Pregenerated sensors for ZFP36L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045817Ensembl transcript IDs: ENSMUST00000060366.7
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGAAATGGTTCTAAGCTAAACACCCACACTACGTGGTGGCAATaGGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: RGNGSKLNTHTTWWQ*ARYQTLECKGFPTP Trigger: GGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCATTGCCACCACGTAGTGTGGGTGTTTAGCTTAGAACCATTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR GCA 90 bp | TGCACACGCGGTGCTCCAACTGTACCTACATACAAACTAAACAACTaGTCATTTATCTGCCATCCAGGAAAGCCGGAGACATTCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: CTRGAPTVPTYKLNN*SFICHPGKPETFLP Trigger: AGGCAGGAATGTCTCCGGCTTTCCTGGATGGCAGATAAATGAGCAGTTGTTTAGTTTGTATGTAGGTACAGTTGGAGCACCGCGTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR GCA 90 bp | GCTCCAACTGTACCTACATACAAACTAAACAACTGCTCATTTATCTaGCATCCAGGAAAGCCGGAGACATTCCTGCCTCTTTACATTGAA | + |
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Preference number: 1 (lower is better) Translates to: APTVPTYKLNNCSFI*HPGKPETFLPLYIE Trigger: TTCAATGTAAAGAGGCAGGAATGTCTCCGGCTTTCCTGGATGGCAGATAAATGAGCAGTTGTTTAGTTTGTATGTAGGTACAGTTGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR GCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAACGGTGGCCCCCGCTGTaGCTTTCCCAACCCCTCGCG | + |
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Preference number: 2 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKRWPPL*LSQPLA Trigger: CGCGAGGGGTTGGGAAAGGCACAGCGGGGGCCACCG...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CCA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACGAAGAGATGGAATGGTaGTTGGTAGCTGCTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYEEMEW*LVAAGA Trigger: AGCACCAGCAGCTACCAACCACCATTCCATCTCTTC...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGTATAGTTTAGGGAGGTaGCAGCCGGCTGGCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSYSLGR*QPAGSH Trigger: GTGTGAGCCAGCCGGCTGCCACCTCCCTAAACTATA...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACACAACCGCCCTGTTGTaGATATTTTGTTCATCCATA | + |
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Preference number: 2 (lower is better) Translates to: NVTVELVVYKAGCREASHTTALL*IFCSSI Trigger: TATGGATGAACAAAATATTCACAACAGGGCGGTTGT...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR CAA 90 bp | TTATCTGCCATCCAGGAAAGCCGGAGACATTCCTGCCTCTTTACATaGAAAAATAATAGTACAAGTTTTTGGACTGTCATTGAACAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSAIQESRRHSCLFT*KNNSTSFWTVIEQG Trigger: GCCTTGTTCAATGACAGTCCAAAAACTTGTACTATTATTTTTCAATGTAAAGAGGCAGGAATGTCTCCGGCTTTCCTGGATGGCAGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACCTCTTTAAAGTTGGATaGGCTACAACCATTATACAT | + |
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Preference number: 2 (lower is better) Translates to: NVTVELVVYKAGCREASHLFKVG*ATTIIH Trigger: ATGTATAATGGTTGTAGCCCATCCAACTTTAAAGAG...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAAAGAGTTCTCACATCTaGACTGTTTCTAAGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKKSSHI*TVSKAF Trigger: GAAAGCCTTAGAAACAGTCCAGATGTGAGAACTCTT...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR TCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAAGGCATATATTACTGTaGAAAGAACACACTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKRHILL*KEHTPH Trigger: ATGTGGAGTGTGTTCTTTTCACAGTAATATATGCCT...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR CCA 72 bp | TATAGTTTAGGGAGGTGGCAGCCGGCTGGCTCACACTaGTCTTGGAACCCCTTCCAAGAGTTCTCACATCTG | + |
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Preference number: 3 (lower is better) Translates to: YSLGRWQPAGSH*SWNPFQEFSHL Trigger: CAGATGTGAGAACTCTTGGAAGGGGTTCCAAGACCAGTGTGAGCCAGCCGGCTGCCACCTCCCTAAACTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR CCA 72 bp | ACACTACGTGGTGGCAATGAGCCCGTTATCAAACTTTaGAATGCAAGGGCTTCCCCACCCCCAGACATACAG | + |
