RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP362 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028799

Ensembl transcript IDs: ENSMUST00000071108.14, ENSMUST00000106072.9, ENSMUST00000170934.3

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCCAGGTCTCACCTGGCACGCCCCCAACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCACCCTTTGGTCCCGCGGGTCTCCAG +
Preference number: 1 (lower is better)
Translates to: GARSHLARPQPIPWA*HPAVTAPFGPAGLQ
Trigger: CTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCCAGGTGAGACCTGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp AGGGGAGGAGCCAGGTCTCACCTGGCACGCCCCCAACCCATTCCCTaGGCTTGCCACCCAGCCGTCACTGCACCCTTTGGTCCCGCGGGT +
Preference number: 1 (lower is better)
Translates to: RGGARSHLARPQPIP*ACHPAVTAPFGPAG
Trigger: ACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCCAGGTGAGACCTGGCTCCTCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp GTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTGTCTGCCAAGTGGGCGGGGCGTCGC +
Preference number: 1 (lower is better)
Translates to: VRELGGSWRPQRELG*VLPGSVSAKWAGRR
Trigger: GCGACGCCCCGCCCACTTGGCAGACACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 90 bp GGCACGCCCCCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTaGACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGT +
Preference number: 1 (lower is better)
Translates to: GTPPTHSLGLPPSRH*TLWSRGSPDLSHFR
Trigger: ACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp TCCTTTGGAGGCTCCTATCCCTGCCGCAGGGCCTGGGGTCTGGGTTaGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGC +
Preference number: 1 (lower is better)
Translates to: SFGGSYPCRRAWGLG*GVLICVEKDNPSLG
Trigger: GCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCAGACCCCAGGCCCTGCGGCAGGGATAGGAGCCTCCAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 90 bp CTGGAAAGGGCACTTAGTCCCAGGCCCCCTCCCTCTCCATCCCCCTaGCCACAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCT +
Preference number: 1 (lower is better)
Translates to: LERALSPRPPPSPSP*PQSGVVGEVADRFP
Trigger: AGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTGTGGGCAGGGGGATGGAGAGGGAGGGGGCCTGGGACTAAGTGCCCTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp CCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAG +
Preference number: 1 (lower is better)
Translates to: PTHSLGLPPSRHCTL*SRGSPDLSHFRALK
Trigger: CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp AGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGG +
Preference number: 1 (lower is better)
Translates to: SQPGRASVDQAFWQV*KVVRELGGSWRPQR
Trigger: CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp GTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCCAGGCAGGCCTaGCAGCTGCTGTGCCCTCTGCTCACGAAGGCTAGGGCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: VSRPLSFPCPKARQA*QLLCPLLTKARAKL
Trigger: GAGCTTTGCCCTAGCCTTCGTGAGCAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTTAGGGCACGGAAATGAGAGAGGTCTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR TCA 90 bp CTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTaGCGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTCTCCTCCCAC +
Preference number: 1 (lower is better)
Translates to: LCSRRLGQSSGSLTG*RVKGSLQLSPVSSH
Trigger: GTGGGAGGAGACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp GCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTG +
Preference number: 1 (lower is better)
Translates to: AFWQVWKVVRELGGS*RPQRELGWVLPGSV
Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp GGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: GPSFLAGLEGCERAW*FLEAPAGIRLGAAW
Trigger: CCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp TGCCCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTaGGTGACGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTCTCCTC +
Preference number: 1 (lower is better)
Translates to: CPLLTKARAKLRQFD*VTGEGLTPAVSCLL
Trigger: GAGGAGACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 90 bp TGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCC +
Preference number: 1 (lower is better)
Translates to: CGPSFLAGLEGCERA*WFLEAPAGIRLGAA
Trigger: GGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 90 bp AAAACCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATaGCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: KTQQTGSKCSEIVFG*HQNSPESCSWPGCQ
Trigger: CTGGCAGCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGCCTGGGTCTGTGTCTaGCAAGTGGGCGGGGCGTCG +
Preference number: 2 (lower is better)
Translates to: WQVWKVVRELGGSWRPQRAWVCV*QVGGAS
Trigger: CGACGCCCCGCCCACTTGGCAGACACAGACCCAGGC...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 90 bp CCCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTaGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: PNPFPGLATQPSLHP*VPRVSRPLSFPCPK
Trigger: TTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 90 bp GAGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: EPAREGFCGPSFLAG*EGCERAWWFLEAPA
Trigger: CGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGAGGCTGGGTGCTGCCTaGGTCTGTGTCTGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: WQVWKVVRELGGSWRPQRRLGAA*VCVCQV
Trigger: CACTTGGCAGACACAGACCCAGGCAGCACCCAGCCT...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGCERAW*FLEAPA
Trigger: CGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACA...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGCGAGGTAGACTGGGGTaGTCTTCAGGGCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWRGRLG*SSGQQG
