Pregenerated sensors for ZFP362 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028799Ensembl transcript IDs: ENSMUST00000071108.14, ENSMUST00000106072.9, ENSMUST00000170934.3
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGAGCCAGGTCTCACCTGGCACGCCCCCAACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCACCCTTTGGTCCCGCGGGTCTCCAG | + |
Preference number: 1 (lower is better) Translates to: GARSHLARPQPIPWA*HPAVTAPFGPAGLQ Trigger: CTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCCAGGTGAGACCTGGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | AGGGGAGGAGCCAGGTCTCACCTGGCACGCCCCCAACCCATTCCCTaGGCTTGCCACCCAGCCGTCACTGCACCCTTTGGTCCCGCGGGT | + |
Preference number: 1 (lower is better) Translates to: RGGARSHLARPQPIP*ACHPAVTAPFGPAG Trigger: ACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCCAGGTGAGACCTGGCTCCTCCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | GTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTGTCTGCCAAGTGGGCGGGGCGTCGC | + |
Preference number: 1 (lower is better) Translates to: VRELGGSWRPQRELG*VLPGSVSAKWAGRR Trigger: GCGACGCCCCGCCCACTTGGCAGACACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 90 bp | GGCACGCCCCCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTaGACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGT | + |
Preference number: 1 (lower is better) Translates to: GTPPTHSLGLPPSRH*TLWSRGSPDLSHFR Trigger: ACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGGGGCGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | TCCTTTGGAGGCTCCTATCCCTGCCGCAGGGCCTGGGGTCTGGGTTaGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGC | + |
Preference number: 1 (lower is better) Translates to: SFGGSYPCRRAWGLG*GVLICVEKDNPSLG Trigger: GCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCAGACCCCAGGCCCTGCGGCAGGGATAGGAGCCTCCAAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 90 bp | CTGGAAAGGGCACTTAGTCCCAGGCCCCCTCCCTCTCCATCCCCCTaGCCACAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCT | + |
Preference number: 1 (lower is better) Translates to: LERALSPRPPPSPSP*PQSGVVGEVADRFP Trigger: AGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTGTGGGCAGGGGGATGGAGAGGGAGGGGGCCTGGGACTAAGTGCCCTTTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | CCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAG | + |
Preference number: 1 (lower is better) Translates to: PTHSLGLPPSRHCTL*SRGSPDLSHFRALK Trigger: CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | AGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGG | + |
Preference number: 1 (lower is better) Translates to: SQPGRASVDQAFWQV*KVVRELGGSWRPQR Trigger: CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | GTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCCAGGCAGGCCTaGCAGCTGCTGTGCCCTCTGCTCACGAAGGCTAGGGCAAAGCTC | + |
Preference number: 1 (lower is better) Translates to: VSRPLSFPCPKARQA*QLLCPLLTKARAKL Trigger: GAGCTTTGCCCTAGCCTTCGTGAGCAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTTAGGGCACGGAAATGAGAGAGGTCTGGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR TCA 90 bp | CTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTaGCGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTCTCCTCCCAC | + |
Preference number: 1 (lower is better) Translates to: LCSRRLGQSSGSLTG*RVKGSLQLSPVSSH Trigger: GTGGGAGGAGACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | GCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTG | + |
Preference number: 1 (lower is better) Translates to: AFWQVWKVVRELGGS*RPQRELGWVLPGSV Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | GGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGG | + |
Preference number: 1 (lower is better) Translates to: GPSFLAGLEGCERAW*FLEAPAGIRLGAAW Trigger: CCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | TGCCCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTaGGTGACGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTCTCCTC | + |
Preference number: 1 (lower is better) Translates to: CPLLTKARAKLRQFD*VTGEGLTPAVSCLL Trigger: GAGGAGACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 90 bp | TGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCC | + |
Preference number: 1 (lower is better) Translates to: CGPSFLAGLEGCERA*WFLEAPAGIRLGAA Trigger: GGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 90 bp | AAAACCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATaGCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTGCCAG | + |
Preference number: 1 (lower is better) Translates to: KTQQTGSKCSEIVFG*HQNSPESCSWPGCQ Trigger: CTGGCAGCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGCCTGGGTCTGTGTCTaGCAAGTGGGCGGGGCGTCG | + |
Preference number: 2 (lower is better) Translates to: WQVWKVVRELGGSWRPQRAWVCV*QVGGAS Trigger: CGACGCCCCGCCCACTTGGCAGACACAGACCCAGGC...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 90 bp | CCCAACCCATTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTaGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAA | + |
Preference number: 2 (lower is better) Translates to: PNPFPGLATQPSLHP*VPRVSRPLSFPCPK Trigger: TTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGTTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 90 bp | GAGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCG | + |
Preference number: 2 (lower is better) Translates to: EPAREGFCGPSFLAG*EGCERAWWFLEAPA Trigger: CGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGAGGCTGGGTGCTGCCTaGGTCTGTGTCTGCCAAGTG | + |
Preference number: 2 (lower is better) Translates to: WQVWKVVRELGGSWRPQRRLGAA*VCVCQV Trigger: CACTTGGCAGACACAGACCCAGGCAGCACCCAGCCT...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCG | + |
Preference number: 2 (lower is better) Translates to: QSGVVGEVADRFPGQHRGCERAW*FLEAPA Trigger: CGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACA...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGCGAGGTAGACTGGGGTaGTCTTCAGGGCAGCAGGGG | + |
Preference number: 2 (lower is better) Translates to: VLICVEKDNPSLGTVPFWRGRLG*SSGQQG Trigger: CCCCTGCTGCCCTGAAGACCACCCCAGTCTACCTCG...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGCACCGAGGTAGACTaGGGTGGTCTTCAGGGCAGC | + |
