Pregenerated sensors for ZFP36L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021127Ensembl transcript IDs: ENSMUST00000021552.3, ENSMUST00000165114.2, ENSMUST00000218835.2, ENSMUST00000219642.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTaGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGTTCG | + |
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Preference number: 1 (lower is better) Translates to: PLMSKPSSNLFNLCP*RPTQTQARLVNRGS Trigger: CGAACCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CAA 90 bp | ATAAGGAAGAGGAAGAGTGTGCGGGAGACCGAAAGAAAGGTGCACTaGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGTCACCCCACC | + |
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Preference number: 2 (lower is better) Translates to: IRKRKSVRETERKVH*CGQLGELLVAGHPT Trigger: GGTGGGGTGACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTCTTCCTCTTCCTTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGTCACCCCTACAAGGCACTAAGTTaGTTCTGTAAACGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: RKVHLCGQLGELLVAGHPYKALS*FCKRLL Trigger: CAGTAACCGTTTACAGAAGCAACTTAGTGCCTTGTA...GGGGTGACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTACTTGTGTGGCCAGCTaGGGGAGCTGCTGGTTGCGG | + |
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Preference number: 2 (lower is better) Translates to: QLVQPLSLETYTNPGKISTCVAS*GSCWLR Trigger: CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGT...ACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAAACTTGTGTGGCCAGCTaGGGGAGCTGCTGGTTGCGG | + |
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Preference number: 2 (lower is better) Translates to: LVQPLSLETYTNPGKISQTCVAS*GSCWLR Trigger: CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGT...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CAA 90 bp | AATGGAGGGAGAGGGTTTCAAGCCAGAAGCTACCAACAAATTGACTaGTCCTTATGTGGGGAAGAGATGGGGTGGAGAGGTGAAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: NGGRGFQARSYQQID*SLCGEEMGWRGEGG Trigger: GCCTCCTTCACCTCTCCACCCCATCTCTTCCCCACATAAGGACAAGTCAATTTGTTGGTAGCTTCTGGCTTGAAACCCTCTCCCTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165114.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAAAGACCGAAAGAAAGGTaGACTTGTGTGGCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVQPLSLETYTNPGKISQRPKER*TCVASW Trigger: CCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CAA 90 bp | CGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTaGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAG | + |
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Preference number: 2 (lower is better) Translates to: RSPTYVKTFVQLVQP*SLETYTNPGKISQQ Trigger: CTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGTACAAGGCACTAAGTTaGTTCTGTAAACGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: QPLSLETYTNPGKISQQGYKALS*FCKRLL Trigger: CAGTAACCGTTTACAGAAGCAACTTAGTGCCTTGTA...CCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CAA 90 bp | AAATTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTaGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KLNHEVPLMSKPSSN*FNLCPWRPTQTQAR Trigger: TCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTATCTACTGACAAAAGATaGAACTCTGTTATGCGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SNLFNLCPWRPTQTQARLSTDKR*NSVMRG Trigger: ACCACGCATAACAGAGTTCCATCTTTTGTCAGTAGA...TAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGAAGCTACCAACAAATTaGCTTGTCCTTATGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KSRSPTYVKTFVQLVQPLKLPTN*LVLMWG Trigger: CCCCCACATAAGGACAAGTCAATTTGTTGGTAGCTT...CAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021552.3 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTAAGCTACCAACAAATTaGCTTGTCCTTATGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LNHEVPLMSKPSSNLFNLKLPTN*LVLMWG Trigger: TCCCCACATAAGGACAAGTCAATTTGTTGGTAGCTT...AAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165114.2 |
