Pregenerated sensors for ZFP334 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017667Ensembl transcript IDs: ENSMUST00000103084.4
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGGCTCGGCAGGGAGGTCCAGGGCTGCAGCTTTCACCACCCGAGCTaGAGGGGGATTTTGATAAAGCAGCTGCTTCTGGGCCATCCTGCT | + |
Preference number: 1 (lower is better) Translates to: RLGREVQGCSFHHPS*RGILIKQLLLGHPA Trigger: AGCAGGATGGCCCAGAAGCAGCTGCTTTATCAAAATCCCCCTCCAGCTCGGGTGGTGAAAGCTGCAGCCCTGGACCTCCCTGCCGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CCAGCGGTCAGAAGGGAGCAGGCTCGCAGCACTGGGCCTGACAGGTaGGCTGAGAACCGTCACACTCTTCTGATCAGTGTGATGGGTTCT | + |
Preference number: 1 (lower is better) Translates to: PAVRREQARSTGPDR*AENRHTLLISVMGS Trigger: AGAACCCATCACACTGATCAGAAGAGTGTGACGGTTCTCAGCTCACCTGTCAGGCCCAGTGCTGCGAGCCTGCTCCCTTCTGACCGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | GACACGAGGACAGCTTGCAGGAGTTGGTTCTCTTCCTGTACCATGTaGGTCCCGGGACCAAACACAGGTTGTCTGGCTTGGTGGCAGGTG | + |
Preference number: 1 (lower is better) Translates to: DTRTACRSWFSSCTM*VPGPNTGCLAWWQV Trigger: CACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | TCCCCACCTGCTGGTGCTGTTTGGCAGGTTATAGAATACAGGAGGTaGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTGCA | + |
Preference number: 1 (lower is better) Translates to: SPPAGAVWQVIEYRR*SLTGGSGSLGVGLA Trigger: TGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 90 bp | TTGTGTATTTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCA | + |
Preference number: 1 (lower is better) Translates to: LCIWGPECVGDTRTA*RSWFSSCTMWVPGP Trigger: TGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAAATACACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 90 bp | GAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTaGAGTTTTATAGTGCATCACCTGACTCCATACCCTGGCTACCAG | + |
Preference number: 1 (lower is better) Translates to: EVEPYWRKWVTGGGP*SFIVHHLTPYPGYQ Trigger: CTGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | AATACAGGAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTaGGCCTTGCAGTTTTATAGTGCATCACCTGACTCCATACCCTGG | + |
Preference number: 1 (lower is better) Translates to: NTGGGALLEEVGHWG*ALQFYSASPDSIPW Trigger: CCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | GAGAGCAGGGCTGGCTCCCAGGACCTGACATTAACCCACCACGAATaGCAGACATTCTGGCTAGATGCACATATCCACACTACGTCATTC | + |
Preference number: 1 (lower is better) Translates to: ESRAGSQDLTLTHHE*QTFWLDAHIHTTSF Trigger: GAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTCCTGGGAGCCAGCCCTGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | CCTGACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATaGAGGACTGTGTACCTCTGGAACTGTGAGCCAAACCTTTTCTCC | + |
Preference number: 1 (lower is better) Translates to: PDSIPWLPASTSSLP*RTVYLWNCEPNLFS Trigger: GGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CCATGCCAAGGGCTGATTTGCCAGCTTAACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCCTTCTCACTTCATTGTCCTAGGAAA | + |
Preference number: 1 (lower is better) Translates to: PCQGLICQLNHRQGP*QDTQWPFSLHCPRK Trigger: TTTCCTAGGACAATGAAGTGAGAAGGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTGGTTAAGCTGGCAAATCAGCCCTTGGCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 90 bp | GAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAACTCACTGCCCCAAATAGAACTTCCT | + |
Preference number: 1 (lower is better) Translates to: ESAGQHHIYHYRASL*ARLQLNSLPQIELP Trigger: AGGAAGTTCTATTTGGGGCAGTGAGTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTaGCACTCATTATCAAAACTAAGCTGGACAACACAACTTACGGCA | + |
Preference number: 1 (lower is better) Translates to: PKSPTPQAEAADRSE*HSLSKLSWTTQLTA Trigger: TGCCGTAAGTTGTGTTGTCCAGCTTAGTTTTGATAATGAGTGTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 90 bp | GGACCTGACATTAACCCACCACGAATGGCAGACATTCTGGCTAGATaGACATATCCACACTACGTCATTCTATTTGGCACCATGGAGACG | + |
Preference number: 1 (lower is better) Translates to: GPDINPPRMADILAR*TYPHYVILFGTMET Trigger: CGTCTCCATGGTGCCAAATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | TCCTTCCATCCTTCTTATCTGGGAGGAGGAAGCCTCTTAACAGATTaGCCTGTAGAGAATTTTCTCGATGTGTGCCCAGCTCATTGGGAG | + |
Preference number: 1 (lower is better) Translates to: SFHPSYLGGGSLLTD*PVENFLDVCPAHWE Trigger: CTCCCAATGAGCTGGGCACACATCGAGAAAATTCTCTACAGGCCAATCTGTTAAGAGGCTTCCTCCTCCCAGATAAGAAGGATGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | CTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTaGAACTGTGAGCCAAACCTTTTCTCCCTTCACTTGCCTTTAAAG | + |
Preference number: 1 (lower is better) Translates to: LPASTSSLPWRTVYL*NCEPNLFSLHLPLK Trigger: CTTTAAAGGCAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | GTCCTTCCAGTCTCCACTCTAACTTGGGTCAAGTTGTTCAGTGTCTaGGAGTGTGACACCACAGATGGTTTCACTTGTATGGAACACTCA | + |
Preference number: 1 (lower is better) Translates to: VLPVSTLTWVKLFSV*ECDTTDGFTCMEHS Trigger: TGAGTGTTCCATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGAGTGGAGACTGGAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 90 bp | CACTGGCTTACCGAGCTGGACTTCAGTGTAATTGTTACTTTGGCCTaGCATACTTTCTTTCCTAGGGTGTGTTGCATCTCCCCAGTAAAA | + |
Preference number: 1 (lower is better) Translates to: HWLTELDFSVIVTLA*HTFFPRVCCISPVK Trigger: TTTTACTGGGGAGATGCAACACACCCTAGGAAAGAAAGTATGCCAGGCCAAAGTAACAATTACACTGAAGTCCAGCTCGGTAAGCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CTCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTGGAACTGTaGGCCAAACCTTTTCTCCCTTCACTTGCCTTTAAAGGATACTTT | + |
Preference number: 1 (lower is better) Translates to: LYIFLAMEDCVPLEL*AKPFLPSLAFKGYF Trigger: AAAGTATCCTTTAAAGGCAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CACTGGACCCTCAAGTGTCACTCTGATGTGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTTCCATTTATGGACTTAAATATTTCT | + |
Preference number: 1 (lower is better) Translates to: HWTLKCHSDVSCDFL*LGLSDLPFMDLNIS Trigger: AGAAATATTTAAGTCCATAAATGGAAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGACACATCAGAGTGACACTTGAGGGTCCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 90 bp | CTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTTCAATGTaGCCTTACGGAATAAGGCTTTTACAGATGCCAATCAACATGAGG | + |
Preference number: 1 (lower is better) Translates to: LRVPIMSLQPLILSM*PYGIRLLQMPINMR Trigger: CCTCATGTTGATTGGCATCTGTAAAAGCCTTATTCCGTAAGGTCACATTGAAAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | TTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTaGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCAAACACAGG | + |
Preference number: 2 (lower is better) Translates to: LGTRVCGGHEDSLQE*VLFLYHVGPGTKHR Trigger: CCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGGTCAGAGGACAGTCCTaGGGAGCCGGGTCTCGCTGT | + |
