Pregenerated sensors for ZFP354C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044807Ensembl transcript IDs: ENSMUST00000000632.7, ENSMUST00000109135.9
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACTATCCTCTCTGTGCACTTGCCTTCCCCTCTCACTGCAAACGTaGCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: ELSSLCTCLPLSLQT*HCSLLPGGLSPSGG Trigger: GCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAGGGGAAGGCAAGTGCACAGAGAGGATAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 90 bp | GGCCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTaGCTGCCAGATCTCAGGATGAAAGCAGATGTGTCTCTTGCGACT | + |
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Preference number: 1 (lower is better) Translates to: GLMRSYSGCCSGGDF*LPDLRMKADVSLAT Trigger: AGTCGCAAGAGACACATCTGCTTTCATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 90 bp | CCCTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTaGGTCCCTCTGGAGGCAAATGGCATTTGTGAATCAAACACTGGG | + |
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Preference number: 1 (lower is better) Translates to: PSHCKRATVHFFQEA*VPLEANGICESNTG Trigger: CCCAGTGTTTGATTCACAAATGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 90 bp | GTCCCTCTGGAGGCAAATGGCATTTGTGAATCAAACACTGGGCACTaGGCATGCTCACTAGGGACAAGAAGACACTCAGAGGCTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: VPLEANGICESNTGH*ACSLGTRRHSEAPF Trigger: GAAGGGAGCCTCTGAGTGTCTTCTTGTCCCTAGTGAGCATGCTCAGTGCCCAGTGTTTGATTCACAAATGCCATTTGCCTCCAGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR CCA 90 bp | GCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTaGAGGCAAATGGCATTTGTGAATCAAACACTGGGCACTGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: ANVPLFTSSRRPESL*RQMAFVNQTLGTEH Trigger: ATGCTCAGTGCCCAGTGTTTGATTCACAAATGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 90 bp | GGACTTCTGCCTGCCAGATCTCAGGATGAAAGCAGATGTGTCTCTTaGGACTCAGAGCTGTACTCTCGGGATGAGGAAATGTTCCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: GLLPARSQDESRCVS*DSELYSRDEEMFLN Trigger: ATTAAGGAACATTTCCTCATCCCGAGAGTACAGCTCTGAGTCGCAAGAGACACATCTGCTTTCATCCTGAGATCTGGCAGGCAGAAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 90 bp | ATGCTCGCTAACTGGTTTTGGCAGTATGTCATAAATAGTAAAATGTaGTTCTGCGGCCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: MLANWFWQYVINSKM*FCGLMRSYSGCCSG Trigger: TCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGGCCGCAGAAGCACATTTTACTATTTATGACATACTGCCAAAACCAGTTAGCGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR CCA 90 bp | CACCTTGCATGTGGCTGTCTCAGGCATCTTTTTGTTCCAACATATTaGCTATTTGAAAAGTACAACTTAATTATCATCTCCAATGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: HLACGCLRHLFVPTY*LFEKYNLIIISNVS Trigger: TGAGACATTGGAGATGATAATTAAGTTGTACTTTTCAAATAGCCAATATGTTGGAACAAAAAGATGCCTGAGACAGCCACATGCAAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | GTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGCAAATGGCATGGGAGAGCACCTCCTaGGCATGCACAAGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VPLFTSSRRPESLWRQMAWESTS*ACTRPW Trigger: CCAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCA...TGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGCAAACAAACCCTCTGTaGAGGCAGCCAGACATCACG | + |
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Preference number: 2 (lower is better) Translates to: GCRHSSVGEHLLSMHKALQTNPL*RQPDIT Trigger: CGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTG...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAAACAAACCCTCTGTGCAGGCAGCCAGACATCACGGCACACGCAATTATGATGGCTCATGCCTCTaGTCCCAGTACGTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CANKPSVQAARHHGTRNYDGSCL*SQYVGG Trigger: GCCTCCCACGTACTGGGATCAGAGGCATGAGCCATC...ATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGAGAACTATCCTCTCTGTaGACTTGCCTTCCCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PHEKLQWLLLRRGLLPARELSSL*TCLPLS Trigger: TGAGAGGGGAAGGCAAGTGCACAGAGAGGATAGTTC...TCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGAGACTACAGCTGGTCTaGAAAATTCCTACTTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: GCRHSSVGEHLLSMHKALRLQLV*KIPTCP Trigger: CGGACAAGTAGGAATTTTCCAGACCAGCTGTAGTCT...