Pregenerated sensors for ZFP352 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070902Ensembl transcript IDs: ENSMUST00000080541.5, ENSMUST00000107129.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCAAAGTAGGAAAGGAGCTAAAAGGGAGACAGATCTGATTGGATaGCAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LQSRKGAKRETDLIG*QNHFSANPRIQGCK Trigger: CTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTTTTAGCTCCTTTCCTACTTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| 3UTR TCA 72 bp | CCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCTaGCCCCAGCAGCCTGCTGACCCAGCAGCAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PRIQGCKPKSQV*PQQPADPAAAG Trigger: CCCTGCTGCTGCTGGGTCAGCAGGCTGCTGGGGTCAGACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| 3UTR TCA 72 bp | TGCAAAGTAGGAAAGGAGCTAAAAGGGAGACAGATCTaGTTGGATGACAGAACCATTTCAGTGCAAACCCCA | + |
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Preference number: 3 (lower is better) Translates to: CKVGKELKGRQI*LDDRTISVQTP Trigger: TGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTTTTAGCTCCTTTCCTACTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGGGCGTGACCCACATTTaGGTCCTGGCCAGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: DRSDWMTEPFQCKPQDPRGVTHI*VLASMA Trigger: AGCCATGCTGGCCAGGACCCAAATGTGGGTCACGCC...CCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCAGCAGCAGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTTCTGGATGCTGTCTCTaGACTAAACTGGAAGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PSSSRAQPFLLNPSSAHSSGCCL*TKLEAE Trigger: TTCGGCTTCCAGTTTAGTCCAGAGACAGCATCCAGA...AGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCTGCTGCTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCAGCAGCAGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTTCAAAGGTAACCCTCTaGTTCTCACACATGGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PSSSRAQPFLLNPSSAHSSKVTL*FSHMAV Trigger: TACAGCCATGTGTGAGAATCAGAGGGTTACCTTTGA...AGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCTGCTGCTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTACTAGGGTCCTTCTGTaGCACAGGGCTCTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSTRVLL*HRALGL Trigger: AAGACCCAGAGCCCTGTGTCACAGAAGGACCCTAGT...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | AGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGAGCCAGGTTGTCTTCTaGACTGGGTCTTGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RAQPFLLNPSSAHSGQIRSQVVF*TGSCPL Trigger: AAGAGGACAAGACCCAGTGCAGAAGACAACCTGGCT...CCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTTTGCAGGGTCCTGGCTaGGAAGCACCTGTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSLQGPG*EAPVFS Trigger: AGAAAACACAGGTGCTTCCCAGCCAGGACCCTGCAA...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTTGTATTGCAGGGTCCTaGCTGGGAAGCACCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSCIAGS*LGSTCV Trigger: AACACAGGTGCTTCCCAGCCAGGACCCTGCAATACA...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCAGGGCTCTGGGTCTTaGAGTCTAACTTCATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSQGSGS*SLTSSL Trigger: CAGAGATGAAGTTAGACTTCAAGACCCAGAGCCCTG...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTTCCTGGGTATGCTGTTaGGTTCTGAGTACAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSSWVCC*VLSTGC Trigger: ACAACCTGTACTCAGAACTCAACAGCATACCCAGGA...