Pregenerated sensors for ZFP385B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027016Ensembl transcript IDs: ENSMUST00000090766.12, ENSMUST00000111829.2, ENSMUST00000111830.9, ENSMUST00000111831.8, ENSMUST00000171063.8
Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCTGGAGGTGGGGCTGGGCGGTGGCCTGCACTTTGTGAGTGGGTaGGTGGGGTACTTACAGTCACACACAGGGCTTATACTGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SLEVGLGGGLHFVSG*VGYLQSHTGLILLN Trigger: ATTCAGCAGTATAAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACCTCCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR CCA 90 bp | TTTGTCCCTGGAGGTGGGGCTGGGCGGTGGCCTGCACTTTGTGAGTaGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTATACTGCT | + |
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Preference number: 1 (lower is better) Translates to: FVPGGGAGRWPALCE*VGGVLTVTHRAYTA Trigger: AGCAGTATAAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACCTCCAGGGACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR TCA 90 bp | CTCAGAACTCTGCCTTGCCTTGCAAGGCTGCTTTTAAACACTGCTTaGAACTGCTTCCCAGGACACAACAGGGCTGAGGCACACAATCTT | + |
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Preference number: 1 (lower is better) Translates to: LRTLPCLARLLLNTA*NCFPGHNRAEAHNL Trigger: AAGATTGTGTGCCTCAGCCCTGTTGTGTCCTGGGAAGCAGTTTCAAGCAGTGTTTAAAAGCAGCCTTGCAAGGCAAGGCAGAGTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR GCA 90 bp | AACCGCCATGAGCCGTGGGGAGGATGGTATCCACAATTAAGCACTTaGGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTC | + |
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Preference number: 1 (lower is better) Translates to: NRHEPWGGWYPQLST*DGLLFHTRICPLGF Trigger: GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCATCCTCCCCACGGCTCATGGCGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR CCA 90 bp | ACTCAGCAGATAAAACACTGTGCCCAGGGCTCTAGGGTCAGAAAGTaGACAACTCAGAAAGCAAACCAACTCAGAACTCTGCCTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: TQQIKHCAQGSRVRK*TTQKANQLRTLPCL Trigger: AAGGCAAGGCAGAGTTCTGAGTTGGTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGAGCCCTGGGCACAGTGTTTTATCTGCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR GCA 90 bp | GTGGACAACTCAGAAAGCAAACCAACTCAGAACTCTGCCTTGCCTTaGAAGGCTGCTTTTAAACACTGCTTGAAACTGCTTCCCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: VDNSESKPTQNSALP*KAAFKHCLKLLPRT Trigger: TGTCCTGGGAAGCAGTTTCAAGCAGTGTTTAAAAGCAGCCTTGCAAGGCAAGGCAGAGTTCTGAGTTGGTTTGCTTTCTGAGTTGTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR TCA 90 bp | AAAGGCCATGTGATTCGCCCAAGGTCATCACGTAGTTACGGACAATaGGGAATCGCAGCTGTGAAAACCATGCTGGTGATTATGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: KGHVIRPRSSRSYGQ*GIAAVKTMLVIMKM Trigger: CATCTTCATAATCACCAGCATGGTTTTCACAGCTGCGATTCCTCATTGTCCGTAACTACGTGATGACCTTGGGCGAATCACATGGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR GCA 90 bp | GGTCAAGTTGAATGGGAAGGGAAAGGAAGAGCTGTATGCGATTCTTaGTCAATCAGTGAGAGTCCTAATTATCCCACATCCAGACACTGT | + |
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Preference number: 1 (lower is better) Translates to: GQVEWEGKGRAVCDS*SISESPNYPTSRHC Trigger: ACAGTGTCTGGATGTGGGATAATTAGGACTCTCACTGATTGAGCAAGAATCGCATACAGCTCTTCCTTTCCCTTCCCATTCAACTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR CCA 90 bp | TGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTaGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: CDGLLFHTRICPLGF*SYLQTSEEEPTVQV Trigger: GACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR TCA 90 bp | CAGAGTTATGTAGCATTGTTACCAATGGAAAACAGAAGTTTAAAGTaGAGACCATTATGTAGAAATACACGGATTCACTGTCTTCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: QSYVALLPMENRSLK*RPLCRNTRIHCLLA Trigger: TGCAAGAAGACAGTGAATCCGTGTATTTCTACATAATGGTCTTCACTTTAAACTTCTGTTTTCCATTGGTAACAATGCTACATAACTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| 3UTR CAA 90 bp | TGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTGGCCTCCTTTaGTCCCTGGAGGTGGGGCTGGGCGGTGGCCTGCACTTTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: WRGHRKRRALEPGLL*SLEVGLGGGLHFVS Trigger: ACTCACAAAGTGCAGGCCACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAGGTGGGGCTGGGCGGTaGCCTGCACTTTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRGGAGR*PALCEW Trigger: CCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACC...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCGGTGGGGCTGGGCGGTaGCCTGCACTTTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFGGAGR*PALCEW Trigger: CCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACC...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGCCTCCTTTTGTCCCTaGAGGTGGGGCTGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPASFCP*RWGWAV Trigger: CACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAGGTGGGGCTGGGCGGTaGCCTGCACTTTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EYARLDSGVIYRHPRKSLGGAGR*PALCEW Trigger: CCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACC...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAGCCTCCTTTTGTCCCTaGAGGTGGGGCTGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: EYARLDSGVIYRHPRKSLASFCP*RWGWAV Trigger: CACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGC...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGCCTGCACTTTGTaGGTGGGTGGGTGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPVACTL*VGGWGT Trigger: AGTACCCCACCCACCCACTCACAAAGTGCAGGCCAC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCCTGGAGGTGGGGCTaGGCGGTGGCCTGCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: WYPQLSTCDGLLFHTRICPWRWG*AVACTL Trigger: CAAAGTGCAGGCCACCGCCCAGCCCCACCTCCAGGG...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTTTGGCTGGGGTAGGATaGAGAGGGCACCGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPLAGVG*RGHRKR Trigger: TCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAA...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGTGGCCTGCACTTTGTaGGTGGGTGGGTGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: PQLSTCDGLLFHTRICPLVACTL*VGGWGT Trigger: AGTACCCCACCCACCCACTCACAAAGTGCAGGCCAC...AAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACGGTGGGGCTGGGCGGTaGCCTGCACTTTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: MDFCSTLEYARLDSGVIYGGAGR*PALCEW Trigger: CCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACC...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGCCTCCTTTTGTCCCTaGAGGTGGGGCTGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: WYPQLSTCDGLLFHTRICASFCP*RWGWAV Trigger: CACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGGCCTCCTTTTGTCCCTaGAGGTGGGGCTGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLASFCP*RWGWAV Trigger: CACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGC...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTTTGGCTGGGGTAGGATaGAGAGGGCACCGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PQLSTCDGLLFHTRICPLLAGVG*RGHRKR Trigger: TCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAA...AAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAAATACACCAATTGGCTaGGGTAGGATGGAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRNTPIG*GRMERA Trigger: TGCCCTCTCCATCCTACCCCAGCCAATTGGTGTATT...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGTGGCCTGCACTTTGTaGGTGGGTGGGTGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: WYPQLSTCDGLLFHTRICVACTL*VGGWGT Trigger: AGTACCCCACCCACCCACTCACAAAGTGCAGGCCAC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGCCCAGGGCTCTAGGGTCAGAAAGTGGACAACTCAGAAAGCAAACCAAATCAAGAACGGAGGATaGGAAGAATCACACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: HCAQGSRVRKWTTQKANQIKNGG*EESHRG Trigger: TCCTCTGTGTGATTCTTCTCATCCTCCGTTCTTGAT...TTGGTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGAGCCCTGGGCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR-3UTR TCA 90 bp | TGTACAATCTTTGTGGACATGCCCCTCCTAGTCTCCAGGCCAGGTGCATCAACCCTTGGGATTCTAAAATaGTACTTGGCTGTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CTIFVDMPLLVSRPGASTLGILK*YLAVCG Trigger: ACCACAGACAGCCAAGTATCATTTTAGAATCCCAAG...GGTTGATGCACCTGGCCTGGAGACTAGGAGGGGCATGTCCACAAAGATTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTTTGTGGCCTGCACTTTGTaGGTGGGTGGGTGGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: CRCTEGAKMCNLGSSFCFVACTL*VGGWGT Trigger: AGTACCCCACCCACCCACTCACAAAGTGCAGGCCAC...AAAACAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATAATACACCAATTGGCTaGGGTAGGATGGAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYNTPIG*GRMERA Trigger: TGCCCTCTCCATCCTACCCCAGCCAATTGGTGTATT...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTAATACACCAATTGGCTaGGGTAGGATGGAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QTSEEEPTVQVCQEEILFNTPIG*GRMERA Trigger: TGCCCTCTCCATCCTACCCCAGCCAATTGGTGTATT...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGGGCTCTAGGGTCAGAAAGTGGACAACTCAGAAAGCAAACCAACTCTCAGCTTTCATGCTTTaGCACAGAATGACAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CAQGSRVRKWTTQKANQLSAFML*HRMTKD Trigger: ATCCTTTGTCATTCTGTGCCAAAGCATGAAAGCTGA...GAGTTGGTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGAGCCCTGGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR CAA 90 bp | CGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTaGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: RGRAYCSSLSGRDSI*FLSQIITPWEHTRS Trigger: CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR CAA 90 bp | CCGTGGGGAGGATGGTATCCACAATTAAGCACTTGCGATGGACTTTaGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTA | + |
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Preference number: 2 (lower is better) Translates to: PWGGWYPQLSTCDGL*FHTRICPLGFWSYL Trigger: TAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCATCCTCCCCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTGAATGGGAAGGGAAAGGAAGAGCTGTATGCGATTCTTGCTCAATCAGTTGCTTTGGCACAGAATaGCAAAGGATCTTGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: QVEWEGKGRAVCDSCSISCFGTE*QRILGF Trigger: GAATCCCAAGATCCTTTGTCATTCTGTGCCAAAGCA...ACTGATTGAGCAAGAATCGCATACAGCTCTTCCTTTCCCTTCCCATTCAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCAATACACCAATTGGCTaGGGTAGGATGGAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WYPQLSTCDGLLFHTRICNTPIG*GRMERA Trigger: TGCCCTCTCCATCCTACCCCAGCCAATTGGTGTATT...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGGAGCCGTGGGGAGGATaGTATCCACAATTAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLEPWGG*YPQLST Trigger: AGTGCTTAATTGTGGATACCATCCTCCCCACGGCTC...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCCACATCCAGACACTGTCTAAATGAAGAAATAGAGGTTCTGAAAGGCCATTCTAGGGTCAGAAAGTaGACAACTCAGAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: YPTSRHCLNEEIEVLKGHSRVRK*TTQKAN Trigger: GTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGA...ATGGCCTTTCAGAACCTCTATTTCTTCATTTAGACAGTGTCTGGATGTGGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTTTCCACAATTAAGCACTTaGGATGGACTTTTGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CRCTEGAKMCNLGSSFCFPQLST*DGLLFH Trigger: GTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGG...AAAACAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| 3UTR CCA 72 bp | GGAGGTGGGGCTGGGCGGTGGCCTGCACTTTGTGAGTaGGTGGGTGGGGTACTTACAGTCACACACAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GGGAGRWPALCE*VGGVLTVTHRA Trigger: AGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAGCCCCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR CCA 72 bp | GTGGGGCTGGGCGGTGGCCTGCACTTTGTGAGTGGGTaGGTGGGGTACTTACAGTCACACACAGGGCTTATA | + |
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Preference number: 3 (lower is better) Translates to: VGLGGGLHFVSG*VGYLQSHTGLI Trigger: TATAAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGAGCCTGGCCTCCTTTaGTCCCTGGAGGTGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPEPGLL*SLEVGL Trigger: CAGCCCCACCTCCAGGGACAAAAGGAGGCCAGGCTC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR TCA 72 bp | CTGCCTTGCCTTGCAAGGCTGCTTTTAAACACTGCTTaGAACTGCTTCCCAGGACACAACAGGGCTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCLARLLLNTA*NCFPGHNRAEA Trigger: TGCCTCAGCCCTGTTGTGTCCTGGGAAGCAGTTTCAAGCAGTGTTTAAAAGCAGCCTTGCAAGGCAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR-3UTR CAA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAGGAAGAGACGCGCCCTaGAGCCTGGCCTCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTGRDAP*SLASFC Trigger: ACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCC...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTGGAAGAGACGCGCCCTaGAGCCTGGCCTCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LAMDFCSTLEYARLDSGVGRDAP*SLASFC Trigger: ACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCC...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CCA 72 bp | CCAAGAAACTTAAGTATCTCAAATACACCAATTGGCTaGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGC | + |
|
Preference number: 3 (lower is better) Translates to: PRNLSISNTPIG*GRMERAPEETR Trigger: GCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTGGTGTATTTGAGATACTTAAGTTTCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGGCTCTAGGGTCAGAAAGTGGACAACTCAGAAAGCAAACCAACTCTATGCACCGATGGCCTaGAAACTGTTTCTGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CAQGSRVRKWTTQKANQLYAPMA*KLFLMP Trigger: TGGCATCAGAAACAGTTTCAAGGCCATCGGTGCATA...GAGTTGGTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGAGCCCTGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR GCA 72 bp | GAGCCGTGGGGAGGATGGTATCCACAATTAAGCACTTaGGATGGACTTTTGTTCCACACTAGAATATGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: EPWGGWYPQLST*DGLLFHTRICP Trigger: CGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCATCCTCCCCACGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTTTGAGCCTGGCCTCCTTTaGTCCCTGGAGGTGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRCTEGAKMCNLGSSFCFEPGLL*SLEVGL Trigger: CAGCCCCACCTCCAGGGACAAAAGGAGGCCAGGCTC...AAAACAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACGGAAGAGACGCGCCCTaGAGCCTGGCCTCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHGRDAP*SLASFC Trigger: ACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCC...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR TCA 72 bp | GTGATTCGCCCAAGGTCATCACGTAGTTACGGACAATaGGGAATCGCAGCTGTGAAAACCATGCTGGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: VIRPRSSRSYGQ*GIAAVKTMLVI Trigger: AATCACCAGCATGGTTTTCACAGCTGCGATTCCTCATTGTCCGTAACTACGTGATGACCTTGGGCGAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGGAAGAGACGCGCCCTaGAGCCTGGCCTCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKGRDAP*SLASFC Trigger: ACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCC...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR TCA 72 bp | TGGGGTACTTACAGTCACACACAGGGCTTATACTGCTaGATCCTTTGGGCTTTTCTTCTACACCTTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WGTYSHTQGLYC*ILWAFLLHLPT Trigger: AGTGGGAAGGTGTAGAAGAAAAGCCCAAAGGATTCAGCAGTATAAGCCCTGTGTGTGACTGTAAGTACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CCA 72 bp | CGGAGCAGGACAGGACACAGGTCAGCTTTCATGCTTTaGCACAGAATGACAAAGGATCTTGGGATTCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSRTGHRSAFML*HRMTKDLGILK Trigger: TTTTAGAATCCCAAGATCCTTTGTCATTCTGTGCCAAAGCATGAAAGCTGACCTGTGTCCTGTCCTGCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTATACTGCTGAATCCTTaGGGCTTTTCTTCTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPILLNP*GFSSTP Trigger: AGGTGTAGAAGAAAAGCCCAAAGGATTCAGCAGTAT...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR GCA 72 bp | GAATGGGAAGGGAAAGGAAGAGCTGTATGCGATTCTTaGTCAATCAGTGAGAGTCCTAATTATCCCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: EWEGKGRAVCDS*SISESPNYPTS Trigger: GGATGTGGGATAATTAGGACTCTCACTGATTGAGCAAGAATCGCATACAGCTCTTCCTTTCCCTTCCCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR GCA 72 bp | TCAGAAAGCAAACCAACTCAGAACTCTGCCTTGCCTTaGAAGGCTGCTTTTAAACACTGCTTGAAACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SESKPTQNSALP*KAAFKHCLKLL Trigger: AAGCAGTTTCAAGCAGTGTTTAAAAGCAGCCTTGCAAGGCAAGGCAGAGTTCTGAGTTGGTTTGCTTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR CCA 72 bp | CTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTaGAGTTATTTACAGACATCCGAGGAAGAGCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LLFHTRICPLGF*SYLQTSEEEPT Trigger: AGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCATACTGCTGAATCCTTaGGGCTTTTCTTCTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: DSGVIYRHPRKSLLFKSVILLNP*GFSSTP Trigger: AGGTGTAGAAGAAAAGCCCAAAGGATTCAGCAGTAT...GACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR TCA 72 bp | TGGCTGTCTGTGGTTCTAAAAATCAAGAACGGAGGATaGGAAGAATCACACAGAGGAAAAGTACGATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLSVVLKIKNGG*EESHRGKVRSA Trigger: TGCTGATCGTACTTTTCCTCTGTGTGATTCTTCTCATCCTCCGTTCTTGATTTTTAGAACCACAGACAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTCCATACTGCTGAATCCTTaGGGCTTTTCTTCTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: LRHGNTQGRFSFSDQYISILLNP*GFSSTP Trigger: AGGTGTAGAAGAAAAGCCCAAAGGATTCAGCAGTAT...GGAAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR TCA 72 bp | GTAGCATTGTTACCAATGGAAAACAGAAGTTTAAAGTaGAGACCATTATGTAGAAATACACGGATTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VALLPMENRSLK*RPLCRNTRIHC Trigger: ACAGTGAATCCGTGTATTTCTACATAATGGTCTTCACTTTAAACTTCTGTTTTCCATTGGTAACAATGCTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| 3UTR GCA 72 bp | AAGTTTAATCAAAATAAAGTGCATGGTGATATTGCATaGATAGTAGCTAGTCCGTGCATAATTTCCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KFNQNKVHGDIA*IVASPCIISKR Trigger: TCTCTTGGAAATTATGCACGGACTAGCTACTATGCATGCAATATCACCATGCACTTTATTTTGATTAAACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR CAA 72 bp | CACCGGAAGAGACGCGCCCTTGAGCCTGGCCTCCTTTaGTCCCTGGAGGTGGGGCTGGGCGGTGGCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRKRRALEPGLL*SLEVGLGGGLH Trigger: GTGCAGGCCACCGCCCAGCCCCACCTCCAGGGACAAAAGGAGGCCAGGCTCAAGGGCGCGTCTCTTCCGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTGCCCTGGACCGGGGGTaGGGGCTGGCCATCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLALDRG*GLAIAQ Trigger: CTGAGCGATGGCCAGCCCCCACCCCCGGTCCAGGGC...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGCCTGTCGCGGGCTCTGGGTGGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAFLLHLPTGLACRGLWVASFGA*GLTGTG Trigger: ACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGC...CACCCAGAGCCCGCGACAGGCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCATGGTAAGGCAGTGGCTCTTGGGCTGTCACTGAAGCAGAGCATGGTAACCGGGGGTGGGGGCTaGCCATCGCTCAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEHGKAVALGLSLKQSMVTGGGG*PSLSCL Trigger: CAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGT...TACCATGCTCTGCTTCAGTGACAGCCCAAGAGCCACTGCCTTACCATGCTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR CCA 90 bp | TGTACAATCTTTGTGGACATGCCCCTCCTAGTCTCCAGGCCAGGTGCATCAACCAGTGGCACTGAGCCCTaGACCGGGGGTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTIFVDMPLLVSRPGASTSGTEP*TGGGGW Trigger: CCAGCCCCCACCCCCGGTCCAGGGCTCAGTGCCACT...GGTTGATGCACCTGGCCTGGAGACTAGGAGGGGCATGTCCACAAAGATTGTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGCCTGTCGCGGGCTCTGGGTGAGCGATGGCTCCAAGTaGCAGGGGTGTTGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAFLLHLPTGLACRGLWVSDGSK*QGCCAR Trigger: TCTGGCACAACACCCCTGCCACTTGGAGCCATCGCT...CACCCAGAGCCCGCGACAGGCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTAAGGGGCAAAGAGGATaGAGGCGGGCGTGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLKGQRG*RRAWPG Trigger: TCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTT...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCGGTGGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGGLHFVSGWVGYLQSHLERRL*SWREKR Trigger: TCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAG...GTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCAGACAGACAAGGTGACTGTTTTCAGGAACTGTAGACGAAGCTTGGAGAGCCAGCAGTGGCACTaGGCCCTGGACCGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRQTDKVTVFRNCRRSLESQQWH*ALDRGW Trigger: CCACCCCCGGTCCAGGGCTCAGTGCCACTGCTGGCT...CTCCAAGCTTCGTCTACAGTTCCTGAAAACAGTCACCTTGTCTGTCTGCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAGTGGCACTGAGCCCTaGACCGGGGGTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFSGTEP*TGGGGW Trigger: CCAGCCCCCACCCCCGGTCCAGGGCTCAGTGCCACT...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | CAATTGGCTGGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTAGCCTGAGGGCTGACTaGAACTGGTGGCTTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLAGVGWRGHRKRRALEPSLRAD*NWWLLS Trigger: AGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCT...AGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLRRLCS*REKRWL Trigger: GAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCG...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGAATGGGAAGGGAAAGGAAGAGCTGTATGCGATTCTTGCTCAATCAGTGCCCTGGACCGGGGGTaGGGGCTGGCCATCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVEWEGKGRAVCDSCSISALDRG*GLAIAQ Trigger: CTGAGCGATGGCCAGCCCCCACCCCCGGTCCAGGGC...ACTGATTGAGCAAGAATCGCATACAGCTCTTCCTTTCCCTTCCCATTCAACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR TCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATAGCCAGCAGTGGCACTaGGCCCTGGACCGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYSQQWH*ALDRGW Trigger: CCACCCCCGGTCCAGGGCTCAGTGCCACTGCTGGCT...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR TCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATTGCGGCCGCCAGGGGTaGAGACAGGAACGTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNCGRQG*RQERRG Trigger: GCCCCTACGTTCCTGTCTTCACCCCTGGCGGCCGCA...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAGCTGCATCATCAGGGTaGGTGTGCGCACGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRAASSG*VCARGQ Trigger: CTGCCCTCGTGCGCACACCCACCCTGATGATGCAGC...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGCCTGTCGCGGGCTCTGGGTGCATTGTGTTAAAGTTTaGAAAGAGCCCCACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAFLLHLPTGLACRGLWVHCVKV*KEPHGR Trigger: TCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATG...CACCCAGAGCCCGCGACAGGCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGAGCATGGTGAGGCAGTGACTCTTGAGCTGTCACTGAAGCAGAGCATGTCTTCTTCTCCTTGCTaGACTGGTCCCCAGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAEHGEAVTLELSLKQSMSSSPC*TGPQAC Trigger: ACAGGCCTGGGGACCAGTTCAGCAAGGAGAAGAAGA...CATGCTCTGCTTCAGTGACAGCTCAAGAGTCACTGCCTCACCATGCTCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPASFGA*GLTGTG Trigger: ACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGCCTGTCGCGGGCTCTGGGTGTTTATGCCTTCGGCTTaGAATGTGCTGTTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WAFLLHLPTGLACRGLWVFMPSA*NVLFEL Trigger: CAACTCAAACAGCACATTTCAAGCCGAAGGCATAAA...CACCCAGAGCCCGCGACAGGCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCTGCGGCCGCCAGGGGTaGAGACAGGAACGTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSGVIYRHPRKSLLFKSVCGRQG*RQERRG Trigger: GCCCCTACGTTCCTGTCTTCACCCCTGGCGGCCGCA...GACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTGCGGCCGCCAGGGGTaGAGACAGGAACGTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYCGRQG*RQERRG Trigger: GCCCCTACGTTCCTGTCTTCACCCCTGGCGGCCGCA...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGCCGAGGTGGCAGTaGCAGCGCAGAGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTCDGLLFHTRICPLGFWPRWQ*QRRGHG Trigger: GCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCA...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTTGGCCGAGGTGGCAGTaGCAGCGCAGAGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQLSTCDGLLFHTRICPLWPRWQ*QRRGHG Trigger: GCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCA...AAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGCCCTGGACCGGGGGTaGGGGCTGGCCATCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICALDRG*GLAIAQ Trigger: CTGAGCGATGGCCAGCCCCCACCCCCGGTCCAGGGC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATGCGCTGCCTGTGCTaGTGTTCGGGCCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVMRCLC*CSGQAQ Trigger: CTGGGCCTGGCCCGAACACCAGCACAGGCAGCGCAT...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | CAATTGGCTGGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTGAGACTCCAAATGTGTaGTTAATGACTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAGVGWRGHRKRRALEPETPNV*LMTAFC Trigger: GCAGAAAGCAGTCATTAACCACACATTTGGAGTCTC...AGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGCGGTGGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACGAGTTAAAGCGAAGCTaGCAGACGTTACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LGGGLHFVSGWVGYLQSHELKRS*QTLQEI Trigger: TATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTC...GTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLASFGA*GLTGTG Trigger: ACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGC...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CAATTGGCTGGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTAGTTTAGCTGGATGTTaGACACTTCACAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLAGVGWRGHRKRRALEPSLAGC*TLHKRR Trigger: TCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACT...AGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR GCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFLERRL*SWREKR Trigger: TCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAG...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACAGTGGCACTGAGCCCTaGACCGGGGGTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDFCSTLEYARLDSGVIYSGTEP*TGGGGW Trigger: CCAGCCCCCACCCCCGGTCCAGGGCTCAGTGCCACT...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLPLRCP*KEPFWV Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTAGGGCTGACTGGAACTaGTGGCTTTTATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLRADWN*WLLSSL Trigger: AAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCT...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATGGGATGGCTGCAGCCTaGAACAGAGAGGCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNGMAAA*NREADG Trigger: GCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCC...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTGGGATGGCTGCAGCCTaGAACAGAGAGGCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVGMAAA*NREADG Trigger: GCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCC...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | ATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGCAGCGCAGGAGGGATaGCTGCAGCCTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICPLGFWSYLQTSEEEPTAAQEG*LQPGTE Trigger: CTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGC...AGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATGCAGCGCAGGAGGGATaGCTGCAGCCTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNAAQEG*LQPGTE Trigger: CTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGC...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTAAGGGGCAAAGAGGATaGAGGCGGGCGTGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQLSTCDGLLFHTRICPLKGQRG*RRAWPG Trigger: TCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTT...AAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATAAGGGGCAAAGAGGATaGAGGCGGGCGTGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYKGQRG*RRAWPG Trigger: TCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTT...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACTGGCCGAGGTGGCAGTaGCAGCGCAGAGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: MDFCSTLEYARLDSGVIYWPRWQ*QRRGHG Trigger: GCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCA...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACTGGCCGAGGTGGCAGTaGCAGCGCAGAGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHWPRWQ*QRRGHG Trigger: GCCGTGTCCTCTGCGCTGTCACTGCCACCTCGGCCA...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCGGTGGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACTTAATGACTGCTTTCTaGACAGGGTCCATTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGGGLHFVSGWVGYLQSHLMTAF*TGSIVL Trigger: TAACACAATGGACCCTGTGCAGAAAGCAGTCATTAA...GTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR GCA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPLERRL*SWREKR Trigger: TCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAG...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGATGCGCTGCCTGTGCTaGTGTTCGGGCCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSMRCLC*CSGQAQ Trigger: CTGGGCCTGGCCCGAACACCAGCACAGGCAGCGCAT...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
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| CDS-3UTR CCA 90 bp | ATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGGAAGGGTAGTGGTGTaGCATGCGCTGCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICPLGFWSYLQTSEEEPTGRVVV*HALPVL Trigger: CAGCACAGGCAGCGCATGCCACACCACTACCCTTCC...AGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