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTAAGAGGCCATGGATTTaGAGGAGAGTGGGGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSLQTCHCSLLPGGLSPSKRPWI*RRVGRS Trigger: ACTCCTCCCCACTCTCCTTCAAATCCATGGCCTCTT...AGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGAAGCAGATGTGTCTCTTaGGACTCAGAGCTGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: PHEKLQWLLLRRGLLPARSRCVS*DSELYS Trigger: AGAGTACAGCTCTGAGTCGCAAGAGACACATCTGCT...TCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATGGATTTGAAGGAGAGTaGGGAGGAGTGTATAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KLQWLLLRRGLLPARSQDGFEGE*GGVYRR Trigger: CCTCCTATACACTCCTCCCCACTCTCCTTCAAATCC...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGATATATGTGAGTGTGTaGATACAGCCATTTGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: GCRHSSVGEHLLSMHKALIYVSV*IQPFAY Trigger: ATAGGCAAATGGCTGTATGCACACACTCACATATAT...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGCAAATGGCAGCTCTTAGAAAGAGATaGCCCTCTCATGAAACAATG | + |
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Preference number: 2 (lower is better) Translates to: VPLFTSSRRPESLWRQMAALRKR*PSHETM Trigger: CATTGTTTCATGAGAGGGCCATCTCTTTCTAAGAGC...TGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGAGAAACAATGCTTATATaGAACAGTTACTCATGCGCT | + |
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Preference number: 2 (lower is better) Translates to: PHEKLQWLLLRRGLLPARETMLI*NSYSCA Trigger: AGCGCATGAGTAACTGTTGCATATAAGCATTGTTTC...TCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATTTAGGCACAATGCATTaGCCATTTGTGCAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLQWLLLRRGLLPARSQDLGTMH*PFVQTN Trigger: GTTTGTTTGCACAAATGGGCAATGCATTGTGCCTAA...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCATGAGAAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCTGATTCTAAAATaGAAACAGGTTCATAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PHEKLQWLLLRRGLLPARSLILK*KQVHSR Trigger: CCTGCTATGAACCTGTTTGCATTTTAGAATCAGAGA...TCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAGAAGACACTCAGAGGCTCCCTTCAAGTCTTATTTTTCCTGCAAATACGAGATGGCCCTCTCATaGAACAATGCTTATATGCAA | + |
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Preference number: 2 (lower is better) Translates to: GTRRHSEAPFKSYFSCKYEMALS*NNAYMQ Trigger: TTGCATATAAGCATTGTTTCATGAGAGGGCCATCTC...GTATTTGCAGGAAAAATAAGACTTGAAGGGAGCCTCTGAGTGTCTTCTTGTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCCACCATTTTAGGGACTaGGTCCCCACGATTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPHHFRD*VPTILH Trigger: GTGAAGAATCGTGGGGACTCAGTCCCTAAAATGGTG...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAGATGTGTCTCTTGCGACTCAGAGCTGTACTCTCGGGATGAGGAAATGTAAGTGTCTTAAAGTTTaGTCAAAGGATGCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: KADVSLATQSCTLGMRKCKCLKV*SKDAPS Trigger: TGAAGGTGCATCCTTTGATCAAACTTTAAGACACTT...ACATTTCCTCATCCCGAGAGTACAGCTCTGAGTCGCAAGAGACACATCTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCCTGATGCAGGAAGACTaGAAGTTCAAAACCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPLMQED*KFKTSL Trigger: CAGGCTGGTTTTGAACTTGCAGTCTTCCTGCATCAG...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR CAA 90 bp | GAGACTCTTGTTAACAATGGCCTTCTACAATACGTAATATATTGTTaGGATGACAGACTGCCCACCTGTCTGCTCAGACCAACTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: ETLVNNGLLQYVIYC*DDRLPTCLLRPTSI Trigger: TATAGAAGTTGGTCTGAGCAGACAGGTGGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAACAAGAGTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCGGATGTTTTAGCCAATaGCAACATATGTTAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPGCFSQ*QHMLEW Trigger: CCACTCTAACATATGTTGTCATTGGCTAAAACATCC...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAAATCCCCATTGTTAGGTaGCATGGCCATATATACATA | + |
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Preference number: 2 (lower is better) Translates to: LGLCKCNDVPINMKVPNEIPIVR*HGHIYI Trigger: TATGTATATATGGCCATGTCACCTAACAATGGGGAT...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCGTTATGTATCCACTTTaGCACACACATGTATGTACA | + |
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Preference number: 2 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPVMYPL*HTHVCT Trigger: TGTACATACATGTGTGTGCCAAAGTGGATACATAAC...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR CAA 90 bp | AAAAGAAGTCAATTAAGTGCTGAATGCCTGCTTAATTCTAATATTTaGCTCAGACAGAAGGGTCTGATTAATGCTCCTGGAGTAATTCTA | + |
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Preference number: 2 (lower is better) Translates to: KRSQLSAECLLNSNI*LRQKGLINAPGVIL Trigger: TAGAATTACTCCAGGAGCATTAATCAGACCCTTCTGTCTGAGCAAAATATTAGAATTAAGCAGGCATTCAGCACTTAATTGACTTCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAACCTCTCATGAAACAATaGTTATATGCAACAGTTACT | + |
