Pregenerated sensors for ZFP36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044786Ensembl transcript IDs: ENSMUST00000051241.7, ENSMUST00000209061.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCAAACATCTTAGGTACCCTAGGAACGGATCCACCCAAACACTaGATTTGCAAACTAGGGACCTGCCCCAGCCCAGCACCAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PSNILGTLGTDPPKH*ICKLGTCPSPAPGK Trigger: TTTCCCTGGTGCTGGGCTGGGGCAGGTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAGATGTTTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 90 bp | GGGACCTGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTaGAATGTCCAGAAGATGGGACTTATTAACTTAGAGGAGTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GTCPSPAPGKWVIAS*NVQKMGLINLEECP Trigger: GGGGCACTCCTCTAAGTTAATAAGTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCAGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 90 bp | ATAAAGGGCCCACTGGTTGGGGGAGAAGGGATTTGGCAATGGCTTTaGCTATTTGCTTTAGGAGGGAAATTTGAGCACCAGGATTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: IKGPLVGGEGIWQWL*LFALGGKFEHQDSQ Trigger: CTGAGAATCCTGGTGCTCAAATTTCCCTCCTAAAGCAAATAGCCAAAGCCATTGCCAAATCCCTTCTCCCCCAACCAGTGGGCCCTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 90 bp | CTGGGGTACCATAATAAGCTCCTATCTCAAAAACAACAGAAGACTTaGGGCCTGGAAGACCAACTGTCAACTGTCTCCCTCAAACATCTT | + |
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Preference number: 1 (lower is better) Translates to: LGYHNKLLSQKQQKT*GLEDQLSTVSLKHL Trigger: AAGATGTTTGAGGGAGACAGTTGACAGTTGGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCTTATTATGGTACCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 90 bp | ACCATAATAAGCTCCTATCTCAAAAACAACAGAAGACTTGGGGCCTaGAAGACCAACTGTCAACTGTCTCCCTCAAACATCTTAGGTACC | + |
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Preference number: 1 (lower is better) Translates to: TIISSYLKNNRRLGA*KTNCQLSPSNILGT Trigger: GGTACCTAAGATGTTTGAGGGAGACAGTTGACAGTTGGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCTTATTATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGAGGTCCCCACAGCAATaGGCAGTCCCTGCCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PAQHQGNGLLHLGMSRRWRSPQQ*AVPALS Trigger: AGAGAGGGCAGGGACTGCTCATTGCTGTGGGGACCT...CCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACTTCAGCCAGGAGACCAGAGTTaGAGAGGGGCTGGTGCATAC | + |
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Preference number: 2 (lower is better) Translates to: FEHQDSQERLRPPDTELQPGDQS*RGAGAY Trigger: GTATGCACCAGCCCCTCTGCAACTCTGGTCTCCTGG...CTGAAGTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGGGAGAAGGGATTTGGCAATGGCTTTGGCTATTTGCTTTAGGAGGGAAAAGGTCCCCACAGCAATaGGCAGTCCCTGCCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VGGEGIWQWLWLFALGGKRSPQQ*AVPALS Trigger: AGAGAGGGCAGGGACTGCTCATTGCTGTGGGGACCT...TTTCCCTCCTAAAGCAAATAGCCAAAGCCATTGCCAAATCCCTTCTCCCCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CAA 90 bp | AAACATCTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTaGCAAACTAGGGACCTGCCCCAGCCCAGCACCAGGGAAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: KHLRYPRNGSTQTLN*QTRDLPQPSTREMG Trigger: ACCCATTTCCCTGGTGCTGGGCTGGGGCAGGTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAGATGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAATGCAAACTAGGGACCTaGCCCAGCCCAGCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKCKLGT*PSPAPG Trigger: CCCTGGTGCTGGGCTGGGGCAGGTCCCTAGTTTGCA...