RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP384 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038346

Ensembl transcript IDs: ENSMUST00000046064.17, ENSMUST00000054553.11, ENSMUST00000084275.12, ENSMUST00000088308.10, ENSMUST00000112424.2, ENSMUST00000112425.8, ENSMUST00000112427.8, ENSMUST00000112428.8, ENSMUST00000152752.8

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGCTGAGAATAAGGATGGTTATCTTGCGAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAAGAGA +
Preference number: 1 (lower is better)
Translates to: AAENKDGYLAKKSHA*DPRSWRQDLSRKKR
Trigger: TCTCTTCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTATTCTCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR TCA 90 bp TATATTTATATATATATATTTATATATAAATCCATGTCCGGCATCTaGCCGTGGCACCTAGGGAGGCTAAGTCCAGTCCTGTGTGTGCCC +
Preference number: 1 (lower is better)
Translates to: YIYIYIFIYKSMSGI*PWHLGRLSPVLCVP
Trigger: GGGCACACACAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATAAATATATATATATAAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR CAA 90 bp GAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGAGCTCCTaGGACTGGGATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCA +
Preference number: 2 (lower is better)
Translates to: EWYCREHSYHSSQSS*DWDSETEYIGPWLA
Trigger: TGCCAACCAAGGGCCTATATACTCAGTCTCGCTATCCCAGTCCAAGGAGCTCTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCKKSHA*DPRSWR
Trigger: TCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTT...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSKKSHA*DPRSWR
Trigger: TCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTT...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LLCKRPNGIAENTATTAPKKSHA*DPRSWR
Trigger: TCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGCACCTTGGCAACCATaGATCAGCTATTGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: LLCKRPNGIAENTATTAPAPWQP*ISYCPL
Trigger: AAGGGGGCAATAGCTGATTCATGGTTGCCAAGGTGC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTCACCGGGGAATCTCTaGCACCTTGGCAACCATGAA +
Preference number: 2 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQSPGNL*HLGNHE
Trigger: TTCATGGTTGCCAAGGTGCCAGAGATTCCCCGGTGA...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR CAA 90 bp TGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTaGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAG +
Preference number: 2 (lower is better)
Translates to: CYLGGPATSLPSTST*RMKREKGKRPTLDK
Trigger: CTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGCACCTTGGCAACCATaGATCAGCTATTGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: SLLCKRPNGIAENTATTAAPWQP*ISYCPL
Trigger: AAGGGGGCAATAGCTGATTCATGGTTGCCAAGGTGC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTAGAACGGAAGGCTGGTaGCATTTAGAGCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCRTEGW*HLELPS
Trigger: AGAAGGAAGCTCTAAATGCCACCAGCCTTCCGTTCT...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCKKSHA*DPRSWR
Trigger: TCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTCACCCAATATAAAGTaGGACCACGGAAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQSPNIK*DHGRGR
Trigger: TCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGA...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATCACCCAATATAAAGTaGGACCACGGAAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: GKITHTLKPPLVTGESLASPNIK*DHGRGR
Trigger: TCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAAGAACGGAAGGCTGGTaGCATTTAGAGCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: GKITHTLKPPLVTGESLARTEGW*HLELPS
Trigger: AGAAGGAAGCTCTAAATGCCACCAGCCTTCCGTTCT...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELKKSHA*DPRSWR
Trigger: TCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTT...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACAGAACGGAAGGCTGGTaGCATTTAGAGCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHRTEGW*HLELPS
Trigger: AGAAGGAAGCTCTAAATGCCACCAGCCTTCCGTTCT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAAGAACGGAAGGCTGGTaGCATTTAGAGCTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIRTEGW*HLELPS
Trigger: AGAAGGAAGCTCTAAATGCCACCAGCCTTCCGTTCT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGAATCTCTGGCACCTaGGCAACCATGAATCAGCTA +
Preference number: 3 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGISGT*ATMNQL
Trigger: TAGCTGATTCATGGTTGCCAAGGTGCCAGAGATTCC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR TCA 72 bp AATAAGGATGGTTATCTTGCGAAGAAAAGCCATGCCTaGGACCCAAGGAGCTGGAGACAGGACTTGTCAAGG +
Preference number: 3 (lower is better)
Translates to: NKDGYLAKKSHA*DPRSWRQDLSR
Trigger: CCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCTTCGCAAGATAACCATCCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCATCAACCTCAACTTaGAGGATGAAGAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SLLCKRPNGIAENTATTAPSTST*RMKREK
Trigger: TTTCTCTCTCTTCATCCTCAAAGTTGAGGTTGATGG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR CCA 72 bp TGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTaGCATTTAGAGCTTCCTTCTCTGTTATCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: CSFTGKHRTEGW*HLELPSLLSGR
Trigger: CCTCCCAGATAACAGAGAAGGAAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR TCA 72 bp ATATATATATTTATATATAAATCCATGTCCGGCATCTaGCCGTGGCACCTAGGGAGGCTAAGTCCAGTCCTG +
Preference number: 3 (lower is better)
Translates to: IYIFIYKSMSGI*PWHLGRLSPVL
Trigger: CAGGACTGGACTTAGCCTCCCTAGGTGCCACGGTCAGATGCCGGACATGGATTTATATATAAATATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATACCATCAACCTCAACTTaGAGGATGAAGAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIPSTST*RMKREK
Trigger: TTTCTCTCTCTTCATCCTCAAAGTTGAGGTTGATGG...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGCACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGACCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQTTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCCACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCCCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGCCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGACACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQCCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGAGCTGCGGAGGCTGTaGTCACAAGAGAGCCTGACG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQELRRL*SQESLT