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Preference number: 2 (lower is better) Translates to: LGLCKCNDVPINMKVPNEPLMKQ*LYATVT Trigger: AGTAACTGTTGCATATAAGCATTGTTTCATGAGAGG...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | ATGTGCTTCTGCGGCCTCATGAGAAGCTACAGTGGCTaGTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTC | + |
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Preference number: 3 (lower is better) Translates to: MCFCGLMRSYSG*CSGGDFCLPDL Trigger: GAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTTCTCATGAGGCCGCAGAAGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | TCTCTGTGCACTTGCCTTCCCCTCTCACTGCAAACGTaGCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SLCTCLPLSLQT*HCSLLPGGLSP Trigger: GGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAGGGGAAGGCAAGTGCACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATAAAGAGGCCATGGATTaGAAGGAGAGTGGGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: KLQWLLLRRGLLPARSQDKEAMD*KESGEE Trigger: CTCCTCCCCACTCTCCTTCAAATCCATGGCCTCTTT...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 72 bp | GCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATaGAAGCAGATGTGTCTCTTGCGACTCAGAGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: AQEGTSACQISG*KQMCLLRLRAV Trigger: TACAGCTCTGAGTCGCAAGAGACACATCTGCTTTCATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | AACTATCCTCTCTGTGCACTTGCCTTCCCCTCTCACTaGAAACGTGCCACTGTTCACTTCTTCCAGGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NYPLCALAFPSH*KRATVHFFQEA Trigger: GGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAGGGGAAGGCAAGTGCACAGAGAGGATAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR CCA 72 bp | CCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTaGAGGCAAATGGCATTTGTGAATCAAACACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PLFTSSRRPESL*RQMAFVNQTLG Trigger: GCCCAGTGTTTGATTCACAAATGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 72 bp | TGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTaGGTCCCTCTGGAGGCAAATGGCATTTGTGAATCA | + |
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Preference number: 3 (lower is better) Translates to: CKRATVHFFQEA*VPLEANGICES Trigger: TGATTCACAAATGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | CCTGCCAGATCTCAGGATGAAAGCAGATGTGTCTCTTaGGACTCAGAGCTGTACTCTCGGGATGAGGAAATG | + |
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Preference number: 3 (lower is better) Translates to: PARSQDESRCVS*DSELYSRDEEM Trigger: CATTTCCTCATCCCGAGAGTACAGCTCTGAGTCGCAAGAGACACATCTGCTTTCATCCTGAGATCTGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATTGTTATGTATCCACTTaGGCACACACATGTATGTAC | + |
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Preference number: 3 (lower is better) Translates to: KLQWLLLRRGLLPARSQDCYVST*AHTCMY Trigger: GTACATACATGTGTGTGCCAAAGTGGATACATAACA...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CAA 90 bp | CCTAAGGGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGAAAGTCCTAAACTCTTaGCATGTGTTATGTATCCAC | + |
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Preference number: 3 (lower is better) Translates to: PKGCRHSSVGEHLLSMHKKVLNS*HVLCIH Trigger: GTGGATACATAACACATGCAAAGAGTTTAGGACTTT...CTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCCCTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATCTTAATTCTAATATTTaGCTCAGACAGAAGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: KLQWLLLRRGLLPARSQDLNSNI*LRQKGL Trigger: CAGACCCTTCTGTCTGAGCAAAATATTAGAATTAAG...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 72 bp | GAGGCAAATGGCATTTGTGAATCAAACACTGGGCACTaGGCATGCTCACTAGGGACAAGAAGACACTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: EANGICESNTGH*ACSLGTRRHSE Trigger: CTCTGAGTGTCTTCTTGTCCCTAGTGAGCATGCTCAGTGCCCAGTGTTTGATTCACAAATGCCATTTGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | ACAATGCATTGCCCATTTGTGCAAACAAACCCTCTGTaGAGGCAGCCAGACATCACGGCACACGCAATTATA | + |
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Preference number: 3 (lower is better) Translates to: TMHCPFVQTNPL*RQPDITAHAII Trigger: TATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACAAATGGGCAATGCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR-3UTR CAA 90 bp | GGGACAAGAAGACACTCAGAGGCTCCCTTCAAGTCTTATTTTTCCTGCAAATACCTAACTGTATCCCCATaGTTAGGTGACATGGCCATA | + |