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR GCA 90 bp | TATATTGAGTTCAAAGCCAGCCTGGGGTACCATAATAAGCTCCTATCTCAAAAATGCAAACTAGGGACCTaGCCCAGCCCAGCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YIEFKASLGYHNKLLSQKCKLGT*PSPAPG Trigger: CCCTGGTGCTGGGCTGGGGCAGGTCCCTAGTTTGCA...TTTTTGAGATAGGAGCTTATTATGGTACCCCAGGCTGGCTTTGAACTCAATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTTGCAAACTAGGGACCCAGCACCAGGGAAATaGGTTATTGCATCTTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LRYPRNGSTQTLNLQTRDPAPGK*VIASWN Trigger: ATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGG...GTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR GCA 90 bp | TATATTGAGTTCAAAGCCAGCCTGGGGTACCATAATAAGCTCCTATCTCAAAAAATTAACTTAGAGGAGTaGCCCAGGTCCCCACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: YIEFKASLGYHNKLLSQKINLEE*PRSPQQ Trigger: TTGCTGTGGGGACCTGGGGCACTCCTCTAAGTTAAT...TTTTTGAGATAGGAGCTTATTATGGTACCCCAGGCTGGCTTTGAACTCAATATA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR TCA 72 bp | GGTCCCCACAGCAATGAGCAGTCCCTGCCCTCTCTTTaGGATCTAGCTGATCCATACTGGGTAGGTAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GPHSNEQSLPSL*DLADPYWVGRH Trigger: GTGCCTACCTACCCAGTATGGATCAGCTAGATCTCAAAGAGAGGGCAGGGACTGCTCATTGCTGTGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR TCA 72 bp | GCAATGGCTTTGGCTATTTGCTTTAGGAGGGAAATTTaGGCACCAGGATTCTCAGGAGAGGCTTCGACCACC | + |
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Preference number: 3 (lower is better) Translates to: AMALAICFRREI*APGFSGEASTT Trigger: GGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCCCTCCTAAAGCAAATAGCCAAAGCCATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 72 bp | AAGGGCCCACTGGTTGGGGGAGAAGGGATTTGGCAATaGCTTTGGCTATTTGCTTTAGGAGGGAAATTTGAG | + |
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Preference number: 3 (lower is better) Translates to: KGPLVGGEGIWQ*LWLFALGGKFE Trigger: CTCAAATTTCCCTCCTAAAGCAAATAGCCAAAGCCATTGCCAAATCCCTTCTCCCCCAACCAGTGGGCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 72 bp | CCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTaGAATGTCCAGAAGATGGGACTTATTAACTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSPAPGKWVIAS*NVQKMGLINLE Trigger: CTCTAAGTTAATAAGTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 72 bp | AGCTCCTATCTCAAAAACAACAGAAGACTTGGGGCCTaGAAGACCAACTGTCAACTGTCTCCCTCAAACATC | + |
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Preference number: 3 (lower is better) Translates to: SSYLKNNRRLGA*KTNCQLSPSNI Trigger: GATGTTTGAGGGAGACAGTTGACAGTTGGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CCA 72 bp | CATAATAAGCTCCTATCTCAAAAACAACAGAAGACTTaGGGCCTGGAAGACCAACTGTCAACTGTCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HNKLLSQKQQKT*GLEDQLSTVSL Trigger: GAGGGAGACAGTTGACAGTTGGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCTTATTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAAATGGGTTATTGCATCTaGGAATGTCCAGAAGATGGG | + |
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Preference number: 3 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKMGYCI*ECPEDG Trigger: CCCATCTTCTGGACATTCCAAGATGCAATAACCCAT...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | GGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACCGAGCTTCTGCGGCCTaGGGGCAAGCCGGAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GNLSTRILRRGFDHRTLNRASAA*GQAGEA Trigger: AGCTTCTCCGGCTTGCCCTCAGGCCGCAGAAGCTCG...GTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | GGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACCGCAGCACATGGGGCTaGCCAGGGAGAGCTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GNLSTRILRRGFDHRTLNRSTWG*PGRARS Trigger: GGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCG...GTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | TGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGCAGTCAGGCGAGAGGTaGCCCCAGACGGGATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CPSPAPGKWVIASWNVQKQSGER*PQTGWS