Trigger: CCCCTGCTGCCCTGAAGACCACCCCAGTCTACCTCG...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGCACCGAGGTAGACTaGGGTGGTCTTCAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: WVGESSSVSRRTTPPWALSTEVD*GGLQGS
Trigger: GCTGCCCTGAAGACCACCCCAGTCTACCTCGGTGCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTCCAGAATCTTGCAGTTaGCCTGGCTGCCAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGPESCS*PGCQEP
Trigger: TGGCTCCTGGCAGCCAGGCCAACTGCAAGATTCTGG...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 90 bp CCTTTGACGTCCAGAACCCCAGGCCTCCCCTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCCG +
Preference number: 2 (lower is better)
Translates to: PLTSRTPGLPSRPEV*AREVPTLPSGSLYP
Trigger: CGGATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGGCCTGGGGTTCTGGACGTCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCA +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRPIPWA*HPAVTA
Trigger: TGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCA +
Preference number: 2 (lower is better)
Translates to: GQPLPGHCTLLEEILERAPIPWA*HPAVTA
Trigger: TGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGG...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACCCTCTCCATCCCCCTaGCCACAGTCTGGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRPSPSP*PQSGVV
Trigger: CACCACTCCAGACTGTGGGCAGGGGGATGGAGAGGG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCCAGAATCTTGCAGTTaGCCTGGCTGCCAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKPESCS*PGCQEP
Trigger: TGGCTCCTGGCAGCCAGGCCAACTGCAAGATTCTGG...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGRFGRL*ESLVVP
Trigger: AGGAACCACCAAGCTCTCTCACAACCTTCCAAACCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCACCTCTCTCATTTCCGTaGCCTAAAGCCAGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GQPLPGHCTLLEEILERAPLSFP*PKARQA
Trigger: GGCCTGCCTGGCTTTAGGGCACGGAAATGAGAGAGG...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRGCERA*WFLEAP
Trigger: TGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACAGGGAGGGCTTCTGTaGACCAAGCTTTCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRQGGLL*TKLSGR
Trigger: CCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCTGTCTCCTCCCACCTaGGGGAGGGTGTCCCCTTTG +
Preference number: 2 (lower is better)
Translates to: CGRGLLWVLYIVPIYTDTLSPPT*GRVSPL
Trigger: CAAAGGGGACACCCTCCCTCAGGTGGGAGGAGACAG...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGCCTGGGTCTGTGTCTaGCAAGTGGGCGGGGCGTCG +
Preference number: 2 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRAWVCV*QVGGAS
Trigger: CGACGCCCCGCCCACTTGGCAGACACAGACCCAGGC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCACCCAGCCGTCACTaGACCCTTTGGTCCCGCGGG +
Preference number: 2 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGPPSRH*TLWSRG
Trigger: CCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: ALRSSLDATRTVQNLAVGQRELG*VLPGSV
Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTG...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGAAAGCCAGGCAGGCCTaGCAGCTGCTGTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: CGRGLLWVLYIVPIYTDTKARQA*QLLCPL
Trigger: CAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTT...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: CGRGLLWVLYIVPIYTDTRHCTL*SRGSPD
Trigger: GTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACG...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR GCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGCAGACAGGTTCAAAGTaGTCTGAGATCGTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: WVGESSSVSRRTTPPWALQTGSK*SEIVFG
Trigger: TCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTG...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACAAGACCTGAGGTTTTaGCCAGAGAAGTTCCCACGC +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRQDLRF*PEKFPR
Trigger: GCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGGCAGGGTCTGCTCCTaGGTCCTCCTTTGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKGRVCS*VLLWRL
Trigger: GAGCCTCCAAAGGAGGACCCAGGAGCAGACCCTGCC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRRFGRL*ESLVVP
Trigger: AGGAACCACCAAGCTCTCTCACAACCTTCCAAACCT...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCGTGGACCAAGCTTTCTaGCAGGTTTGGAAGGTTGTG +
Preference number: 2 (lower is better)
Translates to: DLRFWPEKFPRCPLVLCIVDQAF*QVWKVV
Trigger: CACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCAC...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCCCTGCCCACAGTCTaGAGTGGTGGGAGAGGTAGC +
Preference number: 2 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGPLPTV*SGGRGS
Trigger: GCTACCTCTCCCACCACTCCAGACTGTGGGCAGGGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGACAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRQRELG*VLPGSV
Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTG...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTA +
Preference number: 2 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFELGGS*RPQREL
Trigger: TAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTCAGGGAGGGCTTCTGTaGACCAAGCTTTCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFQGGLL*TKLSGR
Trigger: CCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTG...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAATCTTGCAGTTGGCCTaGCTGCCAGGAGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRILQLA*LPGASQ