Preference number: 2 (lower is better) Translates to: WVGESSSVSRRTTPPWALSTEVD*GGLQGS Trigger: GCTGCCCTGAAGACCACCCCAGTCTACCTCGGTGCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTCCAGAATCTTGCAGTTaGCCTGGCTGCCAGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: QSGVVGEVADRFPGQHRGPESCS*PGCQEP Trigger: TGGCTCCTGGCAGCCAGGCCAACTGCAAGATTCTGG...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 90 bp | CCTTTGACGTCCAGAACCCCAGGCCTCCCCTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCCG | + |
Preference number: 2 (lower is better) Translates to: PLTSRTPGLPSRPEV*AREVPTLPSGSLYP Trigger: CGGATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGGCCTGGGGTTCTGGACGTCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCA | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRPIPWA*HPAVTA Trigger: TGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCACCCATTCCCTGGGCTTaGCACCCAGCCGTCACTGCA | + |
Preference number: 2 (lower is better) Translates to: GQPLPGHCTLLEEILERAPIPWA*HPAVTA Trigger: TGCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGG...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACCCTCTCCATCCCCCTaGCCACAGTCTGGAGTGGTG | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRPSPSP*PQSGVV Trigger: CACCACTCCAGACTGTGGGCAGGGGGATGGAGAGGG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCCAGAATCTTGCAGTTaGCCTGGCTGCCAGGAGCCA | + |
Preference number: 2 (lower is better) Translates to: CTLWSRGSPDLSHFRALKPESCS*PGCQEP Trigger: TGGCTCCTGGCAGCCAGGCCAACTGCAAGATTCTGG...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR TCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: QSGVVGEVADRFPGQHRGRFGRL*ESLVVP Trigger: AGGAACCACCAAGCTCTCTCACAACCTTCCAAACCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCACCTCTCTCATTTCCGTaGCCTAAAGCCAGGCAGGCC | + |
Preference number: 2 (lower is better) Translates to: GQPLPGHCTLLEEILERAPLSFP*PKARQA Trigger: GGCCTGCCTGGCTTTAGGGCACGGAAATGAGAGAGG...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCA | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRGCERA*WFLEAP Trigger: TGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACAGGGAGGGCTTCTGTaGACCAAGCTTTCTGGCAGG | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRQGGLL*TKLSGR Trigger: CCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR TCA 90 bp | TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCTGTCTCCTCCCACCTaGGGGAGGGTGTCCCCTTTG | + |
Preference number: 2 (lower is better) Translates to: CGRGLLWVLYIVPIYTDTLSPPT*GRVSPL Trigger: CAAAGGGGACACCCTCCCTCAGGTGGGAGGAGACAG...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGCCTGGGTCTGTGTCTaGCAAGTGGGCGGGGCGTCG | + |
Preference number: 2 (lower is better) Translates to: PPSGKETPGNVKLVNQWRAWVCV*QVGGAS Trigger: CGACGCCCCGCCCACTTGGCAGACACAGACCCAGGC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCACCCAGCCGTCACTaGACCCTTTGGTCCCGCGGG | + |
Preference number: 2 (lower is better) Translates to: IVPIYTDTHGFRIGICLGPPSRH*TLWSRG Trigger: CCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTG | + |
Preference number: 2 (lower is better) Translates to: ALRSSLDATRTVQNLAVGQRELG*VLPGSV Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTG...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGAAAGCCAGGCAGGCCTaGCAGCTGCTGTGCCCTCTG | + |
Preference number: 2 (lower is better) Translates to: CGRGLLWVLYIVPIYTDTKARQA*QLLCPL Trigger: CAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTT...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGAC | + |
Preference number: 2 (lower is better) Translates to: CGRGLLWVLYIVPIYTDTRHCTL*SRGSPD Trigger: GTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACG...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR GCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGCAGACAGGTTCAAAGTaGTCTGAGATCGTCTTTGGA | + |
Preference number: 2 (lower is better) Translates to: WVGESSSVSRRTTPPWALQTGSK*SEIVFG Trigger: TCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTG...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGACAAGACCTGAGGTTTTaGCCAGAGAAGTTCCCACGC | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRQDLRF*PEKFPR Trigger: GCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTG...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGGCAGGGTCTGCTCCTaGGTCCTCCTTTGGAGGCTC | + |
Preference number: 2 (lower is better) Translates to: QGSNMRTKATIRSIRRRKGRVCS*VLLWRL Trigger: GAGCCTCCAAAGGAGGACCCAGGAGCAGACCCTGCC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR TCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCT | + |
Preference number: 2 (lower is better) Translates to: SSVSRRTTPPWALYPSGRRFGRL*ESLVVP Trigger: AGGAACCACCAAGCTCTCTCACAACCTTCCAAACCT...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCGTGGACCAAGCTTTCTaGCAGGTTTGGAAGGTTGTG | + |
Preference number: 2 (lower is better) Translates to: DLRFWPEKFPRCPLVLCIVDQAF*QVWKVV Trigger: CACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCAC...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCCCTGCCCACAGTCTaGAGTGGTGGGAGAGGTAGC | + |
Preference number: 2 (lower is better) Translates to: IVPIYTDTHGFRIGICLGPLPTV*SGGRGS Trigger: GCTACCTCTCCCACCACTCCAGACTGTGGGCAGGGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGACAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTG | + |
Preference number: 2 (lower is better) Translates to: PPSGKETPGNVKLVNQWRQRELG*VLPGSV Trigger: CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTG...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTA | + |
Preference number: 2 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFELGGS*RPQREL Trigger: TAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTCAGGGAGGGCTTCTGTaGACCAAGCTTTCTGGCAGG | + |
Preference number: 2 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFQGGLL*TKLSGR Trigger: CCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTG...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAATCTTGCAGTTGGCCTaGCTGCCAGGAGCCAGCCAG | + |
Preference number: 2 (lower is better) Translates to: PPSGKETPGNVKLVNQWRILQLA*LPGASQ Trigger: CTGGCTGGCTCCTGGCAGCCAGGCCAACTGCAAGAT...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR TCA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGTTTCTTCTCTGGGGGTaGTGTGGAAGGGGGCTTCTC | + |
Preference number: 2 (lower is better) Translates to: QGSNMRTKATIRSIRRRKFLLWG*CGRGLL Trigger: GAGAAGCCCCCTTCCACATCACCCCCAGAGAAGAAA...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAGGTTGTGAGAGAGCTTaGTGGTTCCTGGAGGCCCCA | + |