Trigger: ACTCCATCCCGTCTGGGGTCACCTCTCGCCTGACTG...CTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACTTCAGGGCTGCTGCCGCTGCTaGCGTAGTCATCAGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: FEHQDSQERLRPPDTELQGCCRC*RSHQDR Trigger: CCGATCCTGATGACTACGCCAGCAGCGGCAGCAGCC...CTGAAGTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGGGCTGCTGCCGCTGCTaGCGTAGTCATCAGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: CPSPAPGKWVIASWNVQKGCCRC*RSHQDR Trigger: CCGATCCTGATGACTACGCCAGCAGCGGCAGCAGCC...CTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGGACCAGTCAGGCGAGAGGTaGCCCCAGACGGGATGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AQHQGNGLLHLGMSRRWDQSGER*PQTGWS Trigger: ACTCCATCCCGTCTGGGGTCACCTCTCGCCTGACTG...GTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | GCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGAAGTTCACCCAGGCCGTaGGCAAACTGGCACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: APAQHQGNGLLHLGMSRRSSPRP*ANWHLA Trigger: GGCCAAGTGCCAGTTTGCTCACGGCCTGGGTGAACT...TCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | GGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACAGTTCACCCAGGCCGTaGGCAAACTGGCACTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GNLSTRILRRGFDHRTLNSSPRP*ANWHLA Trigger: GGCCAAGTGCCAGTTTGCTCACGGCCTGGGTGAACT...GTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR GCA 90 bp | TTAGGAGGGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACCCAGGCTGCTGCCGCTaGTGGCGTAGTCATCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LGGKFEHQDSQERLRPPDPGCCR*WRSHQD Trigger: ATCCTGATGACTACGCCAGCAGCGGCAGCAGCCTGG...GTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCCCTCCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGGGGTGGCGATTGGCTTaGCGAAGTTCACCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PAQHQGNGLLHLGMSRRWGWRLA*RSSPRP Trigger: CGGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCC...CCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGACTTTGTCGCAGCACATaGGGCTGGCCAGGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: APAQHQGNGLLHLGMSRRLCRST*GWPGRA Trigger: AGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAG...TCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | GGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACCTTTGTCGCAGCACATaGGGCTGGCCAGGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GNLSTRILRRGFDHRTLNLCRST*GWPGRA Trigger: AGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAG...GTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGAGGGCCAGAAAAGCCTaGAGGTGGCGGCGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CPSPAPGKWVIASWNVQKRARKA*RWRRAS Trigger: AGAAGCTCGCCGCCACCTCCAGGCTTTTCTGGCCCT...CTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGGACTCGGATCCCAGAGAGTaGGCAGATGGGCTCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: AQHQGNGLLHLGMSRRWDSDPRE*ADGLRA Trigger: GGCTCGGAGCCCATCTGCCCACTCTCTGGGATCCGA...GTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TTAGGAGGGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACGAGGGGCAACAGGCCTaGTTAGGGTCTCTTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LGGKFEHQDSQERLRPPDEGQQA*LGSLRV Trigger: GACTCGAAGAGACCCTAACCAGGCCTGTTGCCCCTC...GTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCCCTCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACTTCAGGAGGGGCAACAGGCCTaGTTAGGGTCTCTTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: FEHQDSQERLRPPDTELQEGQQA*LGSLRV Trigger: GACTCGAAGAGACCCTAACCAGGCCTGTTGCCCCTC...CTGAAGTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | TGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGGCAAGCCGGAGAAGCTaGTGCTTTGTCGCAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: CPSPAPGKWVIASWNVQKASRRS*CFVAAH Trigger: ATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGC...CTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | TTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACTTCAGGCAAGCCGGAGAAGCTaGTGCTTTGTCGCAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: FEHQDSQERLRPPDTELQASRRS*CFVAAH Trigger: ATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGC...CTGAAGTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGAACTTGGGGTGGCGATTaGCTTGGCGAAGTTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: APAQHQGNGLLHLGMSRRTWGGD*LGEVHP Trigger: TGGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGT...TCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | CTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTTGCAAACTAGGGACGAGCAAACTGGCACTTaGCCCCGTAGCGACAACGCC | + |
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Preference number: 4 (lower is better) Translates to: LRYPRNGSTQTLNLQTRDEQTGT*PRSDNA Trigger: GGCGTTGTCGCTACGGGGCCAAGTGCCAGTTTGCTC...GTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | ACCATAATAAGCTCCTATCTCAAAAACAACAGAAGACTTGGGGCCTGGAAGACCCGCAGCACATGGGGCTaGCCAGGGAGAGCTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TIISSYLKNNRRLGAWKTRSTWG*PGRARS Trigger: GGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCG...GGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCTTATTATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | CCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGGACTTATTAACCGAGCTTCTGCGGCCTaGGGGCAAGCCGGAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PGKWVIASWNVQKMGLINRASAA*GQAGEA Trigger: AGCTTCTCCGGCTTGCCCTCAGGCCGCAGAAGCTCG...GTTAATAAGTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGGTTCCGTTTTGTACTTaGGGTGGCGATTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PAQHQGNGLLHLGMSRRWVPFCT*GGDWLG Trigger: GCCAAGCCAATCGCCACCCCAAGTACAAAACGGAAC...CCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | ACCATAATAAGCTCCTATCTCAAAAACAACAGAAGACTTGGGGCCTGGAAGACCTCGGATCCCAGAGAGTaGGCAGATGGGCTCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: TIISSYLKNNRRLGAWKTSDPRE*ADGLRA Trigger: GGCTCGGAGCCCATCTGCCCACTCTCTGGGATCCGA...GGTCTTCCAGGCCCCAAGTCTTCTGTTGTTTTTGAGATAGGAGCTTATTATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | CTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTTGCAAACTAGGGACTCCTCGGTGGGGTTGTaGATGAAGTGGCATCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: LRYPRNGSTQTLNLQTRDSSVGL*MKWHRE Trigger: CTCTCGATGCCACTTCATCCACAACCCCACCGAGGA...GTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| 3UTR CAA 72 bp | GGACCTGCCCCAGCCCAGCACCAGGGAAATGGGTTATaGCATCTTGGAATGTCCAGAAGATGGGACTTATTA | + |
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Preference number: 4 (lower is better) Translates to: GPAPAQHQGNGL*HLGMSRRWDLL Trigger: TAATAAGTCCCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR GCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAACCAGGCTGCTGCCGCTaGTGGCGTAGTCATCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKPGCCR*WRSHQD Trigger: ATCCTGATGACTACGCCAGCAGCGGCAGCAGCCTGG...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAAGAGCAAACTGGCACTTaGCCCCGTAGCGACAACGCC | + |