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAGTTAAAATCAGCTGCAAAGTAGGAAAGGAGCTAAAAGGGAGACAGATCGGGAAGGCTGTGTATTaGAGGGTCCTGGCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EAVKISCKVGKELKGRQIGKAVY*RVLAGK Trigger: CTTCCCAGCCAGGACCCTGCAATACACAGCCTTCCC...GATCTGTCTCCCTTTTAGCTCCTTTCCTACTTTGCAGCTGATTTTAACTGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACTGAGAAAAGCTGGCTaGACTCCACAGGGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTLRKAG*TPQGKA Trigger: AGCCTTCCCCTGTGGAGTCCAGCCAGCTTTTCTCAG...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATGGGTCTGGCTACAACTaGGTGCTGTCATCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDGSGYN*VLSSDS Trigger: AGAGTCAGATGACAGCACCCAGTTGTAGCCAGACCC...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCAGCATCTCTGAGCTCTaGCCTGAGAAAAGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFSISEL*PEKSWL Trigger: CAGCCAGCTTTTCTCAGGTCAGAGCTCAGAGATGCT...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTATTGGACTTGTCACCTaGGGATTCACAATCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSIGLVT*GFTIKS Trigger: GGATTTGATTGTGAATCCTCAGGTGACAAGTCCAAT...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATAGGTTGTCTCCTGTGTaGTACAGGATGCAGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDRLSPV*YRMQIP Trigger: TGGAATCTGCATCCTGTAGCACACAGGAGACAACCT...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCAAAATGGAAACCAATaGCTTTTCCTGGGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSQNGNQ*LFLGML Trigger: CAGCATACCCAGGAAAAGCCATTGGTTTCCATTTTG...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACATGGCTGTATTTTaGGTCAAGAGAGTCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: DDRTISVQTPGSKAASLSHMAVF*VKRVLS Trigger: TGACAAGACTCTCTTGACCCAAAATACAGCCATGTG...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | AACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCAGCCTGGTATCCATTTaGCAATATCACCTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: NHFSANPRIQGCKPKSQVSLVSI*QYHLIS Trigger: GGAAATCAGGTGATATTGCCAAATGGATACCAGGCT...GACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACAAGGCTGGCCACCAATTaGACTTGTCACCTGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTRLATN*TCHLRI Trigger: AATCCTCAGGTGACAAGTCCAATTGGTGGCCAGCCT...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATTATGCTGTTGAGTTCTaGGTACAGGTTGTCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDYAVEF*VQVVSC Trigger: ACAGGAGACAACCTGTACTCAGAACTCAACAGCATA...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCCTTGAGGTTTGTGTCTaGAAGTCAGAGAGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFLEVCV*KSERGW Trigger: CCAGCCTCTCTCTGACTTTCAGACACAAACCTCAAG...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCTGTATGGTAAAGACCTaGAGGAGATATTTTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NHFSANPRIQGCKPKSQVCMVKT*RRYFLL Trigger: GAGCAGAAAATATCTCCTGCAGGTCTTTACCATACA...GACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | TCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAACCCACATATGGAGCTTaGAAACTAAATGAAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SDWMTEPFQCKPQDPRLQPTYGA*KLNEVT Trigger: GGTGACTTCATTTAGTTTGCAAGCTCCATATGTGGG...TTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCTTTGCAGACATTCTaGCCACTGAAGGATTTCATT | + |
