RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP334 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000017667

Ensembl transcript IDs: ENSMUST00000103084.4

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTCGGCAGGGAGGTCCAGGGCTGCAGCTTTCACCACCCGAGCTaGAGGGGGATTTTGATAAAGCAGCTGCTTCTGGGCCATCCTGCT +
Preference number: 1 (lower is better)
Translates to: RLGREVQGCSFHHPS*RGILIKQLLLGHPA
Trigger: AGCAGGATGGCCCAGAAGCAGCTGCTTTATCAAAATCCCCCTCCAGCTCGGGTGGTGAAAGCTGCAGCCCTGGACCTCCCTGCCGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CCAGCGGTCAGAAGGGAGCAGGCTCGCAGCACTGGGCCTGACAGGTaGGCTGAGAACCGTCACACTCTTCTGATCAGTGTGATGGGTTCT +
Preference number: 1 (lower is better)
Translates to: PAVRREQARSTGPDR*AENRHTLLISVMGS
Trigger: AGAACCCATCACACTGATCAGAAGAGTGTGACGGTTCTCAGCTCACCTGTCAGGCCCAGTGCTGCGAGCCTGCTCCCTTCTGACCGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp GACACGAGGACAGCTTGCAGGAGTTGGTTCTCTTCCTGTACCATGTaGGTCCCGGGACCAAACACAGGTTGTCTGGCTTGGTGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: DTRTACRSWFSSCTM*VPGPNTGCLAWWQV
Trigger: CACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp TCCCCACCTGCTGGTGCTGTTTGGCAGGTTATAGAATACAGGAGGTaGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTGCA +
Preference number: 1 (lower is better)
Translates to: SPPAGAVWQVIEYRR*SLTGGSGSLGVGLA
Trigger: TGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 90 bp TTGTGTATTTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCA +
Preference number: 1 (lower is better)
Translates to: LCIWGPECVGDTRTA*RSWFSSCTMWVPGP
Trigger: TGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAAATACACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 90 bp GAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTaGAGTTTTATAGTGCATCACCTGACTCCATACCCTGGCTACCAG +
Preference number: 1 (lower is better)
Translates to: EVEPYWRKWVTGGGP*SFIVHHLTPYPGYQ
Trigger: CTGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp AATACAGGAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTaGGCCTTGCAGTTTTATAGTGCATCACCTGACTCCATACCCTGG +
Preference number: 1 (lower is better)
Translates to: NTGGGALLEEVGHWG*ALQFYSASPDSIPW
Trigger: CCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp GAGAGCAGGGCTGGCTCCCAGGACCTGACATTAACCCACCACGAATaGCAGACATTCTGGCTAGATGCACATATCCACACTACGTCATTC +
Preference number: 1 (lower is better)
Translates to: ESRAGSQDLTLTHHE*QTFWLDAHIHTTSF
Trigger: GAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTCCTGGGAGCCAGCCCTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp CCTGACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATaGAGGACTGTGTACCTCTGGAACTGTGAGCCAAACCTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: PDSIPWLPASTSSLP*RTVYLWNCEPNLFS
Trigger: GGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CCATGCCAAGGGCTGATTTGCCAGCTTAACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCCTTCTCACTTCATTGTCCTAGGAAA +
Preference number: 1 (lower is better)
Translates to: PCQGLICQLNHRQGP*QDTQWPFSLHCPRK
Trigger: TTTCCTAGGACAATGAAGTGAGAAGGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTGGTTAAGCTGGCAAATCAGCCCTTGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 90 bp GAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAACTCACTGCCCCAAATAGAACTTCCT +
Preference number: 1 (lower is better)
Translates to: ESAGQHHIYHYRASL*ARLQLNSLPQIELP
Trigger: AGGAAGTTCTATTTGGGGCAGTGAGTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTaGCACTCATTATCAAAACTAAGCTGGACAACACAACTTACGGCA +
Preference number: 1 (lower is better)
Translates to: PKSPTPQAEAADRSE*HSLSKLSWTTQLTA