Trigger: CTGGCTGGCTCCTGGCAGCCAGGCCAACTGCAAGAT...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGTTTCTTCTCTGGGGGTaGTGTGGAAGGGGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKFLLWG*CGRGLL
Trigger: GAGAAGCCCCCTTCCACATCACCCCCAGAGAAGAAA...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PLVLCIRLSSPFNFPFLAGCERA*WFLEAP
Trigger: TGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACC...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCTCCCCTCAAGACCTaGGGTTTTGGCCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGPPLKT*GFGQRS
Trigger: ACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGTCCCACGCTGCCCTCTaGTTCTCTGTATCCGTCTGT +
Preference number: 2 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGSHAAL*FSVSVC
Trigger: ACAGACGGATACAGAGAACCAGAGGGCAGCGTGGGA...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CCA 90 bp CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTT +
Preference number: 2 (lower is better)
Translates to: PNRQVQSALRSSLDATRTAFWQV*KVVREL
Trigger: AAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGC...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 90 bp AAAAGAAAACCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: KRKPNRQVQSALRSS*DATRTVQNLAVGLA
Trigger: AGCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR TCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAAGGTTCAAAGTGCTCTaGGATCGTCTTTGGATGCCA +
Preference number: 2 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRRFKVL*DRLWMP
Trigger: TGGCATCCAAAGACGATCTCAGAGCACTTTGAACCT...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp CTTGGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTGTCTGCCAAGTGGGCG +
Preference number: 3 (lower is better)
Translates to: LGGSWRPQRELG*VLPGSVSAKWA
Trigger: CGCCCACTTGGCAGACACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp TCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGT +
Preference number: 3 (lower is better)
Translates to: SLGLPPSRHCTL*SRGSPDLSHFR
Trigger: ACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 72 bp CATTTCCGTGCCCTAAAGCCAGGCAGGCCTGGCAGCTaGTGTGCCCTCTGCTCACGAAGGCTAGGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: HFRALKPGRPGS*CALCSRRLGQS
Trigger: GCTTTGCCCTAGCCTTCGTGAGCAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTTAGGGCACGGAAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp TTGGAGGCTCCTATCCCTGCCGCAGGGCCTGGGGTCTaGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACA +
Preference number: 3 (lower is better)
Translates to: LEAPIPAAGPGV*VGESSSVSRRT
Trigger: TGTCCTTCTCGACACAGATGAGGACTCCCCAACCCAGACCCCAGGCCCTGCGGCAGGGATAGGAGCCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR TCA 72 bp CTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: LWTKLSGRFGRL*ESLVVPGGPSG
Trigger: CCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR TCA 72 bp CGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTaGCGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: RRLGQSSGSLTG*RVKGSLQLSPV
Trigger: GACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp CAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: QVWKVVRELGGS*RPQRELGWVLP
Trigger: AGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp CTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTaGGTGACGGGTGAAGGGCTCACTCCAGCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: LTKARAKLRQFD*VTGEGLTPAVS
Trigger: GGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp CCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTaGAAAGGGCACTTAGTCCCAGGCCCCCTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: PSLGTVPFWKKF*KGHLVPGPLPL
Trigger: GAGAGGGAGGGGGCCTGGGACTAAGTGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTC +
Preference number: 3 (lower is better)
Translates to: WVGESSSVSRRTTPPWALALRSS*DATRTV
Trigger: GACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCGAACAGTCCAGAATCTaGCAGTTGGCCTGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PQDLRFWPEKFPRCPLVLEQSRI*QLAWLP
Trigger: TGGCAGCCAGGCCAACTGCAAGATTCTGGACTGTTC...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACG +
Preference number: 3 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGSRPEV*AREVPT
Trigger: CGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp TTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: FLAGLEGCERAW*FLEAPAGIRLG
Trigger: ACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: GRASVDQAFWQV*KVVRELGGSWR
Trigger: CCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp AGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTaGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGT +
Preference number: 3 (lower is better)
Translates to: SQPGRASVDQAF*QVWKVVRELGG
Trigger: ACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGACCCATTCCCTGGGCTaGCCACCCAGCCGTCACTGC +
Preference number: 3 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGTHSLG*PPSRHC
Trigger: GCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGT...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCCTGGGGTCTGGGTaGGGGAGTCCTCATCTGTGT +
Preference number: 3 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFGLGSG*GSPHLC
Trigger: ACACAGATGAGGACTCCCCAACCCAGACCCCAGGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRSFLAG*EGCERA
Trigger: AGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCT...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CCA 72 bp GAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTaGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: ESSSVSRRTTPP*ALYPSGRNSGK