Trigger: CGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCATGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACAGTGCGGGCACTTGTaGGGCTTGATGGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQQCGHL*GLMVSV
Trigger: CACGGAGACCATCAAGCCCCACAAGTGCCCGCACTG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR TCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGCCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGCATCTCAGGAAGCCCTaGCTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPHLRKP*LQHPLL
Trigger: AAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATG...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTGTGCATCTTGGAGTaGATCCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSVCILE*IRVCCC
Trigger: GCAGCAGCACACCCGGATTCACTCCAAGATGCACAC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPRESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKTTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTGGATTCGGGTGTGCTaGTGCAGATGTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPWIRVC*CRCESW
Trigger: CCAGCTCTCACATCTGCAGCAGCACACCCGAATCCA...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCCCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCRGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGCTGCCCCAGGGGACTaGAAGTGTGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPAAPGD*KCGGCG
Trigger: GCCACAACCACCACACTTCCAGTCCCCTGGGGCAGC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCACAGTGCGGGCACTTGTaGGGCTTGATGGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSQCGHL*GLMVSV
Trigger: CACGGAGACCATCAAGCCCCACAAGTGCCCGCACTG...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR TCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGTGTGCATCTTGGAGTaGATCCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCVCILE*IRVCCC
Trigger: GCAGCAGCACACCCGGATTCACTCCAAGATGCACAC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCETTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTATTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGAGCTGCGGAGGCTGTaGTCACAAGAGAGCCTGACG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKELRRL*SQESLT
Trigger: CGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPLTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGACAGCAAGTTCGTGGTaGAGCCGGGAACTGAATCCA +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPTASSW*SRELNP
Trigger: TGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGT...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPRGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKRGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELRGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGCTGCCCCAGGGGACTaGAAGTGTGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAAAPGD*KCGGCG
Trigger: GCCACAACCACCACACTTCCAGTCCCCTGGGGCAGC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGCTGCCCCAGGGGACTaGAAGTGTGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEAAPGD*KCGGCG
Trigger: GCCACAACCACCACACTTCCAGTCCCCTGGGGCAGC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCAGTGCGGGCACTTGTaGGGCTTGATGGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELQCGHL*GLMVSV
Trigger: CACGGAGACCATCAAGCCCCACAAGTGCCCGCACTG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGGTCTATCACCAGTGTaGATTCGTGTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPGLSPV*IRVCCW
Trigger: CCAGCAGCACACACGAATCCACACTGGTGATAGACC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
3UTR CAA 72 bp TGCAGAGAACACAGCTACCACAGCTCCCAGAGCTCCTaGGACTGGGATAGCGAGACTGAGTATATAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CREHSYHSSQSS*DWDSETEYIGP
Trigger: AGGGCCTATATACTCAGTCTCGCTATCCCAGTCCAAGGAGCTCTGGGAGCTGTGGTAGCTGTGTTCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCTGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTCATCTCAGGAAGCCCTaGCTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCHLRKP*LQHPLL
Trigger: AAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATG...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGTGTGCATCTTGGAGTaGATCCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPVCILE*IRVCCC
Trigger: GCAGCAGCACACCCGGATTCACTCCAAGATGCACAC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTCACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGCCACCGCTGCTGCTaGTGCCGCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGHRCC*CRCLHL
Trigger: CAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTGGCC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLACCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTTGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTACCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRCCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTGGGATAGTGAGGTaGCGCCAGTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPSGIVR*RQSTAL
Trigger: AAGGGCTGTGGACTGGCGCCACCTCACTATCCCACT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGAGCTGCGGAGGCTGTaGTCACAAGAGAGCCTGACG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEELRRL*SQESLT
Trigger: CGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSLTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCTCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGGTCTATCACCAGTGTaGATTCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRGLSPV*IRVCCC
Trigger: GCAGCAGCACACCCGAATCCACACTGGTGATAGACC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGGTCTATCACCAGTGTaGATTCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSGLSPV*IRVCCC
Trigger: GCAGCAGCACACCCGAATCCACACTGGTGATAGACC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTARGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGAGGGGACTGGAAGTGTaGTGGTTGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCERGLEV*WLWRWL
Trigger: CAGCCACCGCCACAACCACCACACTTCCAGTCCCCT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGCTGCCCCAGGGGACTaGAAGTGTGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCAAPGD*KCGGCG