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Preference number: 3 (lower is better) Translates to: GTRRHSEAPFKSYFSCKYLTVSP*LGDMAI Trigger: TATGGCCATGTCACCTAACAATGGGGATACAGTTAG...GTATTTGCAGGAAAAATAAGACTTGAAGGGAGCCTCTGAGTGTCTTCTTGTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR TCA 72 bp | CAATGGCCTTCTACAATACGTAATATATTGTTTGGATaGCAGACTGCCCACCTGTCTGCTCAGACCAACTTC | + |
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Preference number: 3 (lower is better) Translates to: QWPSTIRNILFG*QTAHLSAQTNF Trigger: GAAGTTGGTCTGAGCAGACAGGTGGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | TTTTGGCAGTATGTCATAAATAGTAAAATGTGCTTCTaGGGCCTCATGAGAAGCTACAGTGGCTGCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: FWQYVINSKMCF*GLMRSYSGCCS Trigger: TGAGCAGCAGCCACTGTAGCTTCTCATGAGGCCGCAGAAGCACATTTTACTATTTATGACATACTGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| 3UTR GCA 72 bp | AACTGGTTTTGGCAGTATGTCATAAATAGTAAAATGTaGTTCTGCGGCCTCATGAGAAGCTACAGTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NWFWQYVINSKM*FCGLMRSYSGC Trigger: GCAGCCACTGTAGCTTCTCATGAGGCCGCAGAAGCACATTTTACTATTTATGACATACTGCCAAAACCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR TCA 72 bp | GGACTTCTCCCTATAACAGCTCACCATTTTAGGGACTaGGTCCCCACGATTCTTCACATTATTAACTACATC | + |
|
Preference number: 3 (lower is better) Translates to: GLLPITAHHFRD*VPTILHIINYI Trigger: GATGTAGTTAATAATGTGAAGAATCGTGGGGACTCAGTCCCTAAAATGGTGAGCTGTTATAGGGAGAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR GCA 72 bp | CTCTTTAACTATTATAGCACTTTAGGCACAATGCATTaGCCATTTGTGCAAACAAACCCTCTGTGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFNYYSTLGTMH*PFVQTNPLCRQ Trigger: CTGCCTGCACAGAGGGTTTGTTTGCACAAATGGGCAATGCATTGTGCCTAAAGTGCTATAATAGTTAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR TCA 72 bp | AAATTATGGTATGTTGATCACCTCAAGAGATCACATTaGTTGGCTGACCCAGACTATCTAGGGCTATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KLWYVDHLKRSH*LADPDYLGLCK Trigger: TTTGCATAGCCCTAGATAGTCTGGGTCAGCCAATCAATGTGATCTCTTGAGGTGATCAACATACCATAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTTACGTAATATATTGTTaGGATGACAGACTGCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFYVIYC*DDRLPT Trigger: GGTGGGCAGTCTGTCATCCAAACAATATATTACGTA...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR CCA 72 bp | TGTGGCTGTCTCAGGCATCTTTTTGTTCCAACATATTaGCTATTTGAAAAGTACAACTTAATTATCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CGCLRHLFVPTY*LFEKYNLIIIS Trigger: GGAGATGATAATTAAGTTGTACTTTTCAAATAGCCAATATGTTGGAACAAAAAGATGCCTGAGACAGCCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTACACGGCCACATCCCTaGAGGTCACAGGCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTCHCSLLPGGLSPSTRPHP*RSQALC Trigger: GCACAGAGCCTGTGACCTTCAGGGATGTGGCCGTGT...AGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGCAAATGGCAGTGTGGGTTCTCTGGTaGGCCAGGAGGGAGGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VPLFTSSRRPESLWRQMAVWVLW*ARREDL Trigger: TAGATCCTCCCTCCTGGCTCACCAGAGAACCCACAC...TGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GCTAGATCCTACACCAGAGCCCACTACAGATATAGGGGAGTCAGAAAGAAGTCGGGTGGTTTCCTTGGGTaGCTCTGCCCCTGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ARSYTRAHYRYRGVRKKSGGFLG*LCPWPM Trigger: CATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACC...CGACTTCTTTCTGACTCCCCTATATCTGTAGTGGGCTCTGGTGTAGGATCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATCCTGTGTGGATTCTCTaGTGTCTGTGGAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLQWLLLRRGLLPARSQDPVWIL*CLWSFA Trigger: AGCAAAGCTCCACAGACATCAGAGAATCCACACAGG...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAATGAATACTGGCTaGAGGCCTTTCCACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTCHCSLLPGGLSPSGMNTG*RPFHTG Trigger: ACCAGTGTGGAAAGGCCTTCAGCCAGTATTCATTCC...AGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | CTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTAAGGTTCTCCCACATTaGAAACACTGGCAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQTCHCSLLPGGLSPSKVLPH*KHWQSC Trigger: GCAGCTTTGCCAGTGTTTGCAATGTGGGAGAACCTT...AGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGATGAGGTTTTTGTCCTaGGTACATTTGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCRHSSVGEHLLSMHKALMRFLS*VHLKAS Trigger: AGAAGCTTTCAAATGTACCCAGGACAAAAACCTCAT...