Preference number: 2 (lower is better) Translates to: DSIPWLPASTSSLPWRTVVRGQS*GAGSRC Trigger: ACAGCGAGACCCGGCTCCGCAGGACTGTCCTCTGAC...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | CTTGTGTATTTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTaGCAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACC | + |
Preference number: 2 (lower is better) Translates to: LVYLGTRVCGGHEDS*QELVLFLYHVGPGT Trigger: GGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAAATACACAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCC | + |
Preference number: 2 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDHRQGP*QDTQWP Trigger: GGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTG...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | CGAGGCCTGAGACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTaGCCTACAGTCACACCTCTGTGTATATACACATACACGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: RGLRHGLSHATASPQ*PTVTPLCIYTYTAG Trigger: GCCTGCCGTGTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTCTCAGGCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | GGAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTaGCAGTTTTATAGTGCATCACCTGACTCCATACCCTGGCTACCA | + |
Preference number: 2 (lower is better) Translates to: GGGALLEEVGHWGWA*QFYSASPDSIPWLP Trigger: TGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGCCTGTTCCAGCTCCTaGCTCCAGGTTCTGCCCTCA | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHACSSS*LQVLPS Trigger: TGAGGGCAGAACCTGGAGGCAGGAGCTGGAACAGGC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAAC | + |
Preference number: 2 (lower is better) Translates to: DSIPWLPASTSSLPWRTVYRASL*ARLQLN Trigger: GTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGTTTGTTCCGTGGTTTaGAAGGGAGGCAGGCACACC | + |
Preference number: 2 (lower is better) Translates to: SLSTFIGVPGCWLAEQAEVCSVV*KGGRHT Trigger: GGTGTGCCTGCCTCCCTTTCAAACCACGGAACAAAC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTGGCTTGGTGGCAGGTaGTGTTACCCCACACCATCT | + |
Preference number: 2 (lower is better) Translates to: DSIPWLPASTSSLPWRTVWLGGR*CYPTPS Trigger: AGATGGTGTGGGGTAACATCACCTGCCACCAAGCCA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | TTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCAAACACAGGTaGTCTGGCTTGGTGGCAGGTGATGTTACCCCACACCATCTGGAA | + |
Preference number: 2 (lower is better) Translates to: LVLFLYHVGPGTKHR*SGLVAGDVTPHHLE Trigger: TTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATATAGGTGTCCCGGGTTaGTGGCTTGCAGAACAAGCG | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHIGVPG*WLAEQA Trigger: CGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTAT...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCTTCCTGTACCATGTaGGTCCCGGGACCAAACACA | + |
Preference number: 2 (lower is better) Translates to: CAAGDTPLSGLLEACSQKSSCTM*VPGPNT Trigger: TGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGCCTGCTCTAAGAGAATaGCTACTCTCTGCCTCACGG | + |
Preference number: 2 (lower is better) Translates to: DSIPWLPASTSSLPWRTVPALRE*LLSASR Trigger: CCGTGAGGCAGAGAGTAGCCATTCTCTTAGAGCAGG...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGGGACATCCAGATATCTaGTGGCCAGAGAGCCCTGTT | + |
Preference number: 2 (lower is better) Translates to: CAAGDTPLSGLLEACSQKGHPDI*WPESPV Trigger: AACAGGGCTCTCTGGCCACCAGATATCTGGATGTCC...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | GCATCACCTGACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTaGCCATGGAGGACTGTGTACCTCTGGAACTGTGAGCCAAACCTT | + |
Preference number: 2 (lower is better) Translates to: ASPDSIPWLPASTSS*PWRTVYLWNCEPNL Trigger: AAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGGTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTGCCAAGGGCTGATTTaGCAGCTTAACCACAGGCAA | + |
Preference number: 2 (lower is better) Translates to: SLSTFIGVPGCWLAEQAECQGLI*QLNHRQ Trigger: TTGCCTGTGGTTAAGCTGGCAAATCAGCCCTTGGCA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATCAGAGACGACAGACATaGACAGTGAGGAGGAACAGG | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHQRRQT*TVRRNR Trigger: CCTGTTCCTCCTCACTGTGCATGTCTGTCGTCTCTG...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTCATACTGGGATTTCTaGTGGGTCTCAAACAAGGGG | + |
Preference number: 2 (lower is better) Translates to: SLSTFIGVPGCWLAEQAESYWDF*WVSNKG Trigger: CCCCTTGTTTGAGACCCATCAGAAATCCCAGTATGA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTT | + |
Preference number: 2 (lower is better) Translates to: CAAGDTPLSGLLEACSQKSCDFL*LGLSDL Trigger: AAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTGATGAGATCGCCAAGTaGTTTCAACATGGGCTGCTG | + |
Preference number: 2 (lower is better) Translates to: SSPTDFTQPTDIEALCLVDEIAK*FQHGLL Trigger: CAGCAGCCCATGTTGAAATCACTTGGCGATCTCATC...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGCCAGCAAGCACCTTTaGTTGCTAATCCTTGTCAGG | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHASKHL*LLILVR Trigger: CCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCC | + |
Preference number: 2 (lower is better) Translates to: SHTSVYIHIHGRRAGCKSDTRTA*RSWFSS Trigger: GGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTTAGTGTTTGTTCCGTaGTTTGAAAGGGAGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: DSIPWLPASTSSLPWRTVLVFVP*FEREAG Trigger: GCCTGCCTCCCTTTCAAACCACGGAACAAACACTAA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCTTACCCCACACCATCTaGAAGCCCCTCAGAGTCTTT | + |
Preference number: 2 (lower is better) Translates to: DESAGQHHIYHYRASLCALPHTI*KPLRVF Trigger: AAAGACTCTGAGGGGCTTCCAGATGGTGTGGGGTAA...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGACAGAAGCAAAACCTaGAGTTGCATTGCCACAAGC | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHDRSKT*SCIATS Trigger: GCTTGTGGCAATGCAACTTCAGGTTTTGCTTCTGTC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATCTCGGCTTTAGCAAATaGTTACTGCTGTGTGGGAGT | + |
Preference number: 2 (lower is better) Translates to: STSSHPADESAGQHHIYHLGFSK*LLLCGS Trigger: ACTCCCACACAGCAGTAAGCATTTGCTAAAGCCGAG...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR GCA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGACATTCTGGCTAGATaGACATATCCACACTACGTC | + |
Preference number: 2 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDDILAR*TYPHYV Trigger: GACGTAGTGTGGATATGTGCATCTAGCCAGAATGTC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR CCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGCGGTCACTGTTTTCTTaGCTTACATGGAAGCTCAAG | + |
Preference number: 2 (lower is better) Translates to: CAAGDTPLSGLLEACSQKRSLFS*LTWKLK Trigger: CTTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCG...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR CCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAATCAGAGAGCAGGGCTaGCTCCCAGGACCTGACATT | + |