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| 3UTR CAA 90 bp | AAATCCATTAAAGCTACTTCTACAGGAAATCGTTTTACACAGATATaGTATGTGGAATGCAGACCATTAACTGCTCACCCCTTACATGTT | + |
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Preference number: 2 (lower is better) Translates to: KSIKATSTGNRFTQI*YVECRPLTAHPLHV Trigger: AACATGTAAGGGGTGAGCAGTTAATGGTCTGCATTCCACATACAATATCTGTGTAAAACGATTTCCTGTAGAAGTAGCTTTAATGGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021552.3 |
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| 3UTR CCA 72 bp | GAGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTaGCCAGCTGGGGGAGCTGCTGGTTGCGGGTCACCC | + |
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Preference number: 3 (lower is better) Translates to: ECAGDRKKGALV*PAGGAAGCGSP Trigger: GGGTGACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGGAAGCTACCAACAAATaGACTTGTCCTTATGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SVRETERKVHLCGQLGELEATNK*TCPYVG Trigger: CCCCACATAAGGACAAGTCAATTTGTTGGTAGCTTC...CAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR TCA 72 bp | AAGATGGAACTCTGTTATGCGTGGTTAAGTGGGCTATaGAATGGAGGGAGAGGGTTTCAAGCCAGAAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: KMELCYAWLSGL*NGGRGFQARSY Trigger: GTAGCTTCTGGCTTGAAACCCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAGAGTTCCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CCA 72 bp | CTGACAAAAGATGGAACTCTGTTATGCGTGGTTAAGTaGGCTATGAAATGGAGGGAGAGGGTTTCAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LTKDGTLLCVVK*AMKWRERVSSQ Trigger: CTGGCTTGAAACCCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAGAGTTCCATCTTTTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAATACCAACAAATTGACTaGTCCTTATGTGGGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LVQPLSLETYTNPGKISQYQQID*SLCGEE Trigger: CTCTTCCCCACATAAGGACAAGTCAATTTGTTGGTA...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165114.2 |
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| 3UTR-3UTR CAA 90 bp | GGTATTCTAGAGCAAAATCCATTAAAGCTACTTCTACAGGAAATCGTTTTACACGAAGCTACCAACAAATaGACTTGTCCTTATGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GILEQNPLKLLLQEIVLHEATNK*TCPYVG Trigger: CCCCACATAAGGACAAGTCAATTTGTTGGTAGCTTC...GTGTAAAACGATTTCCTGTAGAAGTAGCTTTAATGGATTTTGCTCTAGAATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021552.3 |
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| 3UTR GCA 72 bp | ACAGGAAATCGTTTTACACAGATATTGTATGTGGAATaGAGACCATTAACTGCTCACCCCTTACATGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: TGNRFTQILYVE*RPLTAHPLHVF Trigger: AAAAACATGTAAGGGGTGAGCAGTTAATGGTCTGCATTCCACATACAATATCTGTGTAAAACGATTTCCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021552.3 |
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| CDS-3UTR CCA 90 bp | AGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGCAGGCTGCTTCTGGGTaGGCAGCAGCCGCTCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPKERCTCVASWGSCWLRQAASG*AAAARP Trigger: GGGGCGAGCGGCTGCTGCCCACCCAGAAGCAGCCTG...CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | AGAGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCCAGGCTGCTTCTGGGTaGGCAGCAGCCGCTCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RVCGRPKERCTCVASWGSQAASG*AAAARP Trigger: GGGGCGAGCGGCTGCTGCCCACCCAGAAGCAGCCTG...GCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | TGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTCCCCGCCAGCAGGGGTaGCCACTGCCTTCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CAGDRKKGALVWPAGGAAPRQQG*PLPSCP Trigger: TGGACAGGAAGGCAGTGGGCACCCCTGCTGGCGGGG...AGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | AGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGTGGCCGCTCCCAGGCTaGTTCTGGGTGGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPKERCTCVASWGSCWLRWPLPG*FWVGSS Trigger: GCTGCTGCCCACCCAGAAGCAGCCTGGGAGCGGCCA...CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | AGAGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCGGTGGCGGGTCAGGCTaGGGAGCTCGTGGATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RVCGRPKERCTCVASWGSGGGSG*GARGCH