Trigger: GCCACAACCACCACACTTCCAGTCCCCTGGGGCAGC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAAAAGGAACACTGGGGTaGAGGGTTCGGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSKGTLG*RVRVAV
Trigger: GACAGCAACCCGAACCCTCCACCCCAGTGTTCCTTT...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCTCTCCGTGTGCATCTTaGAGTGAATCCGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSSPCAS*SESGCA
Trigger: AGCACACCCGGATTCACTCCAAGATGCACACGGAGA...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPRESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQRESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKRESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHTTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTGGATTCGGGTGTGCTaGTGCAGATGTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPWIRVC*CRCESW
Trigger: CCAGCTCTCACATCTGCAGCAGCACACCCGAATCCA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTGGATTCGGGTGTGCTaGTGCAGATGTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKWIRVC*CRCESW
Trigger: CCAGCTCTCACATCTGCAGCAGCACACCCGAATCCA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCCTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSLTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQLTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACCACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTTGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCCCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGCTGCTGCTGCTGCTaGTGCTGTGACGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGCCCC*CCDACE
Trigger: TTCACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTACCCTCCCTGGGGAGCTaGCCCAGGGGACTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLPSLGS*PRGLEV
Trigger: CACTTCCAGTCCCCTGGGGCAGCTCCCCAGGGAGGG...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGAGTGGGATAGTGAGGTaGCGCCAGTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCESGIVR*RQSTAL
Trigger: AAGGGCTGTGGACTGGCGCCACCTCACTATCCCACT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCATCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGTCTATCACCAGTGTaGATTCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQGLSPV*IRVCCC
Trigger: GCAGCAGCACACCCGAATCCACACTGGTGATAGACC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAAAGGAACACTGGGGTaGAGGGTTCGGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPKGTLG*RVRVAV
Trigger: GACAGCAACCCGAACCCTCCACCCCAGTGTTCCTTT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGAAAGGAACACTGGGGTaGAGGGTTCGGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKKGTLG*RVRVAV
Trigger: GACAGCAACCCGAACCCTCCACCCCAGTGTTCCTTT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTCAGTGCGGGCACTTGTaGGGCTTGATGGTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCQCGHL*GLMVSV
Trigger: CACGGAGACCATCAAGCCCCACAAGTGCCCGCACTG...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGGTCTATCACCAGTGTaGATTCGTGTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCGLSPV*IRVCCW
Trigger: CCAGCAGCACACACGAATCCACACTGGTGATAGACC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGTTTTCAATCTGCCCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCVFNLP*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGGCAGATTGAAAAC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAWVTDA*LCGVSC
Trigger: ACAGCTGACCCCACACAGTCAGGCATCTGTTACCCA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGACCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCATCTCAGGAAGCCCTaGCTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAHLRKP*LQHPLL
Trigger: AAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAATTCTGGGTAACAGATaGCTGACTGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRILGNR*LTVWGQ
Trigger: CTGACCCCACACAGTCAGGCATCTGTTACCCAGAAT...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCERESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATCTGTCCATTTCCTGTaGCGCAGTTCCCTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLASVHFL*RSSLRS
Trigger: GGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGGCCTGGGCCACCGCTaGTGCTGCTGCCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIGLGHR*CCCRCL
Trigger: CAAGCAGCGGCAGCAGCAGCAGCGGTGGCCCAGGCC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGGTGGCTGCTGCTGCTaGTGCTGCTGTGACGCCTGT +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELGGCCC*CCCDAC
Trigger: ACAGGCGTCACAGCAGCAGCAGCAGCAGCAGCCACC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTAGTGGGATAGTGAGGTaGCGCCAGTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCSGIVR*RQSTAL
Trigger: AAGGGCTGTGGACTGGCGCCACCTCACTATCCCACT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPLTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKLTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCACAGCAAGTTCGTGGTaGAGCCGGGAACTGAATCCA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELTASSW*SRELNP
Trigger: TGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGT...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPCRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGCTGCCCCAGGGGACTaGAAGTGTGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELAAPGD*KCGGCG
Trigger: GCCACAACCACCACACTTCCAGTCCCCTGGGGCAGC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTCTCCGTGTGCATCTTaGAGTGAATCCGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPSPCAS*SESGCA
Trigger: AGCACACCCGGATTCACTCCAAGATGCACACGGAGA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR TCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGTTTTCAATCTGCCCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKVFNLP*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGGCAGATTGAAAAC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGCAAACCAGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTG...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCCAAACCAGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTG...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCAAACCAGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTG...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGCCCGGGGGAAGAGCTaGGACAATCATGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLARGKS*DNHGSR