Preference number: 2 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRIREQG*LPGPDI Trigger: AATGTCAGGTCCTGGGAGCCAGCCCTGCTCTCTGAT...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR CCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTACAGCTTGCAGGAGTTaGTTCTCTTCCTGTACCATG | + |
Preference number: 2 (lower is better) Translates to: SSPTDFTQPTDIEALCLVTACRS*FSSCTM Trigger: CATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGT...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTACTGGGCCTGACAGGTaGGCTGAGAACCGTCACACT | + |
Preference number: 2 (lower is better) Translates to: KHGVRLRVPIMSLQPLILTGPDR*AENRHT Trigger: AGTGTGACGGTTCTCAGCTCACCTGTCAGGCCCAGT...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR GCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCGGGTTGTCAGGCTTaGCAGCAAGCACCTTTGCTT | + |
Preference number: 2 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRSGCQA*QQAPLL Trigger: AAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR CCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAATGCTTACTGCTGTGTaGGAGTCGCTACAGGTAGGG | + |
Preference number: 2 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRMLTAV*ESLQVG Trigger: CCCTACCTGTAGCGACTCCCACACAGCAGTAAGCAT...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR CAA 90 bp | ACGGAAGGTCTGAACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTaGCTTGCTAATCCTTGTCAGGCCTCTATCAGTAATTTTAAAAGC | + |
Preference number: 2 (lower is better) Translates to: TEGLNSGCQACQQAP*LANPCQASISNFKS Trigger: GCTTTTAAAATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 90 bp | TTCCTTCCATCCTTCTTATCTGGGAGGAGGAAGCCTCTTAACAGATaGGCCTGTAGAGAATTTTCTCGATGTGTGCCCAGCTCATTGGGA | + |
Preference number: 2 (lower is better) Translates to: FLPSFLSGRRKPLNR*ACREFSRCVPSSLG Trigger: TCCCAATGAGCTGGGCACACATCGAGAAAATTCTCTACAGGCCAATCTGTTAAGAGGCTTCCTCCTCCCAGATAAGAAGGATGGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR TCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGAAGGGTGGCTCGGCTaGCTCACCTTTGCAGATGAA | + |
Preference number: 2 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQEGWLG*LTFADE Trigger: TTCATCTGCAAAGGTGAGTCAGCCGAGCCACCCTTC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCTTCATTTTTGGTTTTaGTATGGTAACTGCGGTCAC | + |
Preference number: 2 (lower is better) Translates to: DESAGQHHIYHYRASLCALHFWF*YGNCGH Trigger: GTGACCGCAGTTACCATAGCAAAACCAAAAATGAAG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGAGTAAGTATAGGGAATaGACTTTGACAAGTGTGGTA | + |
Preference number: 2 (lower is better) Translates to: CAAGDTPLSGLLEACSQKSKYRE*TLTSVV Trigger: TACCACACTTGTCAAAGTGCATTCCCTATACTTACT...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCGTTTTCTCAGAAGCTaGCAGGTAAATTCTAAATCA | + |
Preference number: 2 (lower is better) Translates to: SSPTDFTQPTDIEALCLVRFLRS*QVNSKS Trigger: TGATTTAGAATTTACCTGTCAGCTTCTGAGAAAACG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTTTTTCTTGGCTTACATaGAAGCTCAAGGAGGCACTT | + |
Preference number: 2 (lower is better) Translates to: TLKTALLSVCLGRQPTYSFSWLT*KLKEAL Trigger: AAGTGCCTCCTTGAGCTTCCATGTAAGCCAAGAAAA...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGATTTGTCTCATAAGTaGCAAGCAGAAGGCACAATT | + |
Preference number: 2 (lower is better) Translates to: SHTSVYIHIHGRRAGCKSDLSHK*QAEGTI Trigger: AATTGTGCCTTCTGCTTGCCACTTATGAGACAAATC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCATGTCCTGATAAAATaGAAACATAGACAGACATCC | + |
Preference number: 2 (lower is better) Translates to: DESAGQHHIYHYRASLCAHVLIK*KHRQTS Trigger: GGATGTCTGTCTATGTTTCCATTTTATCAGGACATG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCAAAATACATTTATGCTaGGTAGTAATGGCAGCACAC | + |
Preference number: 2 (lower is better) Translates to: DESAGQHHIYHYRASLCAKIHLC*VVMAAH Trigger: GTGTGCTGCCATTACTACCCAGCATAAATGTATTTT...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR TCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTTATTAGAAAACCAATaGCTCGGCTTTAGCAAATGC | + |
Preference number: 2 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQLLENQ*LGFSKC Trigger: GCATTTGCTAAAGCCGAGTCATTGGTTTTCTAATAA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGACTACGTCATTCTATTTaGCACCATGGAGACGTTTTC | + |
Preference number: 2 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRLRHSI*HHGDVF Trigger: GAAAACGTCTCCATGGTGCCAAATAGAATGACGTAG...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACAACTGGTAATGATCTaGAATCAACACTGGCCTCAC | + |
Preference number: 2 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQQLVMI*NQHWPH Trigger: GTGAGGCCAGTGTTGATTCCAGATCATTACCAGTTG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR GCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAATTACAAGCCACCTTGTaGCTCTTATTAGAAAACCAA | + |
Preference number: 2 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQLQATL*LLLENQ Trigger: TTGGTTTTCTAATAAGAGGCACAAGGTGGCTTGTAA...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGAAAGAGTTTCCAATTaGCACATAAACATGCAATTG | + |
Preference number: 2 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQERVSN*HINMQL Trigger: CAATTGCATGTTTATGTGCCAATTGGAAACTCTTTC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GGTGGCCAGAGAGCCCTGTTGATAATAGTCCCTGTGTaGGGGGCGTTCTGTGGGGTCTGCAGGCATCAGGTG | + |
Preference number: 3 (lower is better) Translates to: GGQRALLIIVPV*GAFCGVCRHQV Trigger: CACCTGATGCCTGCAGACCCCACAGAACGCCCCCCACACAGGGACTATTATCAACAGGGCTCTCTGGCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTTaGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCA | + |
Preference number: 3 (lower is better) Translates to: ECVGDTRTACRS*FSSCTMWVPGP Trigger: TGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGCTGTTGTCTGTGTGCTaGGGACGGCAGCCCACGTAC | + |
Preference number: 3 (lower is better) Translates to: CAAGDTPLSGLLEACSQKLLSVC*GRQPTY Trigger: GTACGTGGGCTGCCGTCCCAAGCACACAGACAACAG...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | CGGGACCAAACACAGGTTGTCTGGCTTGGTGGCAGGTaGTGTTACCCCACACCATCTGGAAGCCCCTCAGAG | + |
Preference number: 3 (lower is better) Translates to: RDQTQVVWLGGR*CYPTPSGSPSE Trigger: CTCTGAGGGGCTTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | TGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTC | + |
Preference number: 3 (lower is better) Translates to: WGPECVGDTRTA*RSWFSSCTMWV Trigger: GACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | GGACCTGAGAGAGCTCAAACCCCAGCAGAGAGTCACTaGCTGGGACATCCAGATATCTGGTGGCCAGAGAGC | + |