Preference number: 2 (lower is better) Translates to: PLVLCIRLSSPFNFPFLAGCERA*WFLEAP Trigger: TGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACC...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR TCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCTCCCCTCAAGACCTaGGGTTTTGGCCAGAGAAGT | + |
Preference number: 2 (lower is better) Translates to: IVPIYTDTHGFRIGICLGPPLKT*GFGQRS Trigger: ACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGTCCCACGCTGCCCTCTaGTTCTCTGTATCCGTCTGT | + |
Preference number: 2 (lower is better) Translates to: IVPIYTDTHGFRIGICLGSHAAL*FSVSVC Trigger: ACAGACGGATACAGAGAACCAGAGGGCAGCGTGGGA...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR-3UTR CCA 90 bp | CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTT | + |
Preference number: 2 (lower is better) Translates to: PNRQVQSALRSSLDATRTAFWQV*KVVREL Trigger: AAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGC...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 90 bp | AAAAGAAAACCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCT | + |
Preference number: 2 (lower is better) Translates to: KRKPNRQVQSALRSS*DATRTVQNLAVGLA Trigger: AGCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR TCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAAGGTTCAAAGTGCTCTaGGATCGTCTTTGGATGCCA | + |
Preference number: 2 (lower is better) Translates to: PPSGKETPGNVKLVNQWRRFKVL*DRLWMP Trigger: TGGCATCCAAAGACGATCTCAGAGCACTTTGAACCT...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
||
3UTR CCA 72 bp | CTTGGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTaGGTGCTGCCTGGGTCTGTGTCTGCCAAGTGGGCG | + |
Preference number: 3 (lower is better) Translates to: LGGSWRPQRELG*VLPGSVSAKWA Trigger: CGCCCACTTGGCAGACACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | TCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTTaGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGT | + |
Preference number: 3 (lower is better) Translates to: SLGLPPSRHCTL*SRGSPDLSHFR Trigger: ACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 72 bp | CATTTCCGTGCCCTAAAGCCAGGCAGGCCTGGCAGCTaGTGTGCCCTCTGCTCACGAAGGCTAGGGCAAAGC | + |
Preference number: 3 (lower is better) Translates to: HFRALKPGRPGS*CALCSRRLGQS Trigger: GCTTTGCCCTAGCCTTCGTGAGCAGAGGGCACAGCAGCTGCCAGGCCTGCCTGGCTTTAGGGCACGGAAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | TTGGAGGCTCCTATCCCTGCCGCAGGGCCTGGGGTCTaGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACA | + |
Preference number: 3 (lower is better) Translates to: LEAPIPAAGPGV*VGESSSVSRRT Trigger: TGTCCTTCTCGACACAGATGAGGACTCCCCAACCCAGACCCCAGGCCCTGCGGCAGGGATAGGAGCCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR TCA 72 bp | CTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTaGGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGG | + |
Preference number: 3 (lower is better) Translates to: LWTKLSGRFGRL*ESLVVPGGPSG Trigger: CCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR TCA 72 bp | CGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTaGCGGGTGAAGGGCTCACTCCAGCTGTCTCCTGTC | + |
Preference number: 3 (lower is better) Translates to: RRLGQSSGSLTG*RVKGSLQLSPV Trigger: GACAGGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | CAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTaGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCT | + |
Preference number: 3 (lower is better) Translates to: QVWKVVRELGGS*RPQRELGWVLP Trigger: AGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | CTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTaGGTGACGGGTGAAGGGCTCACTCCAGCTGTCTCC | + |
Preference number: 3 (lower is better) Translates to: LTKARAKLRQFD*VTGEGLTPAVS Trigger: GGAGACAGCTGGAGTGAGCCCTTCACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | CCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTaGAAAGGGCACTTAGTCCCAGGCCCCCTCCCTCTC | + |
Preference number: 3 (lower is better) Translates to: PSLGTVPFWKKF*KGHLVPGPLPL Trigger: GAGAGGGAGGGGGCCTGGGACTAAGTGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTC | + |
Preference number: 3 (lower is better) Translates to: WVGESSSVSRRTTPPWALALRSS*DATRTV Trigger: GACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCGAACAGTCCAGAATCTaGCAGTTGGCCTGGCTGCCA | + |
Preference number: 3 (lower is better) Translates to: PQDLRFWPEKFPRCPLVLEQSRI*QLAWLP Trigger: TGGCAGCCAGGCCAACTGCAAGATTCTGGACTGTTC...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACG | + |
Preference number: 3 (lower is better) Translates to: PLLTKARAKLRQFDWVTGSRPEV*AREVPT Trigger: CGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | TTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTaGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGT | + |
Preference number: 3 (lower is better) Translates to: FLAGLEGCERAW*FLEAPAGIRLG Trigger: ACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTaGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGG | + |
Preference number: 3 (lower is better) Translates to: GRASVDQAFWQV*KVVRELGGSWR Trigger: CCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | AGCCAGCCAGGGAGGGCTTCTGTGGACCAAGCTTTCTaGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGT | + |
Preference number: 3 (lower is better) Translates to: SQPGRASVDQAF*QVWKVVRELGG Trigger: ACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCTGGCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGACCCATTCCCTGGGCTaGCCACCCAGCCGTCACTGC | + |
Preference number: 3 (lower is better) Translates to: IVPIYTDTHGFRIGICLGTHSLG*PPSRHC Trigger: GCAGTGACGGCTGGGTGGCAAGCCCAGGGAATGGGT...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCCTGGGGTCTGGGTaGGGGAGTCCTCATCTGTGT | + |
Preference number: 3 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFGLGSG*GSPHLC Trigger: ACACAGATGAGGACTCCCCAACCCAGACCCCAGGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCT | + |
Preference number: 3 (lower is better) Translates to: SSVSRRTTPPWALYPSGRSFLAG*EGCERA Trigger: AGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCT...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CCA 72 bp | GAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTaGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAG | + |
Preference number: 3 (lower is better) Translates to: ESSSVSRRTTPP*ALYPSGRNSGK Trigger: CTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 72 bp | CAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATaGCACCAGAACAGTCCAGAATCTTGCAGTTGGCCT | + |