Trigger: CTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 72 bp CAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATaGCACCAGAACAGTCCAGAATCTTGCAGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: QTGSKCSEIVFG*HQNSPESCSWP
Trigger: AGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR-3UTR CAA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGSFLAG*EGCERA
Trigger: AGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCT...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR TCA 72 bp CAAAAAGAAAACCCAACAGACAGGTTCAAAGTGCTCTaGGATCGTCTTTGGATGCCACCAGAACAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: QKENPTDRFKVL*DRLWMPPEQSR
Trigger: TCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR GCA 72 bp GGGAACAAAAAGAAAACCCAACAGACAGGTTCAAAGTaGTCTGAGATCGTCTTTGGATGCCACCAGAACAGT +
Preference number: 3 (lower is better)
Translates to: GNKKKTQQTGSK*SEIVFGCHQNS
Trigger: ACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTTTGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGRPRVQ*HVGLRH
Trigger: GTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCG...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALVAGLA*SATSGC
Trigger: GCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTGAGGCCCGCCCGCACATaGTGCAGCAGTAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGSWRPQRELGWVLPGSVRPART*CSSRPW
Trigger: CCAAGGCCTACTGCTGCAGCATGTGCGGGCGGGCCT...CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGCTTGGGCAGCGACATaGCCGCCTGGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALAWAAT*PPGCSR
Trigger: CCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PQDLRFWPEKFPRCPLVLRPRVQ*HVGLRH
Trigger: GTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCG...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKSDMTA*LLSAGA
Trigger: CGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGGCGGCTCTGGCTGGTaGTGGTGGGTGTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWGGSGW*WWVWTG
Trigger: CCCCGTCCACACCCACCACCACCAGCCAGAGCCGCC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 72 bp TTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTaGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: FPGLATQPSLHP*VPRVSRPLSFP
Trigger: CGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGCTTGGGCAGCGACATaGCCGCCTGGCTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWAWAAT*PPGCSR
Trigger: CCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATG +
Preference number: 4 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGSPGTC*SLGSDM
Trigger: CATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGCCCGCCCGCACATGCTaGAGCAGTAGGCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALPARTC*SSRPWR
Trigger: ACGCCAAGGCCTACTGCTGCAGCATGTGCGGGCGGG...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGAGGCCCGCCCGCACATaGTGCAGCAGTAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WQVWKVVRELGGSWRPQRRPART*CSSRPW
Trigger: CCAAGGCCTACTGCTGCAGCATGTGCGGGCGGGCCT...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTCCAGCTGGCTCGGCATaGTGGGAGGAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGPAGSA*WEEGAR
Trigger: TCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGG...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGCCAGCTGGCTCGGCATaGTGGGAGGAGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWPAGSA*WEEGAR
Trigger: TCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGG...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTGCTGGGTTCTCTGCCTTaGTCTTTTTCCGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: GGSWRPQRELGWVLPGSVLGSLP*SFSGRV
Trigger: AACGCGGCCGGAAAAAGATCAAGGCAGAGAACCCAG...CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGAGGGAGGCGGAGTCTaGGTAGGCCCGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALEGGGV*VGPVAV
Trigger: AACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGCTGGCTCGGCATGGTaGGAGGAGGGGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGAGSAW*EEGARS
Trigger: ACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGGCTCTGGCTGGTGGTaGTGGGTGTGGACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWGSGWW*WVWTGY
Trigger: GTACCCCGTCCACACCCACCACCACCAGCCAGAGCC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGCAGTGGTAGGGCTTaGCACCCAGGTGGATGCGCA +
Preference number: 4 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGSSGRA*HPGGCA
Trigger: TGCGCATCCACCTGGGTGTCAAGCCCTACCACTGCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGGCCTTGGCGTGCTTaGTGGCATGGGCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALRPWRA*WHGQRG
Trigger: ACCTCTCTGCCCATGCCATCAAGCACGCCAAGGCCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALCLALL*GLTGGQ
Trigger: CTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGATTCGCACCGGGATaGCGGGGGACTCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKRFAPG*RGTRSS
Trigger: AGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGA +
Preference number: 4 (lower is better)
Translates to: WQVWKVVRELGGSWRPQRHRRPG*GTGQQG
Trigger: TCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTG...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTGCAGAGAGGTGGATCTaGAGGGAGGCGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGAERWI*REAESE