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| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATGCTGCATCATCAGGGTaGGTGTGCGCACGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYAASSG*VCARGQ Trigger: CTGCCCTCGTGCGCACACCCACCCTGATGATGCAGC...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATTGGAGGGAGAAGCGATaGCTCCAAGTGGCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNWREKR*LQVAGV Trigger: CACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCA...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTATGGAGGGAGAAGCGATaGCTCCAAGTGGCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLWREKR*LQVAGV Trigger: CACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCA...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAATGGAGGGAGAAGCGATaGCTCCAAGTGGCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQWREKR*LQVAGV Trigger: CACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCA...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCGGTGGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACTTCATCAGATCTTTCTaGAATGCAAGCTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGGLHFVSGWVGYLQSHFIRSF*NASFAA Trigger: AGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAA...GTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCCACCGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | ATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ICPLGFWSYLQTSEEEPTLERRL*SWREKR Trigger: TCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAG...AGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTACCGGGGGTGGGGGCTaGCCATCGCTCAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFTGGGG*PSLSCL Trigger: CAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGT...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGGCTGCATCATCAGGGTaGGTGTGCGCACGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSAASSG*VCARGQ Trigger: CTGCCCTCGTGCGCACACCCACCCTGATGATGCAGC...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTAGAGCTACTGTCCACTaGAAAAGACATGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLRATVH*KRHERF Trigger: AAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCT...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGGGCAAAGAGGATaGAGGCGGGCGTGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHKGQRG*RRAWPG Trigger: TCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTT...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATGGAAGGGTAGTGGTGTaGCATGCGCTGCCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYGRVVV*HALPLL Trigger: CAGCAGAGGCAGCGCATGCCACACCACTACCCTTCC...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTTCTTCTTCTCCTTGCTaGACTGGTCCCCAGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVSSSPC*TGPQAC Trigger: ACAGGCCTGGGGACCAGTTCAGCAAGGAGAAGAAGA...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR TCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICASFGA*GLTGTG Trigger: ACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRVLCQI*GERSLL Trigger: AAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACAC...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTTTAGATCCTGTGTTGTaGGCCTCCAGCTGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSLDPVL*ASSCDR Trigger: CCTGTCACAGCTGGAGGCTCACAACACAGGATCTAA...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAATGTCCAGCGAAGGCTaGATCATCAGGGTGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLMSSEG*IIRVGV Trigger: CACACCCACCCTGATGATGCAGCCTTCGCTGGACAT...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CACTGTGCCCAGGGCTCTAGGGTCAGAAAGTGGACAACTCAGAAAGCAAACCAAGCAGCGGAGTTTAGCTaGATGTTGCACACTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HCAQGSRVRKWTTQKANQAAEFS*MLHTSQ Trigger: TTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGC...TTGGTTTGCTTTCTGAGTTGTCCACTTTCTGACCCTAGAGCCCTGGGCACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAGCCTGAGGGCTGACTaGAACTGGTGGCTTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFSLRAD*NWWLLS Trigger: AGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCT...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTAGCGATGGCTCCAAGTaGCAGGGGTGTTGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFSDGSK*QGCCAR Trigger: TCTGGCACAACACCCCTGCCACTTGGAGCCATCGCT...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGTGGAGGGAGAAGCGATaGCTCCAAGTGGCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSWREKR*LQVAGV Trigger: CACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCA...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGGGATGGCTGCAGCCTaGAACAGAGAGGCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICGMAAA*NREADG Trigger: GCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CAA 72 bp | TTACAGTCACACACAGGGCTTATACTGCTGAATCCTTaGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSHTGLILLNP*GFSSTPSHWPG Trigger: GCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCAAAGGATTCAGCAGTATAAGCCCTGTGTGTGACTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSVLCQI*GERSLL Trigger: AAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACAC...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTGGCTTTTTCTTCTTCTaGCTCAGCAACAGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSGFFFF*LSNRPW Trigger: CCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCC...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTTTAGATCCTGTGTTGTaGGCCTCCAGCTGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVLDPVL*ASSCDR Trigger: CCTGTCACAGCTGGAGGCTCACAACACAGGATCTAA...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCATGGTAAGGCAGTGGCTCTTGGGCTGTCACTGAAGCAGAGCATGGTAAGTTTAGCTGGATGTTaGACACTTCACAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEHGKAVALGLSLKQSMVSLAGC*TLHKRR Trigger: TCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACT...TACCATGCTCTGCTTCAGTGACAGCCCAAGAGCCACTGCCTTACCATGCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR GCA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQAGISL*AVLGRN Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGGTAGTGGTGTGGCATaGGCTGCCTCTGCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVGSGVA*AASAGK Trigger: CTTCCCAGCAGAGGCAGCGCATGCCACACCACTACC...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGGAAGGGTAGTGGTGTaGCATGCGCTGCCTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVGRVVV*HALPVL Trigger: CAGCACAGGCAGCGCATGCCACACCACTACCCTTCC...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCACTTTGTGAGTGGGTGGGTGGGGTACTTACAGTCACACACAGGGCTTTGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHFVSGWVGYLQSHTGLWKEPF*VYFSLP Trigger: AGGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...AAGCCCTGTGTGTGACTGTAAGTACCCCACCCACCCACTCACAAAGTGCAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAGGGCTGACTGGAACTaGTGGCTTTTATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFRADWN*WLLSSL Trigger: AAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCT...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGGGATGGCTGCAGCCTaGAACAGAGAGGCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKGMAAA*NREADG Trigger: GCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCC...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGCAGCGCAGGAGGGATaGCTGCAGCCTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKAAQEG*LQPGTE Trigger: CTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGC...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTGCAGCGCAGGAGGGATaGCTGCAGCCTGGAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFAAQEG*LQPGTE Trigger: CTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGC...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAATCACACAGAGGAAAAGTACGATCAGCAGAGCATGGTGAGGCAGTGACTAGCATGGTGAGGCAGTaGTACAACTTGGGCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EESHRGKVRSAEHGEAVTSMVRQ*YNLGCY Trigger: GTAACAGCCCAAGTTGTACCACTGCCTCACCATGCT...AGTCACTGCCTCACCATGCTCTGCTGATCGTACTTTTCCTCTGTGTGATTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| CDS-3UTR TCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCTTGCCTCTAGAGCTTTaGCCTTCTTGGCATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFLPLEL*PSWHVY Trigger: GTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAA...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR TCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVVLCQI*GERSLL Trigger: AAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACAC...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTGGCTTTTTCTTCTTCTaGCTCAGCAACAGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVGFFFF*LSNRPW Trigger: CCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCC...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTCDGLLFHTRICPLGFAGISL*AVLGRN Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR GCA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTCCCTTACTGCCGTTCTaGACCTTTAATCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSPLLPF*TFNLDP Trigger: TGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGG...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCCATTGTGTTAAAGTTTaGAAAGAGCCCCACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFHCVKV*KEPHGR Trigger: TCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATG...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAAGCCTGAGGGCTGACTaGAACTGGTGGCTTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTSLRAD*NWWLLS Trigger: AGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCT...