATGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CAA 90 bp | GTACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAAGCGGGGTGGTGCCATaGAGGTGGAAGGCGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPARNATLGMARPSVEWRSGVVP*RWKASK Trigger: TTTGCTCGCCTTCCACCTCAATGGCACCACCCCGCT...TCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS CCA 90 bp | TTCCACTGGCTGGAGGTGAGGCTGAAGACACCACTGTCCCGTTTGTaGTCGGGTTTCGAGGCCTCTGCTTGCTCTTGGCAGCTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FHWLEVRLKTPLSRL*SGFEASACSWQLPQ Trigger: CTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGTGTCTTCAGCCTCACCTCCAGCCAGTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
||
| CDS GCA 90 bp | GGCAGCGGACCAGGCAGGAAGCGGGCTGCCAGCGTCTTGGTGAGTTaGTTCTGCAAGGCCAATTTAGACTTGAGAACACTCACAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSGPGRKRAASVLVS*FCKANLDLRTLTAS Trigger: ACTGGCTGTGAGTGTTCTCAAGTCTAAATTGGCCTTGCAGAAGCAACTCACCAAGACGCTGGCAGCCCGCTTCCTGCCTGGTCCGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CAA 90 bp | CACGCCTTTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGTTTCGAGGCCTCTGCTaGCTCTTGGCAGCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HAFSPSTREAEAGRFLSSFRGLC*LLAAST Trigger: TGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAA...CGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAAAGGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS TCA 90 bp | TCGGGTTTCGAGGCCTCTGCTTGCTCTTGGCAGCTTCCACAGCCTTaGGTTTTCTGGCGTGTCTGTGGCCCTTGTAATGAGCCTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGFEASACSWQLPQP*VFWRVCGPCNEPQP Trigger: AGGCTGAGGCTCATTACAAGGGCCACAGACACGCCAGAAAACTCAAGGCTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
||
| CDS GCA 90 bp | GCTGAAGACACCACTGTCCCGTTTGTGGTCGGGTTTCGAGGCCTCTaGTTGCTCTTGGCAGCTTCCACAGCCTTGAGTTTTCTGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEDTTVPFVVGFRGL*LLLAASTALSFLAC Trigger: ACACGCCAGAAAACTCAAGGCTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGTGTCTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCTCCATCGTGCTGAAGTaGGGGAAGAGACTGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGYCVKARPGRVVCAFSSSIVLK*GKRLSG Trigger: CCCGCTCAGTCTCTTCCCCAACTTCAGCACGATGGA...GGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATAGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
||
| CDS-3UTR CAA 90 bp | TACCAGCCCGAAACGCCACACTTGGGATGGCCAGACCCAGTGTGGAATGGAGAGCAGCGTCTTGGTGAGTaGCTTCTGCAAGGCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: YQPETPHLGWPDPVWNGEQRLGE*LLQGQF Trigger: AAATTGGCCTTGCAGAAGCAACTCACCAAGACGCTG...CTCTCCATTCCACACTGGGTCTGGCCATCCCAAGTGTGGCGTTTCGGGCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CAA 90 bp | GTTCCAGCCCACTTCAGTTTGAGATCCCTGTCTCTAGTGATTGTCCAGACCGCTCGGGCTGCCAGCGTCTaGGTGAGTTGCTTCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: VPAHFSLRSLSLVIVQTARAASV*VSCFCK Trigger: CTTGCAGAAGCAACTCACCAAGACGCTGGCAGCCCG...AGCGGTCTGGACAATCACTAGAGACAGGGATCTCAAACTGAAGTGGGCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CAA 90 bp | CCCCACGAGCAGATGGCGCGTCATCTCAACTCTGCCTCACTTTCACAGTACATTGCAGCTTCCACAGCCTaGAGTTTTCTGGCGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PHEQMARHLNSASLSQYIAASTA*SFLACL Trigger: CAGACACGCCAGAAAACTCAAGGCTGTGGAAGCTGC...AATGTACTGTGAAAGTGAGGCAGAGTTGAGATGACGCGCCATCTGCTCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CAA 90 bp | TGCACCACCATACCTGGCTACCCCATGGTAAATATGCCTGATAGGTTCCAGCCCGTGTGCTTCTGCAGCTaGTTATGCTGGCTGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: CTTIPGYPMVNMPDRFQPVCFCS*LCWLED Trigger: GTCCTCCAGCCAGCATAACAAGCTGCAGAAGCACAC...GGGCTGGAACCTATCAGGCATATTTACCATGGGGTAGCCAGGTATGGTGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CAA 90 bp | TCTGGGTATGAGAGCACCATGAGACTGGGGCTGTGGTTTTTGCATAGATCTTTGCCTTCGGGGAGCCCCTaGATGACCTTCCACCATCCA | + |