Trigger: CTCAGACTCCGCCTCCCTCCAGATCCACCTCTCTGC...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGGAGGTGGGTGGCAGGTaGGGTGGCCGGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKEVGGR*GGRIFS
Trigger: TGAAAAGATCCGGCCACCTCACCTGCCACCCACCTC...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGGCCCTGGATTGTCTTaGTGGAGTCCAGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGGPGLS*WSPGVG
Trigger: CCCCACTCCTGGACTCCATCAAGACAATCCAGGGCC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGCAGTGGTAGGGCTTaGCACCCAGGTGGATGCGCA +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKSSGRA*HPGGCA
Trigger: TGCGCATCCACCTGGGTGTCAAGCCCTACCACTGCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGCSPGT*CSLGSD
Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGCTCTGGCTGGTGGTaGTGGGTGTGGACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRGSGWW*WVWTGY
Trigger: GTACCCCGTCCACACCCACCACCACCAGCCAGAGCC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGGCGATGAGGCGGCTCTaGCTGGTGGTGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GRASVDQAFWQVWKVVREAMRRL*LVVVGV
Trigger: CACACCCACCACCACCAGCCAGAGCCGCCTCATCGC...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 72 bp TCCAGAACCCCAGGCCTCCCCTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRTPGLPSRPEV*AREVPTLPSGS
Trigger: AGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGGCCTGGGGTTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCCTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: DLRFWPEKFPRCPLVLCILGPLG*VMAHQV
Trigger: CACCTGGTGAGCCATCACTCACCCCAGAGGACCGAG...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGACTAGCAGTGGCTGCTaGGATGAGGCTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWTSSGC*DEAEVG
Trigger: ACCCACCTCAGCCTCATCGCAGCAGCCACTGCTAGT...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFVAGLA*SATSGC
Trigger: GCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGAGATTCGCACCGGGATaGCGGGGGACTCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRASVDQAFWQVWKVVRERFAPG*RGTRSS
Trigger: AGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCT...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGGACAGGGGGACCCCCTaGGTTCTCTGCCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKDRGTP*VLCLDL
Trigger: AAGATCAAGGCAGAGAACCCAGGGGGTCCCCCTGTC...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGTATGTTGCTGGAGGTaGGAGAGCTGCCGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWVCCWR*ESCRKD
Trigger: GTCCTTCCGGCAGCTCTCCCACCTCCAGCAACATAC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGTATGTTGCTGGAGGTaGGAGAGCTGCCGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGVCCWR*ESCRKD
Trigger: GTCCTTCCGGCAGCTCTCCCACCTCCAGCAACATAC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCTTGTGCTGGCGCTGGTaGGACTGGAGGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DLRFWPEKFPRCPLVLCILCWRW*DWRLES
Trigger: GCTCTCCAACCTCCAGTCTCACCAGCGCCAGCACAA...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGATGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRCLALL*GLTGGQ
Trigger: CTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACA...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCGGCTCTGGCTGGTaGTGGTGGGTGTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFGGSGW*WWVWTG
Trigger: CCCCGTCCACACCCACCACCACCAGCCAGAGCCGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCGGGCCAAGCAGACCGTaGCCCTGGATTGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PQDLRFWPEKFPRCPLVLGPSRP*PWIVLM
Trigger: CATCAAGACAATCCAGGGCCACGGTCTGCTTGGCCC...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTCGCCTGTGTGGATTCTaGTATGTTGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGRLCGF*YVAGGG
Trigger: CCCACCTCCAGCAACATACCAGAATCCACACAGGCG...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCGCCTGTGTGGATTCTaGTATGTTGCTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKRLCGF*YVAGGG
Trigger: CCCACCTCCAGCAACATACCAGAATCCACACAGGCG...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTGGTCTGTCGCCTGTGTaGATTCTGGTATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSGVVGEVADRFPGQHRGGLSPV*ILVCCW
Trigger: CCAGCAACATACCAGAATCCACACAGGCGACAGACC...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTGGAGGTTGGAGAGCTaGGTGAAAGCCTTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGWRLES*VKAFSQ
Trigger: CTGCGAAAAGGCTTTCACTCAGCTCTCCAACCTCCA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFCSPGT*CSLGSD
Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACAGCTGGCTCGGCATGGTaGGAGGAGGGGGCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PNRQVQSALRSSLDATRTAGSAW*EEGARS
Trigger: ACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGC...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCGCGTGCTTGATGGCATaGGCAGAGAGGTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: DLRFWPEKFPRCPLVLCIACLMA*AERWIW
Trigger: CCAGATCCACCTCTCTGCCCATGCCATCAAGCACGC...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 72 bp AGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: REGFCGPSFLAG*EGCERAWWFLE
Trigger: CTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGGAGGTGGGTGGCAGGTaGGGTGGCCGGATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CGRGLLWVLYIVPIYTDTEVGGR*GGRIFS
Trigger: TGAAAAGATCCGGCCACCTCACCTGCCACCCACCTC...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGAGGGAGGCGGAGTCTaGGTAGGCCCGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFEGGGV*VGPVAV
Trigger: AACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCACTAGCAGTGGCTGCTaGGATGAGGCTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ALRSSLDATRTVQNLAVGTSSGC*DEAEVG