Preference number: 3 (lower is better) Translates to: GPERAQTPAESH*LGHPDIWWPES Trigger: GCTCTCTGGCCACCAGATATCTGGATGTCCCAGTCAGTGACTCTCTGCTGGGGTTTGAGCTCTCTCAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | AGCAAGCAGCGCTCCTCCATGGCCTGTTCCAGCTCCTaGCTCCAGGTTCTGCCCTCATTTACCATAGGTACA | + |
Preference number: 3 (lower is better) Translates to: SKQRSSMACSSS*LQVLPSFTIGT Trigger: TGTACCTATGGTAAATGAGGGCAGAACCTGGAGGCAGGAGCTGGAACAGGCCATGGAGGAGCGCTGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | CTGAGAGAGCTCAAACCCCAGCAGAGAGTCACTGACTaGGACATCCAGATATCTGGTGGCCAGAGAGCCCTG | + |
Preference number: 3 (lower is better) Translates to: LRELKPQQRVTD*DIQISGGQRAL Trigger: CAGGGCTCTCTGGCCACCAGATATCTGGATGTCCCAGTCAGTGACTCTCTGCTGGGGTTTGAGCTCTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTaGGCCTTGCAGTTTTATAGTGCATCACCTGACTCC | + |
Preference number: 3 (lower is better) Translates to: GGALLEEVGHWG*ALQFYSASPDS Trigger: GGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GCTGGTGCTGTTTGGCAGGTTATAGAATACAGGAGGTaGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTG | + |
Preference number: 3 (lower is better) Translates to: AGAVWQVIEYRR*SLTGGSGSLGV Trigger: CACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTATAGGTGTCCCGGGTaGCTGGCTTGCAGAACAAGC | + |
Preference number: 3 (lower is better) Translates to: SSPTDFTQPTDIEALCLVYRCPG*LACRTS Trigger: GCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGGAGGCAGCTGTGCCTTaGGAGTTAGAGTCAGCAATG | + |
Preference number: 3 (lower is better) Translates to: CAAGDTPLSGLLEACSQKEAAVP*ELESAM Trigger: CATTGCTGACTCTAACTCCAAAGGCACAGCTGCCTC...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | CGTGAGACGGAAGGTCTGAACTCGGGTTGTCAGGCTTaGCAGCAAGCACCTTTGCTTGCTAATCCTTGTCAG | + |
Preference number: 3 (lower is better) Translates to: RETEGLNSGCQA*QQAPLLANPCQ Trigger: CTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGTCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | GGGCAACACCACATCTATCATTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAACTCACTGCCCCAAATA | + |
Preference number: 3 (lower is better) Translates to: GQHHIYHYRASL*ARLQLNSLPQI Trigger: TATTTGGGGCAGTGAGTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | CCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTaGAGTTTTATAGTGCATCACCTGACTCCATACCCT | + |
Preference number: 3 (lower is better) Translates to: PYWRKWVTGGGP*SFIVHHLTPYP Trigger: AGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GGTTGCTGGCTTGCAGAACAAGCGGAGTCCTCTCACTaGACCCTCAAGTGTCACTCTGATGTGTCTTGTGAC | + |
Preference number: 3 (lower is better) Translates to: GCWLAEQAESSH*TLKCHSDVSCD Trigger: GTCACAAGACACATCAGAGTGACACTTGAGGGTCCAGTGAGAGGACTCCGCTTGTTCTGCAAGCCAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GCCCCTCAGAGTCTTTATAGATGCAGTAATAATCGCTaGGGAAGGAGACTAGCCAGTCAGGCTGCTGAGCCG | + |
Preference number: 3 (lower is better) Translates to: APQSLYRCSNNR*GRRLASQAAEP Trigger: CGGCTCAGCAGCCTGACTGGCTAGTCTCCTTCCCCAGCGATTATTACTGCATCTATAAAGACTCTGAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | GGGCTGATTTGCCAGCTTAACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCCTTCTCACTTCATTGT | + |
Preference number: 3 (lower is better) Translates to: GLICQLNHRQGP*QDTQWPFSLHC Trigger: ACAATGAAGTGAGAAGGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTGGTTAAGCTGGCAAATCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | AGTGGTACTCAGTCCTCAGCCCTCTCTAGTACATTCTaGGCTGATGGGACAGCTTTGAGGGGGAACTTCGTG | + |
Preference number: 3 (lower is better) Translates to: SGTQSSALSSTF*ADGTALRGNFV Trigger: CACGAAGTTCCCCCTCAAAGCTGTCCCATCAGCTCAGAATGTACTAGAGAGGGCTGAGGACTGAGTACCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | ATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATaGAGGACTGTGTACCTCTGGAACTGTGAGCCAAAC | + |
Preference number: 3 (lower is better) Translates to: IPWLPASTSSLP*RTVYLWNCEPN Trigger: GTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCGGCTGACTCACCTTaGCAGATGAAGGGATTAGGG | + |
Preference number: 3 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQSADSP*QMKGLG Trigger: CCCTAATCCCTTCATCTGCAAAGGTGAGTCAGCCGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGCGGTCACTGTTTTCTaGGCTTACATGGAAGCTCAA | + |
Preference number: 3 (lower is better) Translates to: SLSTFIGVPGCWLAEQAEAVTVF*AYMEAQ Trigger: TTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCGC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | ACTGTATGCAGTCAGTGGACAGTGTCAGCGCATTCCTaGAAACAACAGGGCACTCTAAGGCATCGCATGAAG | + |
Preference number: 3 (lower is better) Translates to: TVCSQWTVSAHS*KQQGTLRHRMK Trigger: CTTCATGCGATGCCTTAGAGTGCCCTGTTGTTTGCAGGAATGCGCTGACACTGTCCACTGACTGCATACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | GACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTTaGCTACAGTCACACCTCTGTGTATATACACATACA | + |
Preference number: 3 (lower is better) Translates to: DTGSVMPQLPHS*LQSHLCVYTHT Trigger: TGTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | GCTAATGTGTCTGAATGCTTGGTCCCCACCTGCTGGTaGTGTTTGGCAGGTTATAGAATACAGGAGGTGGAG | + |
Preference number: 3 (lower is better) Translates to: ANVSECLVPTCW*CLAGYRIQEVE Trigger: CTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACACATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | ACTGCCCAGTTATCCCAGGAACAACTGGTAATGATCTaGAATCAACACTGGCCTCACGCCCACATCATACGC | + |
Preference number: 3 (lower is better) Translates to: TAQLSQEQLVMI*NQHWPHAHIIR Trigger: GCGTATGATGTGGGCGTGAGGCCAGTGTTGATTCCAGATCATTACCAGTTGTTCCTGGGATAACTGGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR CCA 72 bp | TATAGAATACAGGAGGTGGAGCCTTACTGGAGGAAGTaGGTCACTGGGGGTGGGCCTTGCAGTTTTATAGTG | + |
Preference number: 3 (lower is better) Translates to: YRIQEVEPYWRK*VTGGGPCSFIV Trigger: CACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | TGTCTGAATGCTTGGTCCCCACCTGCTGGTGCTGTTTaGCAGGTTATAGAATACAGGAGGTGGAGCCTTACT | + |
Preference number: 3 (lower is better) Translates to: CLNAWSPPAGAV*QVIEYRRWSLT Trigger: AGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR-3UTR CAA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACAACACAGACACTGTTTaGACTCAAACACTCCCCAAA | + |
Preference number: 3 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDNTDTV*TQTLPK Trigger: TTTGGGGAGTGTTTGAGTCAAAACAGTGTCTGTGTT...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | AGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAACCTaGAGTTGCATTGCCACAAGCTGTAGGAAGACCACA | + |
Preference number: 3 (lower is better) Translates to: RRNRRSEDRSKT*SCIATSCRKTT Trigger: TGTGGTCTTCCTACAGCTTGTGGCAATGCAACTTCAGGTTTTGCTTCTGTCCTCACTACGCCTGTTCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR TCA 72 bp | CGTTCTGTGGGGTCTGCAGGCATCAGGTGCAGCTTTTaGACACTTCACACTAGATGTGAAGGATCTGCTGTA | + |