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCAGCGATGGCTCCAAGTaGCAGGGGTGTTGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVSDGSK*QGCCAR Trigger: TCTGGCACAACACCCCTGCCACTTGGAGCCATCGCT...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAGCGATGGCTCCAAGTaGCAGGGGTGTTGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHSDGSK*QGCCAR Trigger: TCTGGCACAACACCCCTGCCACTTGGAGCCATCGCT...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVRRLCS*REKRWL Trigger: GAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCG...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHRRLCS*REKRWL Trigger: GAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCG...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGTTAGATCCTGTGTTGTaGGCCTCCAGCTGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSLDPVL*ASSCDR Trigger: CCTGTCACAGCTGGAGGCTCACAACACAGGATCTAA...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGATTTATGCCTTCGGCTTaGAATGTGCTGTTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRFMPSA*NVLFEL Trigger: CAACTCAAACAGCACATTTCAAGCCGAAGGCATAAA...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAGAGACTCCAAATGTGTaGTTAATGACTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRETPNV*LMTAFC Trigger: GCAGAAAGCAGTCATTAACCACACATTTGGAGTCTC...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTATCTTCTTCGGGGGAATaGAGACTCCAAATGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLSSSGE*RLQMCG Trigger: ACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGA...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACATCTTCTTCGGGGGAATaGAGACTCCAAATGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTSSSGE*RLQMCG Trigger: ACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGA...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVPLRCP*KEPFWV Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTAGGGCTGACTGGAACTaGTGGCTTTTATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVRADWN*WLLSSL Trigger: AAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCT...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKRRLCS*REKRWL Trigger: GAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCG...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CAA 72 bp | ACGGAGCAGGACAGGACACAGGTCAGCTTTCATGCTTaGGCACAGAATGACAAAGGATCTTGGGATTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEQDRTQVSFHA*AQNDKGSWDSK Trigger: TTTAGAATCCCAAGATCCTTTGTCATTCTGTGCCAAAGCATGAAAGCTGACCTGTGTCCTGTCCTGCTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGTCTTCTTCTCCTTGCTaGACTGGTCCCCAGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKSSSPC*TGPQAC Trigger: ACAGGCCTGGGGACCAGTTCAGCAAGGAGAAGAAGA...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTTTGCCTCTAGAGCTTTaGCCTTCTTGGCATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVLPLEL*PSWHVY Trigger: GTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAA...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTATGTCCAGCGAAGGCTaGATCATCAGGGTGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFMSSEG*IIRVGV Trigger: CACACCCACCCTGATGATGCAGCCTTCGCTGGACAT...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CAACGAGGGTTACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGATTAATGACTGCTTTCTaGACAGGGTCCATTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRGLRSSTTQGTTVLGSRLMTAF*TGSIVL Trigger: TAACACAATGGACCCTGTGCAGAAAGCAGTCATTAA...TCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTAACCCTCGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAATGTGTGGTTAATGACTaGTTTCTGCACAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQCVVND*FLHRVH Trigger: ATGGACCCTGTGCAGAAAGCAGTCATTAACCACACA...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATTGTGTGGTTAATGACTaGTTTCTGCACAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNCVVND*FLHRVH Trigger: ATGGACCCTGTGCAGAAAGCAGTCATTAACCACACA...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTATGTGTGGTTAATGACTaGTTTCTGCACAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLCVVND*FLHRVH Trigger: ATGGACCCTGTGCAGAAAGCAGTCATTAACCACACA...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MDFCSTLEYARLDSGVIYAGISL*AVLGRN Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTCCCTTACTGCCGTTCTaGACCTTTAATCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFPLLPF*TFNLDP Trigger: TGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGG...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCGCAGCGGAGTTTAGCTaGATGTTGCACACTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSTCDGLLFHTRICPLGFAAEFS*MLHTSQ Trigger: TTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGC...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATGCAGCGGAGTTTAGCTaGATGTTGCACACTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYAAEFS*MLHTSQ Trigger: TTGTGAAGTGTGCAACATCCAGCTAAACTCCGCTGC...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTCTTCTTCGGGGGAATaGAGACTCCAAATGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYSSSGE*RLQMCG Trigger: ACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGA...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSGVIYRHPRKSLLFKSVPLRCP*KEPFWV Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...GACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATGCTGACTGGAACTGGTaGCTTTTATCTTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNADWNW*LLSSLC Trigger: ACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGC...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACATGGATAGGACTTAATTaGACCAGCTCCATTACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTWIGLN*TSSITS Trigger: GCTCGTAATGGAGCTGGTCCAATTAAGTCCTATCCA...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCTTCATCAGATCTTTCTaGAATGCAAGCTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLDSGVIYRHPRKSLLFFIRSF*NASFAA Trigger: AGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAA...GAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTTTCATGCTTTGGCACAGAATGACAAAGGATCTTGGGATTCTAAAATGGGCAGTGGTACAACTTaGGCTGTTACTGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSFHALAQNDKGSWDSKMGSGTT*AVTVLV Trigger: CACCAGCACAGTAACAGCCCAAGTTGTACCACTGCC...CATTTTAGAATCCCAAGATCCTTTGTCATTCTGTGCCAAAGCATGAAAGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| 3UTR CAA 72 bp | GCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTaGGATTCTGGAGTTATTTACAGACATCCGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMDFCSTLEYAR*DSGVIYRHPRK Trigger: CTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CAA 72 bp | GGATGGTATCCACAATTAAGCACTTGCGATGGACTTTaGTTCCACACTAGAATATGCCCGCTTGGATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWYPQLSTCDGL*FHTRICPLGFW Trigger: CCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACGGCTTTTTCTTCTTCTaGCTCAGCAACAGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDFCSTLEYARLDSGVIYGFFFF*LSNRPW Trigger: CCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCC...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGTTAGATCCTGTGTTGTaGGCCTCCAGCTGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKLDPVL*ASSCDR Trigger: CCTGTCACAGCTGGAGGCTCACAACACAGGATCTAA...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACATTTATGCCTTCGGCTTaGAATGTGCTGTTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTFMPSA*NVLFEL Trigger: CAACTCAAACAGCACATTTCAAGCCGAAGGCATAAA...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAAGAGCTACTGTCCACTaGAAAAGACATGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLRATVH*KRHERF Trigger: AAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCT...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTAGAGCTACTGTCCACTaGAAAAGACATGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAMDFCSTLEYARLDSGVRATVH*KRHERF Trigger: AAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCT...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAGAGACTCCAAATGTGTaGTTAATGACTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLETPNV*LMTAFC Trigger: GCAGAAAGCAGTCATTAACCACACATTTGGAGTCTC...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTGGATAGGACTTAATTaGACCAGCTCCATTACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYWIGLN*TSSITS Trigger: GCTCGTAATGGAGCTGGTCCAATTAAGTCCTATCCA...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CAA 72 bp | GACAACTCAGAAAGCAAACCAACTCAGAACTCTGCCTaGCCTTGCAAGGCTGCTTTTAAACACTGCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DNSESKPTQNSA*PCKAAFKHCLK Trigger: TTTCAAGCAGTGTTTAAAAGCAGCCTTGCAAGGCAAGGCAGAGTTCTGAGTTGGTTTGCTTTCTGAGTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLVLCQI*GERSLL Trigger: AAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACAC...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTATTTGAGTTGAATCTCTaGGTTCACGTGAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLFELNL*VHVNIT Trigger: TGTGATGTTCACGTGAACTCAGAGATTCAACTCAAA...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAATTTGAGTTGAATCTCTaGGTTCACGTGAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQFELNL*VHVNIT Trigger: TGTGATGTTCACGTGAACTCAGAGATTCAACTCAAA...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTTTGAAATGTGCTGTTTaGGTTGAATCTCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSLKCAV*VESLSS Trigger: TGAACTCAGAGATTCAACTCAAACAGCACATTTCAA...