Trigger: ACCCACCTCAGCCTCATCGCAGCAGCCACTGCTAGT...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGTTTTCGCAGCCAGGATaGGGGCACTTGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRASVDQAFWQVWKVVREFSQPG*GHLYGL
Trigger: CAGACCATACAAGTGCCCGCATCCTGGCTGCGAAAA...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCTTTTCGCAGCCAGGATaGGGGCACTTGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: DLRFWPEKFPRCPLVLCIFSQPG*GHLYGL
Trigger: CAGACCATACAAGTGCCCGCATCCTGGCTGCGAAAA...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCCGCCCGCACATGCTaGAGCAGTAGGCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGPARTC*SSRPWR
Trigger: ACGCCAAGGCCTACTGCTGCAGCATGTGCGGGCGGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGCGATGAGGCGGCTCTaGCTGGTGGTGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGAMRRL*LVVVGV
Trigger: CACACCCACCACCACCAGCCAGAGCCGCCTCATCGC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCAGCAGACCGTGGCCCTaGATTGTCTTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGSRPWP*IVLMES
Trigger: GGACTCCATCAAGACAATCCAGGGCCACGGTCTGCT...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACACACCGGAGGCCAGGATaGGGTACGGGACAACAAGGA +
Preference number: 4 (lower is better)
Translates to: PNRQVQSALRSSLDATRTHRRPG*GTGQQG
Trigger: TCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTG...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGGTTCTCTGCCTTaGTCTTTTTCCGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: ALRSSLDATRTVQNLAVGLGSLP*SFSGRV
Trigger: AACGCGGCCGGAAAAAGATCAAGGCAGAGAACCCAG...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRLGPLG*VMAHQV
Trigger: CACCTGGTGAGCCATCACTCACCCCAGAGGACCGAG...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCGGTCTGTCGCCTGTGTaGATTCTGGTATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGGLSPV*ILVCCW
Trigger: CCAGCAACATACCAGAATCCACACAGGCGACAGACC...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCATTGTGCTGGCGCTGGTaGGACTGGAGGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLVLCIRLSSPFNFPFLALCWRW*DWRLES
Trigger: GCTCTCCAACCTCCAGTCTCACCAGCGCCAGCACAA...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAAGGCCTTGGCGTGCTTaGTGGCATGGGCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLVLCIRLSSPFNFPFLARPWRA*WHGQRG
Trigger: ACCTCTCTGCCCATGCCATCAAGCACGCCAAGGCCT...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGVLWGE*WLTRCS
Trigger: GGAACACCTGGTGAGCCATCACTCACCCCAGAGGAC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRVLWGE*WLTRCS
Trigger: GGAACACCTGGTGAGCCATCACTCACCCCAGAGGAC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGACAGGGGGACCCCCTaGGTTCTCTGCCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKDRGTP*VLCLDL
Trigger: AAGATCAAGGCAGAGAACCCAGGGGGTCCCCCTGTC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGCAGAGAGGTGGATCTaGAGGGAGGCGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PPSGKETPGNVKLVNQWRAERWI*REAESE
Trigger: CTCAGACTCCGCCTCCCTCCAGATCCACCTCTCTGC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGGTTGGAGAGCTGAGTaGAAGCCTTTTCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKGWRAE*KPFRSQ
Trigger: CTGGCTGCGAAAAGGCTTTCACTCAGCTCTCCAACC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTTTTCAGCCATCAGCTaGTCTTTGATCTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: WVGESSSVSRRTTPPWALFSAIS*SLILLI
Trigger: GATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTAGCAGACCGTGGCCCTaGATTGTCTTGATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFSRPWP*IVLMES
Trigger: GGACTCCATCAAGACAATCCAGGGCCACGGTCTGCT...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGGGCCAAGCAGACCGTaGCCCTGGATTGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGGPSRP*PWIVLM
Trigger: CATCAAGACAATCCAGGGCCACGGTCTGCTTGGCCC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CCA 90 bp CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAGCGTGCTTGATGGCATaGGCAGAGAGGTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PLVLCIRLSSPFNFPFLAACLMA*AERWIW
Trigger: CCAGATCCACCTCTCTGCCCATGCCATCAAGCACGC...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGGTTGGAGAGCTGAGTaGAAGCCTTTTCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IVPIYTDTHGFRIGICLGGWRAE*KPFRSQ
Trigger: CTGGCTGCGAAAAGGCTTTCACTCAGCTCTCCAACC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR TCA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGTGGAGGTTGGAGAGCTaGGTGAAAGCCTTTTCGCAG +
Preference number: 4 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKWRLES*VKAFSQ
Trigger: CTGCGAAAAGGCTTTCACTCAGCTCTCCAACCTCCA...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR GCA 90 bp GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGTTTTCAGCCATCAGCTaGTCTTTGATCTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: VLICVEKDNPSLGTVPFWFSAIS*SLILLI
Trigger: GATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAA...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
3UTR CAA 72 bp CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTCCAGAATCTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PNRQVQSALRSS*DATRTVQNLAV
Trigger: AACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS GCA 90 bp ACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: TSGCGTDCGCSPGTC*SLGSDMTAWLLSAG
Trigger: GCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 90 bp GCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: ATSGCGTDCGCSPGT*CSLGSDMTAWLLSA
