Pregenerated sensors for ZFP367 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044934Ensembl transcript IDs: ENSMUST00000059817.12, ENSMUST00000117241.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTaGAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TGVHIHAPVARLHRL*KINHSGPAAEQCAK Trigger: TTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR GCA 90 bp | TGTCTTATTCACAAAGTGCTTCCTGTGAGAACTGCTTCCAATGAATaGATTAAACTTGCAAAACCTAGCTTCCCACAACTTGTAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CLIHKVLPVRTASNE*IKLAKPSFPQLVAS Trigger: AGAAGCTACAAGTTGTGGGAAGCTAGGTTTTGCAAGTTTAATGCATTCATTGGAAGCAGTTCTCACAGGAAGCACTTTGTGAATAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 90 bp | GCTAAACTTAGTGAACACAAAATAGCTTGGCATGTTATTCTGAAGTaGAGCAGAAAGGTGGCAATATGCACTGAAAATATAAATATGGAG | + |
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Preference number: 1 (lower is better) Translates to: AKLSEHKIAWHVILK*SRKVAICTENINME Trigger: CTCCATATTTATATTTTCAGTGCATATTGCCACCTTTCTGCTTCACTTCAGAATAACATGCCAAGCTATTTTGTGTTCACTAAGTTTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 90 bp | AAACAAGTTCTTAAGTCAAATATTCTCAGAGAAAGATTTTTATGCTaGCCTCCTTGTTGCCATTCATGTTGCCTCCTTGTTGCAAATTCA | + |
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Preference number: 1 (lower is better) Translates to: KQVLKSNILRERFLC*PPCCHSCCLLVANS Trigger: TGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATAAAAATCTTTCTCTGAGAATATTTGACTTAAGAACTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR CAA 90 bp | AGAATCCTGACGGGTCACAGGGGCTCTGAGTACTACAGCAAAGGTTaGGGTTCCACACTCAGGATGATACTAGCCTCCATCTATGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: RILTGHRGSEYYSKG*GSTLRMILASIYEV Trigger: AACTTCATAGATGGAGGCTAGTATCATCCTGAGTGTGGAACCCAAACCTTTGCTGTAGTACTCAGAGCCCCTGTGACCCGTCAGGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CCA 90 bp | CACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTCGGCCTCCCATTTCTCTaGACTTATTGGCCATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: HNFSFTLALLKTFLPSTLGLPFL*TYWPCY Trigger: ATAGCATGGCCAATAAGTCCAGAGAAATGGGAGGCC...GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGACAACACTGGATCCCAAGCACTCATaGCAACTCTACAGGAAATTA | + |
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Preference number: 2 (lower is better) Translates to: FQGSLLYIASSRTARTTLDPKHS*QLYRKL Trigger: TAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATC...CAGTGTTGTCCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAATCCTGACGGGTCACAGGGGCTCTGAGTACTACAGCAAAGGTTTGGGTTGTTGCCATTCATGTTaGCTCCTTGTTGCAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: KRILTGHRGSEYYSKGLGCCHSC*LLVANS Trigger: TGAATTTGCAACAAGGAGGCAACATGAATGGCAACA...ACCCAAACCTTTGCTGTAGTACTCAGAGCCCCTGTGACCCGTCAGGATTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGGTACAACTTGAAGACTaGAAAAAGAGAATCCTGACG | + |
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Preference number: 2 (lower is better) Translates to: LCEFQGSLLYIASSRTARVQLED*KKRILT Trigger: CGTCAGGATTCTCTTTTTCCAGTCTTCAAGTTGTAC...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR CAA 90 bp | ACACTCAGGATGATACTAGCCTCCATCTATGAAGTTGGTCCCAGATaGTTTGTTCTAGGAGTTCCAGGGGAAGGTCAAGTAAGCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TLRMILASIYEVGPR*FVLGVPGEGQVSFS Trigger: GGAAAAGCTTACTTGACCTTCCCCTGGAACTCCTAGAACAAACAATCTGGGACCAACTTCATAGATGGAGGCTAGTATCATCCTGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR TCA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCCTCTCTCACCCCATCTaGGGCAACAACATTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTLSHPI*GNNILH Trigger: ATGAAGAATGTTGTTGCCTCAGATGGGGTGAGAGAG...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCTGTCTCACACTGCTCTaGTTCAGTGTTTACAGTACT | + |
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Preference number: 2 (lower is better) Translates to: ARLITQVQQLSNVQKSPVCLTLL*FSVYST Trigger: AGTACTGTAAACACTGAAGCAGAGCAGTGTGAGACA...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CCA 90 bp | CTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACATCTTTCCAAATAGTTaGCCTCCCATTTCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LPQLQLHIGASQDISSLHIFPNS*PPISLD Trigger: GTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGAT...GTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR TCA 90 bp | CTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACGGTGGCAATATGCACTaGAAATATAAATATGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPQLQLHIGASQDISSLHGGNMH*KYKYGG Trigger: GCCTCCATATTTATATTTTCAGTGCATATTGCCACC...GTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR TCA 90 bp | CACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTCCATGTTATTCTGAAGTaGAGCAGAAAGGTGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: HNFSFTLALLKTFLPSTLHVILK*SRKVAI Trigger: TATTGCCACCTTTCTGCTTCACTTCAGAATAACATG...GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | CACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTCGATAAGCAAATAAGGTaGTTAGCTTATGCCCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: HNFSFTLALLKTFLPSTLDKQIR*LAYAQG Trigger: TCCTTGGGCATAAGCTAAGCACCTTATTTGCTTATC...GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CCA 90 bp | TACAACCTATCATACATGCCTTTAATCCCTGCAGATCAGAGGCAGACTCAGATACCCAAAGACATCTTCTaGGAGACCACACACAAACAC | + |