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Preference number: 4 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDPLQTF*PLKDFI Trigger: AATGAAATCCTTCAGTGGTCAGAATGTCTGCAAAGG...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | TCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAACTAAATGAAGTCACCTaGGGATCAAGGCTTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SDWMTEPFQCKPQDPRLQLNEVT*GSRLSL Trigger: TAAAGAAAGCCTTGATCCTCAGGTGACTTCATTTAG...TTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATAACTTCATCTCTGGATaGTGTCTCTGGACTAAACTG | + |
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Preference number: 4 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDNFISG*CLWTKL Trigger: CAGTTTAGTCCAGAGACAGCATCCAGAGATGAAGTT...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCTGCAGTGGTGGGTTGTaGTTGAGCATGTTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFCSGGL*LSMFLL Trigger: GAGAAGAAACATGCTCAAGCACAACCCACCACTGCA...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAGTTAAAATCAGCTGCAAAGTAGGAAAGGAGCTAAAAGGGAGACAGATCTCAGCAGACACAACTTaGTGGTTCCAAGAAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: EAVKISCKVGKELKGRQISADTT*WFQEVF Trigger: GAACACTTCTTGGAACCAGCAAGTTGTGTCTGCTGA...GATCTGTCTCCCTTTTAGCTCCTTTCCTACTTTGCAGCTGATTTTAACTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACAAGCTGTATCAAAACTTaGGGTTTGTGTCTGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTSCIKT*GLCLKV Trigger: GACTTTCAGACACAAACCTCAAGTTTTGATACAGCT...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCAGCTTGCAAACTAAATaGAGTCACCTGAGGATCAAG | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFSLQTK*SHLRIK Trigger: CTTGATCCTCAGGTGACTTCATTTAGTTTGCAAGCT...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCTCTTCTGGTGTTCTTTaGGGTGGTAAGCTCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFSSGVL*GGKLFC Trigger: ACAAAAGAGCTTACCACCTCAAAGAACACCAGAAGA...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACAAATGGCTGTCCAAAATaGAAACCAATGGCTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTNGCPK*KPMAFP Trigger: AGGAAAAGCCATTGGTTTCCATTTTGGACAGCCATT...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR TCA 90 bp | GAAGCAGTTAAAATCAGCTGCAAAGTAGGAAAGGAGCTAAAAGGGAGACAGATCTCTCCAGATGCTTTTTaGGATAAAGCAGTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: EAVKISCKVGKELKGRQISPDAF*DKAVWN Trigger: ATTCCAGACTGCTTTATCTCAAAAAGCATCTGGAGA...GATCTGTCTCCCTTTTAGCTCCTTTCCTACTTTGCAGCTGATTTTAACTGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCAGAAGTGTTCTCAAATaGCTGTCCAAAATGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFRSVLK*LSKMET Trigger: GGTTTCCATTTTGGACAGCCATTTGAGAACACTTCT...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACAATTTGGTCATTTGTTTaGTCAAAGTTAGCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTIWSFV*SKLALI Trigger: GATGAGAGCTAACTTTGACCAAACAAATGACCAAAT...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCCTGAAGGATTTCATTTaGTCATTTGTTTGGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ALHILDRSGTYMLHSFLFLKDFI*SFVWSK Trigger: CTTTGACCAAACAAATGACCAAATGAAATCCTTCAG...