RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP358 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047264

Ensembl transcript IDs: ENSMUST00000061508.8, ENSMUST00000207318.2, ENSMUST00000208423.2

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGCTCAAACCAGACCCGAGGCCCAGCCCAGCTGCTGCGGCCGCTaGAGCGGCGGCAGCAGCAGCAGCGGCGGCGGCTGCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WAQTRPEAQPSCCGR*SGGSSSSGGGCCSS
Trigger: GGAGCTGCAGCAGCCGCCGCCGCTGCTGCTGCTGCCGCCGCTGCAGCGGCCGCAGCAGCTGGGCTGGGCCTCGGGTCTGGTTTGAGCCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS GCA 90 bp CATCATAGATACTGGGCTCAAACCAGACCCGAGGCCCAGCCCAGCTaGTGCGGCCGCTGCAGCGGCGGCAGCAGCAGCAGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: HHRYWAQTRPEAQPS*CGRCSGGSSSSGGG
Trigger: GCCGCCGCCGCTGCTGCTGCTGCCGCCGCTGCAGCGGCCGCAGCAGCTGGGCTGGGCCTCGGGTCTGGTTTGAGCCCAGTATCTATGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS GCA 90 bp TGCGGCCGCTGCAGCGGCGGCAGCAGCAGCAGCGGCGGCGGCTGCTaGAGCTCCCTCATGCACACGCTTATGTTTGGTGAGGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: CGRCSGGSSSSGGGC*SSLMHTLMFGEAGG
Trigger: GCCTCCAGCCTCACCAAACATAAGCGTGTGCATGAGGGAGCTGCAGCAGCCGCCGCCGCTGCTGCTGCTGCCGCCGCTGCAGCGGCCGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS GCA 90 bp CTTTGGCACACACTGGGCACTTGTGGGGACGAGGGCCGCCGTGCGTaGGCAGGTGTTGGGCCAGCAACGAGCCATGACCGAAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LWHTLGTCGDEGRRA*AGVGPATSHDRRPC
Trigger: GCAAGGCCTTCGGTCATGGCTCGTTGCTGGCCCAACACCTGCGCACGCACGGCGGCCCTCGTCCCCACAAGTGCCCAGTGTGTGCCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 90 bp GCGACGGAAGGCTCGCCCACAATCAGGACAAGAGAACGGACGAGGTaGACTGGCAGGGGCAGGAAGCACCGCTGGACTGGTGGCCAAGAT +
Preference number: 5 (lower is better)
Translates to: ATEGSPTIRTRERTR*TGRGRKHRWTGGQD
Trigger: ATCTTGGCCACCAGTCCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCGTTCTCTTGTCCTGATTGTGGGCGAGCCTTCCGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS TCA 90 bp CAGGAAGCACCGCTGGACTGGTGGCCAAGATTTCGGGGGTGGCAGTaGGGCCAGAAGGAAGGGAATCCACATCTGGAGCAGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: QEAPLDWWPRFRGWQ*GQKEGNPHLEQQGW
Trigger: CCAGCCCTGCTGCTCCAGATGTGGATTCCCTTCCTTCTGGCCTCACTGCCACCCCCGAAATCTTGGCCACCAGTCCAGCGGTGCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 90 bp GGAAGGCTCGCCCACAATCAGGACAAGAGAACGGACGAGGTGGACTaGCAGGGGCAGGAAGCACCGCTGGACTGGTGGCCAAGATTTCGG +
Preference number: 5 (lower is better)
Translates to: GRLAHNQDKRTDEVD*QGQEAPLDWWPRFR
Trigger: CCGAAATCTTGGCCACCAGTCCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCGTTCTCTTGTCCTGATTGTGGGCGAGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS TCA 90 bp CACTTGGGACTTTCTCCAGTTGGAAGGGCTGGGCTGGAACTGTCGTaGGTCGGAGAGCAGGGGTCAGTTTGGGACTTGGGTTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: HLGLSPVGRAGLELS*VGEQGSVWDLGLGS
