Pregenerated sensors for ZFP382 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074220Ensembl transcript IDs: ENSMUST00000098596.11, ENSMUST00000153792.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTaGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTACATAATGGG | + |
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Preference number: 1 (lower is better) Translates to: LGGRGRRISMSLRPA*SMHQVLGQPSLHNG Trigger: CCCATTATGTAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| 3UTR CCA 72 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTaGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: RGRRISMSLRPA*SMHQVLGQPSL Trigger: TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCTTGTGGTGCCTGGTaGGGGTTGCCTTCTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQPCGAW*GLPSGG Trigger: TCCGCCAGAAGGCAACCCTCACCAGGCACCACAAGG...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCTGTGTGCGCCTTGTaGTGCCTGGTGAGGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQPVCAL*CLVRVA Trigger: GGCAACCCTCACCAGGCACCACAAGGCGCACACAGG...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR GCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGGTGTGCGCCTTGTGGTaGCTGGTGAGGGTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQVCALW*LVRVAF Trigger: GAAGGCAACCCTCACCAGGCACCACAAGGCGCACAC...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGTGGGTCTTCTGGTGCTaGGCGAGGTCCCATTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQWVFWC*ARSHSE Trigger: CTCTGAATGGGACCTCGCTCAGCACCAGAAGACCCA...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR GCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTAGCTTTCTCCCCTGTGTaGGCCTTGTGGTGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLAFSPV*ALWCLV Trigger: CACCAGGCACCACAAGGCGCACACAGGGGAGAAAGC...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTACCACGGTCACGTCCTTaGATGACACTGGTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLPRSRP*MTLVPW Trigger: CCAAGGGACCAGTGTCATTCAAGGACGTGACCGTGG...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGACGAGCCTCCTTGTCTaGGCTCCTCTTTTGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRRISMSLRPAWSMTSLLV*APLLEM Trigger: CATTTCCAAAAGAGGAGCTCAGACAAGGAGGCTCGT...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGTTCTGTAGTGCACAGTaGGGATTGCCTTCTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQFCSAQ*GLPSGG Trigger: TCCGCCAGAAGGCAATCCTCACTGTGCACTACAGAA...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCTCCTCTTTTGGAAATaGGAAGAGTCCAGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQLLFWK*EESRPG Trigger: GCCAGGCCTGGACTCTTCCCATTTCCAAAAGAGGAG...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTGGTCACGTCCTTGAATaGCACTGGTCCCTTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: RGRRISMSLRPAWSMHQVGHVLE*HWSLGH Trigger: ATGTCCAAGGGACCAGTGTCATTCAAGGACGTGACC...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGATTCCACTCCTGTCATaGGGAAGGAGCTGTCACATT | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRRISMSLRPAWSMIPLLS*GRSCHI Trigger: AATGTGACAGCTCCTTCCTCATGACAGGAGTGGAAT...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTAGGATCGAGGCGGGATaGGTTTTCTCCTGCTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: RGRRISMSLRPAWSMHQVRIEAG*VFSCFE Trigger: TTCGAAGCAGGAGAAAACGCATCCCGCCTCGATCCT...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGGTGAGTGTTGTCTTCTaGATAAACGCCTTCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRRISMSLRPAWSMVSVVF*INAFPH Trigger: GTGTGGGAAGGCGTTTATCCAGAAGACAACACTCAC...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTACTTCCGATTTGTTTATaGAGGATCGAGGCGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLLPICL*RIEAGC Trigger: GCATCCCGCCTCGATCCTCCATAAACAAATCGGAAG...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR GCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCAAACACTGACTTTCTaGAAAGGAGCTCCCCATATT | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRRISMSLRPAWSMQTLTF*KGAPHI Trigger: AATATGGGGAGCTCCTTTGCAGAAAGTCAGTGTTTG...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTATCTGAGCTCCTCTTTTaGAAATGGGAAGAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLSELLF*KWEESR Trigger: CCTGGACTCTTCCCATTTCCAAAAGAGGAGCTCAGA...