Trigger: TGCCGTAAGTTGTGTTGTCCAGCTTAGTTTTGATAATGAGTGTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 90 bp GGACCTGACATTAACCCACCACGAATGGCAGACATTCTGGCTAGATaGACATATCCACACTACGTCATTCTATTTGGCACCATGGAGACG +
Preference number: 1 (lower is better)
Translates to: GPDINPPRMADILAR*TYPHYVILFGTMET
Trigger: CGTCTCCATGGTGCCAAATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp TCCTTCCATCCTTCTTATCTGGGAGGAGGAAGCCTCTTAACAGATTaGCCTGTAGAGAATTTTCTCGATGTGTGCCCAGCTCATTGGGAG +
Preference number: 1 (lower is better)
Translates to: SFHPSYLGGGSLLTD*PVENFLDVCPAHWE
Trigger: CTCCCAATGAGCTGGGCACACATCGAGAAAATTCTCTACAGGCCAATCTGTTAAGAGGCTTCCTCCTCCCAGATAAGAAGGATGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp CTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTaGAACTGTGAGCCAAACCTTTTCTCCCTTCACTTGCCTTTAAAG +
Preference number: 1 (lower is better)
Translates to: LPASTSSLPWRTVYL*NCEPNLFSLHLPLK
Trigger: CTTTAAAGGCAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp GTCCTTCCAGTCTCCACTCTAACTTGGGTCAAGTTGTTCAGTGTCTaGGAGTGTGACACCACAGATGGTTTCACTTGTATGGAACACTCA +
Preference number: 1 (lower is better)
Translates to: VLPVSTLTWVKLFSV*ECDTTDGFTCMEHS
Trigger: TGAGTGTTCCATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGAGTGGAGACTGGAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 90 bp CACTGGCTTACCGAGCTGGACTTCAGTGTAATTGTTACTTTGGCCTaGCATACTTTCTTTCCTAGGGTGTGTTGCATCTCCCCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: HWLTELDFSVIVTLA*HTFFPRVCCISPVK
Trigger: TTTTACTGGGGAGATGCAACACACCCTAGGAAAGAAAGTATGCCAGGCCAAAGTAACAATTACACTGAAGTCCAGCTCGGTAAGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CTCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTGGAACTGTaGGCCAAACCTTTTCTCCCTTCACTTGCCTTTAAAGGATACTTT +
Preference number: 1 (lower is better)
Translates to: LYIFLAMEDCVPLEL*AKPFLPSLAFKGYF
Trigger: AAAGTATCCTTTAAAGGCAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CACTGGACCCTCAAGTGTCACTCTGATGTGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTTCCATTTATGGACTTAAATATTTCT +
Preference number: 1 (lower is better)
Translates to: HWTLKCHSDVSCDFL*LGLSDLPFMDLNIS
Trigger: AGAAATATTTAAGTCCATAAATGGAAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGACACATCAGAGTGACACTTGAGGGTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 90 bp CTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTTCAATGTaGCCTTACGGAATAAGGCTTTTACAGATGCCAATCAACATGAGG +
Preference number: 1 (lower is better)
Translates to: LRVPIMSLQPLILSM*PYGIRLLQMPINMR
Trigger: CCTCATGTTGATTGGCATCTGTAAAAGCCTTATTCCGTAAGGTCACATTGAAAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp TTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTaGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCAAACACAGG +
Preference number: 2 (lower is better)
Translates to: LGTRVCGGHEDSLQE*VLFLYHVGPGTKHR
Trigger: CCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGGTCAGAGGACAGTCCTaGGGAGCCGGGTCTCGCTGT +
Preference number: 2 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVVRGQS*GAGSRC
Trigger: ACAGCGAGACCCGGCTCCGCAGGACTGTCCTCTGAC...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp CTTGTGTATTTGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTaGCAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACC +
Preference number: 2 (lower is better)
Translates to: LVYLGTRVCGGHEDS*QELVLFLYHVGPGT
Trigger: GGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCAAATACACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDHRQGP*QDTQWP
Trigger: GGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTG...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp CGAGGCCTGAGACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTaGCCTACAGTCACACCTCTGTGTATATACACATACACGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RGLRHGLSHATASPQ*PTVTPLCIYTYTAG