Trigger: TGACCCCAAACCCAAGTCCCAAACTGACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 90 bp CCTCCTTTACCCACTTGGGACTTTCTCCAGTTGGAAGGGCTGGGCTaGAACTGTCGTGAGTCGGAGAGCAGGGGTCAGTTTGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PPLPTWDFLQLEGLG*NCRESESRGQFGTW
Trigger: CCAAGTCCCAAACTGACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTGGGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 90 bp CCCTTCCTCCTTTACCCACTTGGGACTTTCTCCAGTTGGAAGGGCTaGGCTGGAACTGTCGTGAGTCGGAGAGCAGGGGTCAGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PFLLYPLGTFSSWKG*AGTVVSRRAGVSLG
Trigger: TCCCAAACTGACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTGGGTAAAGGAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS GCA 90 bp CCAGATTCCAGCACAGAAACAGCATCAGGACCCAGGAAAGAGATCTaGCCTGGCCTCATCATAGATACTGGGCTCAAACCAGACCCGAGG +
Preference number: 5 (lower is better)
Translates to: PDSSTETASGPRKEI*PGLIIDTGLKPDPR
Trigger: CCTCGGGTCTGGTTTGAGCCCAGTATCTATGATGAGGCCAGGGCAGATCTCTTTCCTGGGTCCTGATGCTGTTTCTGTGCTGGAATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 90 bp GTCGAAACTCGAAGACATGGGATCCAGATCTTGGGAATCCAAGTCTaGCTTCCCCAAGATGGATCGTGGAGCTTCGTCTGCTTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: VETRRHGIQILGIQV*LPQDGSWSFVCFRV
Trigger: GACCCTGAAGCAGACGAAGCTCCACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CCA 90 bp GGATCAGGATCGAGGTCGAAACTCGAAGACATGGGATCCAGATCTTaGGAATCCAAGTCTGGCTTCCCCAAGATGGATCGTGGAGCTTCG +
Preference number: 5 (lower is better)
Translates to: GSGSRSKLEDMGSRS*ESKSGFPKMDRGAS
Trigger: CGAAGCTCCACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGATCCTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CCA 90 bp GGCCAATCACGTCAGGATCAGGATCGAGGTCGAAACTCGAAGACATaGGATCCAGATCTTGGGAATCCAAGTCTGGCTTCCCCAAGATGG +
Preference number: 5 (lower is better)
Translates to: GQSRQDQDRGRNSKT*DPDLGNPSLASPRW
Trigger: CCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGATCCTGATCCTGACGTGATTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CCA 72 bp CGGACGAGGTGGACTGGCAGGGGCAGGAAGCACCGCTaGACTGGTGGCCAAGATTTCGGGGGTGGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: RTRWTGRGRKHR*TGGQDFGGGSE
Trigger: CTCACTGCCACCCCCGAAATCTTGGCCACCAGTCCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp GCCCACAATCAGGACAAGAGAACGGACGAGGTGGACTaGCAGGGGCAGGAAGCACCGCTGGACTGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: AHNQDKRTDEVD*QGQEAPLDWWP
Trigger: TGGCCACCAGTCCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCGTTCTCTTGTCCTGATTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp GGCTCGCCCACAATCAGGACAAGAGAACGGACGAGGTaGACTGGCAGGGGCAGGAAGCACCGCTGGACTGGT +
Preference number: 6 (lower is better)
Translates to: GSPTIRTRERTR*TGRGRKHRWTG