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Preference number: 3 (lower is better) Translates to: TLRGGNEPVIKL*NARASPPPDIQ Trigger: CTGTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCATTGCCACCACGTAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR TCA 72 bp | GGTTCTAAGCTAAACACCCACACTACGTGGTGGCAATaGGCCCGTTATCAAACTTTGGAATGCAAGGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GSKLNTHTTWWQ*ARYQTLECKGF Trigger: GAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCATTGCCACCACGTAGTGTGGGTGTTTAGCTTAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CAA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACGTTTTTCATATTGAGTaGTGGTGCAGTGGTGCGGAT | + |
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Preference number: 3 (lower is better) Translates to: NVTVELVVYKAGCREASHVFHIE*WCSGAD Trigger: ATCCGCACCACTGCACCACAACTCAATATGAAAAAC...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CAA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAGTGTTTGGTATCTTTaGTTCTTTCCGCATCACAAC | + |
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Preference number: 3 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSSVWYL*FFPHHN Trigger: GTTGTGATGCGGAAAGAACAAAAGATACCAAACACT...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR-3UTR CAA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACCTGAGACCTAAGTGTTaGGTATCTTTTGTTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: NVTVELVVYKAGCREASHLRPKC*VSFVLS Trigger: GGAAAGAACAAAAGATACCAAACACTTAGGTCTCAG...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR GCA 72 bp | CATTTATCTGCCATCCAGGAAAGCCGGAGACATTCCTaGCTCTTTACATTGAAAAATAATAGTACAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HLSAIQESRRHS*LFTLKNNSTSF Trigger: AAAACTTGTACTATTATTTTTCAATGTAAAGAGGCAGGAATGTCTCCGGCTTTCCTGGATGGCAGATAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | TGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCCGGGACTCGGAGCCGCTaGGGCTGCCGGAGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: CRSVALPNRWPPLCLSQPGTRSR*GCRSSA Trigger: CGCTGAGCTCCGGCAGCCTCAGCGGCTCCGAGTCCC...GGGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | TGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCCCAGACCGCCTCCGCCTaGGGGGCCACAGCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CRSVALPNRWPPLCLSQPQTASA*GATAAA Trigger: GGCAGCAGCTGTGGCCCCGCAGGCGGAGGCGGTCTG...GGGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | CTGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCAGGGCGGCGGCGGCGTaGGCGATGTGGGGCTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: LPQCRPPQPVAPAVPFPTRAAAA*AMWGCR Trigger: TCGACAGCCCCACATCGCGCACGCCGCCGCCGCCCT...GGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCAGACGGCGCGGCAGCTaGAAGCCGAAGGGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LPQCRPPQPVAPAVPFPTRRRGS*KPKGGE Trigger: CTCCCCGCCCTTCGGCTTCCAGCTGCCGCGCCGTCT...GGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCAGCAGCTGCCCGGACTaGGCACAGGGTGGGCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: LPQCRPPQPVAPAVPFPTSSCPD*AQGGQA Trigger: CGCTTGCCCACCCTGTGCCCAGTCCGGGCAGCTGCT...GGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | TGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCCCGATGGTGTGGAAGGTaGGGCACAGCTCTGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: CRSVALPNRWPPLCLSQPRWCGR*GTALSC Trigger: ACAAGACAGAGCTGTGCCGCACCTTCCACACCATCG...GGGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | CTGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCGATATCGTAGAAGGGTaGCAGAAGTGTGGTCGACAT | + |
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Preference number: 4 (lower is better) Translates to: LPQCRPPQPVAPAVPFPTDIVEG*QKCGRH Trigger: ATGTCGACCACACTTCTGTCACCCTTCTACGATATC...GGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACACTTGGGGTGCCGGGTaGGGCTGCGCAGCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYTWGAG*GCAARG Trigger: TCCACGAGCTGCGCAGCCTCACCCGGCACCCCAAGT...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACGAGAAACTGAGGCTGTaGTGCAGCTTGGGCCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYEKLRL*CSLGRG Trigger: GCCGCGGCCCAAGCTGCATCACAGCCTCAGTTTCTC...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACGCTCCCCGTTCTCGCTaGACGAGCGGTCCCGAAATT | + |