Trigger: GCCTGCCGTGTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTCTCAGGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp GGAGGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTaGCAGTTTTATAGTGCATCACCTGACTCCATACCCTGGCTACCA +
Preference number: 2 (lower is better)
Translates to: GGGALLEEVGHWGWA*QFYSASPDSIPWLP
Trigger: TGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGCCTGTTCCAGCTCCTaGCTCCAGGTTCTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHACSSS*LQVLPS
Trigger: TGAGGGCAGAACCTGGAGGCAGGAGCTGGAACAGGC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVYRASL*ARLQLN
Trigger: GTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGTTTGTTCCGTGGTTTaGAAGGGAGGCAGGCACACC +
Preference number: 2 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAEVCSVV*KGGRHT
Trigger: GGTGTGCCTGCCTCCCTTTCAAACCACGGAACAAAC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTGGCTTGGTGGCAGGTaGTGTTACCCCACACCATCT +
Preference number: 2 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVWLGGR*CYPTPS
Trigger: AGATGGTGTGGGGTAACATCACCTGCCACCAAGCCA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp TTGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCAAACACAGGTaGTCTGGCTTGGTGGCAGGTGATGTTACCCCACACCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: LVLFLYHVGPGTKHR*SGLVAGDVTPHHLE
Trigger: TTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATATAGGTGTCCCGGGTTaGTGGCTTGCAGAACAAGCG +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHIGVPG*WLAEQA
Trigger: CGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTAT...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCTTCCTGTACCATGTaGGTCCCGGGACCAAACACA +
Preference number: 2 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKSSCTM*VPGPNT
Trigger: TGTGTTTGGTCCCGGGACCCACATGGTACAGGAAGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGCCTGCTCTAAGAGAATaGCTACTCTCTGCCTCACGG +
Preference number: 2 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVPALRE*LLSASR
Trigger: CCGTGAGGCAGAGAGTAGCCATTCTCTTAGAGCAGG...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGGGACATCCAGATATCTaGTGGCCAGAGAGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKGHPDI*WPESPV
Trigger: AACAGGGCTCTCTGGCCACCAGATATCTGGATGTCC...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp GCATCACCTGACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTaGCCATGGAGGACTGTGTACCTCTGGAACTGTGAGCCAAACCTT +
Preference number: 2 (lower is better)
Translates to: ASPDSIPWLPASTSS*PWRTVYLWNCEPNL
Trigger: AAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGGTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTGCCAAGGGCTGATTTaGCAGCTTAACCACAGGCAA +
Preference number: 2 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAECQGLI*QLNHRQ
Trigger: TTGCCTGTGGTTAAGCTGGCAAATCAGCCCTTGGCA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATCAGAGACGACAGACATaGACAGTGAGGAGGAACAGG +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHQRRQT*TVRRNR
Trigger: CCTGTTCCTCCTCACTGTGCATGTCTGTCGTCTCTG...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTCATACTGGGATTTCTaGTGGGTCTCAAACAAGGGG +
Preference number: 2 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAESYWDF*WVSNKG
Trigger: CCCCTTGTTTGAGACCCATCAGAAATCCCAGTATGA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTT +
Preference number: 2 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKSCDFL*LGLSDL
Trigger: AAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTGATGAGATCGCCAAGTaGTTTCAACATGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVDEIAK*FQHGLL