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGATCCTACACCAGAGCCCACTACAGATATAGGGGAGTCAGAAAGAAGTCGAGCTGCTCGCCAGTATaGAGTCTCTGGTGTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSYTRAHYRYRGVRKKSSCSPV*SLWCSA Trigger: AGCCGAACACCAGAGACTCCATACTGGCGAGCAGCT...CGACTTCTTTCTGACTCCCCTATATCTGTAGTGGGCTCTGGTGTAGGATCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CCTAAGGGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGTGTCCTGGGTACATTTaGAAGCTTCTCATTAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PKGCRHSSVGEHLLSMHKCPGYI*KLLIRS Trigger: TGATCTAATGAGAAGCTTTCAAATGTACCCAGGACA...CTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCCCTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GCTAGATCCTACACCAGAGCCCACTACAGATATAGGGGAGTCAGAAAGAAGTCGAATCACAGGAGGTATTaGAGCCTGAAACCCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSYTRAHYRYRGVRKKSNHRRY*SLKPQR Trigger: TCGCTGGGGTTTCAGGCTTCAATACCTCCTGTGATT...CGACTTCTTTCTGACTCCCCTATATCTGTAGTGGGCTCTGGTGTAGGATCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGCAAATGGCACTTTATCAGCCCATGTaGTGTCTCTTTAGTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLFTSSRRPESLWRQMALYQPM*CLFSKN Trigger: GTTCTTACTAAAGAGACATCACATGGGCTGATAAAG...TGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCAAACAAACCCTCTGTGCAGGCAGCCAGACATCACGGCACACGCAATTATTTGTGCTCTAGAAGATaGAGGCTTTGGGTGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: CANKPSVQAARHHGTRNYLCSRR*RLWVKP Trigger: GGGTTTCACCCAAAGCCTTCATCTTCTAGAGCACAA...ATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGATGTGTCTCTTGCGACTCAGAGCTGTACTCTCGGGATGAGGAAATGTGATGAAGGCTTTGGGTaGAACCCTTGCCACATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KADVSLATQSCTLGMRKCDEGFG*NPCHIH Trigger: GTGAATGTGGCAAGGGTTTCACCCAAAGCCTTCATC...ACATTTCCTCATCCCGAGAGTACAGCTCTGAGTCGCAAGAGACACATCTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCAAACAAACCCTCTGTGCAGGCAGCCAGACATCACGGCACACGCAATTATAGGATCACCCTCTTGTaGGACAAGTGCTTTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CANKPSVQAARHHGTRNYRITLL*DKCFTN Trigger: ATTAGTAAAGCACTTGTCTCACAAGAGGGTGATCCT...ATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCAAACAAACCCTCTGTGCAGGCAGCCAGACATCACGGCACACGCAATTATTTGTTTGGGTGGCAATaGTTCTATCTCTGGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CANKPSVQAARHHGTRNYLFGWQ*FYLWPN Trigger: ATTTGGCCAGAGATAGAAGCATTGCCACCCAAACAA...ATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGATCCTACACCAGAGCCCACTACAGATATAGGGGAGTCAGAAAGAAGTCGATGTCTGTGGAGCTTTaGTCTGCAGTTAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARSYTRAHYRYRGVRKKSMSVEL*SAVKGL Trigger: AAGGCCTTTAACTGCAGAGCAAAGCTCCACAGACAT...CGACTTCTTTCTGACTCCCCTATATCTGTAGTGGGCTCTGGTGTAGGATCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTGATCAAAGGATGCACCTTCAAGTTAGTCCCTGTGTCTACTCATATCAATAGGTCACAGGCTCTGTaGCTCGGGCAGCCAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIKGCTFKLVPVSTHINRSQAL*LGQPAN Trigger: ATTTGCTGGCTGCCCGAGGCACAGAGCCTGTGACCT...ATTGATATGAGTAGACACAGGGACTAACTTGAAGGTGCATCCTTTGATCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAATCTGCCCCTGGCCCATaGACTTTCTTTTCTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLCKCNDVPINMKVPNESAPGP*TFFSCS Trigger: GGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGA...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTCCAGTATGGAGTCTCTaGTGTTCGGCTAGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFPVWSL*CSARDG Trigger: TCCATCCCTAGCCGAACACCAGAGACTCCATACTGG...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR CAA 72 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTaGGATGACAGACTGCCCACCTGTCTGCTCAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VNNGLLQYVIYC*DDRLPTCLLRP Trigger: TGGTCTGAGCAGACAGGTGGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCGCCCTTTTTGCAGCTTaGCAATCACAGGAGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPALFAA*QSQEVL Trigger: CAATACCTCCTGTGATTGGCAAGCTGCAAAAAGGGC...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTTCCATGCAGGGATCTTaGCCTTTTTGCAGCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFSMQGS*PFCSLP Trigger: TGGCAAGCTGCAAAAAGGGCAAGATCCCTGCATGGA...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCGGGCTTCTCTTTCCATaGAGGGATCTTGCCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPGLLFP*RDLALF Trigger: AAAAAGGGCAAGATCCCTGCATGGAAAGAGAAGCCC...