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Preference number: 4 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYAPRSR*TSGPEI Trigger: AATTTCGGGACCGCTCGTTCAGCGAGAACGGGGAGC...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACGCGGCGTGCGCGATGTaGGGCTGTCGAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: NVTVELVVYKAGCREASHAACAM*GCRAAA Trigger: CGCTGCTGCTCGACAGCCCCACATCGCGCACGCCGC...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACCCCCCGAAGGCTCCTTaGGCTGGCCGTAGGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NVTVELVVYKAGCREASHPPKAP*AGRRRP Trigger: TGGCCTCCTACGGCCAGCTCAAGGAGCCTTCGGGGG...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACGCGCGTGGAGGTTGCTaGCGGAGTGGCGTCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NVTVELVVYKAGCREASHARGGC*RSGVAG Trigger: TCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGC...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACGCGGCGGCGAAGTTGTaGGTCTGGATGGCGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: NVTVELVVYKAGCREASHAAAKL*VWMASG Trigger: GCCGCTCGCCATCCAGACCCACAACTTCGCCGCCGC...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGTGTAGCGCGTGGAGTTaGTCTGGGAGCCGCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSCSAWS*SGSRCP Trigger: GGGGCAGCGGCTCCCAGATCAACTCCACGCGCTACA...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATGGGTGGGCAAGCGCGTaGAGGTTGCTGGCGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNGWASA*RLLAEW Trigger: CCACTCCGCCAGCAACCTCCACGCGCTTGCCCACCC...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATCGCCGTACTTGCACGTaGCGCTCTCCTCGAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNRRTCT*RSPRRA Trigger: GGCCCTTCGAGGAGAGCGGCACGTGCAAGTACGGCG...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATAGGTTGCTGGCGGAGTaGCGTCGCAGGAAGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNRLLAE*RRRKPG Trigger: TCCGGGCTTCCTGCGACGCCACTCCGCCAGCAACCT...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATAGGCTGCGCAGCTCGTaGAAGCCGTGCGCGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNRLRSS*KPCANW Trigger: CCAGTTCGCGCACGGCTTCCACGAGCTGCGCAGCCT...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATAGATGGAGAGGCGGCTaGAGATGGGTAGGCGACGGC | + |
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Preference number: 4 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNRWRGG*RWVGDG Trigger: GCCGTCGCCTACCCATCTTCAGCCGCCTCTCCATCT...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAGGCTGTGATGCAGCTTaGGCCGCGGCTCGCGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKGCDAA*AAARGR Trigger: TCGCCCGCGAGCCGCGGCCCAAGCTGCATCACAGCC...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGGCGAAGTTGTGGGTCTaGATGGCGAGCGGCGTGATG | + |
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Preference number: 4 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSAKLWV*MASGVM Trigger: CATCACGCCGCTCGCCATCCAGACCCACAACTTCGC...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CCA 90 bp | AATGTCACAGTAGAGCTGGTGGTTTATAAAGCTGGATGTAGAGAAGCAAGCCACAAGCCGTGCGCGAACTaGCACTTCTCGCCGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: NVTVELVVYKAGCREASHKPCAN*HFSPYL Trigger: CAAGTACGGCGAGAAGTGCCAGTTCGCGCACGGCTT...GTGGCTTGCTTCTCTACATCCAGCTTTATAAACCACCAGCTCTACTGTGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACGCATGTTGTTCAGATTaGGGTTTGCCAGGGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYACCSD*GLPGIS Trigger: AGAAATCCCTGGCAAACCTCAATCTGAACAACATGC...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAACCCTTCTGCTGCTGCTaGAGGTGCAGGAGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKPFCCC*RCRRCW Trigger: CCAGCACCTCCTGCACCTGCAGCAGCAGCAGAAGGG...