Trigger: TCGGCTCCCATGATTGTCTCAGCTCTTCCCCCGGGC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGTGTGTGTAGATAAGTaGGCCTCGAGAGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCVCVDK*ASREAA
Trigger: CGCAGCCTCTCTCGAGGCTCACTTATCTACACACAC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAACCACCTGTAGGGCTTaGGAGCCCGGGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLTTCRA*EPGGRA
Trigger: AGCTCTTCCCCCGGGCTCGCAAGCCCTACAGGTGGT...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCCTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPLTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTTGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTTGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELCCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGGTTGTGGCGGTGGCTaGTGCTGCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLGCGGG*CCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCCACCGCCACAACC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACAGTGGGATAGTGAGGTaGCGCCAGTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHSGIVR*RQSTAL
Trigger: AAGGGCTGTGGACTGGCGCCACCTCACTATCCCACT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGAGCTGCGGAGGCTGTaGTCACAAGAGAGCCTGACG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELELRRL*SQESLT
Trigger: CGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTALTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGTCTATCACCAGTGTaGATTCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGLSPV*IRVCCC
Trigger: GCAGCAGCACACCCGAATCCACACTGGTGATAGACC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000112425.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATCTCCGTGTGCATCTTaGAGTGAATCCGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLASPCAS*SESGCA
Trigger: AGCACACCCGGATTCACTCCAAGATGCACACGGAGA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGTCTATCACCAGTGTaGATTCGTGTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGLSPV*IRVCCW
Trigger: CCAGCAGCACACACGAATCCACACTGGTGATAGACC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
3UTR CAA 72 bp GGGGGCTGTTGGATAACACTATCAGCTCAGGATTCCTaGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTT +
Preference number: 4 (lower is better)
Translates to: GGCWITLSAQDS*ANQEQLRIRMV
Trigger: AACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTGAGCTGATAGTGTTATCCAACAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
3UTR CAA 72 bp CTGAATTCTCCCTTCTCTGCAAAAGACCGAATGGTATaGCAGAGAACACAGCTACCACAGCTCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LNSPFSAKDRMV*QRTQLPQLPEL
Trigger: GAGCTCTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGAGAATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGTTTTCAATCTGCCCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEVFNLP*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGGCAGATTGAAAAC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACCCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGTCTTGCCATCTTTCTaGTGGTCATCGTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRVLPSF*WSSSSP
Trigger: TGGGGATGACGATGACCATCAGAAAGATGGCAAGAC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAATTCTGGGTAACAGATaGCTGACTGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLAILGNR*LTVWGQ
Trigger: CTGACCCCACACAGTCAGGCATCTGTTACCCAGAAT...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTATTCTGGGTAACAGATaGCTGACTGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAILGNR*LTVWGQ
Trigger: CTGACCCCACACAGTCAGGCATCTGTTACCCAGAAT...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTCTGTCCATTTCCTGTaGCGCAGTTCCCTTCGCTCC +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHSVHFL*RSSLRS
Trigger: GGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTALTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTGCTGCTGCTGCCGCTaGTTGCACTTGCTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHCCCCR*LHLLLK
Trigger: CTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCAGCA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGTGGAGGGTTCGGGTTaGTGTCCCCACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIVEGSG*CPHHPL
Trigger: GAGGGGGTGGTGGGGACAGCAACCCGAACCCTCCAC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTTGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCCRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCATGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSCRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGHKRA*RGCDYQ
Trigger: TTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCATCTCAGGAAGCCCTaGCTCCAGCATCCGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELHLRKP*LQHPLL
Trigger: AAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGTGTGCATCTTGGAGTaGATCCGGGTGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLVCILE*IRVCCC
Trigger: GCAGCAGCACACCCGGATTCACTCCAAGATGCACAC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112427.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: PTLDKMCELPADPSLKHQMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATACACCGCTGCTGCTGCTaGCGCTGCTTGCACTTGCTG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIHRCCC*RCLHLL
Trigger: CAGCAAGTGCAAGCAGCGGCAGCAGCAGCAGCGGTG...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGGACAGTTAGCAAAGTaGGATAGTGAGGTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHGQLAK*DSEVAP
Trigger: TGGCGCCACCTCACTATCCCACTTTGCTAACTGTCC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RMKREKGKRPTLDKMCELHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATATGGTGGTTGTGGCGGTaGCTGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIWWLWR*LLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCCACCGCCACAACCACCA...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTAAAGGAACACTGGGGTaGAGGGTTCGGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELKGTLG*RVRVAV