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGCAGCAGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTGGGGAAGGCTGTGTATaGCAGGGTCCTGGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PSSSRAQPFLLNPSSAHSGEGCV*QGPGWE Trigger: TTCCCAGCCAGGACCCTGCAATACACAGCCTTCCCC...AGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCTGCTGCTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCAGCAGCAGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTCCCTGGTGTCAACTCTaGTTGTCTTCTGGGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: PSSSRAQPFLLNPSSAHSPWCQL*LSSGEE Trigger: TTCCTCCCCAGAAGACAACAAGAGTTGACACCAGGG...AGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCTGCTGCTGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS TCA 90 bp | GCAGATTCCATCACTGTTTGTTTCCAGGTAAGCATCTCTGAGCTCTaGCCTGAGAAAAGCTGGCTGGACTCCACAGGGGAAGGCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ADSITVCFQVSISEL*PEKSWLDSTGEGCV Trigger: TACACAGCCTTCCCCTGTGGAGTCCAGCCAGCTTTTCTCAGGTCAGAGCTCAGAGATGCTTACCTGGAAACAAACAGTGATGGAATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
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| CDS-3UTR CAA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTTGGTGTCAACTCTTGTaGTCTTCTGGGGAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: DDRTISVQTPGSKAASLSWCQLL*SSGEEG Trigger: GCCTTCCTCCCCAGAAGACAACAAGAGTTGACACCA...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CAA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTAAAGGGCAAGCCAGGTaGTCTTCTGCACTGGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DDRTISVQTPGSKAASLSKGQAR*SSALGL Trigger: AAGACCCAGTGCAGAAGACAACCTGGCTTGCCCTTT...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS-3UTR CAA 90 bp | AGGGCGCAGCCCTTTCTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGACAGGGCTCTGGGTCTaGAAGTCTAACTTCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: RAQPFLLNPSSAHSGQIRTGLWV*KSNFIS Trigger: AGAGATGAAGTTAGACTTCAAGACCCAGAGCCCTGT...CCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAGAAAGGGCTGCGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
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| CDS CCA 90 bp | GTAGGAGGTCCAGTCATGTTCAGAAGCAAAGGCGTGACCCACATTTaGGTCCTGGCCAGCATGGCTTCCATAGAGAGCAATTTGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: VGGPVMFRSKGVTHI*VLASMASIESNLMI Trigger: AATCATCAAATTGCTCTCTATGGAAGCCATGCTGGCCAGGACCCAAATGTGGGTCACGCCTTTGCTTCTGAACATGACTGGACCTCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCAGTTCTGAGTACAGGTaGTCTCCTGTGTGCTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NHFSANPRIQGCKPKSQVSSEYR*SPVCYR Trigger: CCTGTAGCACACAGGAGACAACCTGTACTCAGAACT...GACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | GATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTGCCCTCCATTCCTGGTaGTCATATGACTGTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DDRTISVQTPGSKAASLSALHSW*SYDCCR Trigger: CCTACAACAGTCATATGACAACCAGGAATGGAGGGC...ACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | GACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTTCAGATGTGGGACTaGTCTCCAAAGGGCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DRSDWMTEPFQCKPQDPRLQMWD*SPKGKP Trigger: TGGCTTGCCCTTTGGAGACAAGTCCCACATCTGAAG...CCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS GCA 90 bp | AAGGCATATCTGAGGGGCGCTGTTGAGCTGTGTATGGTAAAGACCTaGAGGAGATATTTTCTGCTCAGCAGACACAACTTGCTGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAYLRGAVELCMVKT*RRYFLLSRHNLLVP Trigger: TGGAACCAGCAAGTTGTGTCTGCTGAGCAGAAAATATCTCCTGCAGGTCTTTACCATACACAGCTCAACAGCGCCCCTCAGATATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGGTTGCAGTGGTGGGTaGTGCTTGAGCATGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDWMTEPFQCKPQDPRLQGCSGG*CLSMFL