Trigger: CGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 90 bp GGCCTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTaGAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCC +
Preference number: 5 (lower is better)
Translates to: GLACSATSGCGTDCG*SPGTCCSLGSDMTA
Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 90 bp GTGGCCGGCCTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTaGGGGTGCAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATG +
Preference number: 5 (lower is better)
Translates to: VAGLACSATSGCGTD*GCSPGTCCSLGSDM
Trigger: CATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 90 bp AAGCCCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: KPQTCDSTGGRPRVQ*HVGLRHGLRVQPGH
Trigger: GTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGGGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CCA 90 bp TGCAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCGGGAGGGACTAGCAGTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CSPGTCCSLGSDMTA*LLSAGAGGTSSGCC
Trigger: GCAGCAGCCACTGCTAGTCCCTCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 90 bp GAGGAAAGCCCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: EESPRPVTVLVAGLA*SATSGCGTDCGCSP
Trigger: CGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGGGCTTTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CCA 90 bp ACCTGTATGTCTTGCCCTCCTTTGCGGTCTCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGACAGGGGGACCCCCTGGGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: TCMSCPPLRSHRRPG*GTGQQGQGDPLGSL
Trigger: CAGAGAACCCAGGGGGTCCCCCTGTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS TCA 90 bp GAGATTCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCCACCACTGTGTGTTTGGACATGTGC +
Preference number: 5 (lower is better)
Translates to: EIRTGMPGDSVLWGE*WLTRCSTTVCLDMC
Trigger: GCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS TCA 90 bp CAGAGAGATTCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTGGACAT +
Preference number: 5 (lower is better)
Translates to: QRDSHRDAGGLGPLG*VMAHQVFHHCVFGH
Trigger: ATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCC +
Preference number: 5 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGGTCCS*GSDMTA
Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS GCA 90 bp AAAGGTGAGCGGGCAGACCTTACACCTGTATGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAGGATGGGGTACGGGACAACAAGGAC +
Preference number: 5 (lower is better)
Translates to: KGERADLTPVCLALL*GLTGGQDGVRDNKD
Trigger: GTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAAGGTCTGCCCGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CCA 90 bp GGTGGATCTGGAGGGAGGCGGAGTCTGAGTAGGCCCGGTAGCAGTTaGGACATTTGTAGGGCTTGTCCTTATTGTGCTGGCGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: GGSGGRRSLSRPGSS*DICRACPYCAGAGE
Trigger: CTCACCAGCGCCAGCACAATAAGGACAAGCCCTACAAATGTCCCAACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTCCAGATCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS-3UTR CAA 90 bp TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCC +
Preference number: 5 (lower is better)
Translates to: WQVWKVVRELGGSWRPQRGQKYG*LNRGSA
Trigger: GGCCGAACCTCGATTTAACAACCCGTACTTCTGGCC...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGTGGCCCTGGATTGTCTaGATGGAGTCCAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: CTLWSRGSPDLSHFRALKWPWIV*MESRSG
Trigger: CCCACTCCTGGACTCCATCAAGACAATCCAGGGCCA...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTGGCCCTGGATTGTCTaGATGGAGTCCAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGWPWIV*MESRSG
Trigger: CCCACTCCTGGACTCCATCAAGACAATCCAGGGCCA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CCA 90 bp TCTGGGGTGAGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTaGACATGTGCTTCATCAGGTAGGTCTCCGAGGTGTAGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SGVSDGSPGVPPLCV*TCASSGRSPRCRPA
Trigger: GGCGGGCCTACACCTCGGAGACCTACCTGATGAAGCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCAATGTCTTGCCCTCCTTaGCGGTCTCACCGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GQPLPGHCTLLEEILERAMSCPP*RSHRRP
Trigger: TGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACAT...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCC +
Preference number: 5 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFGTCCS*GSDMTA
Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGATCTGCATCTCAGACTaGGTGAAAAAGGTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: WVGESSSVSRRTTPPWALICISD*VKKVSG
Trigger: CCCGCTCACCTTTTTCACCAAGTCTGAGATGCAGAT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCCCAGGATGCGGGCACTaGTATGGTCTGTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGPGCGH*YGLSPV
Trigger: CACAGGCGACAGACCATACAAGTGCCCGCATCCTGG...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTCCACCACTGTGTGTTaGGACATGTGCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: WVGESSSVSRRTTPPWALSTTVC*DMCFIR
Trigger: CCTGATGAAGCACATGTCCAAACACACAGTGGTGGA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCC +
Preference number: 5 (lower is better)
Translates to: SSVSRRTTPPWALYPSGRGQKYG*LNRGSA
Trigger: GGCCGAACCTCGATTTAACAACCCGTACTTCTGGCC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTCCACCACTGTGTGTTaGGACATGTGCTTCATCAGG +
Preference number: 5 (lower is better)
Translates to: PLLTKARAKLRQFDWVTGSTTVC*DMCFIR
Trigger: CCTGATGAAGCACATGTCCAAACACACAGTGGTGGA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: WVGESSSVSRRTTPPWALSCSLI*LIRTRL