Preference number: 3 (lower is better) Translates to: RSVGSAGIRCSF*TLHTRCEGSAV Trigger: TACAGCAGATCCTTCACATCTAGTGTGAAGTGTTCAAAAGCTGCACCTGATGCCTGCAGACCCCACAGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | CCACACCATCTGGAAGCCCCTCAGAGTCTTTATAGATaGAGTAATAATCGCTGGGGAAGGAGACTAGCCAGT | + |
Preference number: 3 (lower is better) Translates to: PHHLEAPQSLYR*SNNRWGRRLAS Trigger: ACTGGCTAGTCTCCTTCCCCAGCGATTATTACTGCATCTATAAAGACTCTGAGGGGCTTCCAGATGGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | CTGGCTTGGTGGCAGGTGATGTTACCCCACACCATCTaGAAGCCCCTCAGAGTCTTTATAGATGCAGTAATA | + |
Preference number: 3 (lower is better) Translates to: LAWWQVMLPHTI*KPLRVFIDAVI Trigger: TATTACTGCATCTATAAAGACTCTGAGGGGCTTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | TTCCAAAGGACCAGAGTTCAATACCCAGCATCCGCATaGCAGCTCACAACTGTAATCCCAGTTCCAGAGGAT | + |
Preference number: 3 (lower is better) Translates to: FQRTRVQYPASA*QLTTVIPVPED Trigger: ATCCTCTGGAACTGGGATTACAGTTGTGAGCTGCCATGCGGATGCTGGGTATTGAACTCTGGTCCTTTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | TTGCAGTTTTATAGTGCATCACCTGACTCCATACCCTaGCTACCAGCCTCTACATCTTCCTTGCCATGGAGG | + |
Preference number: 3 (lower is better) Translates to: LQFYSASPDSIP*LPASTSSLPWR Trigger: CCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | AAAATCAGTTCTCTCTATTACGTGAGACGGAAGGTCTaGACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTT | + |
Preference number: 3 (lower is better) Translates to: KISSLYYVRRKV*TRVVRLASKHL Trigger: AAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGTCTCACGTAATAGAGAGAACTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | AACACTCACTCGCATCATGTGCCTGGCTTTGTCATTTaGCGTTCACATTTTCTTCCTGGCTGCTCGGTCTGT | + |
Preference number: 3 (lower is better) Translates to: NTHSHHVPGFVI*RSHFLPGCSVC Trigger: ACAGACCGAGCAGCCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR GCA 72 bp | AAACTCACCTCCTGCTCTAAGAGAATGGCTACTCTCTaGCTCACGGGCAGAATAGGAGCAATTACAACAGCA | + |
Preference number: 3 (lower is better) Translates to: KLTSCSKRMATL*LTGRIGAITTA Trigger: TGCTGTTGTAATTGCTCCTATTCTGCCCGTGAGGCAGAGAGTAGCCATTCTCTTAGAGCAGGAGGTGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | CACTTCACACTAGATGTGAAGGATCTGCTGTATAGGTaGAAGCCAAGGCTTTCCCAAGTAGTCCCACTGACT | + |
Preference number: 3 (lower is better) Translates to: HFTLDVKDLLYR*KPRLSQVVPLT Trigger: AGTCAGTGGGACTACTTGGGAAAGCCTTGGCTTCCACCTATACAGCAGATCCTTCACATCTAGTGTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR CCA 72 bp | TCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTaGAACTGTGAGCCAAACCTTTTCTCCCTTCACTTG | + |
Preference number: 3 (lower is better) Translates to: STSSLPWRTVYL*NCEPNLFSLHL Trigger: CAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTATAGGGAATGCACTTaGACAAGTGTGGTAAAAATG | + |
Preference number: 3 (lower is better) Translates to: DSIPWLPASTSSLPWRTVYRECT*TSVVKM Trigger: CATTTTTACCACACTTGTCAAAGTGCATTCCCTATA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR TCA 72 bp | GTCTCCACTCTAACTTGGGTCAAGTTGTTCAGTGTCTaGGAGTGTGACACCACAGATGGTTTCACTTGTATG | + |
Preference number: 3 (lower is better) Translates to: VSTLTWVKLFSV*ECDTTDGFTCM Trigger: CATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGAGTGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | ATTAACCCACCACGAATGGCAGACATTCTGGCTAGATaGACATATCCACACTACGTCATTCTATTTGGCACC | + |
Preference number: 3 (lower is better) Translates to: INPPRMADILAR*TYPHYVILFGT Trigger: GGTGCCAAATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
||
3UTR GCA 72 bp | TTTAAAACAACTTTAAAAACTGCACTGTTGTCTGTGTaGTTGGGACGGCAGCCCACGTACAGTCAGAGGACA | + |
Preference number: 3 (lower is better) Translates to: FKTTLKTALLSV*LGRQPTYSQRT Trigger: TGTCCTCTGACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGTTGTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | ACAACTGCATACAGTACCCAGCCTGGTGCCTCTCTCTaGCATAGCATATTGTACTGGTCTATAGCTTGTAAT | + |
Preference number: 3 (lower is better) Translates to: TTAYSTQPGASL*HSILYWSIACN Trigger: ATTACAAGCTATAGACCAGTACAATATGCTATGGCAGAGAGAGGCACCAGGCTGGGTACTGTATGCAGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | GACCTGACATTAACCCACCACGAATGGCAGACATTCTaGCTAGATGCACATATCCACACTACGTCATTCTAT | + |
Preference number: 3 (lower is better) Translates to: DLTLTHHEWQTF*LDAHIHTTSFY Trigger: ATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | CCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTaGGAGTTTTCTAAGACCAAGCGAAGAAAAGTAAGT | + |
Preference number: 3 (lower is better) Translates to: PQDSSPTSSTRS*EFSKTKRRKVS Trigger: ACTTACTTTTCTTCGCTTGGTCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR-3UTR CAA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAATTAAAAACTGCACTGTaGTCTGTGTGCTTGGGACGG | + |
Preference number: 3 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQLKTAL*SVCLGR Trigger: CCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAA...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | TTACAAGCCACCTTGTGCCTCTTATTAGAAAACCAATaGCTCGGCTTTAGCAAATGCTTACTGCTGTGTGGG | + |
Preference number: 3 (lower is better) Translates to: LQATLCLLLENQ*LGFSKCLLLCG Trigger: CCCACACAGCAGTAAGCATTTGCTAAAGCCGAGTCATTGGTTTTCTAATAAGAGGCACAAGGTGGCTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | CTCAAGTGTCACTCTGATGTGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTTCCATTTATGGACTTA | + |
Preference number: 3 (lower is better) Translates to: LKCHSDVSCDFL*LGLSDLPFMDL Trigger: TAAGTCCATAAATGGAAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGACACATCAGAGTGACACTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | TCTAACTTGGGTCAAGTTGTTCAGTGTCTGAGAGTGTaGCACCACAGATGGTTTCACTTGTATGGAACACTC | + |
Preference number: 3 (lower is better) Translates to: SNLGQVVQCLRV*HHRWFHLYGTL Trigger: GAGTGTTCCATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | GAAAAACTCCTATACCCTCGGATTGTGGCTTGTTTATaGGACGTCTCCCATAGGCTAATGTGTCTGAATGCT | + |
Preference number: 3 (lower is better) Translates to: EKLLYPRIVACL*DVSHRLMCLNA Trigger: AGCATTCAGACACATTAGCCTATGGGAGACGTCTCATAAACAAGCCACAATCCGAGGGTATAGGAGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CCA 72 bp | TTCACTTGTATGGAACACTCACTCGCATCATGTGCCTaGCTTTGTCATTTGACGTTCACATTTTCTTCCTGG | + |
Preference number: 3 (lower is better) Translates to: FTCMEHSLASCA*LCHLTFTFSSW Trigger: CCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | ACTTTGGCCTGGCATACTTTCTTTCCTAGGGTGTGTTaGATCTCCCCAGTAAAAGTCTCACACAACAAATAT | + |