Preference number: 3 (lower is better) Translates to: QTGSKCSEIVFG*HQNSPESCSWP Trigger: AGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR-3UTR CAA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCT | + |
Preference number: 3 (lower is better) Translates to: IVPIYTDTHGFRIGICLGSFLAG*EGCERA Trigger: AGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCT...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR TCA 72 bp | CAAAAAGAAAACCCAACAGACAGGTTCAAAGTGCTCTaGGATCGTCTTTGGATGCCACCAGAACAGTCCAGA | + |
Preference number: 3 (lower is better) Translates to: QKENPTDRFKVL*DRLWMPPEQSR Trigger: TCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR GCA 72 bp | GGGAACAAAAAGAAAACCCAACAGACAGGTTCAAAGTaGTCTGAGATCGTCTTTGGATGCCACCAGAACAGT | + |
Preference number: 3 (lower is better) Translates to: GNKKKTQQTGSK*SEIVFGCHQNS Trigger: ACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGGTTTTCTTTTTGTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: QSGVVGEVADRFPGQHRGRPRVQ*HVGLRH Trigger: GTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCG...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALVAGLA*SATSGC Trigger: GCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTGAGGCCCGCCCGCACATaGTGCAGCAGTAGGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: GGSWRPQRELGWVLPGSVRPART*CSSRPW Trigger: CCAAGGCCTACTGCTGCAGCATGTGCGGGCGGGCCT...CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGCTTGGGCAGCGACATaGCCGCCTGGCTGCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALAWAAT*PPGCSR Trigger: CCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: PQDLRFWPEKFPRCPLVLRPRVQ*HVGLRH Trigger: GTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCG...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCG | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKSDMTA*LLSAGA Trigger: CGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGGCGGCTCTGGCTGGTaGTGGTGGGTGTGGACGGGG | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWGGSGW*WWVWTG Trigger: CCCCGTCCACACCCACCACCACCAGCCAGAGCCGCC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 72 bp | TTCCCTGGGCTTGCCACCCAGCCGTCACTGCACCCTTaGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCG | + |
Preference number: 4 (lower is better) Translates to: FPGLATQPSLHP*VPRVSRPLSFP Trigger: CGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCAGTGACGGCTGGGTGGCAAGCCCAGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGCTTGGGCAGCGACATaGCCGCCTGGCTGCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWAWAAT*PPGCSR Trigger: CCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATG | + |
Preference number: 4 (lower is better) Translates to: QSGVVGEVADRFPGQHRGSPGTC*SLGSDM Trigger: CATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGCCCGCCCGCACATGCTaGAGCAGTAGGCCTTGGCGT | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALPARTC*SSRPWR Trigger: ACGCCAAGGCCTACTGCTGCAGCATGTGCGGGCGGG...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGAGGCCCGCCCGCACATaGTGCAGCAGTAGGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: WQVWKVVRELGGSWRPQRRPART*CSSRPW Trigger: CCAAGGCCTACTGCTGCAGCATGTGCGGGCGGGCCT...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTCCAGCTGGCTCGGCATaGTGGGAGGAGGGGGCCAGA | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGPAGSA*WEEGAR Trigger: TCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGG...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGCCAGCTGGCTCGGCATaGTGGGAGGAGGGGGCCAGA | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWPAGSA*WEEGAR Trigger: TCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGG...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GGTGGTTCCTGGAGGCCCCAGCGGGAATTAGGCTGGGTGCTGCCTGGGTCTGTGCTGGGTTCTCTGCCTTaGTCTTTTTCCGGCCGCGTT | + |
Preference number: 4 (lower is better) Translates to: GGSWRPQRELGWVLPGSVLGSLP*SFSGRV Trigger: AACGCGGCCGGAAAAAGATCAAGGCAGAGAACCCAG...CACAGACCCAGGCAGCACCCAGCCTAATTCCCGCTGGGGCCTCCAGGAACCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGGAGGGAGGCGGAGTCTaGGTAGGCCCGGTAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALEGGGV*VGPVAV Trigger: AACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTC...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGCTGGCTCGGCATGGTaGGAGGAGGGGGCCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGAGSAW*EEGARS Trigger: ACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGGCTCTGGCTGGTGGTaGTGGGTGTGGACGGGGTAC | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWGSGWW*WVWTGY Trigger: GTACCCCGTCCACACCCACCACCACCAGCCAGAGCC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTAGCAGTGGTAGGGCTTaGCACCCAGGTGGATGCGCA | + |
Preference number: 4 (lower is better) Translates to: QSGVVGEVADRFPGQHRGSSGRA*HPGGCA Trigger: TGCGCATCCACCTGGGTGTCAAGCCCTACCACTGCT...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGGCCTTGGCGTGCTTaGTGGCATGGGCAGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALRPWRA*WHGQRG Trigger: ACCTCTCTGCCCATGCCATCAAGCACGCCAAGGCCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAG | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALCLALL*GLTGGQ Trigger: CTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGATTCGCACCGGGATaGCGGGGGACTCGGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKRFAPG*RGTRSS Trigger: AGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGA | + |
Preference number: 4 (lower is better) Translates to: WQVWKVVRELGGSWRPQRHRRPG*GTGQQG Trigger: TCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTG...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTGCAGAGAGGTGGATCTaGAGGGAGGCGGAGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: QSGVVGEVADRFPGQHRGAERWI*REAESE Trigger: CTCAGACTCCGCCTCCCTCCAGATCCACCTCTCTGC...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGGAGGTGGGTGGCAGGTaGGGTGGCCGGATCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKEVGGR*GGRIFS Trigger: TGAAAAGATCCGGCCACCTCACCTGCCACCCACCTC...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGGCCCTGGATTGTCTTaGTGGAGTCCAGGAGTGGGG | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGGPGLS*WSPGVG Trigger: CCCCACTCCTGGACTCCATCAAGACAATCCAGGGCC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGAGCAGTGGTAGGGCTTaGCACCCAGGTGGATGCGCA | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKSSGRA*HPGGCA Trigger: TGCGCATCCACCTGGGTGTCAAGCCCTACCACTGCT...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGAC | + |
Preference number: 4 (lower is better) Translates to: EIVFGCHQNSPESCSWPGCSPGT*CSLGSD Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGCTCTGGCTGGTGGTaGTGGGTGTGGACGGGGTAC | + |
Preference number: 4 (lower is better) Translates to: SSVSRRTTPPWALYPSGRGSGWW*WVWTGY Trigger: GTACCCCGTCCACACCCACCACCACCAGCCAGAGCC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGGCGATGAGGCGGCTCTaGCTGGTGGTGGTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: GRASVDQAFWQVWKVVREAMRRL*LVVVGV Trigger: CACACCCACCACCACCAGCCAGAGCCGCCTCATCGC...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 72 bp | TCCAGAACCCCAGGCCTCCCCTCAAGACCTGAGGTTTaGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCT | + |
Preference number: 4 (lower is better) Translates to: SRTPGLPSRPEV*AREVPTLPSGS Trigger: AGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGGGGAGGCCTGGGGTTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCCTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTG | + |
Preference number: 4 (lower is better) Translates to: DLRFWPEKFPRCPLVLCILGPLG*VMAHQV Trigger: CACCTGGTGAGCCATCACTCACCCCAGAGGACCGAG...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGACTAGCAGTGGCTGCTaGGATGAGGCTGAGGTGGGT | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWTSSGC*DEAEVG Trigger: ACCCACCTCAGCCTCATCGCAGCAGCCACTGCTAGT...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFVAGLA*SATSGC Trigger: GCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGAGATTCGCACCGGGATaGCGGGGGACTCGGTCCTCT | + |
Preference number: 4 (lower is better) Translates to: GRASVDQAFWQVWKVVRERFAPG*RGTRSS Trigger: AGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCT...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGGACAGGGGGACCCCCTaGGTTCTCTGCCTTGATCTT | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKDRGTP*VLCLDL Trigger: AAGATCAAGGCAGAGAACCCAGGGGGTCCCCCTGTC...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGGTATGTTGCTGGAGGTaGGAGAGCTGCCGGAAGGAC | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWVCCWR*ESCRKD Trigger: GTCCTTCCGGCAGCTCTCCCACCTCCAGCAACATAC...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTGTATGTTGCTGGAGGTaGGAGAGCTGCCGGAAGGAC | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGVCCWR*ESCRKD Trigger: GTCCTTCCGGCAGCTCTCCCACCTCCAGCAACATAC...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCTTGTGCTGGCGCTGGTaGGACTGGAGGTTGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: DLRFWPEKFPRCPLVLCILCWRW*DWRLES Trigger: GCTCTCCAACCTCCAGTCTCACCAGCGCCAGCACAA...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGATGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAG | + |
Preference number: 4 (lower is better) Translates to: SSVSRRTTPPWALYPSGRCLALL*GLTGGQ Trigger: CTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACA...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCGGCTCTGGCTGGTaGTGGTGGGTGTGGACGGGG | + |
Preference number: 4 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFGGSGW*WWVWTG Trigger: CCCCGTCCACACCCACCACCACCAGCCAGAGCCGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCAAGACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCGGGCCAAGCAGACCGTaGCCCTGGATTGTCTTGATG | + |
Preference number: 4 (lower is better) Translates to: PQDLRFWPEKFPRCPLVLGPSRP*PWIVLM Trigger: CATCAAGACAATCCAGGGCCACGGTCTGCTTGGCCC...GAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTCTTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTCGCCTGTGTGGATTCTaGTATGTTGCTGGAGGTGGG | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGRLCGF*YVAGGG Trigger: CCCACCTCCAGCAACATACCAGAATCCACACAGGCG...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGCGCCTGTGTGGATTCTaGTATGTTGCTGGAGGTGGG | + |
Preference number: 4 (lower is better) Translates to: CTLWSRGSPDLSHFRALKRLCGF*YVAGGG Trigger: CCCACCTCCAGCAACATACCAGAATCCACACAGGCG...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CAGTCTGGAGTGGTGGGAGAGGTAGCCGATAGGTTTCCTGGCCAGCACCGAGGTGGTCTGTCGCCTGTGTaGATTCTGGTATGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: QSGVVGEVADRFPGQHRGGLSPV*ILVCCW Trigger: CCAGCAACATACCAGAATCCACACAGGCGACAGACC...ACCTCGGTGCTGGCCAGGAAACCTATCGGCTACCTCTCCCACCACTCCAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTGGAGGTTGGAGAGCTaGGTGAAAGCCTTTTCGCAG | + |
Preference number: 4 (lower is better) Translates to: PLLTKARAKLRQFDWVTGWRLES*VKAFSQ Trigger: CTGCGAAAAGGCTTTCACTCAGCTCTCCAACCTCCA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGAC | + |
Preference number: 4 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFCSPGT*CSLGSD Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACAGCTGGCTCGGCATGGTaGGAGGAGGGGGCCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: PNRQVQSALRSSLDATRTAGSAW*EEGARS Trigger: ACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGC...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCGCGTGCTTGATGGCATaGGCAGAGAGGTGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: DLRFWPEKFPRCPLVLCIACLMA*AERWIW Trigger: CCAGATCCACCTCTCTGCCCATGCCATCAAGCACGC...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 72 bp | AGGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTaGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: REGFCGPSFLAG*EGCERAWWFLE Trigger: CTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGGAGGTGGGTGGCAGGTaGGGTGGCCGGATCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: CGRGLLWVLYIVPIYTDTEVGGR*GGRIFS Trigger: TGAAAAGATCCGGCCACCTCACCTGCCACCCACCTC...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGAGGGAGGCGGAGTCTaGGTAGGCCCGGTAGCAGTT | + |
Preference number: 4 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFEGGGV*VGPVAV Trigger: AACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCACTAGCAGTGGCTGCTaGGATGAGGCTGAGGTGGGT | + |
Preference number: 4 (lower is better) Translates to: ALRSSLDATRTVQNLAVGTSSGC*DEAEVG Trigger: ACCCACCTCAGCCTCATCGCAGCAGCCACTGCTAGT...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGTTTTCGCAGCCAGGATaGGGGCACTTGTATGGTCTG | + |
Preference number: 4 (lower is better) Translates to: GRASVDQAFWQVWKVVREFSQPG*GHLYGL Trigger: CAGACCATACAAGTGCCCGCATCCTGGCTGCGAAAA...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GACCTGAGGTTTTGGCCAGAGAAGTTCCCACGCTGCCCTCTGGTTCTCTGTATCTTTTCGCAGCCAGGATaGGGGCACTTGTATGGTCTG | + |
Preference number: 4 (lower is better) Translates to: DLRFWPEKFPRCPLVLCIFSQPG*GHLYGL Trigger: CAGACCATACAAGTGCCCGCATCCTGGCTGCGAAAA...GATACAGAGAACCAGAGGGCAGCGTGGGAACTTCTCTGGCCAAAACCTCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGCCCGCCCGCACATGCTaGAGCAGTAGGCCTTGGCGT | + |