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAACTTCTCGCCGTACTTaGACGTGCCGCTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKTSRRT*TCRSPR Trigger: TCGAGGAGAGCGGCACGTGCAAGTACGGCGAGAAGT...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR GCA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGGTTCAGATTGAGGTTTaGCAGGGATTTCTCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSVQIEV*QGFLRL Trigger: AAGACGGAGAAATCCCTGGCAAACCTCAATCTGAAC...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| 3UTR CAA 72 bp | AAACTAGAGTTTCAAACTCATCTGAGACCTAAGTGTTaGGTATCTTTTGTTCTTTCCGCATCACAACCGCCC | + |
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Preference number: 4 (lower is better) Translates to: KLEFQTHLRPKC*VSFVLSASQPP Trigger: GGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAGGTCTCAGATGAGTTTGAAACTCTAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS TCA 90 bp | GCGCGTGGAGGTTGCTGGCGGAGTGGCGTCGCAGGAAGCCCGGAGTaGAGCTCGAGCTGGGGGCAGCAGCCACGGGCGTCCCTACCGCCT | + |
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Preference number: 5 (lower is better) Translates to: ARGGCWRSGVAGSPE*SSSWGQQPRASLPP Trigger: AGGCGGTAGGGACGCCCGTGGCTGCTGCCCCCAGCTCGAGCTTCACTCCGGGCTTCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS TCA 90 bp | TGGGTAGGCGACGGCCAGGGTCCAGGCTGGGGGACTCGGAGCCGCTaGGGCTGCCGGAGCTCAGCGAGCCGCTCAGGTAGCTGTCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: WVGDGQGPGWGTRSR*GCRSSASRSGSCRG Trigger: ACCGCGACAGCTACCTGAGCGGCTCGCTGAGCTCCGGCAGCCTCAGCGGCTCCGAGTCCCCCAGCCTGGACCCTGGCCGTCGCCTACCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CCA 90 bp | GCGCCCGGGAACTTCGGCGAGCAGCTGCCCGGACTGGGCACAGGGTaGGCAAGCGCGTGGAGGTTGCTGGCGGAGTGGCGTCGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: APGNFGEQLPGLGTG*ASAWRLLAEWRRRK Trigger: CTTCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGCTTGCCCACCCTGTGCCCAGTCCGGGCAGCTGCTCGCCGAAGTTCCCGGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CCA 90 bp | GGACTGGGCACAGGGTGGGCAAGCGCGTGGAGGTTGCTGGCGGAGTaGCGTCGCAGGAAGCCCGGAGTGAAGCTCGAGCTGGGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLGTGWASAWRLLAE*RRRKPGVKLELGAA Trigger: TGCTGCCCCCAGCTCGAGCTTCACTCCGGGCTTCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGCTTGCCCACCCTGTGCCCAGTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CCA 90 bp | GGGTGCCGGGTGAGGCTGCGCAGCTCGTGGAAGCCGTGCGCGAACTaGCACTTCTCGCCGTACTTGCACGTGCCGCTCTCCTCGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GCRVRLRSSWKPCAN*HFSPYLHVPLSSKG Trigger: GCCCTTCGAGGAGAGCGGCACGTGCAAGTACGGCGAGAAGTGCCAGTTCGCGCACGGCTTCCACGAGCTGCGCAGCCTCACCCGGCACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | CTGCCGCAGTGTCGCCCTCCCCAACCGGTGGCCCCCGCTGTGCCTTTCCCAACCGAGCGGTCCCGAAATTaGCTCTCCTTGGTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: LPQCRPPQPVAPAVPFPTERSRN*LSLVTS Trigger: GCTGGTCACCAAGGAGAGCAAATTTCGGGACCGCTC...GGTTGGGAAAGGCACAGCGGGGGCCACCGGTTGGGGAGGGCGACACTGCGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | CTAAGTGTTTGGTATCTTTTGTTCTTTCCGCATCACAACCGCCCTGTTGTGAATCACTTCTCGCCGTACTaGCACGTGCCGCTCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LSVWYLLFFPHHNRPVVNHFSPY*HVPLSS Trigger: CGAGGAGAGCGGCACGTGCAAGTACGGCGAGAAGTG...ATTCACAACAGGGCGGTTGTGATGCGGAAAGAACAAAAGATACCAAACACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAGCCGCGGCGGCGAAGTaGTGGGTCTGGATGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKAAAAK*WVWMAS Trigger: GCTCGCCATCCAGACCCACAACTTCGCCGCCGCGGC...