Preference number: 3 (lower is better) Translates to: TLAWHTFFPRVC*ISPVKVSHNKY Trigger: ATATTTGTTGTGTGAGACTTTTACTGGGGAGATGCAACACACCCTAGGAAAGAAAGTATGCCAGGCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR GCA 72 bp | TGGTTTCACTTGTATGGAACACTCACTCGCATCATGTaGCTGGCTTTGTCATTTGACGTTCACATTTTCTTC | + |
Preference number: 3 (lower is better) Translates to: WFHLYGTLTRIM*LALSFDVHIFF Trigger: GAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAAGTGAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | CCAATAATGTCCCTCCAGCCTCTAATACTTTCAATGTaGCCTTACGGAATAAGGCTTTTACAGATGCCAATC | + |
Preference number: 3 (lower is better) Translates to: PIMSLQPLILSM*PYGIRLLQMPI Trigger: GATTGGCATCTGTAAAAGCCTTATTCCGTAAGGTCACATTGAAAGTATTAGAGGCTGGAGGGACATTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | TTCTATTTGGCACCATGGAGACGTTTTCTCAGAAGCTaGCAGGTAAATTCTAAATCATACCCCTATGGACAT | + |
Preference number: 3 (lower is better) Translates to: FYLAPWRRFLRS*QVNSKSYPYGH Trigger: ATGTCCATAGGGGTATGATTTAGAATTTACCTGTCAGCTTCTGAGAAAACGTCTCCATGGTGCCAAATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | AGAGTTTCCAATTGGCACATAAACATGCAATTGCCCTaGTCTTTAACCCTTCATTTGGATGTGTGTGTGTGT | + |
Preference number: 3 (lower is better) Translates to: RVSNWHINMQLP*SLTLHLDVCVC Trigger: ACACACACACACATCCAAATGAAGGGTTAAAGATCAGGGCAATTGCATGTTTATGTGCCAATTGGAAACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR TCA 72 bp | ACAGGGCACTCTAAGGCATCGCATGAAGACATTAGCTaGGAAAATAGACACTTTCCTAAATATCCAAAGACT | + |
Preference number: 3 (lower is better) Translates to: TGHSKASHEDIS*ENRHFPKYPKT Trigger: AGTCTTTGGATATTTAGGAAAGTGTCTATTTTCTCAGCTAATGTCTTCATGCGATGCCTTAGAGTGCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGGCCGCTCGCCCGTGTaGGTCTTCTGGTGGTGCCTG | + |
Preference number: 4 (lower is better) Translates to: SLSTFIGVPGCWLAEQAEGRSPV*VFWWCL Trigger: CAGGCACCACCAGAAGACGCACACGGGCGAGCGGCC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | AGAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTaGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACC | + |
Preference number: 4 (lower is better) Translates to: RVCGGHEDSLQE*VLFLYHVGPGT Trigger: GGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCGGCGGGAGCTCTTGTaGGCTGGCCGCTTGTGGTCG | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQRRELL*AGRLWS Trigger: CGACCACAAGCGGCCAGCCCACAAGAGCTCCCGCCG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGGCTTCTCGCCCCGGTaGGTTCTTTGGTGCACGATG | + |
Preference number: 4 (lower is better) Translates to: STSSHPADESAGQHHIYHGFSPR*VLWCTM Trigger: CATCGTGCACCAAAGAACTCACCGGGGCGAGAAGCC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCGTGTGGGACCGGAAGTaGTCAGCCAGGGCTGACTTC | + |
Preference number: 4 (lower is better) Translates to: DESAGQHHIYHYRASLCAVWDRK*SARADF Trigger: GAAGTCAGCCCTGGCTGAGCACTTCCGGTCCCACAC...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTCTTCCCTCTGTGAATaGCCTGATGCGCCACCAGGG | + |
Preference number: 4 (lower is better) Translates to: SSPTDFTQPTDIEALCLVSSLCE*PDAPPG Trigger: CCCTGGTGGCGCATCAGGTCATTCACAGAGGGAAGA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCCTCTTGTGCACGGTaGAGGCCGACTTGTGGCGGA | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQSSCAR*RPTCGG Trigger: TCCGCCACAAGTCGGCCTTCACCGTGCACAAGAGGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTGCGTCTTCTGGTGGTaGCTGAGAGCTGACTTCCTG | + |
Preference number: 4 (lower is better) Translates to: SLSTFIGVPGCWLAEQAECVFWW*LRADFL Trigger: CAGGAAGTCAGCTCTCAGGCACCACCAGAAGACGCA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | GCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTaGCAGTTTTATAGTGCATCACCTGACTCCATACCC | + |
Preference number: 4 (lower is better) Translates to: ALLEEVGHWGWA*QFYSASPDSIP Trigger: GGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACTTCTCAGATGCACGTTaGGGGCCGACTGACAGAAGA | + |
Preference number: 4 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDFSDAR*GPTDRR Trigger: TCTTCTGTCAGTCGGCCCTCAACGTGCATCTGAGAA...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCTGTCAGCCTTGGTGTaGAGAGCTGGCTTTCCTCGC | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQLSALV*RAGFPR Trigger: GCGAGGAAAGCCAGCTCTGCACACCAAGGCTGACAG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAACTCCTTACACTCGTTaGGCTTCTCGCCCCGGTGAG | + |
Preference number: 4 (lower is better) Translates to: RRQTCTVRRNRRSEDRSKTPYTR*ASRPGE Trigger: CTCACCGGGGCGAGAAGCCCAACGAGTGTAAGGAGT...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGACCCGTGTGGATCCTCTaGTGTGCTGTCAGGGCGGAC | + |
Preference number: 4 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRPVWIL*CAVRAD Trigger: GTCCGCCCTGACAGCACACCAGAGGATCCACACGGG...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGTGTGCGTCTTCTGGTaGTGCCTGAGAGCTGACTTC | + |
Preference number: 4 (lower is better) Translates to: STSSHPADESAGQHHIYHVCVFW*CLRADF Trigger: GAAGTCAGCTCTCAGGCACCACCAGAAGACGCACAC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCCACAGCCAAGTCCTTaGAGGAGATTGATCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: SSPTDFTQPTDIEALCLVPQPSP*RRLISG Trigger: CCCAGAGATCAATCTCCTTCAAGGACTTGGCTGTGG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCTCGGAGGGCTGACTTaGAGACTGCGTATTCTGTTG | + |
Preference number: 4 (lower is better) Translates to: SSPTDFTQPTDIEALCLVLGGLT*RLRILL Trigger: CAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTCCGGAAGAAGGTCTTaGCACACTCGTTACACTCGT | + |
Preference number: 4 (lower is better) Translates to: SLSTFIGVPGCWLAEQAESGRRS*HTRYTR Trigger: ACGAGTGTAACGAGTGTGGCAAGACCTTCTTCCGGA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCCAGGGCAGACTTGGTaGACAGATACTTCCCACACA | + |
Preference number: 4 (lower is better) Translates to: DESAGQHHIYHYRASLCAPGQTW*TDTSHT Trigger: TGTGTGGGAAGTATCTGTGCACCAAGTCTGCCCTGG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCTGCTCGCTGCAGTTaGGCTTCGCAGCGGATGCTC | + |
Preference number: 4 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRSARCS*ASQRML Trigger: GAGCATCCGCTGCGAAGCCCAACTGCAGCGAGCAGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | GTGTCTGAATGCTTGGTCCCCACCTGCTGGTGCTGTTaGGCAGGTTATAGAATACAGGAGGTGGAGCCTTAC | + |
Preference number: 4 (lower is better) Translates to: VSECLVPTCWCC*AGYRIQEVEPY Trigger: GTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCGTCCTTGAAGGAGATTaGTCTCTGGGTACTGTCCAT | + |
Preference number: 4 (lower is better) Translates to: DESAGQHHIYHYRASLCAVLEGD*SLGTVH Trigger: ATGGACAGTACCCAGAGATCAATCTCCTTCAAGGAC...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAGGGCAGACTTGTCGATaGAGGCTTTGCCACACTCCT | + |