Trigger: AAGAAACATGCTCAAGCACAACCCACCACTGCAACC...TTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS TCA 90 bp | GACAAGCGTAGAACCTCTCACCATTGTGCTTTTCTTTGTGTCTGTTaGGATCACATAGGCGGAAAAACGACCATGTGCACCCAGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DKRRTSHHCAFLCVC*DHIGGKTTMCTQAH Trigger: ATGAGCCTGGGTGCACATGGTCGTTTTTCCGCCTATGTGATCTCAACAGACACAAAGAAAAGCACAATGGTGAGAGGTTCTACGCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCACACATGGCTGTATTTaGGGTCAAGAGAGTCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NHFSANPRIQGCKPKSQVTHGCI*GQESLV Trigger: GACAAGACTCTCTTGACCCAAAATACAGCCATGTGT...GACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGACAGATCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATGGCCACCAATTGGACTaGTCACCTGAGGATTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: KGDRSDWMTEPFQCKPQDGHQLD*SPEDSQ Trigger: TTGTGAATCCTCAGGTGACAAGTCCAATTGGTGGCC...ATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGATCTGTCTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATTGGATGACAGAACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAAAGCCTGGTATCCATTaGGCAATATCACCTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDWMTEPFQCKPQDPRLQKPGIH*AISPDF Trigger: GAAATCAGGTGATATTGCCAAATGGATACCAGGCTT...TTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTTCTGTCATCCAATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | AACCATTTCAGTGCAAACCCCAGGATCCAAGGCTGCAAGCCTAAGTCACAAGTCGAGCTGTATCAAAACTaGAGGTTTGTGTCTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NHFSANPRIQGCKPKSQVELYQN*RFVSES Trigger: ACTTTCAGACACAAACCTCAAGTTTTGATACAGCTC...GACTTGTGACTTAGGCTTGCAGCCTTGGATCCTGGGGTTTGCACTGAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTGAATCCTAGCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACAAGATTCCATCACTGTTaGTTTCCAGGTAAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNPSSAHSGQIRHIHVTRFHHC*FPGKHL Trigger: GAGATGCTTACCTGGAAACAAACAGTGATGGAATCT...TGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGCTAGGATTCAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCACATTCTGGACAGATCAGGCACATACATGTTACACAGTTTCTTATTCCCATTGTGCTTTTCTTaGTGTCTGTTGAGATCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ALHILDRSGTYMLHSFLFPLCFS*CLLRSH Trigger: ATGTGATCTCAACAGACACAAAGAAAAGCACAATGG...GAATAAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107129.2 |
||
| CDS TCA 90 bp | CTGAGGATCAAGGCTTTCTTTAATATTAGGTGTTCCATTCTGACTTaGGTAGAAATTTTGATCAACAGAGGTCCTCATCTGACCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRIKAFFNIRCSILT*VEILINRGPHLTQV Trigger: TACTTGGGTCAGATGAGGACCTCTGTTGATCAAAATTTCTACTCAAGTCAGAATGGAACACCTAATATTAAAGAAAGCCTTGATCCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS GCA 72 bp | GGGACTTGTCTCCAAAGGGCAAGCCAGGTTGTCTTCTaGACTGGGTCTTGTCCTCTTAGACCCAGGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTCLQRASQVVF*TGSCPLRPRKS Trigger: GCTCTTCCTGGGTCTAAGAGGACAAGACCCAGTGCAGAAGACAACCTGGCTTGCCCTTTGGAGACAAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | TCCAGTCATGTTCAGAAGCAAAGGCGTGACCCACATTaGGGTCCTGGCCAGCATGGCTTCCATAGAGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSHVQKQRRDPH*GPGQHGFHREQ Trigger: TTGCTCTCTATGGAAGCCATGCTGGCCAGGACCCAAATGTGGGTCACGCCTTTGCTTCTGAACATGACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 