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAACCACATTGCAAACACTaGCAAAGCTGCTCGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGLCKCNDVPINMKVPNEPHCKH*QSCSPV Trigger: TACTGGCGAGCAGCTTTGCCAGTGTTTGCAATGTGG...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCAGTTTCTCCCCGGTATaGATCTTCCGATGTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPSFSPV*IFRCSL Trigger: CAATGAACATCGGAAGATTCATACCGGGGAGAAACT...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCATATGGAGTAAGGGATaGGCCATAGATAAAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPIWSKG*AIDKGC Trigger: ACACCCTTTATCTATGGCTCATCCCTTACTCCATAT...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTCTTTTCTTGCTCCTGTaGTATATCTCGGCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFLFLLL*YISALS Trigger: ACTGAGTGCCGAGATATAGCACAGGAGCAAGAAAAG...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR CAA 72 bp | GATCACACCTTGCATGTGGCTGTCTCAGGCATCTTTTaGTTCCAACATATTGGCTATTTGAAAAGTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: DHTLHVAVSGIF*FQHIGYLKSTT Trigger: AGTTGTACTTTTCAAATAGCCAATATGTTGGAACAAAAAGATGCCTGAGACAGCCACATGCAAGGTGTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAATCTTTCTCTGAAGTGTaGTACGTAGCAGGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLCKCNDVPINMKVPNESFSEV*YVAGTL Trigger: AAGTGTTCCTGCTACGTATCACACTTCAGAGAAAGA...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTTGCACTTTCTTTTCTTaGTCCTGTGCTATATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFCTFFS*SCAISR Trigger: CCGAGATATAGCACAGGAGCAAGAAAAGAAAGTGCA...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCTATGCAAATGCAATGATGTTCCTATAAACATGAAAGTGCCTAATGAAATGCCGATAAAGGTTTaGTTTACAGCCAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLCKCNDVPINMKVPNEMPIKV*FTAKGF Trigger: AAAGCCTTTGGCTGTAAATCAAACCTTTATCGGCAT...TTCATTAGGCACTTTCATGTTTATAGGAACATCATTGCATTTGCATAGCCCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTGTGTCTACAAAGGTTTaGCCTGTAACTATAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFVSTKV*PVTIGF Trigger: AAAGCCTATAGTTACAGGTCAAACCTTTGTAGACAC...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTCCTTTCAGAAATTTCTaGTATGGAGTAAGGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFPFRNF*YGVRDE Trigger: CTCATCCCTTACTCCATATCAGAAATTTCTGAAAGG...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTTTGAAGGAGGAATACTaGTTGAAAGTCTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFLKEEY*LKVFPH Trigger: ATGTGGGAAGACTTTCAACCAGTATTCCTCCTTCAA...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR CAA 72 bp | TACGAATTTTTAACATTGTTTGTAATAGTCCTTAAATaGCTGATGTCAGCATTCTTTGTGCATCCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YEFLTLFVIVLK*LMSAFFVHPLS Trigger: GGACAGTGGATGCACAAAGAATGCTGACATCAGCAATTTAAGGACTATTACAAACAATGTTAAAAATTCGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| 3UTR CAA 72 bp | GGTGATGGTGACAAACTACATTACCAGCTTACTCATTaGCTATACTATACTTTTATCCTTAGAGTATACACA | + |
|
Preference number: 4 (lower is better) Translates to: GDGDKLHYQLTH*LYYTFILRVYT Trigger: TGTGTATACTCTAAGGATAAAAGTATAGTATAGCAAATGAGTAAGCTGGTAATGTAGTTTGTCACCATCACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS CCA 90 bp | CCGGCTCGAAGCCCGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTTaGGTGACTCTGCCCCTGGCCCATGCACTTTCTTTTCTTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PARSPWEFRLHWWFP*VTLPLAHALSFLAP Trigger: AGGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTTCGAGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGGGGATCTTGCCCTTTTaGCAGCTTGCCAATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCRHSSVGEHLLSMHKALGILPF*QLANHR Trigger: CCTGTGATTGGCAAGCTGCAAAAAGGGCAAGATCCC...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS TCA 90 bp | CTCGAAGCCCGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTTGGGTaGCTCTGCCCCTGGCCCATGCACTTTCTTTTCTTGCTCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEARGSSVFTGGFLG*LCPWPMHFLFLLLC Trigger: GCACAGGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTTCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
||
| CDS-3UTR CAA 90 bp | CTCTCACTGCAAACGTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTTCACTGGTGGTTTCCTaGGGTGACTCTGCCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQTCHCSLLPGGLSPSSLVVS*GDSAPG Trigger: GCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGA...AGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCACGTTTGCAGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