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | ATATCTTCTGTACATTATTGCATCAGGGAGCCACAGAGTTATGTAGCATTGTTAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVHYCIREPQSYVALLAGISL*AVLGRN Trigger: GTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGC...TAACAATGCTACATAACTCTGTGGCTCCCTGATGCAATAATGTACAGAAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCCTTACTGCCGTTCTaGACCTTTAATCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICPLLPF*TFNLDP Trigger: TGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGG...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTGAGACTCCAAATGTGTaGTTAATGACTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFETPNV*LMTAFC Trigger: GCAGAAAGCAGTCATTAACCACACATTTGGAGTCTC...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACTCTTCTTCGGGGGAATaGAGACTCCAAATGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHSSSGE*RLQMCG Trigger: ACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGA...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACCCTTTGCGCTGTCCTTaGAAGGAACCATTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHPLRCP*KEPFWV Trigger: AACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGG...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGTGGATAGGACTTAATTaGACCAGCTCCATTACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSWIGLN*TSSITS Trigger: GCTCGTAATGGAGCTGGTCCAATTAAGTCCTATCCA...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| 3UTR CAA 72 bp | GCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTaGTTTCTAAGCCAGATCATTACGCCATGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AYCSSLSGRDSI*FLSQIITPWEH Trigger: GTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGGAGTTAAAGCGAAGCTaGCAGACGTTACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: DSILFLSQIITPWEHTRSELKRS*QTLQEI Trigger: TATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTC...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACTTGCCTCTAGAGCTTTaGCCTTCTTGGCATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHLPLEL*PSWHVY Trigger: GTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAA...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTCCTTGCCTCTAGAGCTTTaGCCTTCTTGGCATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRHGNTQGRFSFSDQYISLPLEL*PSWHVY Trigger: GTAAACATGCCAAGAAGGTCAAAGCTCTAGAGGCAA...GGAAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | ATATCTTCTGTACATTATTGCATCAGGGAGCCACAGAGTTATGTAGCATTGTTAGGCTTTTTCTTCTTCTaGCTCAGCAACAGACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSVHYCIREPQSYVALLGFFFF*LSNRPW Trigger: CCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAGCC...TAACAATGCTACATAACTCTGTGGCTCCCTGATGCAATAATGTACAGAAGATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTTTTGAGTTGAATCTCTaGGTTCACGTGAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFFELNL*VHVNIT Trigger: TGTGATGTTCACGTGAACTCAGAGATTCAACTCAAA...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTATTGAAATGTGCTGTTTaGGTTGAATCTCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EYARLDSGVIYRHPRKSLLKCAV*VESLSS Trigger: TGAACTCAGAGATTCAACTCAAACAGCACATTTCAA...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCAGTTTAGCTGGATGTTaGACACTTCACAAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTCDGLLFHTRICPLGFSLAGC*TLHKRR Trigger: TCTCCTTTTGTGAAGTGTGCAACATCCAGCTAAACT...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR GCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTTTAATGACTGCTTTCTaGACAGGGTCCATTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFLMTAF*TGSIVL Trigger: TAACACAATGGACCCTGTGCAGAAAGCAGTCATTAA...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTCCCTTACTGCCGTTCTaGACCTTTAATCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFPLLPF*TFNLDP Trigger: TGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGG...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAATGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQWKEPF*VYFSLP Trigger: AGGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGCTGACTGGAACTGGTaGCTTTTATCTTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVADWNW*LLSSLC Trigger: ACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGC...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTCCGCTGACTGGAACTGGTaGCTTTTATCTTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRHGNTQGRFSFSDQYISADWNW*LLSSLC Trigger: ACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGC...GGAAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGAGGGCTGACTGGAACTaGTGGCTTTTATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLRADWN*WLLSSL Trigger: AAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCT...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGAGTTAAAGCGAAGCTaGCAGACGTTACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVELKRS*QTLQEI Trigger: TATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTC...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTGAAATGTGCTGTTTaGGTTGAATCTCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYLKCAV*VESLSS Trigger: TGAACTCAGAGATTCAACTCAAACAGCACATTTCAA...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTTTGAAATGTGCTGTTTaGGTTGAATCTCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSEEEPTVQVCQEEILFLKCAV*VESLSS Trigger: TGAACTCAGAGATTCAACTCAAACAGCACATTTCAA...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCTTTATGCCTTCGGCTTaGAATGTGCTGTTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICFMPSA*NVLFEL Trigger: CAACTCAAACAGCACATTTCAAGCCGAAGGCATAAA...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR GCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTTGTGTGGTTAATGACTaGTTTCTGCACAGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFCVVND*FLHRVH Trigger: ATGGACCCTGTGCAGAAAGCAGTCATTAACCACACA...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGCATTGTGTTAAAGTTTaGAAAGAGCCCCACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLHCVKV*KEPHGR Trigger: TCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATG...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR CCA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTGCTGACTGGAACTGGTaGCTTTTATCTTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HYAMGTHKVGFLSLINIFADWNW*LLSSLC Trigger: ACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGC...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR TCA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCTTTGAGTTGAATCTCTaGGTTCACGTGAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVFELNL*VHVNIT Trigger: TGTGATGTTCACGTGAACTCAGAGATTCAACTCAAA...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR GCA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACTTAATGACTGCTTTCTaGACAGGGTCCATTGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MDFCSTLEYARLDSGVIYLMTAF*TGSIVL Trigger: TAACACAATGGACCCTGTGCAGAAAGCAGTCATTAA...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGAGAGCTACTGTCCACTaGAAAAGACATGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLRATVH*KRHERF Trigger: AAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCT...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | ATATCTTCTGTACATTATTGCATCAGGGAGCCACAGAGTTATGTAGCATTGTTACATTGTGTTAAAGTTTaGAAAGAGCCCCACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISSVHYCIREPQSYVALLHCVKV*KEPHGR Trigger: TCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATG...TAACAATGCTACATAACTCTGTGGCTCCCTGATGCAATAATGTACAGAAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCTTCATCAGATCTTTCTaGAATGCAAGCTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYPQLSTCDGLLFHTRICFIRSF*NASFAA Trigger: AGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAA...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR TCA 90 bp | ATATCTTCTGTACATTATTGCATCAGGGAGCCACAGAGTTATGTAGCATTGTTAGAGTTAAAGCGAAGCTaGCAGACGTTACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ISSVHYCIREPQSYVALLELKRS*QTLQEI Trigger: TATTTCCTGTAACGTCTGTCAGCTTCGCTTTAACTC...TAACAATGCTACATAACTCTGTGGCTCCCTGATGCAATAATGTACAGAAGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTCATCAGATCTTTCTaGAATGCAAGCTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLFIRSF*NASFAA Trigger: AGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAA...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
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| CDS-3UTR CCA 90 bp | AAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGTGGAAGGAACCATTTTaGGTTTATTTTTCGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRFYFVSKPDHYAMGTHKWKEPF*VYFSLP Trigger: AGGCAACGAAAAATAAACCCAAAATGGTTCCTTCCA...CTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CCA 90 bp | TGGCCCGGATGGGCCCGTGGCCAGGCCTCAGCAGCGCAGGAGGGATaGCTGCAGCCTGGAACAGAGAGGCGGATGGCCGAGGTGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPGWARGQASAAQEG*LQPGTERRMAEVAV Trigger: CACTGCCACCTCGGCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGCTGAGGCCTGGCCACGGGCCCATCCGGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CCA 90 bp | GGCCCGTGGCCAGGCCTCAGCAGCGCAGGAGGGATGGCTGCAGCCTaGAACAGAGAGGCGGATGGCCGAGGTGGCAGTGACAGCGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPWPGLSSAGGMAAA*NREADGRGGSDSAE Trigger: CTCTGCGCTGTCACTGCCACCTCGGCCATCCGCCTCTCTGTTCCAGGCTGCAGCCATCCCTCCTGCGCTGCTGAGGCCTGGCCACGGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS GCA 90 bp | CAGGGTGGGTGTGCGCACGAGGGCAGGAAGGGTAGTGGTGTGGCATaGGCTGCCTGTGCTGGTGTTCGGGCCAGGCCCAGGGCAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGGCAHEGRKGSGVA*AACAGVRARPRARA Trigger: TGCCCTTGCCCTGGGCCTGGCCCGAACACCAGCACAGGCAGCGCATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCACCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS CCA 90 bp | ATCATCAGGGTGGGTGTGCGCACGAGGGCAGGAAGGGTAGTGGTGTaGCATGCGCTGCCTGTGCTGGTGTTCGGGCCAGGCCCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IIRVGVRTRAGRVVV*HALPVLVFGPGPGQ Trigger: TTGCCCTGGGCCTGGCCCGAACACCAGCACAGGCAGCGCATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCACCCTGATGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS TCA 90 bp | AGGGAGAAGCGATGGCTCCAAGTGGCAGGGGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTTCGGAGCCTGAGGGCTGACTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: REKRWLQVAGVLCQI*GERSLLRSLRADWN Trigger: GTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CCA 90 bp | CTTCTTCTGACTCAGCAACAGACCCTGGAGCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTCCAAGTGGCAGGGGTGTTGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLTQQQTLERRLCS*REKRWLQVAGVLCQ Trigger: CTGGCACAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGGTCTGTTGCTGAGTCAGAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTTTTCTTCTACACCTTCCCACTGGCCTGGCCTGTCGCGGGCTCTGGGTGGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WAFLLHLPTGLACRGLWVAFALS*EGTILG Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...CACCCAGAGCCCGCGACAGGCCAGGCCAGTGGGAAGGTGTAGAAGAAAAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS CCA 90 bp | TGGAGCGCCGTTTGTGCTCTTGGAGGGAGAAGCGATGGCTCCAAGTaGCAGGGGTGTTGTGCCAGATTTGAGGAGAAAGGAGCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSAVCALGGRSDGSK*QGCCARFEEKGASF Trigger: GAAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CAATTGGCTGGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTAAAGACATGAACGGTTaGATGTCCAGCGAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLAGVGWRGHRKRRALEPKDMNG*MSSEGC Trigger: GCAGCCTTCGCTGGACATCAAACCGTTCATGTCTTT...AGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS GCA 90 bp | CTTTTTCTTCTTCTGACTCAGCAACAGACCCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGATGGCTCCAAGTGGCAGGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLLLTQQQTLERRL*SWREKRWLQVAGVL Trigger: CAACACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGGTCTGTTGCTGAGTCAGAAGAAGAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS TCA 90 bp | GGGTGTTGTGCCAGATTTGAGGAGAAAGGAGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGTGGCTTTTATCTTCCCTTTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GCCARFEEKGASFGA*GLTGTGGFYLPFVF Trigger: GAAGACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CAATTGGCTGGGGTAGGATGGAGAGGGCACCGGAAGAGACGCGCCCTTGAGCCTGCTTTTATCTTCCCTTaGTCTTCTGATTTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLAGVGWRGHRKRRALEPAFIFP*SSDLSE Trigger: CTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGC...AGGCTCAAGGGCGCGTCTCTTCCGGTGCCCTCTCCATCCTACCCCAGCCAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGCGCCGTTTGTGCTCTaGGAGGGAGAAGCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQAPFVL*EGEAMA Trigger: AGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGC...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS TCA 90 bp | GTGCCAGATTTGAGGAGAAAGGAGCCTCCTTCGGAGCCTGAGGGCTaGCTGGAACTGGTGGCTTTTATCTTCCCTTTGTCTTCTGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPDLRRKEPPSEPEG*LELVAFIFPLSSDL Trigger: CAAATCAGAAGACAAAGGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCGCGCCGTTTGTGCTCTaGGAGGGAGAAGCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTCDGLLFHTRICPLGFAPFVL*EGEAMA Trigger: AGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGC...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTTTGCAGCTAAGATGCTaGGGCTCCGCTGCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPLQLRC*GSAAAC Trigger: ACAAGCTGCAGCGGAGCCCAAGCATCTTAGCTGCAA...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TACGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACATTGCAGCTAAGATGCTaGGGCTCCGCTGCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YDLVLRRVQQYSGLEQYTLQLRC*GSAAAC Trigger: ACAAGCTGCAGCGGAGCCCAAGCATCTTAGCTGCAA...TGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS CCA 90 bp | TGTGTTAAAGTTTGGAAAGAGCCCCACGGCAGAGCTACTGTCCACTaGAAAAGACATGAACGGTTTGATGTCCAGCGAAGGCTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CVKVWKEPHGRATVH*KRHERFDVQRRLHH Trigger: ATGATGCAGCCTTCGCTGGACATCAAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCTGCCGTGGGGCTCTTTCCAAACTTTAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AACTGCTTCCCAGGACACAACAGGGCTGAGGCACACAATCTTGAAATACAAGTAATCTTCTTCTTCTCCTaGCTGAACTGGTCCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NCFPGHNRAEAHNLEIQVIFFFS*LNWSPG Trigger: GCCTGGGGACCAGTTCAGCAAGGAGAAGAAGAAGAT...TACTTGTATTTCAAGATTGTGTGCCTCAGCCCTGTTGTGTCCTGGGAAGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
||
| CDS-3UTR CAA 90 bp | GAATATGCCCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTAATCTTCTTCTTCTCCTaGCTGAACTGGTCCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EYARLDSGVIYRHPRKSLIFFFS*LNWSPG Trigger: GCCTGGGGACCAGTTCAGCAAGGAGAAGAAGAAGAT...TAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGGGCATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CAA 90 bp | CCGCTTGGATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFWSYLQTSEEEPTVQAFALS*EGTILG Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...TTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATCCAAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNAFALS*EGTILG Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACGCGCCGTTTGTGCTCTaGGAGGGAGAAGCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MDFCSTLEYARLDSGVIYAPFVL*EGEAMA Trigger: AGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGC...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | GATTCTGGAGTTATTTACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCATCTTCTTCTTCTCCTaGCTGAACTGGTCCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSGVIYRHPRKSLLFKSVIFFFS*LNWSPG Trigger: GCCTGGGGACCAGTTCAGCAAGGAGAAGAAGAAGAT...GACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTAAATAACTCCAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS-3UTR CAA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTGCGCCGTTTGTGCTCTaGGAGGGAGAAGCGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HYAMGTHKVGFLSLINIFAPFVL*EGEAMA Trigger: AGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGC...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGCCTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPASTMV*CLDPVL Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAGGC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGTGGACACTAGTTCTGCACCTTTAATCTaGACCCAGGTCTTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVQQYSGLEQYTIPVDTSSAPLI*TQVLDR Trigger: CCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGA...ACTAGTGTCCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTCCTTTGTCTTCTGATTaGTCAGAGCTGTCGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSEEEPTVQVCQEEILFPLSSD*SELSPV Trigger: CACAGGCGACAGCTCTGACAAATCAGAAGACAAAGG...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCCCTTTGTCTTCTGATTaGTCAGAGCTGTCGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSTCDGLLFHTRICPLGFPLSSD*SELSPV Trigger: CACAGGCGACAGCTCTGACAAATCAGAAGACAAAGG...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTGCCTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAMDFCSTLEYARLDSGVASTMV*CLDPVL Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAGGC...AACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTAGAGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPRALTF*ACLLPL Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCTCT...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGGTGTTGTGCCAGATTaGAGGAGAAAGGAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVGVVPD*RRKEPP Trigger: AGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACC...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCGGTGTTGTGCCAGATTaGAGGAGAAAGGAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WYPQLSTCDGLLFHTRICGVVPD*RRKEPP Trigger: AGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACC...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATTTGCCTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTSEEEPTVQVCQEEILFASTMV*CLDPVL Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAGGC...AAATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTGCAGCTAAGATGCTaGGGCTCCGCTGCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLLQLRC*GSAAAC Trigger: ACAAGCTGCAGCGGAGCCCAAGCATCTTAGCTGCAA...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS GCA 90 bp | AGATCTCACAATGAAACATTTTGTTCTGTAGTCCTGAGCCCTTACTaGCGTTCTGCACCTTTAATCTTGACCCAGGTCTTGGATAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSHNETFCSVVLSPY*RSAPLILTQVLDRT Trigger: AGTCCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGGCTCAGGACTACAGAACAAAATGTTTCATTGTGAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAAGACATGAACGGTTaGATGTCCAGCGAAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHKDMNG*MSSEGC Trigger: GCAGCCTTCGCTGGACATCAAACCGTTCATGTCTTT...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATCCACAATTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCTTTGTCTTCTGATTaGTCAGAGCTGTCGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WYPQLSTCDGLLFHTRICPLSSD*SELSPV Trigger: CACAGGCGACAGCTCTGACAAATCAGAAGACAAAGG...GCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAATTGTGGATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCTGGAGTTATTTACCCTTTGTCTTCTGATTaGTCAGAGCTGTCGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MDFCSTLEYARLDSGVIYPLSSD*SELSPV Trigger: CACAGGCGACAGCTCTGACAAATCAGAAGACAAAGG...GTAAATAACTCCAGAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATCCCTGCTTTTATCTTCCCTTaGTCTTCTGATTTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVLRRVQQYSGLEQYTIPAFIFP*SSDLSE Trigger: CTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGC...AGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGGGTGTTGTGCCAGATTaGAGGAGAAAGGAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLGVVPD*RRKEPP Trigger: AGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACC...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | GATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCGTCTGCACCTTTAATCTaGACCCAGGTCTTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSILFLSQIITPWEHTRSSAPLI*TQVLDR Trigger: CCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGA...CGACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCACTTGCGATGGACTTTTGTTCCACACTAGAATATGCCCGCTTGGATTCAGAGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSTCDGLLFHTRICPLGFRALTF*ACLLPL Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCTCT...GAATCCAAGCGGGCATATTCTAGTGTGGAACAAAAGTCCATCGCAAGTGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTTTTGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CRCTEGAKMCNLGSSFCFAFALS*EGTILG Trigger: ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGC...AAAACAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CGATCTAGTACTACGCAGGGTACAACAGTACTCGGGTCTAGAACAGTACACAATGCTTTTATCTTCCCTTaGTCTTCTGATTTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSTTQGTTVLGSRTVHNAFIFP*SSDLSE Trigger: CTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGC...ATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGTAGTACTAGATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | ATATCTTCTGTACATTATTGCATCAGGGAGCCACAGAGTTATGTAGCATTGTTAGGTGTTGTGCCAGATTaGAGGAGAAAGGAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISSVHYCIREPQSYVALLGVVPD*RRKEPP Trigger: AGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACC...TAACAATGCTACATAACTCTGTGGCTCCCTGATGCAATAATGTACAGAAGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACTCTGCACCTTTAATCTaGACCCAGGTCTTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRFYFVSKPDHYAMGTHSAPLI*TQVLDR Trigger: CCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGA...GTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCTCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TACAGACATCCGAGGAAGAGCCTACTGTTCAAGTCTGTCAGGAAGAGATTCTATGCTTTTATCTTCCCTTaGTCTTCTGATTTGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YRHPRKSLLFKSVRKRFYAFIFP*SSDLSE Trigger: CTCTGACAAATCAGAAGACAAAGGGAAGATAAAAGC...ATAGAATCTCTTCCTGACAGACTTGAACAGTAGGCTCTTCCTCGGATGTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | CATTACGCCATGGGAACACACAAGGTCGGTTTTCTTTCTCTGATCAATATATTTGCCTCAACCATGGTCTaGTGTTTAGATCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HYAMGTHKVGFLSLINIFASTMV*CLDPVL Trigger: CAACACAGGATCTAAACACAAGACCATGGTTGAGGC...AAATATATTGATCAGAGAAAGAAAACCGACCTTGTGTGTTCCCATGGCGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCAGATGCACAGAAGGTGCAAAAATGTGCAATTTAGGAAGCTCTTTTTGTCTGCACCTTTAATCTaGACCCAGGTCTTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLQMHRRCKNVQFRKLFLSAPLI*TQVLDR Trigger: CCTATCCAAGACCTGGGTCAAGATTAAAGGTGCAGA...CAAAAAGAGCTTCCTAAATTGCACATTTTTGCACCTTCTGTGCATCTGCAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000171063.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCTATTTTGTTTCTAAGCCAGATCATTACGCCATGGGAACACACAAGGTCAGAGCTTTGACCTTCTaGGCATGTTTACTTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFYFVSKPDHYAMGTHKVRALTF*ACLLPL Trigger: CAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCTCT...GACCTTGTGTGTTCCCATGGCGTAATGATCTGGCTTAGAAACAAAATAGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS CCA 72 bp | AAGGGGCAAAGAGGATGGAGGCGGGCGTGGCCCGGATaGGCCCGTGGCCAGGCCTCAGCAGCGCAGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KGQRGWRRAWPG*ARGQASAAQEG Trigger: TCCCTCCTGCGCTGCTGAGGCCTGGCCACGGGCCCATCCGGGCCACGCCCGCCTCCATCCTCTTTGCCCCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
||
| CDS CCA 72 bp | GTGGGTGTGCGCACGAGGGCAGGAAGGGTAGTGGTGTaGCATGCGCTGCCTGTGCTGGTGTTCGGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGVRTRAGRVVV*HALPVLVFGPG Trigger: GCCTGGCCCGAACACCAGCACAGGCAGCGCATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 |
||
| CDS CCA 72 bp | GTGGGTGTGCGCACGAGGGCAGGAAGGGTAGTGGTGTaGCATGCGCTGCCTCTGCTGGGAAGTCCACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VGVRTRAGRVVV*HALPLLGSPLH Trigger: GTGGAGTGGACTTCCCAGCAGAGGCAGCGCATGCCACACCACTACCCTTCCTGCCCTCGTGCGCACACCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171063.8 |
||
| CDS TCA 72 bp | GGACCGGGGGTGGGGGCTGGCCATCGCTCAGCTGCTTaGCCCGCTTTCGATGGGATTTGCCGTCATAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPGVGAGHRSAA*PAFDGICRHNG Trigger: TCCATTATGACGGCAAATCCCATCGAAAGCGGGTCAAGCAGCTGAGCGATGGCCAGCCCCCACCCCCGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111829.2 ENSMUST00000111831.8 |
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| CDS GCA 72 bp | CATGGTGAGGCAGTGGTACAACTTGGGCTGTTACTGTaGTGGTGTTCGGGCCAGGCCCAGGGCAAGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: HGEAVVQLGLLL*WCSGQAQGKGK Trigger: CTTGCCCTTGCCCTGGGCCTGGCCCGAACACCAGCACAGTAACAGCCCAAGTTGTACCACTGCCTCACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| CDS CCA 72 bp | ACTCAGCAACAGACCCTGGAGCGCCGTTTGTGCTCTTaGAGGGAGAAGCGATGGCTCCAAGTGGCAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TQQQTLERRLCS*REKRWLQVAGV Trigger: CACCCCTGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGGTCTGTTGCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS TCA 72 bp | CGATGGCTCCAAGTGGCAGGGGTGTTGTGCCAGATTTaGGGAGAAAGGAGCCTCCTTCGGAGCCTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RWLQVAGVLCQI*GERSLLRSLRA Trigger: AGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGCACAACACCCCTGCCACTTGGAGCCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CAA 90 bp | AGCCCCACGGCAGAGCTACTGTCCACTGGAAAAGACATGAACGGTTaGATGTCCAGCGAAGGCTGCATCATCAGGGTGGGTGTGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: SPTAELLSTGKDMNG*MSSEGCIIRVGVRT Trigger: CGTGCGCACACCCACCCTGATGATGCAGCCTTCGCTGGACATCAAACCGTTCATGTCTTTTCCAGTGGACAGTAGCTCTGCCGTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS GCA 72 bp | CTTCTGACTCAGCAACAGACCCTGGAGCGCCGTTTGTaGTCTTGGAGGGAGAAGCGATGGCTCCAAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LLTQQQTLERRL*SWREKRWLQVA Trigger: TGCCACTTGGAGCCATCGCTTCTCCCTCCAAGAGCACAAACGGCGCTCCAGGGTCTGTTGCTGAGTCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CAA 72 bp | TCACTGAAGCAGAGCATGGTGAGGCAGTGGTACAACTaGGGCTGTTACTGTGCTGGTGTTCGGGCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SLKQSMVRQWYN*GCYCAGVRARP Trigger: GGGCCTGGCCCGAACACCAGCACAGTAACAGCCCAAGTTGTACCACTGCCTCACCATGCTCTGCTTCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111829.2 |
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| CDS GCA 72 bp | GGAAAAGACATGAACGGTTTGATGTCCAGCGAAGGCTaGATCATCAGGGTGGGTGTGCGCACGAGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GKDMNGLMSSEG*IIRVGVRTRAG Trigger: TCCTGCCCTCGTGCGCACACCCACCCTGATGATGCAGCCTTCGCTGGACATCAAACCGTTCATGTCTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090766.12 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS TCA 72 bp | GCCAGATTTGAGGAGAAAGGAGCCTCCTTCGGAGCCTaGGGGCTGACTGGAACTGGTGGCTTTTATCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ARFEEKGASFGA*GLTGTGGFYLP Trigger: GGGAAGATAAAAGCCACCAGTTCCAGTCAGCCCTCAGGCTCCGAAGGAGGCTCCTTTCTCCTCAAATCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS GCA 72 bp | TGTGCCTGGCCTGATGGAGCAGCTGGGATTAGCCTTTaGGCTGTCCTTGGAAGGAACCATTTTGGGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: CAWPDGAAGISL*AVLGRNHFGFI Trigger: AATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCAGGCCAGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CAA 72 bp | CCAGAGGCTTCATCAGATCTTTCTGGAATGCAAGCTTaGCAGCTAAGATGCTTGGGCTCCGCTGCAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PEASSDLSGMQA*QLRCLGSAAAC Trigger: ACAAGCTGCAGCGGAGCCCAAGCATCTTAGCTGCAAAGCTTGCATTCCAGAAAGATCTGATGAAGCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CAA 72 bp | CTGATGGAGCAGCTGGGATTAGCCTTTGCGCTGTCCTaGGAAGGAACCATTTTGGGTTTATTTTTCGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LMEQLGLAFALS*EGTILGLFFVA Trigger: GGCAACGAAAAATAAACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS CCA 72 bp | TGTTTCTTCTTCGGGGGAATGGAGACTCCAAATGTGTaGTTAATGACTGCTTTCTGCACAGGGTCCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: CFFFGGMETPNV*LMTAFCTGSIV Trigger: CACAATGGACCCTGTGCAGAAAGCAGTCATTAACCACACATTTGGAGTCTCCATTCCCCCGAAGAAGAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS GCA 72 bp | AATGAAACATTTTGTTCTGTAGTCCTGAGCCCTTACTaGCGTTCTGCACCTTTAATCTTGACCCAGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: NETFCSVVLSPY*RSAPLILTQVL Trigger: CAAGACCTGGGTCAAGATTAAAGGTGCAGAACGGCAGTAAGGGCTCAGGACTACAGAACAAAATGTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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| CDS GCA 72 bp | ATGGAGACTCCAAATGTGTGGTTAATGACTGCTTTCTaGACAGGGTCCATTGTGTTAAAGTTTGGAAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: METPNVWLMTAF*TGSIVLKFGKS Trigger: GCTCTTTCCAAACTTTAACACAATGGACCCTGTGCAGAAAGCAGTCATTAACCACACATTTGGAGTCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090766.12 ENSMUST00000111830.9 ENSMUST00000111831.8 ENSMUST00000171063.8 |
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