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Preference number: 4 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKEQTGT*PRSDNA Trigger: GGCGTTGTCGCTACGGGGCCAAGTGCCAGTTTGCTC...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | TATATTGAGTTCAAAGCCAGCCTGGGGTACCATAATAAGCTCCTATCTCAAAAAGGGTGGCGATTGGCTTaGCGAAGTTCACCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: YIEFKASLGYHNKLLSQKGWRLA*RSSPRP Trigger: CGGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCC...TTTTTGAGATAGGAGCTTATTATGGTACCCCAGGCTGGCTTTGAACTCAATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR TCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAACGGTGGGGTTGTGGATaGAGTGGCATCGAGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKRWGCG*SGIESH Trigger: ATGGCTCTCGATGCCACTTCATCCACAACCCCACCG...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAATCCTCGGTGGGGTTGTaGATGAAGTGGCATCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKSSVGL*MKWHRE Trigger: CTCTCGATGCCACTTCATCCACAACCCCACCGAGGA...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CCA 90 bp | ACCTGTAACCCCAGAACTTGGAAAAGGCTAAGGCAGGATTATATTGAGTTCAAAGTTCCGTTTTGTACTTaGGGTGGCGATTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TCNPRTWKRLRQDYIEFKVPFCT*GGDWLG Trigger: GCCAAGCCAATCGCCACCCCAAGTACAAAACGGAAC...TTTGAACTCAATATAATCCTGCCTTAGCCTTTTCCAAGTTCTGGGGTTACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 90 bp | GCTGCTGGCGTAGTCATCAGGATCGGATCCCAGAGAGTGGGCAGATaGGCTCCGAGCCAGGCCACCCAAGGGCCCCCAGATGGTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AAGVVIRIGSQRVGR*APSQATQGPPDGAG Trigger: CCCAGCACCATCTGGGGGCCCTTGGGTGGCCTGGCTCGGAGCCCATCTGCCCACTCTCTGGGATCCGATCCTGATGACTACGCCAGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS TCA 90 bp | GGAAGGGCCAGAAAAGCCTGGAGGTGGCGGCGAGCTTCTGCGGCCTaGGGGCAAGCCGGAGAAGCTGATGCTTTGTCGCAGCACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: GRARKAWRWRRASAA*GQAGEADALSQHMG Trigger: CCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGCCCTCAGGCCGCAGAAGCTCGCCGCCACCTCCAGGCTTTTCTGGCCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 90 bp | CGGCCTGAGGGCAAGCCGGAGAAGCTGATGCTTTGTCGCAGCACATaGGGCTGGCCAGGGAGAGCTAGGTCCTCGGTGGGGTTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: RPEGKPEKLMLCRST*GWPGRARSSVGLWM Trigger: CATCCACAACCCCACCGAGGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGCCCTCAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 90 bp | GAGGGCAAGCCGGAGAAGCTGATGCTTTGTCGCAGCACATGGGGCTaGCCAGGGAGAGCTAGGTCCTCGGTGGGGTTGTGGATGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: EGKPEKLMLCRSTWG*PGRARSSVGLWMKW Trigger: CCACTTCATCCACAACCCCACCGAGGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 90 bp | GATTGGCTTGGCGAAGTTCACCCAGGCCGTGAGCAAACTGGCACTTaGCCCCGTAGCGACAACGCCCGCTTTCTGAGTAGGTCCGACAGA | + |
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Preference number: 5 (lower is better) Translates to: DWLGEVHPGREQTGT*PRSDNARFLSRSDR Trigger: TCTGTCGGACCTACTCAGAAAGCGGGCGTTGTCGCTACGGGGCCAAGTGCCAGTTTGCTCACGGCCTGGGTGAACTTCGCCAAGCCAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | GGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACACTGAACGGGGTGGCGATTGGCTaGGCGAAGTTCACCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GNLSTRILRRGFDHRTLNGVAIG*AKFTQA Trigger: GGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCCC...GTTCAGTGTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 90 bp | AGCGGCCCTGGAGGTAGAACTTGTGGCAGAGTTCCGTTTTGTACTTaGGGTGGCGATTGGCTTGGCGAAGTTCACCCAGGCCGTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SGPGGRTCGRVPFCT*GGDWLGEVHPGREQ Trigger: TTGCTCACGGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGTACAAAACGGAACTCTGCCACAAGTTCTACCTCCAGGGCCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | CTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTTGCAAACTAGGGACGGGGTGGCGATTGGCTaGGCGAAGTTCACCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LRYPRNGSTQTLNLQTRDGVAIG*AKFTQA Trigger: GGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCCC...GTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | GCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATACTTGGGGTGGCGATaGGCTTGGCGAAGTTCACCC | + |