||
| CDS-3UTR CAA 90 bp | GTGCCACTGTTCACTTCTTCCAGGAGGCCTGAGTCCCTCTGGAGGCAAATGGCACAATCACAGGAGGTATaGAAGCCTGAAACCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VPLFTSSRRPESLWRQMAQSQEV*KPETPA Trigger: CGCTGGGGTTTCAGGCTTCAATACCTCCTGTGATTG...TGCCATTTGCCTCCAGAGGGACTCAGGCCTCCTGGAAGAAGTGAACAGTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS GCA 90 bp | CCGTCTTCACTGGTGGTTTCCTTGGGTGACTCTGCCCCTGGCCCATaGACTTTCTTTTCTTGCTCCTGTGCTATATCTCGGCACTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PSSLVVSLGDSAPGP*TFFSCSCAISRHSV Trigger: AACTGAGTGCCGAGATATAGCACAGGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGACACAGCTCAGTGGGAGAGCACCTCCTGAGCATGCACAAGGCCCTGTTAAGGTGGACTTTTTaGTGTCTACAAAGGTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: GCRHSSVGEHLLSMHKALLRWTF*CLQRFD Trigger: GTCAAACCTTTGTAGACACAAAAAAGTCCACCTTAA...CAGGGCCTTGTGCATGCTCAGGAGGTGCTCTCCCACTGAGCTGTGTCTGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | AAGCTACAGTGGCTGCTGCTCAGGAGGGGACTTCTGCCTGCCAGATCTCAGGATTGTGTCTACAAAGGTTaGACCTGTAACTATAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: KLQWLLLRRGLLPARSQDCVYKG*TCNYRL Trigger: AAGCCTATAGTTACAGGTCAAACCTTTGTAGACACA...ATCCTGAGATCTGGCAGGCAGAAGTCCCCTCCTGAGCAGCAGCCACTGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS GCA 90 bp | AAATCTCGAAATCTAGGCAGGTGTCTTCAGGGGCTTCTCTTTCCATaGAGGGATCTTGCCCTTTTTGCAGCTTGCCAATCACAGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: KSRNLGRCLQGLLFP*RDLALFAACQSQEV Trigger: TACCTCCTGTGATTGGCAAGCTGCAAAAAGGGCAAGATCCCTGCATGGAAAGAGAAGCCCCTGAAGACACCTGCCTAGATTTCGAGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | TGTGCAAACAAACCCTCTGTGCAGGCAGCCAGACATCACGGCACACGCAATTATATCTTCCGATGTTCATaGAAGGAGGAATACTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: CANKPSVQAARHHGTRNYIFRCS*KEEYWL Trigger: CAACCAGTATTCCTCCTTCAATGAACATCGGAAGAT...ATAATTGCGTGTGCCGTGATGTCTGGCTGCCTGCACAGAGGGTTTGTTTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | GCTAGATCCTACACCAGAGCCCACTACAGATATAGGGGAGTCAGAAAGAAGTCGATGCACTTTCTTTTCTaGCTCCTGTGCTATATCTCG | + |
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Preference number: 5 (lower is better) Translates to: ARSYTRAHYRYRGVRKKSMHFLF*LLCYIS Trigger: CGAGATATAGCACAGGAGCAAGAAAAGAAAGTGCAT...CGACTTCTTTCTGACTCCCCTATATCTGTAGTGGGCTCTGGTGTAGGATCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS TCA 90 bp | AGTGTGATACGTAGCAGGAACACTTTCTGTAGGATCACCCTCTTGTaGGACAAGTGCTTTACTAATGAACAAGGGTTTCTCCGGCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SVIRSRNTFCRITLL*DKCFTNEQGFLRLE Trigger: TTCGAGCCGGAGAAACCCTTGTTCATTAGTAAAGCACTTGTCTCACAAGAGGGTGATCCTACAGAAAGTGTTCCTGCTACGTATCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS TCA 90 bp | TTTCCAGTAAACACACTTAGTGGATCCATTCTTTATCAGCCCATGTaGTGTCTCTTTAGTAAGAACATCTTGTTTGGGTGGCAATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FPVNTLSGSILYQPM*CLFSKNILFGWQCF Trigger: GAAGCATTGCCACCCAAACAAGATGTTCTTACTAAAGAGACATCACATGGGCTGATAAAGAATGGATCCACTAAGTGTGTTTACTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | AGTTTGATCAAAGGATGCACCTTCAAGTTAGTCCCTGTGTCTACTCATATCAATGCAGACATGAGGTTTTaGTCCTGGGTACATTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLIKGCTFKLVPVSTHINADMRF*SWVHLK Trigger: TTTCAAATGTACCCAGGACAAAAACCTCATGTCTGC...ATTGATATGAGTAGACACAGGGACTAACTTGAAGGTGCATCCTTTGATCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | GTTAACAATGGCCTTCTACAATACGTAATATATTGTTTGGATGACAGACTGCCCTTTAGTAAGAACATCTaGTTTGGGTGGCAATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VNNGLLQYVIYCLDDRLPFSKNI*FGWQCF Trigger: GAAGCATTGCCACCCAAACAAGATGTTCTTACTAAA...GGGCAGTCTGTCATCCAAACAATATATTACGTATTGTAGAAGGCCATTGTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS-3UTR CAA 90 bp | CAGACAAGTTTAAGGGGTGATCACAATTCAACAGTCACTGATCAGTTTCAATTTGATGCCGATAAAGGTTaGATTTACAGCCAAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QTSLRGDHNSTVTDQFQFDADKG*IYSQRL Trigger: AAGCCTTTGGCTGTAAATCAAACCTTTATCGGCATC...AAATTGAAACTGATCAGTGACTGTTGAATTGTGATCACCCCTTAAACTTGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109135.9 |