Preference number: 4 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRGQTCR*RLCHTP Trigger: AGGAGTGTGGCAAAGCCTTCATCGACAAGTCTGCCC...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCTTCTGGTGGTGCCTaGGAGCTGACTTCCTGCAGT | + |
Preference number: 4 (lower is better) Translates to: LHKTAHQHPLQGAGSFLRSSGGA*ELTSCS Trigger: ACTGCAGGAAGTCAGCTCTCAGGCACCACCAGAAGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTAAGGCCTCTCCCATATaGTTCTCTTGTGCGCGAAGC | + |
Preference number: 4 (lower is better) Translates to: TLKTALLSVCLGRQPTYSKASPI*FSCARS Trigger: GCTTCGCGCACAAGAGAACCATATGGGAGAGGCCTT...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGGTGAAGGAGACCTTTTaGCAGAAGGTCTTCCCACAC | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQVKETF*QKVFPH Trigger: GTGTGGGAAGACCTTCTGCCAAAAGGTCTCCTTCAC...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCCCGTGTGTATTTTCTaGTGTTCAGTCAGCGTCCAG | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQPVCIF*CSVSVQ Trigger: CTGGACGCTGACTGAACACCAGAAAATACACACGGG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | AGACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTaGCCTACAGTCACACCTCTGTGTATATACACATAC | + |
Preference number: 4 (lower is better) Translates to: RHGLSHATASPQ*PTVTPLCIYTY Trigger: GTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTTCTGGTTTGCTCACATaGAGCCCCACCGCGATGAGG | + |
Preference number: 4 (lower is better) Translates to: KHGVRLRVPIMSLQPLILSGLLT*SPTAMR Trigger: CCTCATCGCGGTGGGGCTTCATGTGAGCAAACCAGA...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTGTGCTCAGCCAGGGCTaGCTTCCGGAAGAAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: KHGVRLRVPIMSLQPLILVLSQG*LPEEGL Trigger: AAGACCTTCTTCCGGAAGTCAGCCCTGGCTGAGCAC...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGCAGGGCTCTTTTCCTTaGTCCAGTTTTAAGATCACA | + |
Preference number: 4 (lower is better) Translates to: SLSTFIGVPGCWLAEQAEQGSFP*SSFKIT Trigger: TGTGATCTTAAAACTGGAGCAAGGAAAAGAGCCCTG...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGTGTCGAGTGAGGCTTaGCTTTATACGGAAAGTTTT | + |
Preference number: 4 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDVSSEA*LYTESF Trigger: AAAACTTTCCGTATAAAGGCAAGCCTCACTCGACAC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCTTGCCAAAGGCGTTaGCACACTCCTTGCATTTGT | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQSCQRR*HTPCIC Trigger: ACAAATGCAAGGAGTGTGGCAACGCCTTTGGCAAGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCATCATCTTCTGCGTaGTTCTGTCGTGACAAGTTT | + |
Preference number: 4 (lower is better) Translates to: CAAGDTPLSGLLEACSQKSSSSA*FCRDKF Trigger: AAACTTGTCACGACAGAACCACGCAGAAGATGATGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCAGCTACTTTCCCATTaGCTTTGCTTGGCTTTGCAA | + |
Preference number: 4 (lower is better) Translates to: DESAGQHHIYHYRASLCAQLLSH*LCLALQ Trigger: TTGCAAAGCCAAGCAAAGCCAATGGGAAAGTAGCTG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGTATGGATTCTCAGGTaGACAATGAGAGTGGACCTC | + |
Preference number: 4 (lower is better) Translates to: SHTSVYIHIHGRRAGCKSVWILR*TMRVDL Trigger: GAGGTCCACTCTCATTGTCCACCTGAGAATCCATAC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACCCGTGTGCGTCTTCTaGTGGTGCCTGAGAGCTGAC | + |
Preference number: 4 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQPVCVF*WCLRAD Trigger: GTCAGCTCTCAGGCACCACCAGAAGACGCACACGGG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | CTGAACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTaGCTTGCTAATCCTTGTCAGGCCTCTATCAGTAAT | + |
Preference number: 4 (lower is better) Translates to: LNSGCQACQQAP*LANPCQASISN Trigger: ATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR GCA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTTTTCCTACAGTAATTaGAGGCGTAGGGTCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: SSPTDFTQPTDIEALCLVFSYSN*RRRVFL Trigger: GAGAAAGACCCTACGCCTGCAATTACTGTAGGAAAA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | AAAACAACTTTAAAAACTGCACTGTTGTCTGTGTGCTaGGGACGGCAGCCCACGTACAGTCAGAGGACAGTC | + |
Preference number: 4 (lower is better) Translates to: KTTLKTALLSVC*GRQPTYSQRTV Trigger: GACTGTCCTCTGACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGTTGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTG | + |
Preference number: 4 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQRFAAE*LLSALV Trigger: CACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTGACTTCTGTCAGCCTTaGTGTGCAGAGCTGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: KHGVRLRVPIMSLQPLILDFCQP*CAELAF Trigger: GAAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTC...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR TCA 90 bp | TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATAAACACTATTCATGTTaGGAGGAACTGTTTTCTCAG | + |
Preference number: 4 (lower is better) Translates to: STSSHPADESAGQHHIYHKHYSC*EELFSQ Trigger: CTGAGAAAACAGTTCCTCTCAACATGAATAGTGTTT...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTTTTCTCAGACAGATTaGCCTTTTCCAGCATTGGTT | + |
Preference number: 4 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQFSQTD*PFPALV Trigger: AACCAATGCTGGAAAAGGCCAATCTGTCTGAGAAAA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | ACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTTGCTaGCTAATCCTTGTCAGGCCTCTATCAGTAATTTTA | + |
Preference number: 4 (lower is better) Translates to: TRVVRLASKHLC*LILVRPLSVIL Trigger: TAAAATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | TTGTATGGAACACTCACTCGCATCATGTGCCTGGCTTaGTCATTTGACGTTCACATTTTCTTCCTGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: LYGTLTRIMCLA*SFDVHIFFLAA Trigger: AGCAGCCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CCA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGGTCTTTCTCCGGTATaGATTCTCAGGTGGACAATG | + |
Preference number: 4 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQGLSPV*ILRWTM Trigger: CATTGTCCACCTGAGAATCCATACCGGAGAAAGACC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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3UTR CAA 72 bp | TTTGGTTTTGCTATGGTAACTGCGGTCACTGTTTTCTaGGCTTACATGGAAGCTCAAGGAGGCACTTACAAG | + |
Preference number: 4 (lower is better) Translates to: FGFAMVTAVTVF*AYMEAQGGTYK Trigger: CTTGTAAGTGCCTCCTTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCGCAGTTACCATAGCAAAACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 90 bp | ATTCCGCTTCCGCTCAGGCTGCTCCTCCGACCTCGCAGCGCCGGCTaGCTCCTGTTCACCTTCACGATGCTCGGAGGGCTGACTTGCAGA | + |
Preference number: 5 (lower is better) Translates to: IPLPLRLLLRPRSAG*LLFTFTMLGGLTCR Trigger: TCTGCAAGTCAGCCCTCCGAGCATCGTGAAGGTGAACAGGAGTCAGCCGGCGCTGCGAGGTCGGAGGAGCAGCCTGAGCGGAAGCGGAAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS GCA 90 bp | GGCGTCCGCCCTCTTCTGCTCGCTGCAGTTGGGCTTCGCAGCGGATaGTCGGCTCCACTTACTAAGCAAGCCATGCTTCTCTCCTGTGTG | + |