90 bp | AGTGTTTCTTCAGATGTGGGACTTGTCTCCAAAGGGCAAGCCAGGTaGTCTTCTGCACTGGGTCTTGTCCTCTTAGACCCAGGAAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSDVGLVSKGQAR*SSALGLVLLDPGRA Trigger: AGCTCTTCCTGGGTCTAAGAGGACAAGACCCAGTGCAGAAGACAACCTGGCTTGCCCTTTGGAGACAAGTCCCACATCTGAAGAAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | CTTCATTGTAGAAAGTCTCCCTGGTGTCAACTCTTGTaGTCTTCTGGGGAGGAAGGCATATCTGAGGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LHCRKSPWCQLL*SSGEEGISEGR Trigger: GCGCCCCTCAGATATGCCTTCCTCCCCAGAAGACAACAAGAGTTGACACCAGGGAGACTTTCTACAATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | TCTTCTGGGGAGGAAGGCATATCTGAGGGGCGCTGTTaGGCTGTGTATGGTAAAGACCTGCAGGAGATATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSGEEGISEGRC*AVYGKDLQEIF Trigger: AAATATCTCCTGCAGGTCTTTACCATACACAGCTCAACAGCGCCCCTCAGATATGCCTTCCTCCCCAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | CTGATGTCTGATAACCAGAGAGGGAGCACTCACCACTaGGGAGATTCTCCTGACCTTTGCAGACATTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LMSDNQRGSTHH*GDSPDLCRHSD Trigger: GTCAGAATGTCTGCAAAGGTCAGGAGAATCTCCTCAGTGGTGAGTGCTCCCTCTCTGGTTATCAGACATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS GCA 72 bp | CTGAGGGGCGCTGTTGAGCTGTGTATGGTAAAGACCTaGAGGAGATATTTTCTGCTCAGCAGACACAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRGAVELCMVKT*RRYFLLSRHNL Trigger: CAAGTTGTGTCTGCTGAGCAGAAAATATCTCCTGCAGGTCTTTACCATACACAGCTCAACAGCGCCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | TCTGACCCAAGTAGAGTGTTTCTTCAGATGTGGGACTaGTCTCCAAAGGGCAAGCCAGGTTGTCTTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDPSRVFLQMWD*SPKGKPGCLLH Trigger: GTGCAGAAGACAACCTGGCTTGCCCTTTGGAGACAAGTCCCACATCTGAAGAAACACTCTACTTGGGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS GCA 72 bp | GGGCTCTGGGTCTTGAAGTCTAACTTCATCTCTGGATaGTGTCTCTGGACTAAACTGGAAGCCGAAGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLWVLKSNFISG*CLWTKLEAEEF Trigger: AAACTCTTCGGCTTCCAGTTTAGTCCAGAGACAGCATCCAGAGATGAAGTTAGACTTCAAGACCCAGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | TTCAAAGGACTAGGGTCCTTCTGTGACACAGGGCTCTaGGTCTTGAAGTCTAACTTCATCTCTGGATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FKGLGSFCDTGL*VLKSNFISGCC Trigger: ACAGCATCCAGAGATGAAGTTAGACTTCAAGACCCAGAGCCCTGTGTCACAGAAGGACCCTAGTCCTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | AGTCTTCATTGTAGAAAGTCTCCCTGGTGTCAACTCTaGTTGTCTTCTGGGGAGGAAGGCATATCTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLHCRKSPWCQL*LSSGEEGISEG Trigger: CCCCTCAGATATGCCTTCCTCCCCAGAAGACAACAAGAGTTGACACCAGGGAGACTTTCTACAATGAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 90 bp | ACCCACATTTGGGTCCTGGCCAGCATGGCTTCCATAGAGAGCAATTaGATGATTATCAAAGGTAACCCTCTGATTCTCACACATGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: THIWVLASMASIESN*MIIKGNPLILTHGC Trigger: ACAGCCATGTGTGAGAATCAGAGGGTTACCTTTGATAATCATCAAATTGCTCTCTATGGAAGCCATGCTGGCCAGGACCCAAATGTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 90 bp | AACTTGAGGTTTGTGTCTGAAAGTCAGAGAGAGGCTGGCCACCAATaGGACTTGTCACCTGAGGATTCACAATCAAATCCTGGTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: NLRFVSESQREAGHQ*DLSPEDSQSNPGHI Trigger: GATGTGACCAGGATTTGATTGTGAATCCTCAGGTGACAAGTCCAATTGGTGGCCAGCCTCTCTCTGACTTTCAGACACAAACCTCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | CCAGGAAGAGCTGTATCAAAACTTGAGGTTTGTGTCTaGAAGTCAGAGAGAGGCTGGCCACCAATTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRAVSKLEVCV*KSERGWPPIGL