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTATTCAAACCTCTGCTCTaGAATCTGGGTCTTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLFKPLL*NLGLLV Trigger: CACCAGAAGACCCAGATTCCAGAGCAGAGGTTTGAA...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTGTGAGCTCTGCCATGTaGAAATTCCACTCCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGRRISMSLRPAWSMHQVVSSAM*KFHSCH Trigger: ATGACAGGAGTGGAATTTCCACATGGCAGAGCTCAC...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGACTGGGGACAGCCATTaGACTTTTCTCCTGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQTGDSH*TFLLYV Trigger: TACATACAGGAGAAAAGTCCAATGGCTGTCCCCAGT...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTAGTGCATAACAAACACTaGCTTTCTGCAAAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLVHNKH*LSAKEL Trigger: GAGCTCCTTTGCAGAAAGTCAGTGTTTGTTATGCAC...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGGAAATCCCACAGAGATaGAATGACAGTAGTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LGGRGRRISMSLRPAWSMEIPQR*NDSSFL Trigger: TAGAAAACTACTGTCATTTCATCTCTGTGGGATTTC...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTAATGGTTTCTGTCTTGTaGGTTTTCTGGTGGGTAATG | + |
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Preference number: 4 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLMVSVL*VFWWVM Trigger: CATTACCCACCAGAAAACTCACAAGACAGAAACCAT...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTACCCAACTTCCCCATTaGAGGGTTTATATCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: RGRRISMSLRPAWSMHQVTQLPH*RVYIST Trigger: AGTAGAGATATAAACCCTGCAATGGGGAAGTTGGGT...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGACTCAAATAGCGTTTTaGAAACAACACGGTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQTQIAF*KQHGSC Trigger: GCAAGAACCGTGTTGTTTCCAAAACGCTATTTGAGT...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGATAAGATCATGTGGATaGATACCAAGGTCTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: RISMSLRPAWSMHQVLGQIRSCG*IPRSDF Trigger: AAAGTCAGACCTTGGTATTCATCCACATGATCTTAT...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTTCAGGTTTTGTTATGTaGAATCCCACAGAGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: RGRRISMSLRPAWSMHQVSGFVM*NPTEMK Trigger: TTTCATCTCTGTGGGATTTCACATAACAAAACCTGA...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 90 bp | GTTTGCGGGAGACGAGCCTCCTTGTCTGAGCTCCTCTTTTGGAAATaGGAAGAGTCCAGGCCTGGCTCGGCCTCTCGGTTTCCTCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VCGRRASLSELLFWK*EESRPGSASRFPPR Trigger: CCGGGGAGGAAACCGAGAGGCCGAGCCAGGCCTGGACTCTTCCCATTTCCAAAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCCGCAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098596.11 ENSMUST00000153792.2 |
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| CDS-3UTR CAA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGTCCCCTGTGTGCGCCTaGTGGTGCCTGGTGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: RISMSLRPAWSMHQVLGQSPVCA*WCLVRV Trigger: AACCCTCACCAGGCACCACAAGGCGCACACAGGGGA...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 90 bp | GTTGAGGTTTGCGGGAGACGAGCCTCCTTGTCTGAGCTCCTCTTTTaGAAATGGGAAGAGTCCAGGCCTGGCTCGGCCTCTCGGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VEVCGRRASLSELLF*KWEESRPGSASRFP Trigger: AGGAAACCGAGAGGCCGAGCCAGGCCTGGACTCTTCCCATTTCCAAAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCCGCAAACCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098596.11 ENSMUST00000153792.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGGGGAGACGAGCCTCCTaGTCTGAGCTCCTCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LGGRGRRISMSLRPAWSMGRRAS*SELLFW Trigger: CCAAAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCC...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGGATGGAGGGTCAGGGTaGTCTTCTGGCAGAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: RISMSLRPAWSMHQVLGQDGGSG*SSGRRT Trigger: AGTCCTTCTGCCAGAAGACAACCCTGACCCTCCATC...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCAGAGCCCTTCCGATTaGTTTATGGAGGATCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RISMSLRPAWSMHQVLGQQSPSD*FMEDRG Trigger: GCCTCGATCCTCCATAAACAAATCGGAAGGGCTCTG...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGGCTTCGAAGTCAGGATaGATCCCTCCCATTCTTTAC | + |