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Preference number: 2 (lower is better) Translates to: YNLSYMPLIPADQRQTQIPKDIF*ETTHKH Trigger: GTGTTTGTGTGTGGTCTCCCAGAAGATGTCTTTGGG...TATCTGAGTCTGCCTCTGATCTGCAGGGATTAAAGGCATGTATGATAGGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGGAAACAACAGTGACATaGTTATCAATAAATACCTGC | + |
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Preference number: 2 (lower is better) Translates to: LCEFQGSLLYIASSRTARETTVT*LSINTC Trigger: GCAGGTATTTATTGATAACCATGTCACTGTTGTTTC...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR TCA 90 bp | AAACACAAGTGCCAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACAGCATCAGCATTACAGTaGGTTAAAAAGCCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: KHKCQSHYRAHNRSHWCTASALQ*VKKPRK Trigger: CTTCCTGGGCTTTTTAACTCACTGTAATGCTGATGC...TGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCACTTGTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCTTTCTCTGGACTTATTaGCCATGCTATTCTGCAATT | + |
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Preference number: 2 (lower is better) Translates to: ARLITQVQQLSNVQKSPVFLWTY*PCYSAI Trigger: AATTGCAGAATAGCATGGCCAATAAGTCCAGAGAAA...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCACTGCTTCCAATGAATaGATTAAACTTGCAAAACCT | + |
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Preference number: 2 (lower is better) Translates to: ARLITQVQQLSNVQKSPVTASNE*IKLAKP Trigger: AGGTTTTGCAAGTTTAATGCATTCATTGGAAGCAGT...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCACATATGTCTCACACTaGTCTGCTTCAGTGTTTACA | + |
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Preference number: 2 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTTYVSH*SASVFT Trigger: TGTAAACACTGAAGCAGAGCAGTGTGAGACATATGT...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATCATAAAAGAGGTGGCTaGTTGGCCCCTAGAATTCTA | + |
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Preference number: 2 (lower is better) Translates to: HIILTTTTSASHWRFSRHHKRGG*LAPRIL Trigger: TAGAATTCTAGGGGCCAAGCAGCCACCTCTTTTATG...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR GCA 90 bp | AAACACAAGTGCCAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACAAAGGTGCTTAGCTTATaGCCAAGGATCTACTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: KHKCQSHYRAHNRSHWCTKVLSL*PRIYFV Trigger: TACAAAGTAGATCCTTGGGCATAAGCTAAGCACCTT...TGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCACTTGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR CAA 90 bp | TCTCAGAGAAAGATTTTTATGCTGACCTCCTTGTTGCCATTCATGTaGCCTCCTTGTTGCAAATTCATGAGTGTTCCATACTTTTCAACA | + |
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Preference number: 2 (lower is better) Translates to: SQRKIFMLTSLLPFM*PPCCKFMSVPYFST Trigger: TGTTGAAAAGTATGGAACACTCATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATAAAAATCTTTCTCTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR CAA 90 bp | AAAGATTTTTATGCTGACCTCCTTGTTGCCATTCATGTTGCCTCCTaGTTGCAAATTCATGAGTGTTCCATACTTTTCAACAGTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: KDFYADLLVAIHVAS*LQIHECSILFNSET Trigger: TGTTTCACTGTTGAAAAGTATGGAACACTCATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATAAAAATCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCCAGAACTGCCAGGACAACACTGTAAGACCCTGTTTACAAATAAATAAAGAAAGATTTTTATGCTaGCCTCCTTGTTGCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: KFQNCQDNTVRPCLQINKERFLC*PPCCHS Trigger: TGAATGGCAACAAGGAGGTCAGCATAAAAATCTTTC...TTTATTTATTTGTAAACAGGGTCTTACAGTGTTGTCCTGGCAGTTCTGGAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCTGCTGGGCAGTACTTTaGTACAGTGAAGAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ARLITQVQQLSNVQKSPVCWAVL*YSEESV Trigger: CACTGACTCTTCACTGTACAAAAGTACTGCCCAGCA...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGACAACACTGCATGTTGCCTCCTTGTaGCAAATTCATGAGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: FQGSLLYIASSRTARTTLHVASL*QIHECS Trigger: GGAACACTCATGAATTTGCAACAAGGAGGCAACATG...CAGTGTTGTCCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAGAATCCTGACGGGTCACAGGGGCTCTGAGTACTACAGCAAAGGTTTGGGTATTCATGTTGCCTCCTaGTTGCAAATTCATGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: KRILTGHRGSEYYSKGLGIHVAS*LQIHEC Trigger: ACACTCATGAATTTGCAACAAGGAGGCAACATGAAT...ACCCAAACCTTTGCTGTAGTACTCAGAGCCCCTGTGACCCGTCAGGATTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR TCA 72 bp | GTTCAGTACAACTTGAAGACTGGAAAAAGAGAATCCTaGCGGGTCACAGGGGCTCTGAGTACTACAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VQYNLKTGKRES*RVTGALSTTAK Trigger: CTTTGCTGTAGTACTCAGAGCCCCTGTGACCCGTCAGGATTCTCTTTTTCCAGTCTTCAAGTTGTACTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCAGAATGGCTAAAGGAAGAAGTGAGGCCTCCTGTAAAGAGCAGAGAAGCTTGTTGCCATTCATGTaGCCTCCTTGTTGCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: MSRMAKGRSEASCKEQRSLLPFM*PPCCKF Trigger: GAATTTGCAACAAGGAGGCAACATGAATGGCAACAA...GCTTCTCTGCTCTTTACAGGAGGCCTCACTTCTTCCTTTAGCCATTCTGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR GCA 72 bp | CACATACATGCACCAGTTGCCAGGTTACATAGACTTTaGAAGATTAATCACTCAGGTCCAGCAGCTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: HIHAPVARLHRL*KINHSGPAAEQ Trigger: TTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR GCA 72 bp | TCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTaGCAGGACAACACTGTAAGACCCTGTTTACAAATA | + |