Trigger: GACAGCAACCCGAACCCTCCACCCCAGTGTTCCTTT...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACGTTTTCAATCTGCCCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHVFNLP*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGGCAGATTGAAAAC...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTTGGGGTCAGCTGTTCTaGCTTGGACTCTGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELWGQLF*LGLCVH
Trigger: ATGGACACAGAGTCCAAGTCAGAACAGCTGACCCCA...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTACCAGGACCCCTTGATTaGCTCCCTTCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLPGPLD*LPSLLH
Trigger: GTGGAGAAGAGAAGGGAGTCAATCAAGGGGTCCTGG...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACCAAACCAGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTG...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLEIGKV*AAEAVV
Trigger: GACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LLCKRPNGIAENTATTAPDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACATTCTGGGTAACAGATaGCTGACTGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHILGNR*LTVWGQ
Trigger: CTGACCCCACACAGTCAGGCATCTGTTACCCAGAAT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATATGCTGCTGCTGCTGCTaGTGTGACGCCTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPICCCCC*CDACEA
Trigger: GGCTTCACAGGCGTCACAGCAGCAGCAGCAGCAGCA...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGACATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTTCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTTGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTACRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGGACTGGAAGTGTGGTaGTTGTGGCGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIGLEVW*LWRWLL
Trigger: CAGCAGCCACCGCCACAACCACCACACTTCCAGTCC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGCCAGGTGCTCCACCTaGATGGTGCTGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIARCST*MVLVVT
Trigger: TGTCACCACCAGCACCATCCAGGTGGAGCACCTGGC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGTTTTCAATCTGCCCTaGGACTGTGGGGATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELVFNLP*DCGDRR
Trigger: CCTTCTATCCCCACAGTCTCAGGGCAGATTGAAAAC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCAAACCAGGACCCCTTaGTTGACTCCCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELQTRTP*LTPFSS
Trigger: AGAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QDSLANQEQLRIRMVILRDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GKITHTLKPPLVTGESLADSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTATTCTGGGTAACAGATaGCTGACTGTGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELILGNR*LTVWGQ
Trigger: CTGACCCCACACAGTCAGGCATCTGTTACCCAGAAT...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELLTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAAGTGGGATAGTGAGGTaGCGCCAGTCCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPISGIVR*RQSTAL
Trigger: AAGGGCTGTGGACTGGCGCCACCTCACTATCCCACT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTATTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLLTLPS*RGQGPP
Trigger: AGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAA...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTATCTGCATCTCCGACTTaGAGTAGAAGGTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLSASPT*SRRSGS
Trigger: GCTCCCTGACCTTCTACTCCAAGTCGGAGATGCAGA...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTATACAACTATAGGGCTTaGCCCCTGAGTGGATCCGGA +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLYNYRA*PLSGSG
Trigger: TCCGGATCCACTCAGGGGCCAAGCCCTATAGTTGTA...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTTGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELCRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTTGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCCRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAAAGTCAAAGGAACACTaGGGTGGAGGGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLKSKEH*GGGFGL
Trigger: CAACCCGAACCCTCCACCCCAGTGTTCCTTTGACTT...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAAGGGAAAGTCTGAGCTaGGGAGGCTGTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIRESLS*GGCGHK
Trigger: CTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTACCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLPDCRL*RYKPWR
Trigger: ACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGG...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: SLLCKRPNGIAENTATTAMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGTCTTTATGATGCTCTaGCGGCTTATAGGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELVFMML*RLIGGQ
Trigger: TTGACCCCCTATAAGCCGGCAGAGCATCATAAAGAC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTATGTATATGCCCGACTaGAGATTGTGCAGGTATAAA +
Preference number: 4 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCMYMPD*RLCRYK
Trigger: TTTATACCTGCACAATCTGCAGTCGGGCATATACAT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTTGCAGGTATAAACCTTaGCGTGTTTCACTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELCRYKP*RVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCA...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGCTTGCACTTGCTGTTaGAGATCAGGAGGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIACTCC*RSGGLC
Trigger: ACACAACCCTCCTGATCTTCAACAGCAAGTGCAAGC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR GCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATACTCACAGCCCGGGTGTaGACATTTGTATGGTCTATC +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPILTARV*TFVWSI
Trigger: GATAGACCATACAAATGTGCACACCCGGGCTGTGAG...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTACATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATATGCAGATGTGAGAGCTaGCGGAAGGATTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPICRCES*RKDFSQ
Trigger: CTGTGAGAAATCCTTCCGCCAGCTCTCACATCTGCA...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR TCA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGACAGTTGTGGCACTTaGAGGGTTTATCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLDSCGT*RVYLCC
Trigger: ACAACAAAGATAAACCCTTCAAGTGCCACAACTGTC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CCA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATACATGAGTCCTGTAGATaGTACAGGAACCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIHESCR*YRNHCD