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Preference number: 5 (lower is better) Translates to: LGGRGRRISMSLRPAWSMASKSG*IPPILY Trigger: GTAAAGAATGGGAGGGATCAATCCTGACTTCGAAGC...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS GCA 90 bp | GAGCTCAGAGCCCTTCCGATTTGTTTATGGAGGATCGAGGCGGGATaGGTTTTCTCCTGCTTCGAAGTCAGGATTGATCCCTCCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: ELRALPICLWRIEAG*VFSCFEVRIDPSHS Trigger: AGAATGGGAGGGATCAATCCTGACTTCGAAGCAGGAGAAAACGCATCCCGCCTCGATCCTCCATAAACAAATCGGAAGGGCTCTGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS GCA 90 bp | CTTCCGATTTGTTTATGGAGGATCGAGGCGGGATGCGTTTTCTCCTaGTTCGAAGTCAGGATTGATCCCTCCCATTCTTTACTGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: LPICLWRIEAGCVFS*FEVRIDPSHSLLPP Trigger: GGGTGGCAGTAAAGAATGGGAGGGATCAATCCTGACTTCGAAGCAGGAGAAAACGCATCCCGCCTCGATCCTCCATAAACAAATCGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCTAGATAGCTCTGACTaGGAAAGATTCTCTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RISMSLRPAWSMHQVLGQLDSSD*ERFSLS Trigger: GGACAGAGAGAATCTTTCCAAGTCAGAGCTATCTAG...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCACCCAACTTCCCCATaGCAGGGTTTATATCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: RGRRISMSLRPAWSMHQVHPTSP*QGLYLY Trigger: GTAGAGATATAAACCCTGCAATGGGGAAGTTGGGTG...AACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | TTGGGAGGCAGAGGCAGGCGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGAGGAGCTCCCCATATTaGTTGTATGAAGAACATTTC | + |
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Preference number: 5 (lower is better) Translates to: LGGRGRRISMSLRPAWSMRSSPY*LYEEHF Trigger: GAAATGTTCTTCATACAACAAATATGGGGAGCTCCT...CATAGACCAGGCTGGCCTCAAACTCATAGAGATCCGCCTGCCTCTGCCTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS TCA 90 bp | CGCCTCCTCTGTGAGCTCTGCCATGTGGAAATTCCACTCCTGTCATaGGGAAGGAGCTGTCACATTTATTATATTCAAACCTCTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RLLCELCHVEIPLLS*GRSCHIYYIQTSAL Trigger: CAGAGCAGAGGTTTGAATATAATAAATGTGACAGCTCCTTCCTCATGACAGGAGTGGAATTTCCACATGGCAGAGCTCACAGAGGAGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 90 bp | CATGAGGAAGGAGCTGTCACATTTATTATATTCAAACCTCTGCTCTaGAATCTGGGTCTTCTGGTGCTGAGCGAGGTCCCATTCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HEEGAVTFIIFKPLL*NLGLLVLSEVPFRA Trigger: AGCTCTGAATGGGACCTCGCTCAGCACCAGAAGACCCAGATTCCAGAGCAGAGGTTTGAATATAATAAATGTGACAGCTCCTTCCTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | CGGATCTCTATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGAGCTCCCCATATTTGTaGTATGAAGAACATTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RISMSLRPAWSMHQVLGQSSPYL*YEEHFF Trigger: GAAGAAATGTTCTTCATACAACAAATATGGGGAGCT...CTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCATAGAGATCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 90 bp | TTTACTGTAGTTGAAGTTCCCGCCTCCTCTGTGAGCTCTGCCATGTaGAAATTCCACTCCTGTCATGAGGAAGGAGCTGTCACATTTATT | + |
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Preference number: 5 (lower is better) Translates to: FTVVEVPASSVSSAM*KFHSCHEEGAVTFI Trigger: AATAAATGTGACAGCTCCTTCCTCATGACAGGAGTGGAATTTCCACATGGCAGAGCTCACAGAGGAGGCGGGAACTTCAACTACAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS-3UTR CAA 90 bp | ATGAGTTTGAGGCCAGCCTGGTCTATGCACCAAGTTCTGGGCCAGCCAAGTCTATCCTTAATTAGCTTCTaGTGCTTGATGATTACGATC | + |
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Preference number: 5 (lower is better) Translates to: MSLRPAWSMHQVLGQPSLSLISF*CLMITI Trigger: GATCGTAATCATCAAGCACAAGAAGCTAATTAAGGA...TAGACTTGGCTGGCCCAGAACTTGGTGCATAGACCAGGCTGGCCTCAAACTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 72 bp | TGCGGGAGACGAGCCTCCTTGTCTGAGCTCCTCTTTTaGAAATGGGAAGAGTCCAGGCCTGGCTCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CGRRASLSELLF*KWEESRPGSAS Trigger: AGAGGCCGAGCCAGGCCTGGACTCTTCCCATTTCCAAAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098596.11 ENSMUST00000153792.2 |
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| CDS CAA 72 bp | CTGGTCCCTGTAAGGGCACAGTGTGGCAGTTCATCCTaGGACATGGCGTTGAGGTTTGCGGGAGACGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVPVRAQCGSSS*DMALRFAGDEP Trigger: AGGCTCGTCTCCCGCAAACCTCAACGCCATGTCCAAGGATGAACTGCCACACTGTGCCCTTACAGGGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153792.2 |