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | ATGAGCCCGTTATCAAACTTTGGAATGCAAGGGCTTCCCCACCCCCAGACATACTTCTTGTCCAGCATGTaGTTCAGATTGAGGTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: MSPLSNFGMQGLPHPQTYFLSSM*FRLRFA Trigger: GGCAAACCTCAATCTGAACAACATGCTGGACAAGAA...GTATGTCTGGGGGTGGGGAAGCCCTTGCATTCCAAAGTTTGATAACGGGCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | CTCAAACCACTTCCACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAGCATGTTGTTCAGATaGAGGTTTGCCAGGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: LKPLPQHQDCMVSSCDLSSMLFR*RFARDF Trigger: GAAATCCCTGGCAAACCTCAATCTGAACAACATGCT...CGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTGGAAGTGGTTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS-3UTR CAA 90 bp | CACAGCATCAAGATTGCATGGTTTCTTCATGCGATCTTTCGAAATTTACGTAAAGTCCCTACCGCCTTCTaGTCCAGCATGTTGTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: HSIKIAWFLHAIFRNLRKVPTAF*SSMLFR Trigger: TCTGAACAACATGCTGGACAAGAAGGCGGTAGGGAC...TTTACGTAAATTTCGAAAGATCGCATGAAGAAACCATGCAATCTTGATGCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CCA 72 bp | GGGCGCCCGGGAACTTCGGCGAGCAGCTGCCCGGACTaGGCACAGGGTGGGCAAGCGCGTGGAGGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRPGTSASSCPD*AQGGQARGGCW Trigger: CCAGCAACCTCCACGCGCTTGCCCACCCTGTGCCCAGTCCGGGCAGCTGCTCGCCGAAGTTCCCGGGCGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS TCA 72 bp | GCGGCTGGTGGTGGCCCGACGGGAAGCCGGAGAAACTaGGGCTGTGATGCAGCTTGGGCCGCGGCTCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: AAGGGPTGSRRN*GCDAAWAAARG Trigger: CCCGCGAGCCGCGGCCCAAGCTGCATCACAGCCTCAGTTTCTCCGGCTTCCCGTCGGGCCACCACCAGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 90 bp | AGCGGCGTGATGAGGCTGCTCAGCTCCGGGCCGAAAGCGAAGGCGTaGTTAGCGCCGGAGGACGAGCAGGAGGCGCACGGCGCTCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SGVMRLLSSGPKAKA*LAPEDEQEAHGAPG Trigger: CCCCGGAGCGCCGTGCGCCTCCTGCTCGTCCTCCGGCGCTAACAACGCCTTCGCTTTCGGCCCGGAGCTGAGCAGCCTCATCACGCCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 90 bp | GAGCAGCTGCCCGGACTGGGCACAGGGTGGGCAAGCGCGTGGAGGTaGCTGGCGGAGTGGCGTCGCAGGAAGCCCGGAGTGAAGCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: EQLPGLGTGWASAWR*LAEWRRRKPGVKLE Trigger: CTCGAGCTTCACTCCGGGCTTCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGCTTGCCCACCCTGTGCCCAGTCCGGGCAGCTGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CCA 72 bp | ACAGGGTGGGCAAGCGCGTGGAGGTTGCTGGCGGAGTaGCGTCGCAGGAAGCCCGGAGTGAAGCTCGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TGWASAWRLLAE*RRRKPGVKLEL Trigger: CAGCTCGAGCTTCACTCCGGGCTTCCTGCGACGCCACTCCGCCAGCAACCTCCACGCGCTTGCCCACCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 72 bp | CGCTCCCCGTTCTCGCTGAACGAGCGGTCCCGAAATTaGCTCTCCTTGGTGACCAGCGCCGTGCCGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSPFSLNERSRN*LSLVTSAVPLP Trigger: GGGCAGCGGCACGGCGCTGGTCACCAAGGAGAGCAAATTTCGGGACCGCTCGTTCAGCGAGAACGGGGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 90 bp | GGGGCAGCAGCCACGGGCGTCCCTACCGCCTTCTTGTCCAGCATGTaGTTCAGATTGAGGTTTGCCAGGGATTTCTCCGTCTTGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: GAAATGVPTAFLSSM*FRLRFARDFSVLHK Trigger: CTTGTGCAAGACGGAGAAATCCCTGGCAAACCTCAATCTGAACAACATGCTGGACAAGAAGGCGGTAGGGACGCCCGTGGCTGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 72 bp | GCCACGGGCGTCCCTACCGCCTTCTTGTCCAGCATGTaGTTCAGATTGAGGTTTGCCAGGGATTTCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: ATGVPTAFLSSM*FRLRFARDFSV Trigger: GACGGAGAAATCCCTGGCAAACCTCAATCTGAACAACATGCTGGACAAGAAGGCGGTAGGGACGCCCGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 90 bp | GCCACGGGCGTCCCTACCGCCTTCTTGTCCAGCATGTTGTTCAGATaGAGGTTTGCCAGGGATTTCTCCGTCTTGCACAAGAAGTCGATA | + |
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Preference number: 6 (lower is better) Translates to: ATGVPTAFLSSMLFR*RFARDFSVLHKKSI Trigger: TATCGACTTCTTGTGCAAGACGGAGAAATCCCTGGCAAACCTCAATCTGAACAACATGCTGGACAAGAAGGCGGTAGGGACGCCCGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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| CDS CAA 72 bp | GTCCCTACCGCCTTCTTGTCCAGCATGTTGTTCAGATaGAGGTTTGCCAGGGATTTCTCCGTCTTGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: VPTAFLSSMLFR*RFARDFSVLHK Trigger: CTTGTGCAAGACGGAGAAATCCCTGGCAAACCTCAATCTGAACAACATGCTGGACAAGAAGGCGGTAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060366.7 |
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