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Preference number: 3 (lower is better) Translates to: SGQPTLHSKFQN*QDNTVRPCLQI Trigger: TATTTGTAAACAGGGTCTTACAGTGTTGTCCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR CCA 72 bp | TGCCAATCTCATTACAGGGCCCATAATAGATCTCACTaGTGTACACATACATGCACCAGTTGCCAGGTTACA | + |
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Preference number: 3 (lower is better) Translates to: CQSHYRAHNRSH*CTHTCTSCQVT Trigger: TGTAACCTGGCAACTGGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CAA 90 bp | TACAACCTATCATACATGCCTTTAATCCCTGCAGATCAGAGGCAGACTCAGATAGAAGTTGGTCCCAGATaGTTTGTTCTAGGAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: YNLSYMPLIPADQRQTQIEVGPR*FVLGVP Trigger: TGGAACTCCTAGAACAAACAATCTGGGACCAACTTC...TATCTGAGTCTGCCTCTGATCTGCAGGGATTAAAGGCATGTATGATAGGTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR GCA 72 bp | CTGACCTCCTTGTTGCCATTCATGTTGCCTCCTTGTTaGAAATTCATGAGTGTTCCATACTTTTCAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: LTSLLPFMLPPC*KFMSVPYFSTV Trigger: CACTGTTGAAAAGTATGGAACACTCATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR GCA 72 bp | CACAAAGTGCTTCCTGTGAGAACTGCTTCCAATGAATaGATTAAACTTGCAAAACCTAGCTTCCCACAACTT | + |
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Preference number: 3 (lower is better) Translates to: HKVLPVRTASNE*IKLAKPSFPQL Trigger: AAGTTGTGGGAAGCTAGGTTTTGCAAGTTTAATGCATTCATTGGAAGCAGTTCTCACAGGAAGCACTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CAA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATATGAATGCATTAAACTaGCAAAACCTAGCTTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: HIILTTTTSASHWRFSRHMNALN*QNLASH Trigger: GTGGGAAGCTAGGTTTTGCAAGTTTAATGCATTCAT...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CAA 90 bp | AAACACAAGTGCCAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACTATTTCAACCTTCTTaGGCTATTTGTACCAATCTG | + |
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Preference number: 3 (lower is better) Translates to: KHKCQSHYRAHNRSHWCTLFQPS*AICTNL Trigger: CAGATTGGTACAAATAGCCAAAGAAGGTTGAAATAG...TGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCACTTGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR-3UTR CAA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTGGAGAAAATGGTTTaGAACCACCAGACAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: HIILTTTTSASHWRFSRHLEKMV*NHQTRK Trigger: CTTTCTTGTCTGGTGGTTCAAAACCATTTTCTCCAA...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 72 bp | CTATTATTTCTGTCACACACAGATCCCAAGCACTCATaGCAACTCTACAGGAAATTAAGGATTATTCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LLFLSHTDPKHS*QLYRKLRIILN Trigger: GTTCAGAATAATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGAAATAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
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| 3UTR CCA 72 bp | TCGAACCCTAAACCAAGAATATTTAGATGCTATGTATaGTCGGTCTCTTATCATACTTATAAGTGCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SNPKPRIFRCYV*SVSYHTYKCSK Trigger: CTTGGAGCACTTATAAGTATGATAAGAGACCGACCATACATAGCATCTAAATATTCTTGGTTTAGGGTTCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 72 bp | TTTCACACAAATGTCTTATTCACAAAGTGCTTCCTGTaGGAACTGCTTCCAATGAATGCATTAAACTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: FHTNVLFTKCFL*ELLPMNALNLQ Trigger: TTGCAAGTTTAATGCATTCATTGGAAGCAGTTCTCACAGGAAGCACTTTGTGAATAAGACATTTGTGTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 72 bp | AGTGAACACAAAATAGCTTGGCATGTTATTCTGAAGTaGAGCAGAAAGGTGGCAATATGCACTGAAAATATA | + |
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Preference number: 3 (lower is better) Translates to: SEHKIAWHVILK*SRKVAICTENI Trigger: TATATTTTCAGTGCATATTGCCACCTTTCTGCTTCACTTCAGAATAACATGCCAAGCTATTTTGTGTTCACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| 3UTR TCA 72 bp | TGCTCAATAACTTCATCTATTTGGAGAAAATGGTTTTaGACCACCAGACAAGAAAGACACTTGCAGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSITSSIWRKWF*TTRQERHLQLK Trigger: TTTTAGCTGCAAGTGTCTTTCTTGTCTGGTGGTTCAAAACCATTTTCTCCAAATAGATGAAGTTATTGAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
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| CDS-3UTR TCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGACGGAGGCGGAGGACTaGGGCGCACCCCGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCEFQGSLLYIASSRTARTEAED*GAPRSV Trigger: GACGCTGCGGGGTGCGCCTCAGTCCTCCGCCTCCGT...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGACAACACTGCGCTTCGGGGAGTCGTaGCAGAAGACGACCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQGSLLYIASSRTARTTLRFGES*QKTTGG Trigger: GCCGCCGGTCGTCTTCTGCCACGACTCCCCGAAGCG...CAGTGTTGTCCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCACGGAGGCGGAGGACTaGGGCGCACCCCGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTTEAED*GAPRSV Trigger: GACGCTGCGGGGTGCGCCTCAGTCCTCCGCCTCCGT...