Trigger: AAGTCCAATTGGTGGCCAGCCTCTCTCTGACTTTCAGACACAAACCTCAAGTTTTGATACAGCTCTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS GCA 72 bp | CCTGCAGGAGATATTTTCTGCTCAGCAGACACAACTTaGTGGTTCCAAGAAGTGTTCTCAAATGGCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGDIFCSADTT*WFQEVFSNGCP Trigger: TGGACAGCCATTTGAGAACACTTCTTGGAACCAGCAAGTTGTGTCTGCTGAGCAGAAAATATCTCCTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | TCTGACTCTCATAGAGAGTCAGATGCCCTCCATTCCTaGTTGTCATATGACTGTTGTAGGAGGTCCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SDSHRESDALHS*LSYDCCRRSSH Trigger: ATGACTGGACCTCCTACAACAGTCATATGACAACCAGGAATGGAGGGCATCTGACTCTCTATGAGAGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | TTGTGTCTGAAAGTCAGAGAGAGGCTGGCCACCAATTaGACTTGTCACCTGAGGATTCACAATCAAATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LCLKVRERLATN*TCHLRIHNQIL Trigger: CAGGATTTGATTGTGAATCCTCAGGTGACAAGTCCAATTGGTGGCCAGCCTCTCTCTGACTTTCAGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | CTTTTCCTGGGTATGCTGTTGAGTTCTGAGTACAGGTaGTCTCCTGTGTGCTACAGGATGCAGATTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LFLGMLLSSEYR*SPVCYRMQIPS Trigger: TGATGGAATCTGCATCCTGTAGCACACAGGAGACAACCTGTACTCAGAACTCAACAGCATACCCAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | CAAAATGGAAACCAATGGCTTTTCCTGGGTATGCTGTaGAGTTCTGAGTACAGGTTGTCTCCTGTGTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QNGNQWLFLGML*SSEYRLSPVCY Trigger: GTAGCACACAGGAGACAACCTGTACTCAGAACTCAACAGCATACCCAGGAAAAGCCATTGGTTTCCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | TTTGTGTCTGAAAGTCAGAGAGAGGCTGGCCACCAATaGGACTTGTCACCTGAGGATTCACAATCAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: FVSESQREAGHQ*DLSPEDSQSNP Trigger: AGGATTTGATTGTGAATCCTCAGGTGACAAGTCCAATTGGTGGCCAGCCTCTCTCTGACTTTCAGACACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | AAAATGGAAACCAATGGCTTTTCCTGGGTATGCTGTTaGGTTCTGAGTACAGGTTGTCTCCTGTGTGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: KMETNGFSWVCC*VLSTGCLLCAT Trigger: TGTAGCACACAGGAGACAACCTGTACTCAGAACTCAACAGCATACCCAGGAAAAGCCATTGGTTTCCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | AGACACAACTTGCTGGTTCCAAGAAGTGTTCTCAAATaGCTGTCCAAAATGGAAACCAATGGCTTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RHNLLVPRSVLK*LSKMETNGFSW Trigger: CCAGGAAAAGCCATTGGTTTCCATTTTGGACAGCCATTTGAGAACACTTCTTGGAACCAGCAAGTTGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | GCAGGAGATATTTTCTGCTCAGCAGACACAACTTGCTaGTTCCAAGAAGTGTTCTCAAATGGCTGTCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AGDIFCSADTTC*FQEVFSNGCPK Trigger: TTTTGGACAGCCATTTGAGAACACTTCTTGGAACCAGCAAGTTGTGTCTGCTGAGCAGAAAATATCTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | AAAGGTAACCCTCTGATTCTCACACATGGCTGTATTTaGGGTCAAGAGAGTCTTGTCAGAGTTCAGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KGNPLILTHGCI*GQESLVRVQCP Trigger: AGGACACTGAACTCTGACAAGACTCTCTTGACCCAAAATACAGCCATGTGTGAGAATCAGAGGGTTACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | GGAGATTCTCCTGACCTTTGCAGACATTCTGACCACTaGAGGATTTCATTTGGTCATTTGTTTGGTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GDSPDLCRHSDH*RISFGHLFGQS Trigger: ACTTTGACCAAACAAATGACCAAATGAAATCCTTCAGTGGTCAGAATGTCTGCAAAGGTCAGGAGAATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | CTAACTTCATCTCTGGATGCTGTCTCTGGACTAAACTaGAAGCCGAAGAGTTTTTCTGAGGTTGTTTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTSSLDAVSGLN*KPKSFSEVVFE Trigger: TTCAAAAACAACCTCAGAAAAACTCTTCGGCTTCCAGTTTAGTCCAGAGACAGCATCCAGAGATGAAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 90 bp | TTTGCAGACATTCTGACCACTGAAGGATTTCATTTGGTCATTTGTTaGGTCAAAGTTAGCTCTCATCTGAGGCTCATAGAAAGCCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FADILTTEGFHLVIC*VKVSSHLRLIESLV Trigger: TACCAGGCTTTCTATGAGCCTCAGATGAGAGCTAACTTTGACCAAACAAATGACCAAATGAAATCCTTCAGTGGTCAGAATGTCTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 90 bp | ATTCTCCTGACCTTTGCAGACATTCTGACCACTGAAGGATTTCATTaGGTCATTTGTTTGGTCAAAGTTAGCTCTCATCTGAGGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: ILLTFADILTTEGFH*VICLVKVSSHLRLI Trigger: TATGAGCCTCAGATGAGAGCTAACTTTGACCAAACAAATGACCAAATGAAATCCTTCAGTGGTCAGAATGTCTGCAAAGGTCAGGAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | CCCACATATGGAGCTTGCAAACTAAATGAAGTCACCTaGGGATCAAGGCTTTCTTTAATATTAGGTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PTYGACKLNEVT*GSRLSLILGVP Trigger: TGGAACACCTAATATTAAAGAAAGCCTTGATCCTCAGGTGACTTCATTTAGTTTGCAAGCTCCATATGTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | CTCAAAATAATTCTGTTCAGAAAAGGATGTTATGATTaGATTGGGATGAAGGGTCTGGCTACAACTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LKIILFRKGCYD*IGMKGLATTGC Trigger: GCACCCAGTTGTAGCCAGACCCTTCATCCCAATCAAATCATAACATCCTTTTCTGAACAGAATTATTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CAA 72 bp | ACCTTTGCAGACATTCTGACCACTGAAGGATTTCATTaGGTCATTTGTTTGGTCAAAGTTAGCTCTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: TFADILTTEGFH*VICLVKVSSHL Trigger: CAGATGAGAGCTAACTTTGACCAAACAAATGACCAAATGAAATCCTTCAGTGGTCAGAATGTCTGCAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS TCA 72 bp | GATCCTCAAAATAATTCTGTTCAGAAAAGGATGTTATaGTTTGATTGGGATGAAGGGTCTGGCTACAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPQNNSVQKRML*FDWDEGSGYNW Trigger: CCAGTTGTAGCCAGACCCTTCATCCCAATCAAATCATAACATCCTTTTCTGAACAGAATTATTTTGAGGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
||
| CDS CCA 72 bp | TCTCATCTGAGGCTCATAGAAAGCCTGGTATCCATTTaGCAATATCACCTGATTTCCATAGAATCCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: SHLRLIESLVSI*QYHLISIESII Trigger: AATAATGGATTCTATGGAAATCAGGTGATATTGCCAAATGGATACCAGGCTTTCTATGAGCCTCAGATGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
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| CDS TCA 72 bp | AAGGCTTTCTTTAATATTAGGTGTTCCATTCTGACTTaGGTAGAAATTTTGATCAACAGAGGTCCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: KAFFNIRCSILT*VEILINRGPHL Trigger: CAGATGAGGACCTCTGTTGATCAAAATTTCTACTCAAGTCAGAATGGAACACCTAATATTAAAGAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
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| CDS TCA 72 bp | ATTTCCTCTTATCAGTGTGTTTCTTCTGGTGTTCTTTaGGGTGGTAAGCTCTTTTGTAAAATTTCGTACAAC | + |
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Preference number: 6 (lower is better) Translates to: ISSYQCVSSGVL*GGKLFCKISYN Trigger: GTTGTACGAAATTTTACAAAAGAGCTTACCACCTCAAAGAACACCAGAAGAAACACACTGATAAGAGGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080541.5 ENSMUST00000107129.2 |
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