Trigger: ATGGCATCCACGAGCTCCGCAGCCTGACCCGCCACC...GCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | AGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCCTCGGCGTTATGAATaGAGTGGCAGCGGGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SVRETERKVHLCGQLGELPRRYE*SGSGAR Trigger: ACGGGCCCCGCTGCCACTTCATTCATAACGCCGAGG...CAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGTCACCCCACCAATGGGCAGGCGTCTTaGGTTGTCCAAGGTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KVHLCGQLGELLVAGHPTNGQAS*VVQGRG Trigger: TCCCCTACCTTGGACAACTCAAGACGCCTGCCCATT...GGTGGGGTGACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | TGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTATCGGGCAGAGTAGGTaGGCCCAAGAGGTCATCGGC | + |
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Preference number: 4 (lower is better) Translates to: CAGDRKKGALVWPAGGAAIGQSR*AQEVIG Trigger: GCCGATGACCTCTTGGGCTCACCTACTCTGCCCGAT...AGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | AGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGGCTGGAGCTGGAGCTaGTCAGATAGCCCTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPKERCTCVASWGSCWLRGWSWS*SDSPRG Trigger: ACCACGAGGGCTATCTGAGCAGCTCCAGCTCCAGCC...CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| 3UTR CAA 72 bp | AGGAAGAGTGTGCGGGAGACCGAAAGAAAGGTGCACTaGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: RKSVRETERKVH*CGQLGELLVAG Trigger: ACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | AGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGTCGCCAGCTCCTGGCTaGAAAAGGCGAAGGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: RPKERCTCVASWGSCWLRSPAPG*KRRRGY Trigger: ATAACCCCTTCGCCTTTTCCAGCCAGGAGCTGGCGA...CCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | TTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGTTCGGGCCTCGGCGTTATGAATaGAGTGGCAGCGGGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSLETYTNPGKISQQGFGPRRYE*SGSGAR Trigger: ACGGGCCCCGCTGCCACTTCATTCATAACGCCGAGG...CCCGAACCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | GTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACTGTCCAGCAGCCCCGTaGCAGCGGCGGTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VKTFVQLVQPLSLETYTNCPAAP*QRRWQR Trigger: CCGCTGCCACCGCCGCTGCCACGGGGCTGCTGGACA...GTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | TCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCTGTCCAGCAGCCCCGTaGCAGCGGCGGTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SKPSSNLFNLCPWRPTQTCPAAP*QRRWQR Trigger: CCGCTGCCACCGCCGCTGCCACGGGGCTGCTGGACA...GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | CAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGGCCGGAAGAGGAAAGTaGTGGGGGAGCCTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPLSLETYTNPGKISQQGAGRGK*WGSLPQ Trigger: CTGGGGGAGGCTCCCCCACCACTTTCCTCTTCCGGC...CCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | TCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGAAGCAGGGGTGCCCACTaGCTTCCTGTCCAGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSNLFNLCPWRPTQTQARSRGAH*LPVQQA Trigger: TGCCTGCTGGACAGGAAGGCAGTGGGCACCCCTGCT...TCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | AAAGATGGAACTCTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGGGCAGAGTGACCGAGTaGCTGCGAGGGAAGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: KDGTLLCVVKWAMKWRERGRVTE*LRGKPP Trigger: CGGGGGCTTCCCTCGCAGGCACTCGGTCACTCTGCC...CCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAGAGTTCCATCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | TCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTATGGAGCTGGGCAGAGTaGCCGAGTGCCTGCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SNLFNLCPWRPTQTQARLWSWAE*PSACEG Trigger: TCCCTCGCAGGCACTCGGTCACTCTGCCCAGCTCCA...TAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR TCA 90 bp | TCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCTGGAGCTGGGCAGAGTaGCCGAGTGCCTGCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SKPSSNLFNLCPWRPTQTWSWAE*PSACEG Trigger: TCCCTCGCAGGCACTCGGTCACTCTGCCCAGCTCCA...GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR GCA 90 bp | TCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGAGGCTGGAGCTGGAGCTaGTCAGATAGCCCTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSNLFNLCPWRPTQTQARGWSWS*SDSPRG Trigger: ACCACGAGGGCTATCTGAGCAGCTCCAGCTCCAGCC...TCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | GTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCGGCTGGAGTTGACCTaGCCGCTCCCAGGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VKTFVQLVQPLSLETYTNRLELT*PLPGCF Trigger: GAAGCAGCCTGGGAGCGGCCAGGTCAACTCCAGCCG...GTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | ACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCCTGAGCCACTGTGGCTaGAGCTGGAGCTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TFVQLVQPLSLETYTNPGLSHCG*SWSCSD Trigger: ATCTGAGCAGCTCCAGCTCCAGCCACAGTGGCTCAG...GCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CCA 90 bp | CAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGCTGAGCCACTGTGGCTaGAGCTGGAGCTGCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLSLETYTNPGKISQQGLSHCG*SWSCSD Trigger: ATCTGAGCAGCTCCAGCTCCAGCCACAGTGGCTCAG...CCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACATGTAGCGGCTGGAGTTaGCCTGGCCGCTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVKTFVQLVQPLSLETYTCSGWS*PGRSQA Trigger: AGCCTGGGAGCGGCCAGGTCAACTCCAGCCGCTACA...TGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACAGGGGTTCGGGTCAAGTCAAAAATGGTaGCGGACACGAGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLETYTNPGKISQQGFGSSQKW*RTRGWW Trigger: CCACCACCCTCGTGTCCGCCACCATTTTTGACTTGA...CCCGAACCCCTGTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCGGCTGGAGTTGACCTaGCCGCTCCCAGGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSPTYVKTFVQLVQPLSRLELT*PLPGCF Trigger: GAAGCAGCCTGGGAGCGGCCAGGTCAACTCCAGCCG...GGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGGTTTCAAGCCAGAAGCTAAAGCTATGCTaGAGGCGGGGACGGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLCVVKWAMKWRERVSSQKLKLC*RRGRSA Trigger: CGCTGACCGTCCCCGCCTCCAGCATAGCTTTAGCTT...CTGGCTTGAAACCCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAAGGAAGAGGAAAGTGGTaGGGGAGCCTCCCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQPLSLETYTNPGKISQGRGKW*GSLPQA Trigger: TGCCTGGGGGAGGCTCCCCCACCACTTTCCTCTTCC...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCGGAAGAGGAAAGTGGTaGGGGAGCCTCCCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPSSNLFNLCPWRPTQTGRGKW*GSLPQA Trigger: TGCCTGGGGGAGGCTCCCCCACCACTTTCCTCTTCC...GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGGTTTCAAGCCAGGAGGGGATTCGGACATaGGCCGGAAGAGGAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCVVKWAMKWRERVSSQEGIRT*AGRGKW Trigger: CCACTTTCCTCTTCCGGCCCATGTCCGAATCCCCTC...CTGGCTTGAAACCCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGAGAGGGGATTCGGACATaGGCCGGAAGAGGAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSNLFNLCPWRPTQTQAREGIRT*AGRGKW Trigger: CCACTTTCCTCTTCCGGCCCATGTCCGAATCCCCTC...TCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTATCGGGCAGAGTAGGTaGGCCCAAGAGGTCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLVQPLSLETYTNPGKISIGQSR*AQEVIG Trigger: GCCGATGACCTCTTGGGCTCACCTACTCTGCCCGAT...ACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | AAAGATGGAACTCTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGCAAGGTAGGGGAGTCTaGGCCACTGTGGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KDGTLLCVVKWAMKWRERQGRGV*ATVAGA Trigger: AGCTCCAGCCACAGTGGCTCAGACTCCCCTACCTTG...CCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAGAGTTCCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | TTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTGGCAGAGTGACCGAGTaGCTGCGAGGGAAGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNHEVPLMSKPSSNLFNLGRVTE*LRGKPP