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | TGCCCAAACTCTAACATAAACCCAAGCCCCAAAGACATCTTCTGGGAGACCACAGGCCGCTGTCTGGGCTaGTCGCCTCCTCCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPNSNINPSPKDIFWETTGRCLG*SPPPRP Trigger: AGGACGAGGAGGAGGCGAGCAGCCCAGACAGCGGCC...TGTGGTCTCCCAGAAGATGTCTTTGGGGCTTGGGTTTATGTTAGAGTTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | CACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTCCGCTTCGGGGAGTCGTaGCAGAAGACGACCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNFSFTLALLKTFLPSTLRFGES*QKTTGG Trigger: GCCGCCGGTCGTCTTCTGCCACGACTCCCCGAAGCG...GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGACAACACTGGTCGGATTCCATCCTTaGGGTGGCCGCTGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQGSLLYIASSRTARTTLVGFHP*GGRCLG Trigger: GCCCAGACAGCGGCCACCTCAAGGATGGAATCCGAC...CAGTGTTGTCCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCCAACAGCACTGCAGAGAAACTTCAGTGATGTTAACAACAAACAAGTTCGAGGTGGCCGCTGTCTaGGCTGCTCGCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQQHCRETSVMLTTNKFEVAAV*AARLLL Trigger: GAGGAGGAGGCGAGCAGCCCAGACAGCGGCCACCTC...GAACTTGTTTGTTGTTAACATCACTGAAGTTTCTCTGCAGTGCTGTTGGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTGCAAGATTAGGCCGCTGTCTGGGCTaGTCGCCTCCTCCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVYTYMHQLPGYIDFARLGRCLG*SPPPRP Trigger: AGGACGAGGAGGAGGCGAGCAGCCCAGACAGCGGCC...TAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | AAACACAAGTGCCAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACAGAGGTGGCCGCTGTCTaGGCTGCTCGCCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHKCQSHYRAHNRSHWCTEVAAV*AARLLL Trigger: GAGGAGGAGGCGAGCAGCCCAGACAGCGGCCACCTC...TGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCACTTGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | ACGGGTCACAGGGGCTCTGAGTACTACAGCAAAGGTTaGGGTTCCACACTCAGGATGATACTAGCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TGHRGSEYYSKG*GSTLRMILASI Trigger: GATGGAGGCTAGTATCATCCTGAGTGTGGAACCCAAACCTTTGCTGTAGTACTCAGAGCCCCTGTGACCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGAATGGCTAAAGGAAGAAGTGAGGCCTCCTGTAAAGAGCAGAGAAGCGGCGGTTTGCATGGGTaGATCTGCTTAGGCACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MSRMAKGRSEASCKEQRSGGLHG*ICLGTR Trigger: ACGGGTGCCTAAGCAGATTCACCCATGCAAACCGCC...GCTTCTCTGCTCTTTACAGGAGGCCTCACTTCTTCCTTTAGCCATTCTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCAGGGTGGGGGTGCGTTaGTCTCTCATCTCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARLITQVQQLSNVQKSPVRVGVR*SLISQY Trigger: GTACTGGGAGATGAGAGAGCAACGCACCCCCACCCT...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGTTGTTGTCCGGAGACTaGTGTTTGCTGAGTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCEFQGSLLYIASSRTARLLSGD*CLLSAS Trigger: GGACGCACTCAGCAAACACCAGTCTCCGGACAACAA...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATAAGGTGCTTAGCTTATGCCCAAGGATCTACTTTGTAAGTATGCTGGGCTCTTGCAGCCGGCGCTaGGCGCCACTCTTCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: ANKVLSLCPRIYFVSMLGSCSRR*APLFSS Trigger: CGATGAGAAGAGTGGCGCCCAGCGCCGGCTGCAAGA...GCCCAGCATACTTACAAAGTAGATCCTTGGGCATAAGCTAAGCACCTTATTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | GGGACCCAACAGCACTGCAGAGAAACTTCAGTGATGTTAACAACAAACAAGTTCCTGAGCGTCACGTTATaGGCGTTCTCACCCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTQQHCRETSVMLTTNKFLSVTL*AFSPQR Trigger: GCGCTGGGGTGAGAACGCGCATAACGTGACGCTCAG...GAACTTGTTTGTTGTTAACATCACTGAAGTTTCTCTGCAGTGCTGTTGGGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCCTTTTAGGGTGGGGGTaGGTTGCTCTCTCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLITQVQQLSNVQKSPVLLGWG*VALSSP Trigger: GGGAGATGAGAGAGCAACGCACCCCCACCCTAAAAG...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGGGGTGCTTTGGACAATaGCGGTTTGCATGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCEFQGSLLYIASSRTARGCFGQ*RFAWVN Trigger: ATTCACCCATGCAAACCGCCATTGTCCAAAGCACCC...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATGTCGGATTCCATCCTTaGGGTGGCCGCTGTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIILTTTTSASHWRFSRHVGFHP*GGRCLG Trigger: GCCCAGACAGCGGCCACCTCAAGGATGGAATCCGAC...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTGCAAGATTACTGAGCGTCACGTTATaGGCGTTCTCACCCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVYTYMHQLPGYIDFARLLSVTL*AFSPQR Trigger: GCGCTGGGGTGAGAACGCGCATAACGTGACGCTCAG...TAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATGGCCAGCTCAATGAGTaGCAGGGCCCCATGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIILTTTTSASHWRFSRHGQLNE*QGPMQP Trigger: AGGCTGCATGGGGCCCTGGCACTCATTGAGCTGGCC...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGGTAGTCACACAGGTATaGCCTCTCACCTGTATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCEFQGSLLYIASSRTARVVTQV*PLTCMS Trigger: ACTCATACAGGTGAGAGGCCATACCTGTGTGACTAC...