Trigger: ATCACAGTGGTTCCTGTACCATCTACAGGACTCATG...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 90 bp CACCACCTCCGCCTCCTTCCTCAGTTAGGGTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCTGTAGGGCTTGCGAGCCCGGGGGAA +
Preference number: 5 (lower is better)
Translates to: HHLRLLPQLGLTLPS*RGQGPPVGLASPGE
Trigger: TTCCCCCGGGCTCGCAAGCCCTACAGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAGGAGGCGGAGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 90 bp CCGGCACCCAGGGTCACACAGCAAGTTCGTGGTGGAGCCGGGAACTaGATCCATGAGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGTT +
Preference number: 5 (lower is better)
Translates to: PAPRVTQQVRGGAGN*IHEPKALSISCAAV
Trigger: AACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGTGTGACCCTGGGTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 90 bp CAGGGTCACACAGCAAGTTCGTGGTGGAGCCGGGAACTGAATCCATaGGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGTTCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: QGHTASSWWSRELNP*AQGSVHFLCRSSLR
Trigger: GCGAAGGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGTGTGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSSLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAAAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQSLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GATAGCGAGACTGAGTATATAGGCCCTTGGTTGGCAGAGAAGGAAGGAGGCTGTAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: DSETEYIGPWLAEKEGGCSLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...ACAGCCTCCTTCCTTCTCTGCCAACCAAGGGCCTATATACTCAGTCTCGCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: LLCKRPNGIAENTATTAPGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LLCKRPNGIAENTATTAPSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLCKRPNGIAENTATTAPSLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 90 bp AATAGGGAAAGTCTGAGCTGCGGAGGCTGTGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAAACCAGGACCCGCAGTCATGAGTCC +
Preference number: 5 (lower is better)
Translates to: NRESLSCGGCGHKRA*RGCDYQTRTRSHES
Trigger: GGACTCATGACTGCGGGTCCTGGTTTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112424.2
CDS GCA 90 bp TCTGTCCATTTCCTGTGCCGCAGTTCCCTTCGCTCCTGTAGGTCTTaGCATCTTTCTGATGGTCATCGTCATCCCCAGGGGCAAGGACGT +
Preference number: 5 (lower is better)
Translates to: SVHFLCRSSLRSCRS*HLSDGHRHPQGQGR
Trigger: ACGTCCTTGCCCCTGGGGATGACGATGACCATCAGAAAGATGGCAAGACCTACAGGAGCGAAGGGAACTGCGGCACAGGAAATGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS CCA 90 bp GGCTTGCGAGCCCGGGGGAAGAGCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGATGCCTGACT +
Preference number: 5 (lower is better)
Translates to: GLRARGKSRSHESCR*YRNHCDILGNRCLT
Trigger: AGTCAGGCATCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGCTCTTCCCCCGGGCTCGCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152752.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSSIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLASLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SLLCKRPNGIAENTATTAGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLASLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LRMKREKGKRPTLDKMCESLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGTGGAGGGTTCGGGTaGCTGTCCCCACCACCCCCT +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGGGFG*LSPPPP
Trigger: AGGGGGTGGTGGGGACAGCAACCCGAACCCTCCACC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSSIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGAAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRSIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGCCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: LSHQEELTKEGPGLLPVPPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...CGGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCSLGLG*SLGLSL
Trigger: CAGGCTCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCGTCAGCTGTTCTGACTaGGACTCTGTGTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSVSCSD*DSVSML
Trigger: CAGCATGGACACAGAGTCCAAGTCAGAACAGCTGAC...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCCCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCACCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCAGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLAVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAACTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQLPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRSIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELSLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 90 bp CCACCTCTGAGAACAGGAGACTCCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGATGCCTGACT +
Preference number: 5 (lower is better)
Translates to: PPLRTGDSRSHESCR*YRNHCDILGNRCLT
Trigger: AGTCAGGCATCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGGAGTCTCCTGTTCTCAGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGGTCAGCTGTTCTGACTaGGACTCTGTGTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKVSCSD*DSVSML
Trigger: CAGCATGGACACAGAGTCCAAGTCAGAACAGCTGAC...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGCCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGCCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGCTTCCTTCTCTGTTATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: SFLLCYLGGPATSLPSTSMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...TGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATAACAGAGAAGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGAAAAGCCATGCCTGAGACCCAAGGAGCTGGAGACAGGACTTGTCAAGGAAGATGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: RKAMPETQGAGDRTCQGRCLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...TCTTCCTTGACAAGTCCTGTCTCCAGCTCCTTGGGTCTCAGGCATGGCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTTGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: SLLCKRPNGIAENTATTACCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGGCCTGGGCTTGAGCTaGGGCCTGGGCTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLGLGLS*GLGLSL