Trigger: CGGGGGCTTCCCTCGCAGGCACTCGGTCACTCTGCC...AAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCACAGTGACAAAGTTAGATTACAAGGCACTAAGTTGCTTCTGTAAACGGGGTGGCGGGTCAGGCTaGGGAGCTCGTGGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVTVTKLDYKALSCFCKRGGGSG*GARGCH Trigger: ATGGCATCCACGAGCTCCGCAGCCTGACCCGCCACC...CCGTTTACAGAAGCAACTTAGTGCCTTGTAATCTAACTTTGTCACTGTGACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGGTTTCAAGCCAGGAGAATCCTGAGGGCTaGGGGGAGAGTCAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCVVKWAMKWRERVSSQENPEG*GESQTC Trigger: ACATGTTTGACTCTCCCCCCAGCCCTCAGGATTCTC...CTGGCTTGAAACCCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAAAATGGGCAGGCGTCTTaGGTTGTCCAAGGTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVQPLSLETYTNPGKISQNGQAS*VVQGRG Trigger: TCCCCTACCTTGGACAACTCAAGACGCCTGCCCATT...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | TATGAATTGGGGAACTTTAGCACCAAAATCAAGTCTCTCATAGTCCATCTAGTTTGGCCGCTCCCAGGCTaGTTCTGGGTGGGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YELGNFSTKIKSLIVHLVWPLPG*FWVGSS Trigger: GCTGCTGCCCACCCAGAAGCAGCCTGGGAGCGGCCA...AACTAGATGGACTATGAGAGACTTGATTTTGGTGCTAAAGTTCCCCAATTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGAACTCTGTTATGCGTGGTTAAGTGGGCTATGAAATGGAGGGAGAGGCGCTCAAGTCAAAAATaGTGGCGGACACGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDGTLLCVVKWAMKWRERRSSQK*WRTRGW Trigger: CCACCCTCGTGTCCGCCACCATTTTTGACTTGAGCG...CCTCTCCCTCCATTTCATAGCCCACTTAACCACGCATAACAGAGTTCCATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCGCTCAAGTCAAAAATaGTGGCGGACACGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPSSNLFNLCPWRPTQTRSSQK*WRTRGW Trigger: CCACCCTCGTGTCCGCCACCATTTTTGACTTGAGCG...GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTATCGCCAGCTCCTGGCTaGAAAAGGCGAAGGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLFNLCPWRPTQTQARLSPAPG*KRRRGY Trigger: ATAACCCCTTCGCCTTTTCCAGCCAGGAGCTGGCGA...TAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTGCCGGAAGAGGAAAGTaGTGGGGGAGCCTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNHEVPLMSKPSSNLFNLAGRGK*WGSLPQ Trigger: CTGGGGGAGGCTCCCCCACCACTTTCCTCTTCCGGC...AAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACACTGAGAAGCTGGTTCTaGTGGAACTTGGAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVKTFVQLVQPLSLETYTLRSWF*WNLELG Trigger: GCCCAGCTCCAAGTTCCATCAGAACCAGCTTCTCAG...TGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | TATGAATTGGGGAACTTTAGCACCAAAATCAAGTCTCTCATAGTCCATCTAGTTTGTAGCGGCTGGAGTTaGCCTGGCCGCTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YELGNFSTKIKSLIVHLVCSGWS*PGRSQA Trigger: AGCCTGGGAGCGGCCAGGTCAACTCCAGCCGCTACA...AACTAGATGGACTATGAGAGACTTGATTTTGGTGCTAAAGTTCCCCAATTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | TCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCGGAGAGTCAAACATGTaGGGGGATTCGGACATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSPTYVKTFVQLVQPLSGESNM*GDSDMG Trigger: GCCCATGTCCGAATCCCCTCACATGTTTGACTCTCC...GGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTAGATGGAGAGTCTGCTaGAAATGGGCAGGCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLVQPLSLETYTNPGKISRWRVC*KWAGVL Trigger: CAAGACGCCTGCCCATTTTCAGCAGACTCTCCATCT...ACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTATCAAGTCAAAAATGGTaGCGGACACGAGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFNLCPWRPTQTQARLSSQKW*RTRGWW Trigger: CCACCACCCTCGTGTCCGCCACCATTTTTGACTTGA...TAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAAGAGAATCCTGAGGGCTaGGGGGAGAGTCAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQPLSLETYTNPGKISQENPEG*GESQTC Trigger: ACATGTTTGACTCTCCCCCCAGCCCTCAGGATTCTC...