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | CACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTCTTGTTGTCCGGAGACTaGTGTTTGCTGAGTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNFSFTLALLKTFLPSTLLLSGD*CLLSAS Trigger: GGACGCACTCAGCAAACACCAGTCTCCGGACAACAA...GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR TCA 90 bp | CTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTGCAAGATTAGGCGGTTTGCATGGGTaGATCTGCTTAGGCACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVYTYMHQLPGYIDFARLGGLHG*ICLGTR Trigger: ACGGGTGCCTAAGCAGATTCACCCATGCAAACCGCC...TAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | AAACACAAGTGCCAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACAATTCCATCCTTGAGGTaGCCGCTGTCTGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHKCQSHYRAHNRSHWCTIPSLR*PLSGLL Trigger: GAGCAGCCCAGACAGCGGCCACCTCAAGGATGGAAT...TGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTGGCACTTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | GCAAGATTAATCACTCAGGTCCAGCAGCTGAGCAATGTGCAAAAGTCTCCAGTCGGCTTTTCCACAGTCTaGGTAGTCACACAGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLITQVQQLSNVQKSPVGFSTV*VVTQVW Trigger: CCATACCTGTGTGACTACCCAGACTGTGGAAAAGCC...GACTGGAGACTTTTGCACATTGCTCAGCTGCTGGACCTGAGTGATTAATCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGAGGTGGCTGCTTGGCCCCTAGAATTCTATTCATGCCTTAGTACACAAGCTGAGTGCGTCCGTTaGCTCTTCTCTCTTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IKEVAAWPLEFYSCLSTQAECVR*LFSLQP Trigger: CGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGC...TTGTGTACTAAGGCATGAATAGAATTCTAGGGGCCAAGCAGCCACCTCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | TCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAATTAAGGATGCTGAGTGCGTCCGTTaGCTCTTCTCTCTTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVTHRSQALMTTLQEIKDAECVR*LFSLQP Trigger: CGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGC...ATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGAATGGCTAAAGGAAGAAGTGAGGCCTCCTGTAAAGAGCAGAGAAGCGACGTTGGTGGGTTTTaGGCTGTCCACTTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: MSRMAKGRSEASCKEQRSDVGGF*AVHFEQ Trigger: TTGTTCAAAGTGGACAGCTCAAAACCCACCAACGTC...GCTTCTCTGCTCTTTACAGGAGGCCTCACTTCTTCCTTTAGCCATTCTGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR GCA 90 bp | GCAAATAAGGTGCTTAGCTTATGCCCAAGGATCTACTTTGTAAGTATGCTGGGCCCTTCTGAACTAGCTTaGCTTTTAGGGTGGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANKVLSLCPRIYFVSMLGPSELA*LLGWGC Trigger: GCACCCCCACCCTAAAAGGCAAGCTAGTTCAGAAGG...GCCCAGCATACTTACAAAGTAGATCCTTGGGCATAAGCTAAGCACCTTATTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGAATGGCTAAAGGAAGAAGTGAGGCCTCCTGTAAAGAGCAGAGAAGCTTGAGCTGTCCACTTTaGACAAAGGCTTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MSRMAKGRSEASCKEQRSLSCPL*TKAFPQ Trigger: CTGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAA...GCTTCTCTGCTCTTTACAGGAGGCCTCACTTCTTCCTTTAGCCATTCTGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR GCA 90 bp | TCCATAACTTATATCATCTTTCCAAATAGTTGGCCTCCCATTTCTCTGGACTTAAGTGCCAGGGCCCCATaGAGCCTCTCTCGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SITYIIFPNSWPPISLDLSARAP*SLSRCS Trigger: AGAGCAACGAGAGAGGCTGCATGGGGCCCTGGCACT...TAAGTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGATGATATAAGTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | CCCACAACTTGTAGCTTCTACCCTGTAACTGCAATCCATATTTACAAAATAGTTCTACTGGCGGAGTGGTaGCCCTGTCAGATTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTTCSFYPVTAIHIYKIVLLAEW*PCQIGQ Trigger: CTGGCCAATCTGACAGGGGCACCACTCCGCCAGTAG...AACTATTTTGTAAATATGGATTGCAGTTACAGGGTAGAAGCTACAAGTTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCTCTTCCTCATCAGACTaGAGGTACTCCAGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTSSSSD*RYSRGS Trigger: AGACCCTCTGGAGTACCTCCAGTCTGATGAGGAAGA...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | TCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAATTAAGGATGGCTTTTCCACAGTCTaGGTAGTCACACAGGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTHRSQALMTTLQEIKDGFSTV*VVTQVW Trigger: CCATACCTGTGTGACTACCCAGACTGTGGAAAAGCC...ATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | ATATCATCTTTCCAAATAGTTGGCCTCCCATTTCTCTGGACTTATTGGCCATGCGACGTTGGTGGGTTTTaGGCTGTCCACTTTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSFQIVGLPFLWTYWPCDVGGF*AVHFEQ Trigger: TTGTTCAAAGTGGACAGCTCAAAACCCACCAACGTC...GCATGGCCAATAAGTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGATGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTCCAATGAATGCATTAAACTTGCAAAACCTAGCTTCCCACAACTTGTACTGGTGTTTGCTGAGTaGGTCCGTTGGCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TASNECIKLAKPSFPQLVLVFAE*VRWLFS Trigger: AGAGAAGAGCCAACGGACGCACTCAGCAAACACCAG...TACAAGTTGTGGGAAGCTAGGTTTTGCAAGTTTAATGCATTCATTGGAAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | ACTATTATTTCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAACAATGGCGGTTTGCATaGGTGAATCTGCTTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TIISVTHRSQALMTTLQEQWRFA*VNLLRH Trigger: GTGCCTAAGCAGATTCACCCATGCAAACCGCCATTG...TTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGAAATAATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATGGGTGCTTTGGACAATaGCGGTTTGCATGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HIILTTTTSASHWRFSRHGCFGQ*RFAWVN Trigger: ATTCACCCATGCAAACCGCCATTGTCCAAAGCACCC...