Trigger: ACCAGTCCAGCGGTGCTTCCTGCCCCTGCCAGTCCACCTCGTCCGTTCTCTTGTCCTGATTGTGGGCGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS TCA 72 bp GGATGCCACGATGCTGGGCCAGTGTGGCGCCATGGCTaGATGACTTGCCACAGTCGGGACAGCGGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: GCHDAGPVWRHG*MTCHSRDSGKA
Trigger: AGCCTTACCGCTGTCCCGACTGTGGCAAGTCATTCAGCCATGGCGCCACACTGGCCCAGCATCGTGGCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CAA 72 bp CCACATCTGGAGCAGCAGGGCTGGGGGTGTCATTGCTaGGGTCGAGAACTAGTGGCACCGGGCCAATCACGT +
Preference number: 6 (lower is better)
Translates to: PHLEQQGWGCHC*GRELVAPGQSR
Trigger: ACGTGATTGGCCCGGTGCCACTAGTTCTCGACCCAAGCAATGACACCCCCAGCCCTGCTGCTCCAGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS TCA 72 bp CTTTCTCCAGTTGGAAGGGCTGGGCTGGAACTGTCGTaGGTCGGAGAGCAGGGGTCAGTTTGGGACTTGGGT +
Preference number: 6 (lower is better)
Translates to: LSPVGRAGLELS*VGEQGSVWDLG
Trigger: ACCCAAGTCCCAAACTGACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS GCA 72 bp AATCCACATCTGGAGCAGCAGGGCTGGGGGTGTCATTaGTTGGGTCGAGAACTAGTGGCACCGGGCCAATCA +
Preference number: 6 (lower is better)
Translates to: NPHLEQQGWGCH*LGRELVAPGQS
Trigger: TGATTGGCCCGGTGCCACTAGTTCTCGACCCAAGCAATGACACCCCCAGCCCTGCTGCTCCAGATGTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CCA 72 bp CTTTACCCACTTGGGACTTTCTCCAGTTGGAAGGGCTaGGCTGGAACTGTCGTGAGTCGGAGAGCAGGGGTC +
Preference number: 6 (lower is better)
Translates to: LYPLGTFSSWKG*AGTVVSRRAGV
Trigger: GACCCCTGCTCTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTGGGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CAA 72 bp CCCCTTCCTCCTTTACCCACTTGGGACTTTCTCCAGTaGGAAGGGCTGGGCTGGAACTGTCGTGAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: PLPPLPTWDFLQ*EGLGWNCRESE
Trigger: CTCCGACTCACGACAGTTCCAGCCCAGCCCTTCCAACTGGAGAAAGTCCCAAGTGGGTAAAGGAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp CAGAAGGAAGGGAATCCACATCTGGAGCAGCAGGGCTaGGGGTGTCATTGCTTGGGTCGAGAACTAGTGGCA +
Preference number: 6 (lower is better)
Translates to: QKEGNPHLEQQG*GCHCLGRELVA
Trigger: TGCCACTAGTTCTCGACCCAAGCAATGACACCCCCAGCCCTGCTGCTCCAGATGTGGATTCCCTTCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CAA 72 bp GGGGACAAGATCGGGGTTAGGGCTGGGATCAGATTCTaGGTCAGGACTGGGTACCACATCAGGATCAGCAAC +
Preference number: 6 (lower is better)
Translates to: GDKIGVRAGIRF*VRTGYHIRISN
Trigger: GTTGCTGATCCTGATGTGGTACCCAGTCCTGACCAAGAATCTGATCCCAGCCCTAACCCCGATCTTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp CCAGATCTTGGGAATCCAAGTCTGGCTTCCCCAAGATaGATCGTGGAGCTTCGTCTGCTTCAGGGTCCAGAT +
Preference number: 6 (lower is better)
Translates to: PDLGNPSLASPR*IVELRLLQGPD
Trigger: ATCTGGACCCTGAAGCAGACGAAGCTCCACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CCA 72 bp GGGACAAGATCGGGGTTAGGGCTGGGATCAGATTCTTaGTCAGGACTGGGTACCACATCAGGATCAGCAACA +
Preference number: 6 (lower is better)
Translates to: GTRSGLGLGSDS*SGLGTTSGSAT