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| 3UTR CAA 72 bp | AGAGGGTTTCAAGCCAGAAGCTACCAACAAATTGACTaGTCCTTATGTGGGGAAGAGATGGGGTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGFQARSYQQID*SLCGEEMGWRG Trigger: ACCTCTCCACCCCATCTCTTCCCCACATAAGGACAAGTCAATTTGTTGGTAGCTTCTGGCTTGAAACCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAATGGGAGTGCTGTAGTTaGGCATCTTGTTACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVQPLSLETYTNPGKISQWECCS*ASCYPC Trigger: GCAAGGGTAACAAGATGCTCAACTACAGCACTCCCA...TTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACTGGGAGTGCTGTAGTTaGGCATCTTGTTACCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKTFVQLVQPLSLETYTNWECCS*ASCYPC Trigger: GCAAGGGTAACAAGATGCTCAACTACAGCACTCCCA...GTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR TCA 90 bp | TCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCAGATGGAGAGTCTGCTaGAAATGGGCAGGCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSPTYVKTFVQLVQPLSRWRVC*KWAGVL Trigger: CAAGACGCCTGCCCATTTTCAGCAGACTCTCCATCT...GGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCACAGTGACAAAGTTAGATTACAAGGCACTAAGTTGCTTCTGTAAACGGAAGCTAAAGCTATGCTaGAGGCGGGGACGGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVTVTKLDYKALSCFCKRKLKLC*RRGRSA Trigger: CGCTGACCGTCCCCGCCTCCAGCATAGCTTTAGCTT...CCGTTTACAGAAGCAACTTAGTGCCTTGTAATCTAACTTTGTCACTGTGACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | TATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAAAGGTGCACTTGTGTaGCCAGCTGGGAGTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YVKTFVQLVQPLSLETYTKGALV*PAGSAV Trigger: TACAGCACTCCCAGCTGGCCACACAAGTGCACCTTT...TGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219642.2 |
||
| CDS-3UTR TCA 90 bp | AAATTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCAAGGTAGGGGAGTCTaGGCCACTGTGGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLNHEVPLMSKPSSNLFNQGRGV*ATVAGA Trigger: AGCTCCAGCCACAGTGGCTCAGACTCCCCTACCTTG...GTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAGCATCTTGTTACCCTTaGATAAAACTTCGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSNLFNLCPWRPTQTQAASCYP*IKLRSS Trigger: ACTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGC...TGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCACAGTGACAAAGTTAGATTACAAGGCACTAAGTTGCTTCTGTAAACGGGCAAAGCTAAAGCTATaGTGGAGGCGGGGACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVTVTKLDYKALSCFCKRAKLKL*WRRGRS Trigger: TGACCGTCCCCGCCTCCAGCATAGCTTTAGCTTTGC...CCGTTTACAGAAGCAACTTAGTGCCTTGTAATCTAACTTTGTCACTGTGACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| 3UTR CAA 72 bp | CACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTaGTTCAACCTTTGTCCCTGGAGACCTACACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HEVPLMSKPSSN*FNLCPWRPTQT Trigger: GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR GCA 90 bp | CGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATGCATCTTGTTACCCTTaGATAAAACTTCGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPTCSTFVPGDLHKPRQDASCYP*IKLRSS Trigger: ACTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGC...ATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR TCA 90 bp | AAATTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACGGAGAGTCAAACATGTaGGGGGATTCGGACATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNHEVPLMSKPSSNLFNGESNM*GDSDMG Trigger: GCCCATGTCCGAATCCCCTCACATGTTTGACTCTCC...GTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACGCAAAGCTAAAGCTATaGTGGAGGCGGGGACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNHEVPLMSKPSSNLFNAKLKL*WRRGRS Trigger: TGACCGTCCCCGCCTCCAGCATAGCTTTAGCTTTGC...GTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR GCA 90 bp | TTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTAGACCGAAAGAAAGGTaGACTTGTGTGGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNHEVPLMSKPSSNLFNLRPKER*TCVASW Trigger: CCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCT...AAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219642.2 |
||