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | CACATTATTCTAACTACCACAACTTCAGCTTCACATTGGCGCTTCTCAAGACATGGCATAAGGGTGCTTTaGACAATGGCGGTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HIILTTTTSASHWRFSRHGIRVL*TMAVCM Trigger: CATGCAAACCGCCATTGTCCAAAGCACCCTTATGCC...ATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CCA 90 bp | ACTATTATTTCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAGGCATAAGGGTGCTTTaGACAATGGCGGTTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TIISVTHRSQALMTTLQEGIRVL*TMAVCM Trigger: CATGCAAACCGCCATTGTCCAAAGCACCCTTATGCC...TTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGAAATAATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| 3UTR CAA 72 bp | ATGATACTAGCCTCCATCTATGAAGTTGGTCCCAGATaGTTTGTTCTAGGAGTTCCAGGGGAAGGTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MILASIYEVGPR*FVLGVPGEGQV Trigger: TACTTGACCTTCCCCTGGAACTCCTAGAACAAACAATCTGGGACCAACTTCATAGATGGAGGCTAGTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCGCGAATCCTGCTAGATaGATGCTCTCCTTCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTANPAR*MLSFIY Trigger: ATAAATGAAGGAGAGCATTCATCTAGCAGGATTCGC...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGAGGTGGCTGCTTGGCCCCTAGAATTCTATTCATGCCTTAGTACACAATTGAGCTGTCCACTTTaGACAAAGGCTTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IKEVAAWPLEFYSCLSTQLSCPL*TKAFPQ Trigger: CTGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAA...TTGTGTACTAAGGCATGAATAGAATTCTAGGGGCCAAGCAGCCACCTCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | ACACATTATTCTAACTACCACAACTTCAGCTTCACATaGGCGCTTCTCAAGACATTTCTTCCCTCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: THYSNYHNFSFT*ALLKTFLPSTL Trigger: GAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGCTGAAGTTGTGGTAGTTAGAATAATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | GCTGACCTCCTTGTTGCCATTCATGTTGCCTCCTTGTaGCAAATTCATGAGTGTTCCATACTTTTCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLLVAIHVASL*QIHECSILFNS Trigger: ACTGTTGAAAAGTATGGAACACTCATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | TCCATAACTTATATCATCTTTCCAAATAGTTGGCCTCCCATTTCTCTGGACTTACAATGGCGGTTTGCATaGGTGAATCTGCTTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SITYIIFPNSWPPISLDLQWRFA*VNLLRH Trigger: GTGCCTAAGCAGATTCACCCATGCAAACCGCCATTG...TAAGTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGATGATATAAGTTATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | TATGCTGACCTCCTTGTTGCCATTCATGTTGCCTCCTaGTTGCAAATTCATGAGTGTTCCATACTTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YADLLVAIHVAS*LQIHECSILFN Trigger: GTTGAAAAGTATGGAACACTCATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CCA 90 bp | TCCATAACTTATATCATCTTTCCAAATAGTTGGCCTCCCATTTCTCTGGACTTAGTAGTCACACAGGTATaGCCTCTCACCTGTATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SITYIIFPNSWPPISLDLVVTQV*PLTCMS Trigger: ACTCATACAGGTGAGAGGCCATACCTGTGTGACTAC...TAAGTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGATGATATAAGTTATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | AAAGGCACTGAGGAGCCCATCTTTCCTCCCATTACTTaGAAGTCTCCAATTAAGGAGTCTATAAATCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGTEEPIFPPIT*KSPIKESINHY Trigger: ATAGTGATTTATAGACTCCTTAATTGGAGACTTCAAAGTAATGGGAGGAAAGATGGGCTCCTCAGTGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | CACTTGCAGCTAAAACTATCTCAGAAGCCCGCATATTaGAGTAGCCAATATTTACTCAAGTGTTTAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQLKLSQKPAY*SSQYLLKCLTD Trigger: GTCAGTTAAACACTTGAGTAAATATTGGCTACTCAAATATGCGGGCTTCTGAGATAGTTTTAGCTGCAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | TATTCTCAGAGAAAGATTTTTATGCTGACCTCCTTGTaGCCATTCATGTTGCCTCCTTGTTGCAAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YSQRKIFMLTSL*PFMLPPCCKFM Trigger: CATGAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATAAAAATCTTTCTCTGAGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| 3UTR CAA 72 bp | AAATATTCTCAGAGAAAGATTTTTATGCTGACCTCCTaGTTGCCATTCATGTTGCCTCCTTGTTGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KYSQRKIFMLTS*LPFMLPPCCKF Trigger: GAATTTGCAACAAGGAGGCAACATGAATGGCAACAAGGAGGTCAGCATAAAAATCTTTCTCTGAGAATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| 3UTR CAA 72 bp | CCTTACTTTTTGAAGGCCTTAAATCTTATCTGCGAATaGACTAATTGCATTTTTCAATTGGACTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PYFLKALNLICE*TNCIFQLDCCP Trigger: AGGACAGCAGTCCAATTGAAAAATGCAATTAGTCAATTCGCAGATAAGATTTAAGGCCTTCAAAAAGTAAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| 3UTR CAA 72 bp | AATGTCCACTCACTGTGTCTAAAATGCTTATTTAAATaGTCATCATGTACACAGTGCCAATATAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVHSLCLKCLFK*SSCTQCQYKAL Trigger: CAAGGCTTTATATTGGCACTGTGTACATGATGACAATTTAAATAAGCATTTTAGACACAGTGAGTGGACATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS GCA 90 bp | GGTGCCCCTGTCAGATTGGCCAGCTCAATGAGTGCCAGGGCCCCATaGAGCCTCTCTCGTTGCTCTTGCAGCCGGCGCTGGGCGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GAPVRLASSMSARAP*SLSRCSCSRRWAPL Trigger: GAGTGGCGCCCAGCGCCGGCTGCAAGAGCAACGAGAGAGGCTGCATGGGGCCCTGGCACTCATTGAGCTGGCCAATCTGACAGGGGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS TCA 90 bp | CCAGCCACTCAGCAGCAGCCTTGTTGTCCGGAGACTGGTGTTTGCTaGGTGCGTCCGTTGGCTCTTCTCTCTTCAGCCGGGCATAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PATQQQPCCPETGVC*VRPLALLSSAGHKG Trigger: ACCCTTATGCCCGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CCA 90 bp | CAGTACTTTGCCAGCCACTCAGCAGCAGCCTTGTTGTCCGGAGACTaGTGTTTGCTGAGTGCGTCCGTTGGCTCTTCTCTCTTCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QYFASHSAAALLSGD*CLLSASVGSSLFSR Trigger: CCGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTGGCTGGCAAAGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS GCA 90 bp | ACTCCAGAGGGTCTTGCTGCTCCTGATCAGCCTTCTGAACTAGCTTaGCTTTTAGGGTGGGGGTGCGTTGCTCTCTCATCTCCCAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: TPEGLAAPDQPSELA*LLGWGCVALSSPST Trigger: AGTACTGGGAGATGAGAGAGCAACGCACCCCCACCCTAAAAGGCAAGCTAGTTCAGAAGGCTGATCAGGAGCAGCAAGACCCTCTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | CTCTGTGAGTTTCAGGGCAGCCTACTCTACATAGCAAGTTCCAGAACTGCCAGGGGGCATAAGGGTGCTTaGGACAATGGCGGTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCEFQGSLLYIASSRTARGHKGA*DNGGLH Trigger: ATGCAAACCGCCATTGTCCAAAGCACCCTTATGCCC...CCTGGCAGTTCTGGAACTTGCTATGTAGAGTAGGCTGCCCTGAAACTCACAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS TCA 90 bp | TCAGCCGGGCATAAGGGTGCTTTGGACAATGGCGGTTTGCATGGGTaGATCTGCTTAGGCACCCGTTTTCTGAACAGACAAAAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAGHKGALDNGGLHG*ICLGTRFLNRQKAS Trigger: AGAAGCCTTTTGTCTGTTCAGAAAACGGGTGCCTAAGCAGATTCACCCATGCAAACCGCCATTGTCCAAAGCACCCTTATGCCCGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS-3UTR CAA 90 bp | TCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAATTAAGGATCGTCGGATTCCATCCTaGAGGTGGCCGCTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVTHRSQALMTTLQEIKDRRIPS*RWPLSG Trigger: CCCAGACAGCGGCCACCTCAAGGATGGAATCCGACG...ATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CAA 90 bp | TCCATAACTTATATCATCTTTCCAAATAGTTGGCCTCCCATTTCTCTGGACTTACCTCTCTCGTTGCTCTaGCAGCCGGCGCTGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SITYIIFPNSWPPISLDLPLSLL*QPALGA Trigger: GGCGCCCAGCGCCGGCTGCAAGAGCAACGAGAGAGG...TAAGTCCAGAGAAATGGGAGGCCAACTATTTGGAAAGATGATATAAGTTATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | CCCACAACTTGTAGCTTCTACCCTGTAACTGCAATCCATATTTACAAAATAGTTCGTCGGATTCCATCCTaGAGGTGGCCGCTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTCSFYPVTAIHIYKIVRRIPS*RWPLSG Trigger: CCCAGACAGCGGCCACCTCAAGGATGGAATCCGACG...AACTATTTTGTAAATATGGATTGCAGTTACAGGGTAGAAGCTACAAGTTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | GCAAATAAGGTGCTTAGCTTATGCCCAAGGATCTACTTTGTAAGTATGCTGGGCTCCGGTATGAAGACGTaGGTGGGTTTTGAGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ANKVLSLCPRIYFVSMLGSGMKT*VGFELS Trigger: GGACAGCTCAAAACCCACCAACGTCTTCATACCGGA...GCCCAGCATACTTACAAAGTAGATCCTTGGGCATAAGCTAAGCACCTTATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | CAATCTCATTACAGGGCCCATAATAGATCTCACTGGTGTACACATACATGCACCGGGCATAAGGGTGCTTaGGACAATGGCGGTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QSHYRAHNRSHWCTHTCTGHKGA*DNGGLH Trigger: ATGCAAACCGCCATTGTCCAAAGCACCCTTATGCCC...GGTGCATGTATGTGTACACCAGTGAGATCTATTATGGGCCCTGTAATGAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | CCCACAACTTGTAGCTTCTACCCTGTAACTGCAATCCATATTTACAAAATAGTTATGCAGCCTCTCTCGTaGCTCTTGCAGCCGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTTCSFYPVTAIHIYKIVMQPLS*LLQPAL Trigger: CAGCGCCGGCTGCAAGAGCAACGAGAGAGGCTGCAT...AACTATTTTGTAAATATGGATTGCAGTTACAGGGTAGAAGCTACAAGTTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAATTAAGGATTCCGGTATGAAGACGTaGGTGGGTTTTGAGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVTHRSQALMTTLQEIKDSGMKT*VGFELS Trigger: GGACAGCTCAAAACCCACCAACGTCTTCATACCGGA...ATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTTCCAATGAATGCATTAAACTTGCAAAACCTAGCTTCCCACAACTTGTAGTACTCCAGAGGGTCTaGCTGCTCCTGATCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TASNECIKLAKPSFPQLVVLQRV*LLLISL Trigger: AAGGCTGATCAGGAGCAGCAAGACCCTCTGGAGTAC...TACAAGTTGTGGGAAGCTAGGTTTTGCAAGTTTAATGCATTCATTGGAAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS GCA 90 bp | GGAAATACCCTGTTACAGATGTTACAGCGAATCCTGCTAGATGAATaGTCTCCTTCATTTATTAAATCCCGAACAGTGTCTGCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNTLLQMLQRILLDE*SPSFIKSRTVSALG Trigger: GCCCAGAGCAGACACTGTTCGGGATTTAATAAATGAAGGAGAGCATTCATCTAGCAGGATTCGCTGTAACATCTGTAACAGGGTATTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTGCAAGATTAGGAGTGATTTCTCCCTaGGAAATACCCTGTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVYTYMHQLPGYIDFARLGVISP*EIPCYR Trigger: TCTGTAACAGGGTATTTCCAAGGGAGAAATCACTCC...TAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTCACACACAGATCCCAAGCACTCATGACAACTCTACAGGAAATTAAGGATGGAGTGATTTCTCCCTaGGAAATACCCTGTTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVTHRSQALMTTLQEIKDGVISP*EIPCYR Trigger: TCTGTAACAGGGTATTTCCAAGGGAGAAATCACTCC...ATCCTTAATTTCCTGTAGAGTTGTCATGAGTGCTTGGGATCTGTGTGTGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117241.