Trigger: TGTTGCTGATCCTGATGTGGTACCCAGTCCTGACCAAGAATCTGATCCCAGCCCTAACCCCGATCTTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp CGTCAGGATCAGGATCGAGGTCGAAACTCGAAGACATaGGATCCAGATCTTGGGAATCCAAGTCTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: RQDQDRGRNSKT*DPDLGNPSLAS
Trigger: GGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGATCCTGATCCTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CAA 90 bp AGGATCAGGATCGAGGTCGAAACTCGAAGACATGGGATCCAGATCTaGGGAATCCAAGTCTGGCTTCCCCAAGATGGATCGTGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: RIRIEVETRRHGIQI*GIQVWLPQDGSWSF
Trigger: GAAGCTCCACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGATCCTGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS TCA 72 bp CTTCTAAGCTGGCGTCTCCATCTTCTGAGACAGTGTTaGGGTCTTCTGGCTCTGGCTCAGGGCTTTCAGAAA +
Preference number: 6 (lower is better)
Translates to: LLSWRLHLLRQC*GLLALAQGFQK
Trigger: TTTCTGAAAGCCCTGAGCCAGAGCCAGAAGACCTCAACACTGTCTCAGAAGATGGAGACGCCAGCTTAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS GCA 72 bp AGCACAGAAACAGCATCAGGACCCAGGAAAGAGATCTaGCCTGGCCTCATCATAGATACTGGGCTCAAACCA +
Preference number: 6 (lower is better)
Translates to: STETASGPRKEI*PGLIIDTGLKP
Trigger: TGGTTTGAGCCCAGTATCTATGATGAGGCCAGGGCAGATCTCTTTCCTGGGTCCTGATGCTGTTTCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2
CDS CCA 72 bp TCGAGGTCGAAACTCGAAGACATGGGATCCAGATCTTaGGAATCCAAGTCTGGCTTCCCCAAGATGGATCGT +
Preference number: 6 (lower is better)
Translates to: SRSKLEDMGSRS*ESKSGFPKMDR
Trigger: ACGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CAA 72 bp TCTTCTAAGCTGGCGTCTCCATCTTCTGAGACAGTGTaGAGGTCTTCTGGCTCTGGCTCAGGGCTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: SSKLASPSSETV*RSSGSGSGLSE
Trigger: TTCTGAAAGCCCTGAGCCAGAGCCAGAAGACCTCAACACTGTCTCAGAAGATGGAGACGCCAGCTTAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS CAA 72 bp ATCGAGGTCGAAACTCGAAGACATGGGATCCAGATCTaGGGAATCCAAGTCTGGCTTCCCCAAGATGGATCG +
Preference number: 6 (lower is better)
Translates to: IEVETRRHGIQI*GIQVWLPQDGS
Trigger: CGATCCATCTTGGGGAAGCCAGACTTGGATTCCCAAGATCTGGATCCCATGTCTTCGAGTTTCGACCTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS TCA 72 bp AGGATCTTTGGGACTGGAGTCCAGGTCTTCTGGGTCTaGGTGAAGGTCTCCATAAAGGGGCCTAAGATTCTT +
Preference number: 6 (lower is better)
Translates to: RIFGTGVQVFWV*VKVSIKGPKIL
Trigger: AAGAATCTTAGGCCCCTTTATGGAGACCTTCACTCAGACCCAGAAGACCTGGACTCCAGTCCCAAAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000061508.8
ENSMUST00000207318.2
ENSMUST00000208423.2
CDS TCA 72 bp ACAAGATCGGGACTAGAGATAGATCCTGAGTGGGTCTaGAGGATGGGATTTTGGAGTGAACCCAGTACAGAA +
Preference number: 6 (lower is better)
Translates to: TRSGLEIDPEWV*RMGFWSEPSTE
Trigger: TTCTGTACTGGGTTCACTCCAAAATCCCATCCTTCAGACCCACTCAGGATCTATCTCTAGTCCCGATCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000061508.8
ENSMUST00000208423.2