Pregenerated sensors for ZFP36L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059334Ensembl transcript IDs: ENSMUST00000071711.4
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCAAGGGCCGCCCCAGCAGCCATGGCAGCTCCAAGAGCGAGGGCTaGCCCAGGAGTGAGGGCAGCTCCAGTAGCCATGGCAGCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SKGRPSSHGSSKSEG*PRSEGSSSSHGSPS Trigger: ACTGGGGCTGCCATGGCTACTGGAGCTGCCCTCACTCCTGGGGCAGCCCTCGCTCTTGGAGCTGCCATGGCTGCTGGGGCGGCCCTTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 90 bp | GAGCAGTCCTCGGTGAGGCTGGAGGCACTGGAACTGGGAGCCTGGTaGCCGAGCACTTGGGGGTCGCTGGAAGATGGTGGTGGAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: EQSSVRLEALELGAW*PSTWGSLEDGGGAV Trigger: CACTGCTCCACCACCATCTTCCAGCGACCCCCAAGTGCTCGGCCACCAGGCTCCCAGTTCCAGTGCCTCCAGCCTCACCGAGGACTGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 90 bp | ATGTTCGCCATTCCGCGGGTGGATCTGCGACACCGCGTTAGCCTCTaGGGGCTCATGGGGAGCTTCCCAGGACACCGCACCAGTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: MFAIPRVDLRHRVSL*GLMGSFPGHRTSCP Trigger: GGGGCAACTGGTGCGGTGTCCTGGGAAGCTCCCCATGAGCCCTCAGAGGCTAACGCGGTGTCGCAGATCCACCCGCGGAATGGCGAACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 90 bp | GCCAGGGAGCTCGAGCCGCTCACCTTCTGTGGCTTAGGCTTCTGCTaGAGGCTATGTTCGCCATTCCGCGGGTGGATCTGCGACACCGCG | + |
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Preference number: 5 (lower is better) Translates to: ARELEPLTFCGLGFC*RLCSPFRGWICDTA Trigger: CGCGGTGTCGCAGATCCACCCGCGGAATGGCGAACATAGCCTGCAGCAGAAGCCTAAGCCACAGAAGGTGAGCGGCTCGAGCTCCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 90 bp | GTGAGGCTGGAGGCACTGGAACTGGGAGCCTGGTGGCCGAGCACTTaGGGGTCGCTGGAAGATGGTGGTGGAGCAGTGCCAGGTGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VRLEALELGAWWPST*GSLEDGGGAVPGVE Trigger: CTCAACACCTGGCACTGCTCCACCACCATCTTCCAGCGACCCCCAAGTGCTCGGCCACCAGGCTCCCAGTTCCAGTGCCTCCAGCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 90 bp | GACCAACACTGGCCTGGCCAAAGATGGTGGCTGAAGGCAGAGGCCTaGCAAGGGGCATCTGGAACTGCGCGGAAGCTGCCAGGCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: DQHWPGQRWWLKAEA*QGASGTARKLPGPS Trigger: AGATGGGCCTGGCAGCTTCCGCGCAGTTCCAGATGCCCCTTGCCAGGCCTCTGCCTTCAGCCACCATCTTTGGCCAGGCCAGTGTTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 90 bp | AGGAGTAAGGGCAGGACCAACACTGGCCTGGCCAAAGATGGTGGCTaGAGGCAGAGGCCTGGCAAGGGGCATCTGGAACTGCGCGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RSKGRTNTGLAKDGG*RQRPGKGHLELRGS Trigger: GCTTCCGCGCAGTTCCAGATGCCCCTTGCCAGGCCTCTGCCTTCAGCCACCATCTTTGGCCAGGCCAGTGTTGGTCCTGCCCTTACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 90 bp | GTAGAAGGCAGTGGGAGTCGTGGTAGCAGTGTTAGGGTTCTGGAATaGCACAGGAGAGAAGTCACCTGGCTCCTGGGGGAAGGCGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: VEGSGSRGSSVRVLE*HRREVTWLLGEGEG Trigger: GCCCTCGCCTTCCCCCAGGAGCCAGGTGACTTCTCTCCTGTGGCATTCCAGAACCCTAACACTGCTACCACGACTCCCACTGCCTTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 90 bp | CAGGAGAGAAGTCACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTTaGCTGAGTTGTTGCTCGGGTCTTTGTCAGCATCTTTGTCGGGGT | + |