Trigger: CAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGTTACACCTGTATGTCTaGCCCTCCTTTGCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GRASVDQAFWQVWKVVRELHLYV*PSFAVS
Trigger: TGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAA...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTCCAGGATGCGGGCACTaGTATGGTCTGTCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLLWVLYIVPIYTDTHGFPGCGH*YGLSPV
Trigger: CACAGGCGACAGACCATACAAGTGCCCGCATCCTGG...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTTACACCTGTATGTCTaGCCCTCCTTTGCGGTCTCA +
Preference number: 5 (lower is better)
Translates to: EIVFGCHQNSPESCSWPGLHLYV*PSFAVS
Trigger: TGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAA...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGGCCATCAGCTGCTCTTaGATCTTGTTAATCAGGACC +
Preference number: 5 (lower is better)
Translates to: CGRGLLWVLYIVPIYTDTAISCS*ILLIRT
Trigger: GGTCCTGATTAACAAGATCAAAGAGCAGCTGATGGC...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGATCTGCATCTCAGACTaGGTGAAAAAGGTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: QGSNMRTKATIRSIRRRKICISD*VKKVSG
Trigger: CCCGCTCACCTTTTTCACCAAGTCTGAGATGCAGAT...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS-3UTR CAA 90 bp CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PLVLCIRLSSPFNFPFLASCSLI*LIRTRL
Trigger: CAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCT...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CAA 90 bp GGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCGGGCGCGGGA +
Preference number: 6 (lower is better)
Translates to: GCGTDCGCSPGTCCS*GSDMTAWLLSAGAG
Trigger: TCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 72 bp CTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTaGGGGTGCAGCCCGGGCACCTGCTGCAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LACSATSGCGTD*GCSPGTCCSLG
Trigger: GCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 72 bp TGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTaGAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: CSATSGCGTDCG*SPGTCCSLGSD
Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 72 bp TGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATGACCGCCTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: CGTDCGCSPGTC*SLGSDMTAWLL
Trigger: GAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 72 bp CCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGCGGCACGGACTGCGGG +
Preference number: 6 (lower is better)
Translates to: PRPVTVLVAGLA*SATSGCGTDCG
Trigger: CCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS GCA 72 bp ACCTGTGACAGTACTGGTGGCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCACGGACTGCGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: TCDSTGGRPRVQ*HVGLRHGLRVQ
Trigger: CTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CCA 72 bp GGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCGGGAGGGACTAGCAGT +
Preference number: 6 (lower is better)
Translates to: GTCCSLGSDMTA*LLSAGAGGTSS
Trigger: ACTGCTAGTCCCTCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS TCA 72 bp TCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTGTTCCACCACTGTGTG +
Preference number: 6 (lower is better)
Translates to: SHRDAGGLGPLG*VMAHQVFHHCV
Trigger: CACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CCA 72 bp TCTTGCCCTCCTTTGCGGTCTCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGACAGGGGGACCCCCTG +
Preference number: 6 (lower is better)
Translates to: SCPPLRSHRRPG*GTGQQGQGDPL
Trigger: CAGGGGGTCCCCCTGTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS TCA 72 bp ACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCCACCACTGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: TGMPGDSVLWGE*WLTRCSTTVCL
Trigger: CAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CAA 72 bp GCGGGCAGACCTTACACCTGTATGTCTTGCCCTCCTTaGCGGTCTCACCGGAGGCCAGGATGGGGTACGGGA +
Preference number: 6 (lower is better)
Translates to: AGRPYTCMSCPP*RSHRRPGWGTG
Trigger: TCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAAGGTCTGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CAA 72 bp CTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCCATCCTAGAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LGMVGGGGQKYG*LNRGSAILEGP
Trigger: AGGACCCTCTAGGATGGCCGAACCTCGATTTAACAACCCGTACTTCTGGCCCCCTCCTCCCACCATGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CAA 90 bp TCCAGCTGGCTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCCATCCTAGAGGGTCCTTTCCCACTT +
Preference number: 6 (lower is better)
Translates to: SSWLGMVGGGGQKYG*LNRGSAILEGPFPL
Trigger: AAGTGGGAAAGGACCCTCTAGGATGGCCGAACCTCGATTTAACAACCCGTACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
CDS CAA 72 bp GGCCGGATCTTTTCAGCCATCAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTGTCCAGCTGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: GRIFSAISCSLI*LIRTRLSSWLG
Trigger: GCCGAGCCAGCTGGACAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAAGATCCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9
ENSMUST00000170934.3
CDS CCA 72 bp AGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTaGACATGTGCTTCATCAGGTAGGTCTCCGAGGTGT +
Preference number: 6 (lower is better)
Translates to: SDGSPGVPPLCV*TCASSGRSPRC
Trigger: ACACCTCGGAGACCTACCTGATGAAGCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071108.14
ENSMUST00000106072.9