Preference number: 4 (lower is better) Translates to: IVPIYTDTHGFRIGICLGPARTC*SSRPWR Trigger: ACGCCAAGGCCTACTGCTGCAGCATGTGCGGGCGGG...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGCGATGAGGCGGCTCTaGCTGGTGGTGGTGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: IVPIYTDTHGFRIGICLGAMRRL*LVVVGV Trigger: CACACCCACCACCACCAGCCAGAGCCGCCTCATCGC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCAGCAGACCGTGGCCCTaGATTGTCTTGATGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: EIVFGCHQNSPESCSWPGSRPWP*IVLMES Trigger: GGACTCCATCAAGACAATCCAGGGCCACGGTCTGCT...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTTGGATGCCACCAGAACACACCGGAGGCCAGGATaGGGTACGGGACAACAAGGA | + |
Preference number: 4 (lower is better) Translates to: PNRQVQSALRSSLDATRTHRRPG*GTGQQG Trigger: TCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTG...TGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | GCTCTGAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGGTTCTCTGCCTTaGTCTTTTTCCGGCCGCGTT | + |
Preference number: 4 (lower is better) Translates to: ALRSSLDATRTVQNLAVGLGSLP*SFSGRV Trigger: AACGCGGCCGGAAAAAGATCAAGGCAGAGAACCCAG...GCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTG | + |
Preference number: 4 (lower is better) Translates to: PPSGKETPGNVKLVNQWRLGPLG*VMAHQV Trigger: CACCTGGTGAGCCATCACTCACCCCAGAGGACCGAG...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCGGTCTGTCGCCTGTGTaGATTCTGGTATGTTGCTGG | + |
Preference number: 4 (lower is better) Translates to: EIVFGCHQNSPESCSWPGGLSPV*ILVCCW Trigger: CCAGCAACATACCAGAATCCACACAGGCGACAGACC...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCATTGTGCTGGCGCTGGTaGGACTGGAGGTTGGAGAGC | + |
Preference number: 4 (lower is better) Translates to: PLVLCIRLSSPFNFPFLALCWRW*DWRLES Trigger: GCTCTCCAACCTCCAGTCTCACCAGCGCCAGCACAA...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAAGGCCTTGGCGTGCTTaGTGGCATGGGCAGAGAGGT | + |
Preference number: 4 (lower is better) Translates to: PLVLCIRLSSPFNFPFLARPWRA*WHGQRG Trigger: ACCTCTCTGCCCATGCCATCAAGCACGCCAAGGCCT...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCC | + |
Preference number: 4 (lower is better) Translates to: IVPIYTDTHGFRIGICLGVLWGE*WLTRCS Trigger: GGAACACCTGGTGAGCCATCACTCACCCCAGAGGAC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCC | + |
Preference number: 4 (lower is better) Translates to: PPSGKETPGNVKLVNQWRVLWGE*WLTRCS Trigger: GGAACACCTGGTGAGCCATCACTCACCCCAGAGGAC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGACAGGGGGACCCCCTaGGTTCTCTGCCTTGATCTT | + |
Preference number: 4 (lower is better) Translates to: QGSNMRTKATIRSIRRRKDRGTP*VLCLDL Trigger: AAGATCAAGGCAGAGAACCCAGGGGGTCCCCCTGTC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCCCAGTGGAAAAGAAACCCCAGGAAACGTTAAACTGGTAAATCAATGGCGAGCAGAGAGGTGGATCTaGAGGGAGGCGGAGTCTGAG | + |
Preference number: 4 (lower is better) Translates to: PPSGKETPGNVKLVNQWRAERWI*REAESE Trigger: CTCAGACTCCGCCTCCCTCCAGATCCACCTCTCTGC...TCGCCATTGATTTACCAGTTTAACGTTTCCTGGGGTTTCTTTTCCACTGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGGGTTGGAGAGCTGAGTaGAAGCCTTTTCGCAGCCAG | + |
Preference number: 4 (lower is better) Translates to: QGSNMRTKATIRSIRRRKGWRAE*KPFRSQ Trigger: CTGGCTGCGAAAAGGCTTTCACTCAGCTCTCCAACC...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTTTTCAGCCATCAGCTaGTCTTTGATCTTGTTAATC | + |
Preference number: 4 (lower is better) Translates to: WVGESSSVSRRTTPPWALFSAIS*SLILLI Trigger: GATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTAGCAGACCGTGGCCCTaGATTGTCTTGATGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFSRPWP*IVLMES Trigger: GGACTCCATCAAGACAATCCAGGGCCACGGTCTGCT...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGGGCCAAGCAGACCGTaGCCCTGGATTGTCTTGATG | + |
Preference number: 4 (lower is better) Translates to: IVPIYTDTHGFRIGICLGGPSRP*PWIVLM Trigger: CATCAAGACAATCCAGGGCCACGGTCTGCTTGGCCC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CCA 90 bp | CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAGCGTGCTTGATGGCATaGGCAGAGAGGTGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: PLVLCIRLSSPFNFPFLAACLMA*AERWIW Trigger: CCAGATCCACCTCTCTGCCCATGCCATCAAGCACGC...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | ATAGTTCCTATATACACGGACACGCATGGCTTTCGGATTGGGATATGTCTTGGGGGTTGGAGAGCTGAGTaGAAGCCTTTTCGCAGCCAG | + |
Preference number: 4 (lower is better) Translates to: IVPIYTDTHGFRIGICLGGWRAE*KPFRSQ Trigger: CTGGCTGCGAAAAGGCTTTCACTCAGCTCTCCAACC...CCCAAGACATATCCCAATCCGAAAGCCATGCGTGTCCGTGTATATAGGAACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR TCA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGTGGAGGTTGGAGAGCTaGGTGAAAGCCTTTTCGCAG | + |
Preference number: 4 (lower is better) Translates to: QGSNMRTKATIRSIRRRKWRLES*VKAFSQ Trigger: CTGCGAAAAGGCTTTCACTCAGCTCTCCAACCTCCA...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR GCA 90 bp | GTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGTTTTCAGCCATCAGCTaGTCTTTGATCTTGTTAATC | + |
Preference number: 4 (lower is better) Translates to: VLICVEKDNPSLGTVPFWFSAIS*SLILLI Trigger: GATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAA...CCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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3UTR CAA 72 bp | CCCAACAGACAGGTTCAAAGTGCTCTGAGATCGTCTTaGGATGCCACCAGAACAGTCCAGAATCTTGCAGTT | + |
Preference number: 4 (lower is better) Translates to: PNRQVQSALRSS*DATRTVQNLAV Trigger: AACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTCAGAGCACTTTGAACCTGTCTGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS GCA 90 bp | ACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCGGGC | + |
Preference number: 5 (lower is better) Translates to: TSGCGTDCGCSPGTC*SLGSDMTAWLLSAG Trigger: GCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 90 bp | GCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTaGTGCAGCTTGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCG | + |
Preference number: 5 (lower is better) Translates to: ATSGCGTDCGCSPGT*CSLGSDMTAWLLSA Trigger: CGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 90 bp | GGCCTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTaGAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCC | + |
Preference number: 5 (lower is better) Translates to: GLACSATSGCGTDCG*SPGTCCSLGSDMTA Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 90 bp | GTGGCCGGCCTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTaGGGGTGCAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATG | + |
Preference number: 5 (lower is better) Translates to: VAGLACSATSGCGTD*GCSPGTCCSLGSDM Trigger: CATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 90 bp | AAGCCCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCAC | + |
Preference number: 5 (lower is better) Translates to: KPQTCDSTGGRPRVQ*HVGLRHGLRVQPGH Trigger: GTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGGGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CCA 90 bp | TGCAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCGGGAGGGACTAGCAGTGGCTGCTGC | + |
Preference number: 5 (lower is better) Translates to: CSPGTCCSLGSDMTA*LLSAGAGGTSSGCC Trigger: GCAGCAGCCACTGCTAGTCCCTCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 90 bp | GAGGAAAGCCCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTGCAGCCCG | + |
Preference number: 5 (lower is better) Translates to: EESPRPVTVLVAGLA*SATSGCGTDCGCSP Trigger: CGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGGGCTTTCCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CCA 90 bp | ACCTGTATGTCTTGCCCTCCTTTGCGGTCTCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGACAGGGGGACCCCCTGGGTTCTCTG | + |
Preference number: 5 (lower is better) Translates to: TCMSCPPLRSHRRPG*GTGQQGQGDPLGSL Trigger: CAGAGAACCCAGGGGGTCCCCCTGTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS TCA 90 bp | GAGATTCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCCACCACTGTGTGTTTGGACATGTGC | + |
Preference number: 5 (lower is better) Translates to: EIRTGMPGDSVLWGE*WLTRCSTTVCLDMC Trigger: GCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS TCA 90 bp | CAGAGAGATTCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTGGACAT | + |
Preference number: 5 (lower is better) Translates to: QRDSHRDAGGLGPLG*VMAHQVFHHCVFGH Trigger: ATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGAATCTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCC | + |
Preference number: 5 (lower is better) Translates to: EIVFGCHQNSPESCSWPGGTCCS*GSDMTA Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS GCA 90 bp | AAAGGTGAGCGGGCAGACCTTACACCTGTATGTCTTGCCCTCCTTTaGGGTCTCACCGGAGGCCAGGATGGGGTACGGGACAACAAGGAC | + |
Preference number: 5 (lower is better) Translates to: KGERADLTPVCLALL*GLTGGQDGVRDNKD Trigger: GTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAAGGTCTGCCCGCTCACCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CCA 90 bp | GGTGGATCTGGAGGGAGGCGGAGTCTGAGTAGGCCCGGTAGCAGTTaGGACATTTGTAGGGCTTGTCCTTATTGTGCTGGCGCTGGTGAG | + |
Preference number: 5 (lower is better) Translates to: GGSGGRRSLSRPGSS*DICRACPYCAGAGE Trigger: CTCACCAGCGCCAGCACAATAAGGACAAGCCCTACAAATGTCCCAACTGCTACCGGGCCTACTCAGACTCCGCCTCCCTCCAGATCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS-3UTR CAA 90 bp | TGGCAGGTTTGGAAGGTTGTGAGAGAGCTTGGTGGTTCCTGGAGGCCCCAGCGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCC | + |
Preference number: 5 (lower is better) Translates to: WQVWKVVRELGGSWRPQRGQKYG*LNRGSA Trigger: GGCCGAACCTCGATTTAACAACCCGTACTTCTGGCC...CCGCTGGGGCCTCCAGGAACCACCAAGCTCTCTCACAACCTTCCAAACCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TGCACCCTTTGGTCCCGCGGGTCTCCAGACCTCTCTCATTTCCGTGCCCTAAAGTGGCCCTGGATTGTCTaGATGGAGTCCAGGAGTGGG | + |
Preference number: 5 (lower is better) Translates to: CTLWSRGSPDLSHFRALKWPWIV*MESRSG Trigger: CCCACTCCTGGACTCCATCAAGACAATCCAGGGCCA...CTTTAGGGCACGGAAATGAGAGAGGTCTGGAGACCCGCGGGACCAAAGGGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTGGCCCTGGATTGTCTaGATGGAGTCCAGGAGTGGG | + |
Preference number: 5 (lower is better) Translates to: PLLTKARAKLRQFDWVTGWPWIV*MESRSG Trigger: CCCACTCCTGGACTCCATCAAGACAATCCAGGGCCA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CCA 90 bp | TCTGGGGTGAGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTaGACATGTGCTTCATCAGGTAGGTCTCCGAGGTGTAGGCCCGCC | + |
Preference number: 5 (lower is better) Translates to: SGVSDGSPGVPPLCV*TCASSGRSPRCRPA Trigger: GGCGGGCCTACACCTCGGAGACCTACCTGATGAAGCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAAATTCTGGAAAGGGCAATGTCTTGCCCTCCTTaGCGGTCTCACCGGAGGCCA | + |
Preference number: 5 (lower is better) Translates to: GQPLPGHCTLLEEILERAMSCPP*RSHRRP Trigger: TGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACAT...TGCCCTTTCCAGAATTTCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCC | + |
Preference number: 5 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFGTCCS*GSDMTA Trigger: GGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGATCTGCATCTCAGACTaGGTGAAAAAGGTGAGCGGG | + |
Preference number: 5 (lower is better) Translates to: WVGESSSVSRRTTPPWALICISD*VKKVSG Trigger: CCCGCTCACCTTTTTCACCAAGTCTGAGATGCAGAT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCCCAGGATGCGGGCACTaGTATGGTCTGTCGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: EIVFGCHQNSPESCSWPGPGCGH*YGLSPV Trigger: CACAGGCGACAGACCATACAAGTGCCCGCATCCTGG...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTCCACCACTGTGTGTTaGGACATGTGCTTCATCAGG | + |
Preference number: 5 (lower is better) Translates to: WVGESSSVSRRTTPPWALSTTVC*DMCFIR Trigger: CCTGATGAAGCACATGTCCAAACACACAGTGGTGGA...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGTACCCTTCTGGAAGAGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCC | + |
Preference number: 5 (lower is better) Translates to: SSVSRRTTPPWALYPSGRGQKYG*LNRGSA Trigger: GGCCGAACCTCGATTTAACAACCCGTACTTCTGGCC...TCTTCCAGAAGGGTACAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | CCTCTGCTCACGAAGGCTAGGGCAAAGCTCAGGCAGTTTGACTGGGTGACGGGTTCCACCACTGTGTGTTaGGACATGTGCTTCATCAGG | + |
Preference number: 5 (lower is better) Translates to: PLLTKARAKLRQFDWVTGSTTVC*DMCFIR Trigger: CCTGATGAAGCACATGTCCAAACACACAGTGGTGGA...ACCCGTCACCCAGTCAAACTGCCTGAGCTTTGCCCTAGCCTTCGTGAGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TGGGTTGGGGAGTCCTCATCTGTGTCGAGAAGGACAACCCCTCCCTGGGCACTGAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: WVGESSSVSRRTTPPWALSCSLI*LIRTRL Trigger: CAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCT...CAGTGCCCAGGGAGGGGTTGTCCTTCTCGACACAGATGAGGACTCCCCAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GGGAGGGCTTCTGTGGACCAAGCTTTCTGGCAGGTTTGGAAGGTTGTGAGAGAGTTACACCTGTATGTCTaGCCCTCCTTTGCGGTCTCA | + |