Trigger: CAGCAGCCCATGTTGAAATCACTTGGCGATCTCATC...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGCCAGCAAGCACCTTTaGTTGCTAATCCTTGTCAGG +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHASKHL*LLILVR
Trigger: CCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SHTSVYIHIHGRRAGCKSDTRTA*RSWFSS
Trigger: GGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTTAGTGTTTGTTCCGTaGTTTGAAAGGGAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVLVFVP*FEREAG
Trigger: GCCTGCCTCCCTTTCAAACCACGGAACAAACACTAA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCTTACCCCACACCATCTaGAAGCCCCTCAGAGTCTTT +
Preference number: 2 (lower is better)
Translates to: DESAGQHHIYHYRASLCALPHTI*KPLRVF
Trigger: AAAGACTCTGAGGGGCTTCCAGATGGTGTGGGGTAA...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGACAGAAGCAAAACCTaGAGTTGCATTGCCACAAGC +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHDRSKT*SCIATS
Trigger: GCTTGTGGCAATGCAACTTCAGGTTTTGCTTCTGTC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATCTCGGCTTTAGCAAATaGTTACTGCTGTGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: STSSHPADESAGQHHIYHLGFSK*LLLCGS
Trigger: ACTCCCACACAGCAGTAAGCATTTGCTAAAGCCGAG...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGACATTCTGGCTAGATaGACATATCCACACTACGTC +
Preference number: 2 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDDILAR*TYPHYV
Trigger: GACGTAGTGTGGATATGTGCATCTAGCCAGAATGTC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGCGGTCACTGTTTTCTTaGCTTACATGGAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKRSLFS*LTWKLK
Trigger: CTTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCG...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAATCAGAGAGCAGGGCTaGCTCCCAGGACCTGACATT +
Preference number: 2 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRIREQG*LPGPDI
Trigger: AATGTCAGGTCCTGGGAGCCAGCCCTGCTCTCTGAT...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTACAGCTTGCAGGAGTTaGTTCTCTTCCTGTACCATG +
Preference number: 2 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVTACRS*FSSCTM
Trigger: CATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGT...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTACTGGGCCTGACAGGTaGGCTGAGAACCGTCACACT +
Preference number: 2 (lower is better)
Translates to: KHGVRLRVPIMSLQPLILTGPDR*AENRHT
Trigger: AGTGTGACGGTTCTCAGCTCACCTGTCAGGCCCAGT...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCGGGTTGTCAGGCTTaGCAGCAAGCACCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRSGCQA*QQAPLL
Trigger: AAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAATGCTTACTGCTGTGTaGGAGTCGCTACAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRMLTAV*ESLQVG
Trigger: CCCTACCTGTAGCGACTCCCACACAGCAGTAAGCAT...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp ACGGAAGGTCTGAACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTaGCTTGCTAATCCTTGTCAGGCCTCTATCAGTAATTTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: TEGLNSGCQACQQAP*LANPCQASISNFKS
Trigger: GCTTTTAAAATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 90 bp TTCCTTCCATCCTTCTTATCTGGGAGGAGGAAGCCTCTTAACAGATaGGCCTGTAGAGAATTTTCTCGATGTGTGCCCAGCTCATTGGGA +
Preference number: 2 (lower is better)
Translates to: FLPSFLSGRRKPLNR*ACREFSRCVPSSLG
Trigger: TCCCAATGAGCTGGGCACACATCGAGAAAATTCTCTACAGGCCAATCTGTTAAGAGGCTTCCTCCTCCCAGATAAGAAGGATGGAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGAAGGGTGGCTCGGCTaGCTCACCTTTGCAGATGAA +
Preference number: 2 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQEGWLG*LTFADE