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGTACACATACATGCACCAGTTGCCAGGTTACATAGACTTTGCAAGATTATTTGAGCTGTCCACTTaGAACAAAGGCTTTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVYTYMHQLPGYIDFARLFELST*NKGFST Trigger: TGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAAA...TAATCTTGCAAAGTCTATGTAACCTGGCAACTGGTGCATGTATGTGTACACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS TCA 72 bp | TCCCCGCCCGACACGGCGGCCACGGAGGCGGAGGACTaGGGCGCACCCCGCAGCGTCGGGAGTTCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPPDTAATEAED*GAPRSVGSSAA Trigger: GGCGGCTGAACTCCCGACGCTGCGGGGTGCGCCTCAGTCCTCCGCCTCCGTGGCCGCCGTGTCGGGCGGGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS TCA 72 bp | GTCCGGCTGAAACGACGCCGCCCGCCGCCCCCGGGCTaGGCGTCACGTTATGCGCGTTCTCACCCCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRLKRRRPPPPG*ASRYARSHPSA Trigger: GGCGCTGGGGTGAGAACGCGCATAACGTGACGCTCAGCCCGGGGGCGGCGGGCGGCGTCGTTTCAGCCGGAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS GCA 72 bp | CGGCTCGGGCTCCCCCACGCTGCTGCACGGAGGCGTTaGCGGCGTGGTCCTGATGACCGATACCAGTACGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLGLPHAAARRR*RRGPDDRYQYA Trigger: CGCGTACTGGTATCGGTCATCAGGACCACGCCGGCAACGCCTCCGTGCAGCAGCGTGGGGGAGCCCGAGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CCA 72 bp | CTGATGACCGATACCAGTACGCGCTTCGGGGAGTCGTaGCAGAAGACGACCGGCGGCGGCTCCGCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LMTDTSTRFGES*QKTTGGGSAMG Trigger: ACCCATGGCGGAGCCGCCGCCGGTCGTCTTCTGCCACGACTCCCCGAAGCGCGTACTGGTATCGGTCATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS GCA 72 bp | GAGTGGTGCCCCTGTCAGATTGGCCAGCTCAATGAGTaGCAGGGCCCCATGCAGCCTCTCTCGTTGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EWCPCQIGQLNE*QGPMQPLSLLL Trigger: CAAGAGCAACGAGAGAGGCTGCATGGGGCCCTGGCACTCATTGAGCTGGCCAATCTGACAGGGGCACCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS CCA 72 bp | CCATGCAGCCTCTCTCGTTGCTCTTGCAGCCGGCGCTaGGCGCCACTCTTCTCATCGTCTTCCTCATCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PCSLSRCSCSRR*APLFSSSSSSD Trigger: GTCTGATGAGGAAGACGATGAGAAGAGTGGCGCCCAGCGCCGGCTGCAAGAGCAACGAGAGAGGCTGCATGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS TCA 72 bp | CAGCAGCAGCCTTGTTGTCCGGAGACTGGTGTTTGCTaGGTGCGTCCGTTGGCTCTTCTCTCTTCAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QQQPCCPETGVC*VRPLALLSSAG Trigger: CCCGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CCA 72 bp | GCCAGCCACTCAGCAGCAGCCTTGTTGTCCGGAGACTaGTGTTTGCTGAGTGCGTCCGTTGGCTCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASHSAAALLSGD*CLLSASVGSSL Trigger: GAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS GCA 72 bp | AGCAGCCTTGTTGTCCGGAGACTGGTGTTTGCTGAGTaGGTCCGTTGGCTCTTCTCTCTTCAGCCGGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: SSLVVRRLVFAE*VRWLFSLQPGI Trigger: TATGCCCGGCTGAAGAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CAA 72 bp | CACTCAGCAGCAGCCTTGTTGTCCGGAGACTGGTGTTaGCTGAGTGCGTCCGTTGGCTCTTCTCTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HSAAALLSGDWC*LSASVGSSLFS Trigger: GCTGAAGAGAGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CAA 72 bp | TCCCAGTACTTTGCCAGCCACTCAGCAGCAGCCTTGTaGTCCGGAGACTGGTGTTTGCTGAGTGCGTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SQYFASHSAAAL*SGDWCLLSASV Trigger: AACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTGGCTGGCAAAGTACTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS CAA 90 bp | TCTCTCATCTCCCAGTACTTTGCCAGCCACTCAGCAGCAGCCTTGTaGTCCGGAGACTGGTGTTTGCTGAGTGCGTCCGTTGGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLISQYFASHSAAAL*SGDWCLLSASVGSS Trigger: AGAAGAGCCAACGGACGCACTCAGCAAACACCAGTCTCCGGACAACAAGGCTGCTGCTGAGTGGCTGGCAAAGTACTGGGAGATGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS GCA 72 bp | GGTCTTGCTGCTCCTGATCAGCCTTCTGAACTAGCTTaGCTTTTAGGGTGGGGGTGCGTTGCTCTCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GLAAPDQPSELA*LLGWGCVALSS Trigger: AGATGAGAGAGCAACGCACCCCCACCCTAAAAGGCAAGCTAGTTCAGAAGGCTGATCAGGAGCAGCAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS CCA 72 bp | CCTGATCAGCCTTCTGAACTAGCTTGCCTTTTAGGGTaGGGGTGCGTTGCTCTCTCATCTCCCAGTACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDQPSELACLLG*GCVALSSPSTL Trigger: CAAAGTACTGGGAGATGAGAGAGCAACGCACCCCCACCCTAAAAGGCAAGCTAGTTCAGAAGGCTGATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059817.12 |
||
| CDS CAA 90 bp | CTTCTCTCCGGTATGAAGACGTTGGTGGGTTTTGAGCTGTCCACTTaGAACAAAGGCTTTTCCACAGTCTGGGTAGTCACACAGGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSGMKTLVGFELST*NKGFSTVWVVTQVW Trigger: CCATACCTGTGTGACTACCCAGACTGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAAAACCCACCAACGTCTTCATACCGGAGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS TCA 72 bp | CATAAGGGTGCTTTGGACAATGGCGGTTTGCATGGGTaGATCTGCTTAGGCACCCGTTTTCTGAACAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: HKGALDNGGLHG*ICLGTRFLNRQ Trigger: TTGTCTGTTCAGAAAACGGGTGCCTAAGCAGATTCACCCATGCAAACCGCCATTGTCCAAAGCACCCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CAA 72 bp | GGTATGAAGACGTTGGTGGGTTTTGAGCTGTCCACTTaGAACAAAGGCTTTTCCACAGTCTGGGTAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GMKTLVGFELST*NKGFSTVWVVT Trigger: TGTGACTACCCAGACTGTGGAAAAGCCTTTGTTCAAAGTGGACAGCTCAAAACCCACCAACGTCTTCATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS CAA 72 bp | TATGAGTCCTTTTGTGAGCCTGGAGTGATTTCTCCCTaGGAAATACCCTGTTACAGATGTTACAGCGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: YESFCEPGVISP*EIPCYRCYSES Trigger: GGATTCGCTGTAACATCTGTAACAGGGTATTTCCAAGGGAGAAATCACTCCAGGCTCACAAAAGGACTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
||
| CDS GCA 72 bp | CTGTTACAGATGTTACAGCGAATCCTGCTAGATGAATaGTCTCCTTCATTTATTAAATCCCGAACAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQMLQRILLDE*SPSFIKSRTVS Trigger: AGACACTGTTCGGGATTTAATAAATGAAGGAGAGCATTCATCTAGCAGGATTCGCTGTAACATCTGTAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059817.12 ENSMUST00000117241.2 |
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