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| CDS CCA 72 bp | CCGGCTCGAAGCCCGTGGGAGTTCCGTCTTCACTGGTaGTTTCCTTGGGTGACTCTGCCCCTGGCCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: PARSPWEFRLHW*FPWVTLPLAHA Trigger: TGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTTCGAGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CCA 72 bp | TCTCCGGCTCGAAGCCCGTGGGAGTTCCGTCTTCACTaGTGGTTTCCTTGGGTGACTCTGCCCCTGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SPARSPWEFRLH*WFPWVTLPLAH Trigger: ATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTTCGAGCCGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CAA 90 bp | TCCGGCTCGAAGCCCGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTaGGGTGACTCTGCCCCTGGCCCATGCACTTTCTTTTCTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGSKPVGVPSSLVVS*GDSAPGPCTFFSCS Trigger: GGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTTCGAGCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CCA 72 bp | AGCCCGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTTaGGTGACTCTGCCCCTGGCCCATGCACTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPWEFRLHWWFP*VTLPLAHALSF Trigger: AAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CAA 72 bp | AAGCCCGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTaGGGTGACTCTGCCCCTGGCCCATGCACTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: KPVGVPSSLVVS*GDSAPGPCTFF Trigger: AAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS TCA 72 bp | CGTGGGAGTTCCGTCTTCACTGGTGGTTTCCTTGGGTaGCTCTGCCCCTGGCCCATGCACTTTCTTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RGSSVFTGGFLG*LCPWPMHFLFL Trigger: CAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAGTGAAGACGGAACTCCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS GCA 72 bp | CTGGTGGTTTCCTTGGGTGACTCTGCCCCTGGCCCATaGACTTTCTTTTCTTGCTCCTGTGCTATATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LVVSLGDSAPGP*TFFSCSCAISR Trigger: CCGAGATATAGCACAGGAGCAAGAAAAGAAAGTGCATGGGCCAGGGGCAGAGTCACCCAAGGAAACCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS GCA 72 bp | CTCTTTCCATGCAGGGATCTTGCCCTTTTTGCAGCTTaGCAATCACAGGAGGTATTGAAGCCTGAAACCCCA | + |
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Preference number: 6 (lower is better) Translates to: LFPCRDLALFAA*QSQEVLKPETP Trigger: TGGGGTTTCAGGCTTCAATACCTCCTGTGATTGGCAAGCTGCAAAAAGGGCAAGATCCCTGCATGGAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS GCA 72 bp | GTGTCTTCAGGGGCTTCTCTTTCCATGCAGGGATCTTaGCCTTTTTGCAGCTTGCCAATCACAGGAGGTATT | + |
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Preference number: 6 (lower is better) Translates to: VSSGASLSMQGS*PFCSLPITGGI Trigger: AATACCTCCTGTGATTGGCAAGCTGCAAAAAGGGCAAGATCCCTGCATGGAAAGAGAAGCCCCTGAAGACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CAA 72 bp | GATAAGGGTAGACACACGTGTAAAGGTTCTCCCACATaGCAAACACTGGCAAAGCTGCTCGCCAGTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: DKGRHTCKGSPT*QTLAKLLASME Trigger: CTCCATACTGGCGAGCAGCTTTGCCAGTGTTTGCAATGTGGGAGAACCTTTACACGTGTGTCTACCCTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS TCA 72 bp | CGTAGCAGGAACACTTTCTGTAGGATCACCCTCTTGTaGGACAAGTGCTTTACTAATGAACAAGGGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: RSRNTFCRITLL*DKCFTNEQGFL Trigger: GAGAAACCCTTGTTCATTAGTAAAGCACTTGTCTCACAAGAGGGTGATCCTACAGAAAGTGTTCCTGCTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS CAA 72 bp | AGCCCATGTGATGTCTCTTTAGTAAGAACATCTTGTTaGGGTGGCAATGCTTCTATCTCTGGCCAAATCTCG | + |
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Preference number: 6 (lower is better) Translates to: SPCDVSLVRTSC*GGNASISGQIS Trigger: CGAGATTTGGCCAGAGATAGAAGCATTGCCACCCAAACAAGATGTTCTTACTAAAGAGACATCACATGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS TCA 72 bp | AGATCAAAATCCTGTGGTAAATCTTTCTCTGAAGTGTaGTACGTAGCAGGAACACTTTCTGTAGGATCACCC | + |
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Preference number: 6 (lower is better) Translates to: RSKSCGKSFSEV*YVAGTLSVGSP Trigger: GGGTGATCCTACAGAAAGTGTTCCTGCTACGTATCACACTTCAGAGAAAGATTTACCACAGGATTTTGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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| CDS TCA 72 bp | AACACACTTAGTGGATCCATTCTTTATCAGCCCATGTaGTGTCTCTTTAGTAAGAACATCTTGTTTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: NTLSGSILYQPM*CLFSKNILFGW Trigger: CCACCCAAACAAGATGTTCTTACTAAAGAGACATCACATGGGCTGATAAAGAATGGATCCACTAAGTGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000632.7 ENSMUST00000109135.9 |
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