Preference number: 5 (lower is better) Translates to: GRASVDQAFWQVWKVVRELHLYV*PSFAVS Trigger: TGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAA...CTCTCTCACAACCTTCCAAACCTGCCAGAAAGCTTGGTCCACAGAAGCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGCATGGCTTTCCAGGATGCGGGCACTaGTATGGTCTGTCGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: GLLWVLYIVPIYTDTHGFPGCGH*YGLSPV Trigger: CACAGGCGACAGACCATACAAGTGCCCGCATCCTGG...AAAGCCATGCGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | GAGATCGTCTTTGGATGCCACCAGAACAGTCCAGAATCTTGCAGTTGGCCTGGCTTACACCTGTATGTCTaGCCCTCCTTTGCGGTCTCA | + |
Preference number: 5 (lower is better) Translates to: EIVFGCHQNSPESCSWPGLHLYV*PSFAVS Trigger: TGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAA...GCCAGGCCAACTGCAAGATTCTGGACTGTTCTGGTGGCATCCAAAGACGATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | TGTGGAAGGGGGCTTCTCTGGGTTCTGTACATAGTTCCTATATACACGGACACGGCCATCAGCTGCTCTTaGATCTTGTTAATCAGGACC | + |
Preference number: 5 (lower is better) Translates to: CGRGLLWVLYIVPIYTDTAISCS*ILLIRT Trigger: GGTCCTGATTAACAAGATCAAAGAGCAGCTGATGGC...CGTGTCCGTGTATATAGGAACTATGTACAGAACCCAGAGAAGCCCCCTTCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | CAGGGTAGTAACATGCGGACAAAAGCTACAATACGGAGTATCAGACGACGCAAGATCTGCATCTCAGACTaGGTGAAAAAGGTGAGCGGG | + |
Preference number: 5 (lower is better) Translates to: QGSNMRTKATIRSIRRRKICISD*VKKVSG Trigger: CCCGCTCACCTTTTTCACCAAGTCTGAGATGCAGAT...CTTGCGTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS-3UTR CAA 90 bp | CCTCTGGTTCTCTGTATCCGTCTGTCCAGTCCTTTTAATTTCCCGTTCTTAGCAAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: PLVLCIRLSSPFNFPFLASCSLI*LIRTRL Trigger: CAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCT...TGCTAAGAACGGGAAATTAAAAGGACTGGACAGACGGATACAGAGAACCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CAA 90 bp | GGCTGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTGCAGCTaGGGCAGCGACATGACCGCCTGGCTGCTCTCGGCGGGCGCGGGA | + |
Preference number: 6 (lower is better) Translates to: GCGTDCGCSPGTCCS*GSDMTAWLLSAGAG Trigger: TCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 72 bp | CTCGCGTGCAGTGCCACGTCGGGCTGCGGCACGGACTaGGGGTGCAGCCCGGGCACCTGCTGCAGCTTGGGC | + |
Preference number: 6 (lower is better) Translates to: LACSATSGCGTD*GCSPGTCCSLG Trigger: GCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 72 bp | TGCAGTGCCACGTCGGGCTGCGGCACGGACTGCGGGTaGAGCCCGGGCACCTGCTGCAGCTTGGGCAGCGAC | + |
Preference number: 6 (lower is better) Translates to: CSATSGCGTDCG*SPGTCCSLGSD Trigger: GTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 72 bp | TGCGGCACGGACTGCGGGTGCAGCCCGGGCACCTGCTaGAGCTTGGGCAGCGACATGACCGCCTGGCTGCTC | + |
Preference number: 6 (lower is better) Translates to: CGTDCGCSPGTC*SLGSDMTAWLL Trigger: GAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCCCGGGCTGCACCCGCAGTCCGTGCCGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 72 bp | CCCAGACCTGTGACAGTACTGGTGGCCGGCCTCGCGTaGAGTGCCACGTCGGGCTGCGGCACGGACTGCGGG | + |
Preference number: 6 (lower is better) Translates to: PRPVTVLVAGLA*SATSGCGTDCG Trigger: CCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGTCTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS GCA 72 bp | ACCTGTGACAGTACTGGTGGCCGGCCTCGCGTGCAGTaGCACGTCGGGCTGCGGCACGGACTGCGGGTGCAG | + |
Preference number: 6 (lower is better) Translates to: TCDSTGGRPRVQ*HVGLRHGLRVQ Trigger: CTGCACCCGCAGTCCGTGCCGCAGCCCGACGTGGCACTGCACGCGAGGCCGGCCACCAGTACTGTCACAGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CCA 72 bp | GGCACCTGCTGCAGCTTGGGCAGCGACATGACCGCCTaGCTGCTCTCGGCGGGCGCGGGAGGGACTAGCAGT | + |
Preference number: 6 (lower is better) Translates to: GTCCSLGSDMTA*LLSAGAGGTSS Trigger: ACTGCTAGTCCCTCCCGCGCCCGCCGAGAGCAGCCAGGCGGTCATGTCGCTGCCCAAGCTGCAGCAGGTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS TCA 72 bp | TCGCACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTaGGTGATGGCTCACCAGGTGTTCCACCACTGTGTG | + |
Preference number: 6 (lower is better) Translates to: SHRDAGGLGPLG*VMAHQVFHHCV Trigger: CACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGTGCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CCA 72 bp | TCTTGCCCTCCTTTGCGGTCTCACCGGAGGCCAGGATaGGGTACGGGACAACAAGGACAGGGGGACCCCCTG | + |
Preference number: 6 (lower is better) Translates to: SCPPLRSHRRPG*GTGQQGQGDPL Trigger: CAGGGGGTCCCCCTGTCCTTGTTGTCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS TCA 72 bp | ACCGGGATGCCGGGGGACTCGGTCCTCTGGGGTGAGTaGTGGCTCACCAGGTGTTCCACCACTGTGTGTTTG | + |
Preference number: 6 (lower is better) Translates to: TGMPGDSVLWGE*WLTRCSTTVCL Trigger: CAAACACACAGTGGTGGAACACCTGGTGAGCCATCACTCACCCCAGAGGACCGAGTCCCCCGGCATCCCGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CAA 72 bp | GCGGGCAGACCTTACACCTGTATGTCTTGCCCTCCTTaGCGGTCTCACCGGAGGCCAGGATGGGGTACGGGA | + |
Preference number: 6 (lower is better) Translates to: AGRPYTCMSCPP*RSHRRPGWGTG Trigger: TCCCGTACCCCATCCTGGCCTCCGGTGAGACCGCAAAGGAGGGCAAGACATACAGGTGTAAGGTCTGCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CAA 72 bp | CTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCCATCCTAGAGGGTCCT | + |
Preference number: 6 (lower is better) Translates to: LGMVGGGGQKYG*LNRGSAILEGP Trigger: AGGACCCTCTAGGATGGCCGAACCTCGATTTAACAACCCGTACTTCTGGCCCCCTCCTCCCACCATGCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CAA 90 bp | TCCAGCTGGCTCGGCATGGTGGGAGGAGGGGGCCAGAAGTACGGGTaGTTAAATCGAGGTTCGGCCATCCTAGAGGGTCCTTTCCCACTT | + |
Preference number: 6 (lower is better) Translates to: SSWLGMVGGGGQKYG*LNRGSAILEGPFPL Trigger: AAGTGGGAAAGGACCCTCTAGGATGGCCGAACCTCGATTTAACAACCCGTACTTCTGGCCCCCTCCTCCCACCATGCCGAGCCAGCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |
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CDS CAA 72 bp | GGCCGGATCTTTTCAGCCATCAGCTGCTCTTTGATCTaGTTAATCAGGACCAGGTTGTCCAGCTGGCTCGGC | + |
Preference number: 6 (lower is better) Translates to: GRIFSAISCSLI*LIRTRLSSWLG Trigger: GCCGAGCCAGCTGGACAACCTGGTCCTGATTAACAAGATCAAAGAGCAGCTGATGGCTGAAAAGATCCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 ENSMUST00000170934.3 |
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CDS CCA 72 bp | AGTGATGGCTCACCAGGTGTTCCACCACTGTGTGTTTaGACATGTGCTTCATCAGGTAGGTCTCCGAGGTGT | + |
Preference number: 6 (lower is better) Translates to: SDGSPGVPPLCV*TCASSGRSPRC Trigger: ACACCTCGGAGACCTACCTGATGAAGCACATGTCCAAACACACAGTGGTGGAACACCTGGTGAGCCATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071108.14 ENSMUST00000106072.9 |