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Preference number: 5 (lower is better) Translates to: QERSHLAPGGRRGHR*LSCCSGLCQHLCRG Trigger: ACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGTGACTTCTCTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 90 bp | AGACTCAGACTCCGACTCGACATCTGGCAGTTGGAAGGTGAAGTGTaGTGCGGCACCCTCTGCAGCGGTGGCAGCAGTGATAGTAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: RLRLRLDIWQLEGEV*CGTLCSGGSSDSSR Trigger: TCGACTACTATCACTGCTGCCACCGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCGGAGTCTGAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 90 bp | AGAGAAGTCACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTTGGCTaGGTTGTTGCTCGGGTCTTTGTCAGCATCTTTGTCGGGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: REVTWLLGEGEGIVG*VVARVFVSIFVGVF Trigger: AAAGACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGTGACTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | AGCCCTAGGAGCGAGGGCCGCCGCCCCAGGAGCAAATaGAGCCCTAGGAGCAAGGGCCGCCCTAGGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SPRSEGRRPRSK*SPRSKGRPRSH Trigger: GTGGCTCCTAGGGCGGCCCTTGCTCCTAGGGCTGCATTTGCTCCTGGGGCGGCGGCCCTCGCTCCTAGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | CGCCCCAGCAGCCATGGCAGCTCCAAGAGCGAGGGCTaGCCCAGGAGTGAGGGCAGCTCCAGTAGCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: RPSSHGSSKSEG*PRSEGSSSSHG Trigger: GCCATGGCTACTGGAGCTGCCCTCACTCCTGGGGCAGCCCTCGCTCTTGGAGCTGCCATGGCTGCTGGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | AGCCCTAGGAGCAAGGGCCGCCCTAGGAGCCACTGCTaGCCCAGGAGCGAGGGCAGCTCCAGTAGCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: SPRSKGRPRSHC*PRSEGSSSSHG Trigger: GCCATGGCTACTGGAGCTGCCCTCGCTCCTGGGGCAGCAGTGGCTCCTAGGGCGGCCCTTGCTCCTAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 72 bp | ATTCCGCGGGTGGATCTGCGACACCGCGTTAGCCTCTaGGGGCTCATGGGGAGCTTCCCAGGACACCGCACC | + |
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Preference number: 6 (lower is better) Translates to: IPRVDLRHRVSL*GLMGSFPGHRT Trigger: GGTGCGGTGTCCTGGGAAGCTCCCCATGAGCCCTCAGAGGCTAACGCGGTGTCGCAGATCCACCCGCGGAAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | AACTGGGAGCCTGGTGGCCGAGCACTTGGGGGTCGCTaGAAGATGGTGGTGGAGCAGTGCCAGGTGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: NWEPGGRALGGR*KMVVEQCQVLS Trigger: GCTCAACACCTGGCACTGCTCCACCACCATCTTCCAGCGACCCCCAAGTGCTCGGCCACCAGGCTCCCAGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | CGCCTGCTGGTTGAGCTGCAGAGGTGCCTGGAGGGCTaGACTGTTGACCGACAGGAAGCCCGAAGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RLLVELQRCLEG*TVDRQEARRAV Trigger: GACAGCCCTTCGGGCTTCCTGTCGGTCAACAGTCAAGCCCTCCAGGCACCTCTGCAGCTCAACCAGCAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 72 bp | GCCTGCTGGTTGAGCTGCAGAGGTGCCTGGAGGGCTTaGCTGTTGACCGACAGGAAGCCCGAAGGGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ACWLSCRGAWRA*LLTDRKPEGLS Trigger: TGACAGCCCTTCGGGCTTCCTGTCGGTCAACAGTCAAGCCCTCCAGGCACCTCTGCAGCTCAACCAGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | AGGCCTGGCAAGGGGCATCTGGAACTGCGCGGAAGCTaGCAGGCCCATCTGCTGCTGGTTGTTGTAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RPGKGHLELRGS*QAHLLLVVVEG Trigger: GCCTTCTACAACAACCAGCAGCAGATGGGCCTGGCAGCTTCCGCGCAGTTCCAGATGCCCCTTGCCAGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 72 bp | ACTCAGACTCCGACTCGACATCTGGCAGTTGGAAGGTaGAGTGTGGTGCGGCACCCTCTGCAGCGGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TQTPTRHLAVGR*SVVRHPLQRWQ Trigger: CTGCCACCGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCGGAGTCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | CTCGAGCCGCTCACCTTCTGTGGCTTAGGCTTCTGCTaGAGGCTATGTTCGCCATTCCGCGGGTGGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: LEPLTFCGLGFC*RLCSPFRGWIC Trigger: GCAGATCCACCCGCGGAATGGCGAACATAGCCTGCAGCAGAAGCCTAAGCCACAGAAGGTGAGCGGCTCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | CTCCGACTCGACATCTGGCAGTTGGAAGGTGAAGTGTaGTGCGGCACCCTCTGCAGCGGTGGCAGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LRLDIWQLEGEV*CGTLCSGGSSD Trigger: ATCACTGCTGCCACCGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 72 