| 3UTR CAA 72 bp | ACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTaGTCCCTGGAGACCTACACAAACCCAGGCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TYVKTFVQLVQP*SLETYTNPGKI Trigger: AATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTCAACGCATCTTGTTACCCTTaGATAAAACTTCGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNLCPWRPTQTQARLVNASCYP*IKLRSS Trigger: ACTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGC...GTTGACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACTCAAGTCAAAAATGGTaGCGGACACGAGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLNHEVPLMSKPSSNLFNSSQKW*RTRGWW Trigger: CCACCACCCTCGTGTCCGCCACCATTTTTGACTTGA...GTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
||
| 3UTR CAA 72 bp | AAAGCTACTTCTACAGGAAATCGTTTTACACAGATATaGTATGTGGAATGCAGACCATTAACTGCTCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KATSTGNRFTQI*YVECRPLTAHP Trigger: GGGGTGAGCAGTTAATGGTCTGCATTCCACATACAATATCTGTGTAAAACGATTTCCTGTAGAAGTAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021552.3 |
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| CDS TCA 90 bp | CTCGCCCCCTTCGGAGAAAGAGCGGTCTCGAAAGCGGCTGTCGCGTaGGCTCAGGGACGGGGCCGGCTCACCCTTAAGGCTGCTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LAPFGERAVSKAAVA*AQGRGRLTLKAAEK Trigger: CTTCTCAGCAGCCTTAAGGGTGAGCCGGCCCCGTCCCTGAGCTCACGCGACAGCCGCTTTCGAGACCGCTCTTTCTCCGAAGGGGGCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS TCA 90 bp | AGGGACGGGGCCGGCTCACCCTTAAGGCTGCTGAGAAGCTGGTTCTaGTGGAACTTGGAGCTGGGCAGAGTGACCGAGTGCCTGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RDGAGSPLRLLRSWF*WNLELGRVTECLRG Trigger: CCCTCGCAGGCACTCGGTCACTCTGCCCAGCTCCAAGTTCCATCAGAACCAGCTTCTCAGCAGCCTTAAGGGTGAGCCGGCCCCGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | AGAGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCAGCTCCGTCTTGTACTaGGGGTGGCGGGTCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RVCGRPKERCTCVASWGSSSVLY*GWRVRL Trigger: CAGCCTGACCCGCCACCCCAAGTACAAGACGGAGCT...GCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS CCA 90 bp | AGCTGCTCAGATAGCCCTCGTGGTCCGAGAGAGAATCCTGAGGGCTaGGGGGAGAGTCAAACATGTGAGGGGATTCGGACATGGGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: SCSDSPRGPRENPEG*GESQTCEGIRTWAG Trigger: TCCGGCCCATGTCCGAATCCCCTCACATGTTTGACTCTCCCCCCAGCCCTCAGGATTCTCTCTCGGACCACGAGGGCTATCTGAGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | AGTGTGCGGGAGACCGAAAGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGAAGGCGAAGGGGTTATaGGTGCCATCGGGCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SVRETERKVHLCGQLGELKAKGL*VPSGRV Trigger: TACTCTGCCCGATGGCACCAATAACCCCTTCGCCTT...CAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCTTTCGGTCTCCCGCACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGGTGCACTTGTGTGGCCAGCTGGGGGAGCTGCTGGTTGCGGGTCACCCCAGCATCTTGTTACCCTaGCATAAAACTTCGCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: RKVHLCGQLGELLVAGHPSILLP*HKTSLK Trigger: CTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGCT...GGGGTGACCCGCAACCAGCAGCTCCCCCAGCTGGCCACACAAGTGCACCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | CCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAGGCAGGCGTCTTGAGTaGTCCAAGGTAGGGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PSSNLFNLCPWRPTQTQAGRRLE*SKVGES Trigger: AGACTCCCCTACCTTGGACAACTCAAGACGCCTGCC...TGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | CAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAGTAGCTCCGTCTTGTACTaGGGGTGGCGGGTCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QLVQPLSLETYTNPGKISSSVLY*GWRVRL Trigger: CAGCCTGACCCGCCACCCCAAGTACAAGACGGAGCT...ACTAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | TCAAAACCTTCGTCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCAAGGCGAAGGGGTTATaGGTGCCATCGGGCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SKPSSNLFNLCPWRPTQTKAKGL*VPSGRV Trigger: TACTCTGCCCGATGGCACCAATAACCCCTTCGCCTT...GGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGACGAAGGTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | TATGAATTGGGGAACTTTAGCACCAAAATCAAGTCTCTCATAGTCCATCTAGTTGGCAGGCGTCTTGAGTaGTCCAAGGTAGGGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: YELGNFSTKIKSLIVHLVGRRLE*SKVGES Trigger: AGACTCCCCTACCTTGGACAACTCAAGACGCCTGCC...AACTAGATGGACTATGAGAGACTTGATTTTGGTGCTAAAGTTCCCCAATTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS-3UTR CAA 90 bp | TCCAACTTGTTCAACCTTTGTCCCTGGAGACCTACACAAACCCAGGCAAGATTAAGCATCTTGTTACCCTaGCATAAAACTTCGCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: SNLFNLCPWRPTQTQARLSILLP*HKTSLK Trigger: CTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGCT...TAATCTTGCCTGGGTTTGTGTAGGTCTCCAGGGACAAAGGTTGAACAAGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