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Preference number: 5 (lower is better) Translates to: APAQHQGNGLLHLGMSRRYLGWR*AWRSSP Trigger: GGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGTA...TCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGTACTTGGGGTGGCGATaGGCTTGGCGAAGTTCACCC | + |
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Preference number: 5 (lower is better) Translates to: CPSPAPGKWVIASWNVQKYLGWR*AWRSSP Trigger: GGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGTA...CTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCCAGCACCAGGGAAATGGGTTATTGCATCTTGGAATGTCCAGAAGATGGAGGTCCTCGGTGGGGTaGTGGATGAAGTGGCATCGA | + |
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Preference number: 5 (lower is better) Translates to: PAQHQGNGLLHLGMSRRWRSSVG*WMKWHR Trigger: TCGATGCCACTTCATCCACAACCCCACCGAGGACCT...CCATCTTCTGGACATTCCAAGATGCAATAACCCATTTCCCTGGTGCTGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | TTAGGAGGGAAATTTGAGCACCAGGATTCTCAGGAGAGGCTTCGACCACCGGACAGTTCCGTTTTGTACTaGGGGTGGCGATTGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LGGKFEHQDSQERLRPPDSSVLY*GWRLAW Trigger: CCAAGCCAATCGCCACCCCAAGTACAAAACGGAACT...GTCCGGTGGTCGAAGCCTCTCCTGAGAATCCTGGTGCTCAAATTTCCCTCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS-3UTR CAA 90 bp | CTTAGGTACCCTAGGAACGGATCCACCCAAACACTGAATTTGCAAACTAGGGACAGGTCCTCGGTGGGGTaGTGGATGAAGTGGCATCGA | + |
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Preference number: 5 (lower is better) Translates to: LRYPRNGSTQTLNLQTRDRSSVG*WMKWHR Trigger: TCGATGCCACTTCATCCACAACCCCACCGAGGACCT...GTCCCTAGTTTGCAAATTCAGTGTTTGGGTGGATCCGTTCCTAGGGTACCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 72 bp | GGCAAGCCGGAGAAGCTGATGCTTTGTCGCAGCACATaGGGCTGGCCAGGGAGAGCTAGGTCCTCGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GKPEKLMLCRST*GWPGRARSSVG Trigger: CCCCACCGAGGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 72 bp | CCGGAGAAGCTGATGCTTTGTCGCAGCACATGGGGCTaGCCAGGGAGAGCTAGGTCCTCGGTGGGGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PEKLMLCRSTWG*PGRARSSVGLW Trigger: CCACAACCCCACCGAGGACCTAGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 72 bp | GTAGTCATCAGGATCGGATCCCAGAGAGTGGGCAGATaGGCTCCGAGCCAGGCCACCCAAGGGCCCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VVIRIGSQRVGR*APSQATQGPPD Trigger: ATCTGGGGGCCCTTGGGTGGCCTGGCTCGGAGCCCATCTGCCCACTCTCTGGGATCCGATCCTGATGACTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS TCA 72 bp | AGAAAAGCCTGGAGGTGGCGGCGAGCTTCTGCGGCCTaGGGGCAAGCCGGAGAAGCTGATGCTTTGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RKAWRWRRASAA*GQAGEADALSQ Trigger: CTGCGACAAAGCATCAGCTTCTCCGGCTTGCCCTCAGGCCGCAGAAGCTCGCCGCCACCTCCAGGCTTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS TCA 72 bp | CTGGCACTTGGCCCCGTAGCGACAACGCCCGCTTTCTaGGTAGGTCCGACAGAGCTCGGTCTTGTATCGAGA | + |
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Preference number: 6 (lower is better) Translates to: LALGPVATTPAF*VGPTELGLVSR Trigger: TCTCGATACAAGACCGAGCTCTGTCGGACCTACTCAGAAAGCGGGCGTTGTCGCTACGGGGCCAAGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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| CDS CCA 72 bp | GGAGGTAGAACTTGTGGCAGAGTTCCGTTTTGTACTTaGGGTGGCGATTGGCTTGGCGAAGTTCACCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GGRTCGRVPFCT*GGDWLGEVHPG Trigger: GCCTGGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGTACAAAACGGAACTCTGCCACAAGTTCTACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051241.7 ENSMUST00000209061.2 |
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