Trigger: CAAGCTCAAGCCCAGGCCCAAGCTCAAGCCCAGGCC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGGCCTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIGLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAGGCC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCACCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLAPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGACCAAACCAGGACCCCTaGATTGACTCCCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRPNQDP*IDSLLF
Trigger: GAAGAGAAGGGAGTCAATCAAGGGGTCCTGGTTTGG...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGCTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQLPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCCTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELLPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHSIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: SLLCKRPNGIAENTATTAPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCACCCGGGTGTGCACATTaGTATGGTCTATCACCAGTG +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLAPGCAH*YGLSPV
Trigger: CACTGGTGATAGACCATACAAATGTGCACACCCGGG...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: LLCKRPNGIAENTATTAPMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTCCCACCAAGAAGAGTTGACAAAGGAGGGACCAGGACTTCTCCCCGTTCCTCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: TFPPRRVDKGGTRTSPRSSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...GGAACGGGGAGAAGTCCTGGTCCCTCCTTTGTCAACTCTTCTTGGTGGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CCCACACTGGATAAGATGTGTGAGCTCCCAGCGGATCCTTCTCTCAAGCACCAATCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: PTLDKMCELPADPSLKHQSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...TTGGTGCTTGAGAGAAGGATCCGCTGGGAGCTCACACATCTTATCCAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCTGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LLCKRPNGIAENTATTAPCLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...GGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTTGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 90 bp GGATGTGATTACCAAACCAGGACCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGATGCCTGACT +
Preference number: 5 (lower is better)
Translates to: GCDYQTRTRSHESCR*YRNHCDILGNRCLT
Trigger: AGTCAGGCATCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGGTCCTGGTTTGGTAATCACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112424.2
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCCCTTCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLLCKRPNGIAENTATTALPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...AGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGAATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: LRMKREKGKRPTLDKMCEMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGTGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LRMKREKGKRPTLDKMCECLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...CTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRCLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp GGAAAAATAACTCATACTCTTAAGCCACCCTTGGTCACCGGGGAATCTCTGGCATGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GKITHTLKPPLVTGESLACLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...TGCCAGAGATTCCCCGGTGACCAAGGGTGGCTTAAGAGTATGAGTTATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAAGCTTGGGCCTGGGCTaGAGCTTGGGCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HESAIAPLQIKRYSHHPISLGLG*SLGLGL
Trigger: CAAGCCCAGGCCCAAGCTCAAGCCCAGGCCCAAGCT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGTTGACGCTACCTTCTaGGAGAGGTCAGGGACCACC +
Preference number: 5 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLVDATF*ERSGTT
Trigger: GGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAAC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ACTTTGAGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: TLRMKREKGKRPTLDKMCMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...ACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TATCTGGGAGGGCCAGCCACTAGTCTTCCATCAACCTCAACTTTGAGGATGAAGTCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: YLGGPATSLPSTSTLRMKSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...CTTCATCCTCAAAGTTGAGGTTGATGGAAGACTAGTGGCTGGCCCTCCCAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp AGGATGAAGAGAGAGAAAGGTAAGCGCCCCACACTGGATAAGATGTGTGAGCTCTCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: RMKREKGKRPTLDKMCELSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...GAGCTCACACATCTTATCCAGTGTGGGGCGCTTACCTTTCTCTCTCTTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TCTCTGCAAAAGACCGAATGGTATTGCAGAGAACACAGCTACCACAGCTCCCAGTCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: SLQKTEWYCREHSYHSSQSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...CTGGGAGCTGTGGTAGCTGTGTTCTCTGCAATACCATTCGGTCTTTTGCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTGTCAGCTGTTCTGACTaGGACTCTGTGTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELVSCSD*DSVSML
Trigger: CAGCATGGACACAGAGTCCAAGTCAGAACAGCTGAC...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACCTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHLPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CAGGATTCCTTGGCCAATCAGGAGCAGCTGAGAATAAGGATGGTTATCTTGCGATCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: QDSLANQEQLRIRMVILRSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...TCGCAAGATAACCATCCTTATTCTCAGCTGCTCCTGATTGGCCAAGGAATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATAGTCATCACCCAATATAAAGTGAGACCACGGAAGGGGAAGAAAATGGCTCACTGCTTGCACTTGCTGTaGAAGATCAGGAGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: IVITQYKVRPRKGKKMAHCLHLL*KIRRVV
Trigger: CACAACCCTCCTGATCTTCAACAGCAAGTGCAAGCA...GTGAGCCATTTTCTTCCCCTTCCGTGGTCTCACTTTATATTGGGTGATGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTATGCTGCTGCCGCTGCTaGCACTTGCTGTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLCCCRC*HLLLKI
Trigger: GATCTTCAACAGCAAGTGCAAGCAGCGGCAGCAGCA...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGTCAGCTGTTCTGACTaGGACTCTGTGTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLVSCSD*DSVSML