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Preference number: 5 (lower is better) Translates to: SGYESTMRLGLWFLHRSLPSGSP*MTFHHP Trigger: TGGATGGTGGAAGGTCATCAAGGGGCTCCCCGAAGG...CAAAGATCTATGCAAAAACCACAGCCCCAGTCTCATGGTGCTCTCATACCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS TCA 90 bp | TCTGGCGTGTCTGTGGCCCTTGTAATGAGCCTCAGCCTGGTTCGCTaGGTTGAACCGCAGATGACAGATGTTACAGGAGATGAACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SGVSVALVMSLSLVR*VEPQMTDVTGDEQL Trigger: AAGCTGTTCATCTCCTGTAACATCTGTCATCTGCGGTTCAACTCAGCGAACCAGGCTGAGGCTCATTACAAGGGCCACAGACACGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS-3UTR CAA 90 bp | TATTGTGTCAAAGCCAGACCAGGCAGGGTGGTGTGTGCCTTTAGTTCCGTTACTATCACTCTCTTGGTCTaGTGTCCAGTCCCTCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: YCVKARPGRVVCAFSSVTITLLV*CPVPPR Trigger: CCGAGGAGGGACTGGACACAAGACCAAGAGAGTGAT...AGTAACGGAACTAAAGGCACACACCACCCTGCCTGGTCTGGCTTTGACACAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS-3UTR CAA 90 bp | CAGGATGACACAGTCAGGCCCAGCCTGAACACCACTTTTCCCTTCAAGCCCCACAAGGCCAATTTAGACTaGAGAACACTCACAGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: QDDTVRPSLNTTFPFKPHKANLD*RTLTAS Trigger: ACTGGCTGTGAGTGTTCTCAAGTCTAAATTGGCCTT...GTGGGGCTTGAAGGGAAAAGTGGTGTTCAGGCTGGGCCTGACTGTGTCATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS GCA 72 bp | GGACCTGGCCCCGTGGAGGTCTTGCCCAGGCTGAGCTaGCGAAGCCTTCGCTGGTGGGCGCGTCCCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GPGPVEVLPRLS*RSLRWWARPPQ Trigger: TTGTGGGGGACGCGCCCACCAGCGAAGGCTTCGGCAGCTCAGCCTGGGCAAGACCTCCACGGGGCCAGGTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151589.2 |
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| CDS GCA 72 bp | CCTGCTGGCCCCGTGGAGGTCTTGCCCAGGCTGAGCTaGCGAAGCCTTCGCTGGTGGGCGCGTCCCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: PAGPVEVLPRLS*RSLRWWARPPQ Trigger: TTGTGGGGGACGCGCCCACCAGCGAAGGCTTCGGCAGCTCAGCCTGGGCAAGACCTCCACGGGGCCAGCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153494.2 |
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| CDS GCA 72 bp | CAGGACAGGAGCTGGGAAGAGGGTAGCAGCTGCTGTTaGAGCAGGCCGGAGGGTCAGGGGCCCTGGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: QDRSWEEGSSCC*SRPEGQGPWQG Trigger: GCCCTGCCAGGGCCCCTGACCCTCCGGCCTGCTGCAACAGCAGCTGCTACCCTCTTCCCAGCTCCTGTCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS CCA 72 bp | GTCTTGCCCAGGCTGAGCTGCCGAAGCCTTCGCTGGTaGGCGCGTCCCCCACAATGCACCTGGGCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VLPRLSCRSLRW*ARPPQCTWAWA Trigger: AGCCCAGGCCCAGGTGCATTGTGGGGGACGCGCCCACCAGCGAAGGCTTCGGCAGCTCAGCCTGGGCAAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000151589.2 ENSMUST00000153494.2 |
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| CDS CCA 72 bp | GAGGTCTTGCCCAGGCTGAGCTGCCGAAGCCTTCGCTaGTGGGCGCGTCCCCCACAATGCACCTGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: EVLPRLSCRSLR*WARPPQCTWAW Trigger: CCAGGCCCAGGTGCATTGTGGGGGACGCGCCCACCAGCGAAGGCTTCGGCAGCTCAGCCTGGGCAAGACCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000151589.2 ENSMUST00000153494.2 |
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| CDS CAA 90 bp | GGAGGGCTGGGTCCCTGCCGGCCCCCACGATTTCCTATCACTCTCTaGGTCTTGTGTCCAGTCCCTCCTCGGGACACAGGACGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GGLGPCRPPRFPITL*VLCPVPPRDTGRPR Trigger: CCGGGGCCGTCCTGTGTCCCGAGGAGGGACTGGACACAAGACCAAGAGAGTGATAGGAAATCGTGGGGGCCGGCAGGGACCCAGCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS TCA 72 bp | GAAGGGCCAAGAGGAGGGGATGCAGGACCTTTGCTCTaGGGGGTTCCAGGGCTTCCACTGGCTGGAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EGPRGGDAGPLL*GVPGLPLAGGE Trigger: CTCACCTCCAGCCAGTGGAAGCCCTGGAACCCCTCAGAGCAAAGGTCCTGCATCCCCTCCTCTTGGCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS CCA 72 bp | GAGGAAGACGAAGCAGCAGCATCACAAAGTTCGGAGTaGACGGGGTCTCCGGCTGAGTGGACGGGGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: EEDEAAASQSSE*TGSPAEWTGSP Trigger: CGGAGACCCCGTCCACTCAGCCGGAGACCCCGTCCACTCCGAACTTTGTGATGCTGCTGCTTCGTCTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS CAA 72 bp | TGCCGGCCCCCACGATTTCCTATCACTCTCTTGGTCTaGTGTCCAGTCCCTCCTCGGGACACAGGACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CRPPRFPITLLV*CPVPPRDTGRP Trigger: GGGCCGTCCTGTGTCCCGAGGAGGGACTGGACACAAGACCAAGAGAGTGATAGGAAATCGTGGGGGCCGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS CCA 72 bp | CAGGACCTTTGCTCTGAGGGGTTCCAGGGCTTCCACTaGCTGGAGGTGAGGCTGAAGACACCACTGTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: QDLCSEGFQGFH*LEVRLKTPLSR Trigger: ACGGGACAGTGGTGTCTTCAGCCTCACCTCCAGCCAGTGGAAGCCCTGGAACCCCTCAGAGCAAAGGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS CAA 90 bp | GGCTTCCACTGGCTGGAGGTGAGGCTGAAGACACCACTGTCCCGTTaGTGGTCGGGTTTCGAGGCCTCTGCTTGCTCTTGGCAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GFHWLEVRLKTPLSR*WSGFEASACSWQLP Trigger: TGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGTGTCTTCAGCCTCACCTCCAGCCAGTGGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS CCA 72 bp | CTGGAGGTGAGGCTGAAGACACCACTGTCCCGTTTGTaGTCGGGTTTCGAGGCCTCTGCTTGCTCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LEVRLKTPLSRL*SGFEASACSWQ Trigger: CTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGTGTCTTCAGCCTCACCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS CAA 72 bp | CTGAAGTTGGGGAAGAGACTGAGCGGGGTGGTGCCATaGAGGTGGAAGGCGAGCAAATGCTTCAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LKLGKRLSGVVP*RWKASKCFRSS Trigger: GCTGGACCTGAAGCATTTGCTCGCCTTCCACCTCAATGGCACCACCCCGCTCAGTCTCTTCCCCAACTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS CAA 90 bp | GAAGACACCACTGTCCCGTTTGTGGTCGGGTTTCGAGGCCTCTGCTaGCTCTTGGCAGCTTCCACAGCCTTGAGTTTTCTGGCGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EDTTVPFVVGFRGLC*LLAASTALSFLACL Trigger: CAGACACGCCAGAAAACTCAAGGCTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS TCA 72 bp | TGCTGCTTGAGCTGGGTCTCTGAATTGACATGGAGCTaGCAGAGGGCACAATGGAAAGGAGGGCTGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CCLSWVSELTWS*QRAQWKGGLGP Trigger: GGGACCCAGCCCTCCTTTCCATTGTGCCCTCTGTCAGCTCCATGTCAATTCAGAGACCCAGCTCAAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS TCA 72 bp | GAGGCCTCTGCTTGCTCTTGGCAGCTTCCACAGCCTTaGGTTTTCTGGCGTGTCTGTGGCCCTTGTAATGAG | + |
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Preference number: 6 (lower is better) Translates to: EASACSWQLPQP*VFWRVCGPCNE Trigger: CTCATTACAAGGGCCACAGACACGCCAGAAAACTCAAGGCTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS GCA 72 bp | ACCACTGTCCCGTTTGTGGTCGGGTTTCGAGGCCTCTaGTTGCTCTTGGCAGCTTCCACAGCCTTGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: TTVPFVVGFRGL*LLLAASTALSF Trigger: AAAACTCAAGGCTGTGGAAGCTGCCAAGAGCAAGCAGAGGCCTCGAAACCCGACCACAAACGGGACAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS GCA 72 bp | CCAGGCAGGAAGCGGGCTGCCAGCGTCTTGGTGAGTTaGTTCTGCAAGGCCAATTTAGACTTGAGAACACTC | + |
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Preference number: 6 (lower is better) Translates to: PGRKRAASVLVS*FCKANLDLRTL Trigger: GAGTGTTCTCAAGTCTAAATTGGCCTTGCAGAAGCAACTCACCAAGACGCTGGCAGCCCGCTTCCTGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103119.10 |
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| CDS CCA 72 bp | GAAGGGACCCCAAATGTGTGGCTGATGACAGCTTTCTaGACTGGGTCCATCGTGCTGAAGTTGGGGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: EGTPNVWLMTAF*TGSIVLKLGKR Trigger: TCTCTTCCCCAACTTCAGCACGATGGACCCAGTCCAGAAAGCTGTCATCAGCCACACATTTGGGGTCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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| CDS TCA 72 bp | TCTGTGGCCCTTGTAATGAGCCTCAGCCTGGTTCGCTaGGTTGAACCGCAGATGACAGATGTTACAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SVALVMSLSLVR*VEPQMTDVTGD Trigger: ATCTCCTGTAACATCTGTCATCTGCGGTTCAACTCAGCGAACCAGGCTGAGGCTCATTACAAGGGCCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103119.10 ENSMUST00000151589.2 |
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