Preference number: 5 (lower is better) Translates to: GVRPLLLAAVGLRSG*SAPLTKQAMLLSCV Trigger: CACACAGGAGAGAAGCATGGCTTGCTTAGTAAGTGGAGCCGAGCATCCGCTGCGAAGCCCAACTGCAGCGAGCAGAAGAGGGCGGACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCCGGTGTGGATCCTCTaGTGCACGGTGAAGGCCGAC | + |
Preference number: 5 (lower is better) Translates to: IFSYLRAQHHKRRQQTGQPVWIL*CTVKAD Trigger: GTCGGCCTTCACCGTGCACAAGAGGATCCACACCGG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCTTCCGGAAGAAGGTCTaGCCACACTCGTTACACTCG | + |
Preference number: 5 (lower is better) Translates to: DESAGQHHIYHYRASLCAFRKKV*PHSLHS Trigger: CGAGTGTAACGAGTGTGGCAAGACCTTCTTCCGGAA...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTTCTTGCCAAAGGCGTaGCCACACTCCTTGCATTTG | + |
Preference number: 5 (lower is better) Translates to: SLSTFIGVPGCWLAEQAEFLPKA*PHSLHL Trigger: CAAATGCAAGGAGTGTGGCAACGCCTTTGGCAAGAA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 90 bp | TTGACATCCCTAACTTCATTACGTCTGTACCGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTGTGCAGAGCTGGCTTTCCTCGCCCA | + |
Preference number: 5 (lower is better) Translates to: LTSLTSLRLYRFAAE*LLSALVCRAGFPRP Trigger: TGGGCGAGGAAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACGGTACAGACGTAATGAAGTTAGGGATGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAATGAGGTACGACTTCTaGCCAAAGGCGTTGCCACAC | + |
Preference number: 5 (lower is better) Translates to: RRQTCTVRRNRRSEDRSKMRYDF*PKALPH Trigger: GTGTGGCAACGCCTTTGGCAAGAAGTCGTACCTCAT...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGTTTTCTCAGACAGATaGGCCTTTTCCAGCATTGGT | + |
Preference number: 5 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDVFSDR*AFSSIG Trigger: ACCAATGCTGGAAAAGGCCAATCTGTCTGAGAAAAC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAGCAGCTACTTTCCCATaGGCTTTGCTTGGCTTTGCA | + |
Preference number: 5 (lower is better) Translates to: RRQTCTVRRNRRSEDRSKAATFP*ALLGFA Trigger: TGCAAAGCCAAGCAAAGCCAATGGGAAAGTAGCTGC...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTCGTGAAGGAGACCTTTaGGCAGAAGGTCTTCCCACA | + |
Preference number: 5 (lower is better) Translates to: TLKTALLSVCLGRQPTYSREGDL*AEGLPT Trigger: TGTGGGAAGACCTTCTGCCAAAAGGTCTCCTTCACG...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACTTTTCCAGCATTGGTTaGCTATTGACGACTGAAAAC | + |
Preference number: 5 (lower is better) Translates to: SYLRAQHHKRRQQTGQSDFSSIG*LLTTEN Trigger: GTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAA...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCTTCAAATGTTTGTCTaGTGTTTTCTTGTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: SSPTDFTQPTDIEALCLVLQMFV*CFLVLL Trigger: GAGAAGGACAAGAAAACACAAGACAAACATTTGAAG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCAACTGCTTCAAATGTTaGTCTTGTGTTTTCTTGTCC | + |
Preference number: 5 (lower is better) Translates to: DESAGQHHIYHYRASLCANCFKC*SCVFLS Trigger: GGACAAGAAAACACAAGACAAACATTTGAAGCAGTT...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACC | + |
Preference number: 5 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQRLRIL*LSETLT Trigger: GGTGAGGGTCTCACTCAACAACAGAATACGCAGTCT...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTAAGAGGAAGTTTGATTaGTGGCGAAATGACTTCTTA | + |
Preference number: 5 (lower is better) Translates to: TLKTALLSVCLGRQPTYSKRKFD*WRNDFL Trigger: TAAGAAGTCATTTCGCCACAAATCAAACTTCCTCTT...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 90 bp | CTCAGACAGATTGGCCTTTTCCAGCATTGGTTTGCTATTGACGACTaGAAACTGCTTCAAATGTTTGTCTTGTGTTTTCTTGTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: LRQIGLFQHWFAIDD*KLLQMFVLCFLVLL Trigger: GAGAAGGACAAGAAAACACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAATCTGTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS-3UTR CAA 90 bp | GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGATGTAAGAGGAAGTTaGATTTGTGGCGAAATGACT | + |
Preference number: 5 (lower is better) Translates to: VTKLRSTSTGPFLFRYTQDVRGS*ICGEMT Trigger: AGTCATTTCGCCACAAATCAAACTTCCTCTTACATC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS CAA 72 bp | CTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTTGTaGAGTGAGACCCTCACCTTGACCCTTGACATCCCT | + |
Preference number: 6 (lower is better) Translates to: LGGLTCRLRILL*SETLTLTLDIP Trigger: AGGGATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS CAA 72 bp | ATGCTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACCTTGACCCTTGACATC | + |
Preference number: 6 (lower is better) Translates to: MLGGLTCRLRIL*LSETLTLTLDI Trigger: GATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS CAA 90 bp | ACCTTCACGATGCTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACCTTGACCCTTGACATCCCTAACTTC | + |
Preference number: 6 (lower is better) Translates to: TFTMLGGLTCRLRIL*LSETLTLTLDIPNF Trigger: GAAGTTAGGGATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAGCATCGTGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 72 bp | CTAACTTCATTACGTCTGTACCGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTGTGCAGAGCTGGCTTT | + |
Preference number: 6 (lower is better) Translates to: LTSLRLYRFAAE*LLSALVCRAGF Trigger: AAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACGGTACAGACGTAATGAAGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS CCA 72 bp | TTCTTGTCCTTCTCTAAGGGCTCATCATCTTCTGCGTaGTTCTGTCGTGACAAGTTTTCCACTACCCAGGGC | + |
Preference number: 6 (lower is better) Translates to: FLSFSKGSSSSA*FCRDKFSTTQG Trigger: GCCCTGGGTAGTGGAAAACTTGTCACGACAGAACCACGCAGAAGATGATGAGCCCTTAGAGAAGGACAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS CAA 72 bp | TCAGACAGATTGGCCTTTTCCAGCATTGGTTTGCTATaGACGACTGAAAACTGCTTCAAATGTTTGTCTTGT | + |
Preference number: 6 (lower is better) Translates to: SDRLAFSSIGLL*TTENCFKCLSC Trigger: ACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAATCTGTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 72 bp | TATGGAGTGTTTTTCCCGAAGAAACACTATTCATGTTaGGAGGAACTGTTTTCTCAGACAGATTGGCCTTTT | + |
Preference number: 6 (lower is better) Translates to: YGVFFPKKHYSC*EELFSQTDWPF Trigger: AAAAGGCCAATCTGTCTGAGAAAACAGTTCCTCTCAACATGAATAGTGTTTCTTCGGGAAAAACACTCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |
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CDS TCA 72 bp | ATTGGCCTTTTCCAGCATTGGTTTGCTATTGACGACTaGAAACTGCTTCAAATGTTTGTCTTGTGTTTTCTT | + |
Preference number: 6 (lower is better) Translates to: IGLFQHWFAIDD*KLLQMFVLCFL Trigger: AAGAAAACACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103084.4 |