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| CDS CAA 72 bp | ACGTCCTTGAATGACACTGGTCCCTTGGACATGGCGTaGAGGTTTGCGGGAGACGAGCCTCCTTGTCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TSLNDTGPLDMA*RFAGDEPPCLS Trigger: GCTCAGACAAGGAGGCTCGTCTCCCGCAAACCTCAACGCCATGTCCAAGGGACCAGTGTCATTCAAGGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CAA 90 bp | GTCCCTGTAAGGGCACAGTGTGGCAGTTCATCCTTGGACATGGCGTaGAGGTTTGCGGGAGACGAGCCTCCTTGTCTGAGCTCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VPVRAQCGSSSLDMA*RFAGDEPPCLSSSF Trigger: AAAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCCGCAAACCTCAACGCCATGTCCAAGGATGAACTGCCACACTGTGCCCTTACAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153792.2 |
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| CDS GCA 72 bp | GTGTGGCAGTTCATCCTTGGACATGGCGTTGAGGTTTaGGGGAGACGAGCCTCCTTGTCTGAGCTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VWQFILGHGVEV*GRRASLSELLF Trigger: AAAGAGGAGCTCAGACAAGGAGGCTCGTCTCCCGCAAACCTCAACGCCATGTCCAAGGATGAACTGCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153792.2 |
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| CDS TCA 72 bp | GGCGGGATGCGTTTTCTCCTGCTTCGAAGTCAGGATTaGTCCCTCCCATTCTTTACTGCCACCCAACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GGMRFLLLRSQD*SLPFFTATQLP Trigger: GGGAAGTTGGGTGGCAGTAAAGAATGGGAGGGATCAATCCTGACTTCGAAGCAGGAGAAAACGCATCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CCA 72 bp | GTTGAAGTTCCCGCCTCCTCTGTGAGCTCTGCCATGTaGAAATTCCACTCCTGTCATGAGGAAGGAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VEVPASSVSSAM*KFHSCHEEGAV Trigger: GACAGCTCCTTCCTCATGACAGGAGTGGAATTTCCACATGGCAGAGCTCACAGAGGAGGCGGGAACTTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS GCA 72 bp | GCCCTTCCGATTTGTTTATGGAGGATCGAGGCGGGATaGGTTTTCTCCTGCTTCGAAGTCAGGATTGATCCC | + |
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Preference number: 6 (lower is better) Translates to: ALPICLWRIEAG*VFSCFEVRIDP Trigger: GGGATCAATCCTGACTTCGAAGCAGGAGAAAACGCATCCCGCCTCGATCCTCCATAAACAAATCGGAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS GCA 72 bp | GCTTCGAAGTCAGGATTGATCCCTCCCATTCTTTACTaGCACCCAACTTCCCCATTGCAGGGTTTATATCTC | + |
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Preference number: 6 (lower is better) Translates to: ASKSGLIPPILY*HPTSPLQGLYL Trigger: GAGATATAAACCCTGCAATGGGGAAGTTGGGTGGCAGTAAAGAATGGGAGGGATCAATCCTGACTTCGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS GCA 72 bp | TGTTTATGGAGGATCGAGGCGGGATGCGTTTTCTCCTaGTTCGAAGTCAGGATTGATCCCTCCCATTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CLWRIEAGCVFS*FEVRIDPSHSL Trigger: TAAAGAATGGGAGGGATCAATCCTGACTTCGAAGCAGGAGAAAACGCATCCCGCCTCGATCCTCCATAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS TCA 72 bp | CTCGTCCATCTGAGAGCTGGGGTGCATAACAAACACTaGCTTTCTGCAAAGGAGCTCCCCATATTTGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LVHLRAGVHNKH*LSAKELPIFVV Trigger: TACAACAAATATGGGGAGCTCCTTTGCAGAAAGTCAGTGTTTGTTATGCACCCCAGCTCTCAGATGGACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CAA 72 bp | TCACCAAAACTTCCTCCTCTTCTAGATAGCTCTGACTaGGAAAGATTCTCTCTGTCCACAGCTCCTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPKLPPLLDSSD*ERFSLSTAPLL Trigger: AAGGAGAGGAGCTGTGGACAGAGAGAATCTTTCCAAGTCAGAGCTATCTAGAAGAGGAGGAAGTTTTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS CAA 72 bp | ACAAACACTGACTTTCTGCAAAGGAGCTCCCCATATTaGTTGTATGAAGAACATTTCTTCTCCATAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: TNTDFLQRSSPY*LYEEHFFSIRS Trigger: TGATCTTATGGAGAAGAAATGTTCTTCATACAACAAATATGGGGAGCTCCTTTGCAGAAAGTCAGTGTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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| CDS TCA 72 bp | CTTCTCCATAAGATCATGTGGATGAATACCAAGGTCTaGCTTTTCAAAAAGAGTGATGTCATCTTTACTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLHKIMWMNTKV*LFKKSDVIFTV Trigger: TACAGTAAAGATGACATCACTCTTTTTGAAAAGTCAGACCTTGGTATTCATCCACATGATCTTATGGAGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098596.11 |
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