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| CDS-3UTR CAA 90 bp | AAATCACGAAGTCCCACTTATGTCAAAACCTTCGTCCAACTTGTTCAACCTTTGAGCATCTTGTTACCCTaGCATAAAACTTCGCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: KSRSPTYVKTFVQLVQPLSILLP*HKTSLK Trigger: CTTGAGCGAAGTTTTATGCAAGGGTAACAAGATGCT...CAAAGGTTGAACAAGTTGGACGAAGGTTTTGACATAAGTGGGACTTCGTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000219642.2 |
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| CDS CCA 72 bp | GCGGCACTGGGAAACCCAGCAAAGCTAAAGCTATGCTaGAGGCGGGGACGGTCAGCGGAGAGGTCTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AALGNPAKLKLC*RRGRSAERSRP Trigger: GGGCCGAGACCTCTCCGCTGACCGTCCCCGCCTCCAGCATAGCTTTAGCTTTGCTGGGTTTCCCAGTGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS TCA 72 bp | GAAGCTGGTTCTGATGGAACTTGGAGCTGGGCAGAGTaGCCGAGTGCCTGCGAGGGAAGCCCCCGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EAGSDGTWSWAE*PSACEGSPRQQ Trigger: CTGCTGGCGGGGGCTTCCCTCGCAGGCACTCGGTCACTCTGCCCAGCTCCAAGTTCCATCAGAACCAGCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS TCA 72 bp | TTCGGAGAAAGAGCGGTCTCGAAAGCGGCTGTCGCGTaGGCTCAGGGACGGGGCCGGCTCACCCTTAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FGERAVSKAAVA*AQGRGRLTLKA Trigger: AGCCTTAAGGGTGAGCCGGCCCCGTCCCTGAGCTCACGCGACAGCCGCTTTCGAGACCGCTCTTTCTCCGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS GCA 72 bp | GCAGCGGCACTGGGAAACCCAGCAAAGCTAAAGCTATaGTGGAGGCGGGGACGGTCAGCGGAGAGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: AAALGNPAKLKL*WRRGRSAERSR Trigger: CCGAGACCTCTCCGCTGACCGTCCCCGCCTCCAGCATAGCTTTAGCTTTGCTGGGTTTCCCAGTGCCGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS TCA 72 bp | GGCGAAGGGGTTATTGGTGCCATCGGGCAGAGTAGGTaGGCCCAAGAGGTCATCGGCGCTCAGGATAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GEGVIGAIGQSR*AQEVIGAQDRG Trigger: CCCCCTATCCTGAGCGCCGATGACCTCTTGGGCTCACCTACTCTGCCCGATGGCACCAATAACCCCTTCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS CAA 90 bp | GCAAAGAGGCTCGCCAGCTCCTGGCTGGAAAAGGCGAAGGGGTTATaGGTGCCATCGGGCAGAGTAGGTGAGCCCAAGAGGTCATCGGCG | + |
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Preference number: 6 (lower is better) Translates to: AKRLASSWLEKAKGL*VPSGRVGEPKRSSA Trigger: CGCCGATGACCTCTTGGGCTCACCTACTCTGCCCGATGGCACCAATAACCCCTTCGCCTTTTCCAGCCAGGAGCTGGCGAGCCTCTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS TCA 72 bp | CCAGCAGGCAGCCCCCAGCGCTGGGAGTGCTGTAGTTaGGCATCTTGTTACCCTTGCATAAAACTTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PAGSPQRWECCS*ASCYPCIKLRS Trigger: TGAGCGAAGTTTTATGCAAGGGTAACAAGATGCTCAACTACAGCACTCCCAGCGCTGGGGGCTGCCTGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 |
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| CDS CAA 72 bp | ATGGAGAGTCTGCTGAAAATGGGCAGGCGTCTTGAGTaGTCCAAGGTAGGGGAGTCTGAGCCACTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MESLLKMGRRLE*SKVGESEPLWL Trigger: CAGCCACAGTGGCTCAGACTCCCCTACCTTGGACAACTCAAGACGCCTGCCCATTTTCAGCAGACTCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021552.3 ENSMUST00000165114.2 ENSMUST00000218835.2 |
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| CDS TCA 72 bp | AGGTGCACTTGTGTGGCCAGCTGGGAGTGCTGTAGTTaGGCATCTTGTTACCCTTGCATAAAACTTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCTCVASWECCS*ASCYPCIKLRS Trigger: TGAGCGAAGTTTTATGCAAGGGTAACAAGATGCTCAACTACAGCACTCCCAGCTGGCCACACAAGTGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219642.2 |
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