bp | GGGGTCTTTGTCAGCGTCGTGGGCTGTGGTAGAGGATaGTGTTCTGCAGCACATCATCCGGAGGTTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: GVFVSVVGCGRG*CSAAHHPEVGG Trigger: GCCGCCAACCTCCGGATGATGTGCTGCAGAACATCATCCTCTACCACAGCCCACGACGCTGACAAAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | GGGCTCATGGGGAGCTTCCCAGGACACCGCACCAGTTaGCCCCGACTGACCATTATTGTAGCTGTTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GLMGSFPGHRTS*PRLTIIVAVQV Trigger: GACCTGAACAGCTACAATAATGGTCAGTCGGGGGCAACTGGTGCGGTGTCCTGGGAAGCTCCCCATGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | CGACTCGACATCTGGCAGTTGGAAGGTGAAGTGTGGTaGGGCACCCTCTGCAGCGGTGGCAGCAGTGATAGT | + |
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Preference number: 6 (lower is better) Translates to: RLDIWQLEGEVW*GTLCSGGSSDS Trigger: ACTATCACTGCTGCCACCGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | AGGGCCGACATAGCTCAGTCTTATAGCGCTCAGAAGTaGCCAGGGAGCTCGAGCCGCTCACCTTCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RADIAQSYSAQK*PGSSSRSPSVA Trigger: AGCCACAGAAGGTGAGCGGCTCGAGCTCCCTGGCCACTTCTGAGCGCTATAAGACTGAGCTATGTCGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | GACTCAGACTCAGACTCCGACTCGACATCTGGCAGTTaGAAGGTGAAGTGTGGTGCGGCACCCTCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: DSDSDSDSTSGS*KVKCGAAPSAA Trigger: CGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCGGAGTCTGAGTCTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | CGACTCAGACTCAGACTCCGACTCGACATCTGGCAGTaGGAAGGTGAAGTGTGGTGCGGCACCCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLRLRLRLDIWQ*EGEVWCGTLCS Trigger: GCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCAGATGTCGAGTCGGAGTCTGAGTCTGAGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | GGCTGCTGCTCCCCGTTAACGCCCAAATGCAGCACATTGGAGCCATaGAAGGAGCTGGGCTCCTCCAAGGTGCTCTCGGAAAGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: GCCSPLTPKCSTLEP*KELGSSKVLSESTG Trigger: ACCTGTGCTTTCCGAGAGCACCTTGGAGGAGCCCAGCTCCTTCAATGGCTCCAATGTGCTGCATTTGGGCGTTAACGGGGAGCAGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | TCACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTTGGCTGAGTTGTaGCTCGGGTCTTTGTCAGCATCTTTGTCGGGGTCTTTGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SPGSWGKARASLAEL*LGSLSASLSGSLSA Trigger: CGCTGACAAAGACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | ACAGGAGAGAAGTCACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTaGGCTGAGTTGTTGCTCGGGTCTTTGTCAGCATCTTTGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGEKSPGSWGKARAS*AELLLGSLSASLSG Trigger: CCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGTGACTTCTCTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | TCTGAGAAGCGGCTGAAGATGGGCAGACGGCGGCTGGAGTTGGTGTaGTCGAATTCGGATTCATTGAGGCTGCTGGAGCTCGAGGAACGC | + |
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Preference number: 6 (lower is better) Translates to: SEKRLKMGRRRLELV*SNSDSLRLLELEER Trigger: GCGTTCCTCGAGCTCCAGCAGCCTCAATGAATCCGAATTCGACAACACCAACTCCAGCCGCCGTCTGCCCATCTTCAGCCGCTTCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS TCA 72 bp | ACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTTGGCTaGGTTGTTGCTCGGGTCTTTGTCAGCATCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: TWLLGEGEGIVG*VVARVFVSIFV Trigger: GACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | CCTGGGGGAAGGCGAGGGCATCGTTGGCTGAGTTGTTaGTCGGGTCTTTGTCAGCATCTTTGTCGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PGGRRGHRWLSC*SGLCQHLCRGL Trigger: AAGACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | TGGCAGTTGGAAGGTGAAGTGTGGTGCGGCACCCTCTaGAGCGGTGGCAGCAGTGATAGTAGTCGAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: WQLEGEVWCGTL*SGGSSDSSRGC Trigger: ACATCCTCGACTACTATCACTGCTGCCACCGCTGCAGAGGGTGCCGCACCACACTTCACCTTCCAACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | CGAGGATGTATTGCCCACAGTGGCAGTTGCAGCACCTaGAGCCAATATGCCGGTAGAGGCTGTGGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: RGCIAHSGSCST*SQYAGRGCGNS Trigger: GGAGTTGCCACAGCCTCTACCGGCATATTGGCTCCAGGTGCTGCAACTGCCACTGTGGGCAATACATCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | GTAGAGGATGATGTTCTGCAGCACATCATCCGGAGGTaGGCGGCTGCAGGGTGTGATGAGGGCATAACCCCG | + |
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Preference number: 6 (lower is better) Translates to: VEDDVLQHIIRR*AAAGCDEGITP Trigger: CGGGGTTATGCCCTCATCACACCCTGCAGCCGCCAACCTCCGGATGATGTGCTGCAGAACATCATCCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | TCCTGGGGGAAGGCGAGGGCATCGTTGGCTGAGTTGTaGCTCGGGTCTTTGTCAGCATCTTTGTCGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SWGKARASLAEL*LGSLSASLSGS Trigger: AGACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | CGGCTGAAGATGGGCAGACGGCGGCTGGAGTTGGTGTaGTCGAATTCGGATTCATTGAGGCTGCTGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RLKMGRRRLELV*SNSDSLRLLEL Trigger: GAGCTCCAGCAGCCTCAATGAATCCGAATTCGACAACACCAACTCCAGCCGCCGTCTGCCCATCTTCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | AAGTCACCTGGCTCCTGGGGGAAGGCGAGGGCATCGTTGGCTGAGTaGTTGCTCGGGTCTTTGTCAGCATCTTTGTCGGGGTCTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: KSPGSWGKARASLAE*LLGSLSASLSGSLS Trigger: TGACAAAGACCCCGACAAAGATGCTGACAAAGACCCGAGCAACAACTCAGCCAACGATGCCCTCGCCTTCCCCCAGGAGCCAGGTGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 90 bp | TCAGAGTCTGAGAAGCGGCTGAAGATGGGCAGACGGCGGCTGGAGTaGGTGTTGTCGAATTCGGATTCATTGAGGCTGCTGGAGCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SESEKRLKMGRRRLE*VLSNSDSLRLLELE Trigger: CTCGAGCTCCAGCAGCCTCAATGAATCCGAATTCGACAACACCAACTCCAGCCGCCGTCTGCCCATCTTCAGCCGCTTCTCAGACTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS GCA 72 bp | AGTGGGAGTCGTGGTAGCAGTGTTAGGGTTCTGGAATaGCACAGGAGAGAAGTCACCTGGCTCCTGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SGSRGSSVRVLE*HRREVTWLLGE Trigger: TTCCCCCAGGAGCCAGGTGACTTCTCTCCTGTGGCATTCCAGAACCCTAACACTGCTACCACGACTCCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CCA 72 bp | AAGGCAGTGGGAGTCGTGGTAGCAGTGTTAGGGTTCTaGAATGCCACAGGAGAGAAGTCACCTGGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KAVGVVVAVLGF*NATGEKSPGSW Trigger: CCAGGAGCCAGGTGACTTCTCTCCTGTGGCATTCCAGAACCCTAACACTGCTACCACGACTCCCACTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | TCCCCGTTAACGCCCAAATGCAGCACATTGGAGCCATaGAAGGAGCTGGGCTCCTCCAAGGTGCTCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPLTPKCSTLEP*KELGSSKVLSE Trigger: TTCCGAGAGCACCTTGGAGGAGCCCAGCTCCTTCAATGGCTCCAATGTGCTGCATTTGGGCGTTAACGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | CGGCGGCTGGAGTTGGTGTTGTCGAATTCGGATTCATaGAGGCTGCTGGAGCTCGAGGAACGCCTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RRLELVLSNSDS*RLLELEERLRK Trigger: CTTTCTGAGGCGTTCCTCGAGCTCCAGCAGCCTCAATGAATCCGAATTCGACAACACCAACTCCAGCCGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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| CDS CAA 72 bp | GAGAAGCGGCTGAAGATGGGCAGACGGCGGCTGGAGTaGGTGTTGTCGAATTCGGATTCATTGAGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: EKRLKMGRRRLE*VLSNSDSLRLL Trigger: CAGCAGCCTCAATGAATCCGAATTCGACAACACCAACTCCAGCCGCCGTCTGCCCATCTTCAGCCGCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071711.4 |
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