Trigger: CAGCATGGACACAGAGTCCAAGTCAGAACAGCTGAC...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTCTTCCTCAGTTAGGGTaGACGCTACCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELLPQLG*TLPSWR
Trigger: TCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAG...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HESAIAPLQIKRYSHHPISIRFF*RPRGGL
Trigger: TAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp ATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTAGAGCTTATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: ICSFTGKHRTEGWWHLELMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...AAGCTCTAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAGTCAGCTGTTCTGACTaGGACTCTGTGTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIVSCSD*DSVSML
Trigger: CAGCATGGACACAGAGTCCAAGTCAGAACAGCTGAC...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp CATGAATCAGCTATTGCCCCCTTACAAATAAAAAGGTATAGTCATCACCCAATAATGCCCGACTGCAGATaGTGCAGGTATAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: HESAIAPLQIKRYSHHPIMPDCR*CRYKPW
Trigger: CCAAGGTTTATACCTGCACAATCTGCAGTCGGGCAT...TATTGGGTGATGACTATACCTTTTTATTTGTAAGGGGGCAATAGCTGATTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS-3UTR CAA 90 bp TGCAAAATCTGTTCTTTTACAGGTAAGCATAGAACGGAAGGCTGGTGGCATTTATCAGGAGGGTTGTGTTaGCGCATATGTTTCATAAGG +
Preference number: 5 (lower is better)
Translates to: CKICSFTGKHRTEGWWHLSGGLC*RICFIR
Trigger: CCTTATGAAACATATGCGCAAACACAACCCTCCTGA...TAAATGCCACCAGCCTTCCGTTCTATGCTTACCTGTAAAAGAACAGATTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CAA 90 bp GGGTCATTCATCTCAGGAAGCCCTGACTCCAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTAGGAGGAGCCACAGTGCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: GSFISGSPDSSIRFF*RPRGGLGGATVPPP
Trigger: TGGAGGTGGCACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATGAATGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 72 bp GGCAAGGACGTAAGGGTCATTCATCTCAGGAAGCCCTaGCTCCAGCATCCGCTTCTTCTTGCGGCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: GKDVRVIHLRKP*LQHPLLLAAPR
Trigger: CCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGATGAATGACCCTTACGTCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 72 bp CGCCTCCTTCCTCAGTTAGGGTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCTGTAGGGCTTGCGAGC +
Preference number: 6 (lower is better)
Translates to: RLLPQLGLTLPS*RGQGPPVGLAS
Trigger: GCTCGCAAGCCCTACAGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 72 bp CGCCTCCTTCCTCAGTTAGGGTTGACGCTACCTTCTTaGAGAGGTCAGGGACCACCTGTAGGGCCGCAGTCA +
Preference number: 6 (lower is better)
Translates to: RLLPQLGLTLPS*RGQGPPVGPQS
Trigger: TGACTGCGGCCCTACAGGTGGTCCCTGACCTCTCCAAGAAGGTAGCGTCAACCCTAACTGAGGAAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000054553.11
CDS CAA 72 bp ATCTCAGGAAGCCCTGACTCCAGCATCCGCTTCTTCTaGCGGCCCCGAGGAGGTTTAGGAGGAGCCACAGTG +
Preference number: 6 (lower is better)
Translates to: ISGSPDSSIRFF*RPRGGLGGATV
Trigger: CACTGTGGCTCCTCCTAAACCTCCTCGGGGCCGCAAGAAGAAGCGGATGCTGGAGTCAGGGCTTCCTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 72 bp AGTCTGAGCTGCGGAGGCTGTGGTCACAAGAGAGCCTaGCGGGGATGTGATTACCAAACCAGGACCCGCAGT +
Preference number: 6 (lower is better)
Translates to: SLSCGGCGHKRA*RGCDYQTRTRS
Trigger: ACTGCGGGTCCTGGTTTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112424.2
CDS TCA 72 bp ACAGCAAGTTCGTGGTGGAGCCGGGAACTGAATCCATaGGCCCAAGGCTCTGTCCATTTCCTGTGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: TASSWWSRELNP*AQGSVHFLCRS
Trigger: ACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGTTCCCGGCTCCACCACGAACTTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046064.17
ENSMUST00000112428.8
CDS TCA 72 bp CGGAGGCTGTGGTCACAAGAGAGCCTGACGGGGATGTaGTTACCAAACCAGGACCCCTTGATTGACTCCCTT +
Preference number: 6 (lower is better)
Translates to: RRLWSQESLTGM*LPNQDPLIDSL
Trigger: AAGGGAGTCAATCAAGGGGTCCTGGTTTGGTAATCACATCCCCGTCAGGCTCTCTTGTGACCACAGCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS TCA 72 bp GCTGAGACAATCATGGGAGCCGAAATAGGGAAAGTCTaGGCTGCGGAGGCTGTGGTCACAAGAGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: AETIMGAEIGKV*AAEAVVTREPD
Trigger: GTCAGGCTCTCTTGTGACCACAGCCTCCGCAGCTCAGACTTTCCCTATTTCGGCTCCCATGATTGTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 72 bp GCCCGGGGGAAGAGCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGA +
Preference number: 6 (lower is better)
Translates to: ARGKSRSHESCR*YRNHCDILGNR
Trigger: TCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGCTCTTCCCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152752.8
CDS TCA 72 bp ACAGGAACCACTGTGATATTCTGGGTAACAGATGCCTaGCTGTGTGGGGTCAGCTGTTCTGACTTGGACTCT +
Preference number: 6 (lower is better)
Translates to: TGTTVIFWVTDA*LCGVSCSDLDS
Trigger: AGAGTCCAAGTCAGAACAGCTGACCCCACACAGTCAGGCATCTGTTACCCAGAATATCACAGTGGTTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
ENSMUST00000152752.8
CDS CCA 72 bp AGAACAGGAGACTCCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGA +
Preference number: 6 (lower is better)
Translates to: RTGDSRSHESCR*YRNHCDILGNR
Trigger: TCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGGAGTCTCCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000046064.17
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8
CDS CCA 72 bp TACCAAACCAGGACCCGCAGTCATGAGTCCTGTAGATaGTACAGGAACCACTGTGATATTCTGGGTAACAGA +
Preference number: 6 (lower is better)
Translates to: YQTRTRSHESCR*YRNHCDILGNR
Trigger: TCTGTTACCCAGAATATCACAGTGGTTCCTGTACCATCTACAGGACTCATGACTGCGGGTCCTGGTTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112424.2
CDS GCA 72 bp GGTATGTTTCTGATGTATATGCCCGACTGCAGATTGTaGAGGTATAAACCTTGGCGTGTTTCACTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: GMFLMYMPDCRL*RYKPWRVSLCV
Trigger: CACACACAGTGAAACACGCCAAGGTTTATACCTGCACAATCTGCAGTCGGGCATATACATCAGAAACATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000046064.17
ENSMUST00000054553.11
ENSMUST00000084275.12
ENSMUST00000088308.10
ENSMUST00000112424.2
ENSMUST00000112425.8
ENSMUST00000112427.8
ENSMUST00000112428.8