Trigger: TTCATCTGCAAAGGTGAGTCAGCCGAGCCACCCTTC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCTTCATTTTTGGTTTTaGTATGGTAACTGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: DESAGQHHIYHYRASLCALHFWF*YGNCGH
Trigger: GTGACCGCAGTTACCATAGCAAAACCAAAAATGAAG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGAGTAAGTATAGGGAATaGACTTTGACAAGTGTGGTA +
Preference number: 2 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKSKYRE*TLTSVV
Trigger: TACCACACTTGTCAAAGTGCATTCCCTATACTTACT...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCGTTTTCTCAGAAGCTaGCAGGTAAATTCTAAATCA +
Preference number: 2 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVRFLRS*QVNSKS
Trigger: TGATTTAGAATTTACCTGTCAGCTTCTGAGAAAACG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTTTTTCTTGGCTTACATaGAAGCTCAAGGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: TLKTALLSVCLGRQPTYSFSWLT*KLKEAL
Trigger: AAGTGCCTCCTTGAGCTTCCATGTAAGCCAAGAAAA...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGATTTGTCTCATAAGTaGCAAGCAGAAGGCACAATT +
Preference number: 2 (lower is better)
Translates to: SHTSVYIHIHGRRAGCKSDLSHK*QAEGTI
Trigger: AATTGTGCCTTCTGCTTGCCACTTATGAGACAAATC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCATGTCCTGATAAAATaGAAACATAGACAGACATCC +
Preference number: 2 (lower is better)
Translates to: DESAGQHHIYHYRASLCAHVLIK*KHRQTS
Trigger: GGATGTCTGTCTATGTTTCCATTTTATCAGGACATG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCAAAATACATTTATGCTaGGTAGTAATGGCAGCACAC +
Preference number: 2 (lower is better)
Translates to: DESAGQHHIYHYRASLCAKIHLC*VVMAAH
Trigger: GTGTGCTGCCATTACTACCCAGCATAAATGTATTTT...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR TCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTTATTAGAAAACCAATaGCTCGGCTTTAGCAAATGC +
Preference number: 2 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQLLENQ*LGFSKC
Trigger: GCATTTGCTAAAGCCGAGTCATTGGTTTTCTAATAA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGACTACGTCATTCTATTTaGCACCATGGAGACGTTTTC +
Preference number: 2 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRLRHSI*HHGDVF
Trigger: GAAAACGTCTCCATGGTGCCAAATAGAATGACGTAG...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACAACTGGTAATGATCTaGAATCAACACTGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQQLVMI*NQHWPH
Trigger: GTGAGGCCAGTGTTGATTCCAGATCATTACCAGTTG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR GCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAATTACAAGCCACCTTGTaGCTCTTATTAGAAAACCAA +
Preference number: 2 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQLQATL*LLLENQ
Trigger: TTGGTTTTCTAATAAGAGGCACAAGGTGGCTTGTAA...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGAAAGAGTTTCCAATTaGCACATAAACATGCAATTG +
Preference number: 2 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQERVSN*HINMQL
Trigger: CAATTGCATGTTTATGTGCCAATTGGAAACTCTTTC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GGTGGCCAGAGAGCCCTGTTGATAATAGTCCCTGTGTaGGGGGCGTTCTGTGGGGTCTGCAGGCATCAGGTG +
Preference number: 3 (lower is better)
Translates to: GGQRALLIIVPV*GAFCGVCRHQV
Trigger: CACCTGATGCCTGCAGACCCCACAGAACGCCCCCCACACAGGGACTATTATCAACAGGGCTCTCTGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTTaGTTCTCTTCCTGTACCATGTGGGTCCCGGGACCA +
Preference number: 3 (lower is better)
Translates to: ECVGDTRTACRS*FSSCTMWVPGP
Trigger: TGGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGCTGTTGTCTGTGTGCTaGGGACGGCAGCCCACGTAC +
Preference number: 3 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKLLSVC*GRQPTY
Trigger: GTACGTGGGCTGCCGTCCCAAGCACACAGACAACAG...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp CGGGACCAAACACAGGTTGTCTGGCTTGGTGGCAGGTaGTGTTACCCCACACCATCTGGAAGCCCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: RDQTQVVWLGGR*CYPTPSGSPSE
Trigger: CTCTGAGGGGCTTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAGACAACCTGTGTTTGGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp TGGGGACCAGAGTGTGTGGGGGACACGAGGACAGCTTaGAGGAGTTGGTTCTCTTCCTGTACCATGTGGGTC +
Preference number: 3 (lower is better)
Translates to: WGPECVGDTRTA*RSWFSSCTMWV
Trigger: GACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCTGGTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp GGACCTGAGAGAGCTCAAACCCCAGCAGAGAGTCACTaGCTGGGACATCCAGATATCTGGTGGCCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: GPERAQTPAESH*LGHPDIWWPES
Trigger: GCTCTCTGGCCACCAGATATCTGGATGTCCCAGTCAGTGACTCTCTGCTGGGGTTTGAGCTCTCTCAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp AGCAAGCAGCGCTCCTCCATGGCCTGTTCCAGCTCCTaGCTCCAGGTTCTGCCCTCATTTACCATAGGTACA +
Preference number: 3 (lower is better)
Translates to: SKQRSSMACSSS*LQVLPSFTIGT
Trigger: TGTACCTATGGTAAATGAGGGCAGAACCTGGAGGCAGGAGCTGGAACAGGCCATGGAGGAGCGCTGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp CTGAGAGAGCTCAAACCCCAGCAGAGAGTCACTGACTaGGACATCCAGATATCTGGTGGCCAGAGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: LRELKPQQRVTD*DIQISGGQRAL
Trigger: CAGGGCTCTCTGGCCACCAGATATCTGGATGTCCCAGTCAGTGACTCTCTGCTGGGGTTTGAGCTCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GGTGGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTaGGCCTTGCAGTTTTATAGTGCATCACCTGACTCC +
Preference number: 3 (lower is better)
Translates to: GGALLEEVGHWG*ALQFYSASPDS
Trigger: GGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GCTGGTGCTGTTTGGCAGGTTATAGAATACAGGAGGTaGAGCCTTACTGGAGGAAGTGGGTCACTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: AGAVWQVIEYRR*SLTGGSGSLGV
Trigger: CACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTATAGGTGTCCCGGGTaGCTGGCTTGCAGAACAAGC +
Preference number: 3 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVYRCPG*LACRTS
Trigger: GCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGGAGGCAGCTGTGCCTTaGGAGTTAGAGTCAGCAATG +
Preference number: 3 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKEAAVP*ELESAM
Trigger: CATTGCTGACTCTAACTCCAAAGGCACAGCTGCCTC...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp CGTGAGACGGAAGGTCTGAACTCGGGTTGTCAGGCTTaGCAGCAAGCACCTTTGCTTGCTAATCCTTGTCAG +
Preference number: 3 (lower is better)
Translates to: RETEGLNSGCQA*QQAPLLANPCQ
Trigger: CTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGTCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp GGGCAACACCACATCTATCATTATAGGGCCTCCCTGTaGGCCAGACTCCAGCTCAACTCACTGCCCCAAATA +
Preference number: 3 (lower is better)
Translates to: GQHHIYHYRASL*ARLQLNSLPQI
Trigger: TATTTGGGGCAGTGAGTTGAGCTGGAGTCTGGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp CCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTTaGAGTTTTATAGTGCATCACCTGACTCCATACCCT +
Preference number: 3 (lower is better)
Translates to: PYWRKWVTGGGP*SFIVHHLTPYP
Trigger: AGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GGTTGCTGGCTTGCAGAACAAGCGGAGTCCTCTCACTaGACCCTCAAGTGTCACTCTGATGTGTCTTGTGAC +
Preference number: 3 (lower is better)
Translates to: GCWLAEQAESSH*TLKCHSDVSCD
Trigger: GTCACAAGACACATCAGAGTGACACTTGAGGGTCCAGTGAGAGGACTCCGCTTGTTCTGCAAGCCAGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GCCCCTCAGAGTCTTTATAGATGCAGTAATAATCGCTaGGGAAGGAGACTAGCCAGTCAGGCTGCTGAGCCG +
Preference number: 3 (lower is better)
Translates to: APQSLYRCSNNR*GRRLASQAAEP
Trigger: CGGCTCAGCAGCCTGACTGGCTAGTCTCCTTCCCCAGCGATTATTACTGCATCTATAAAGACTCTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp GGGCTGATTTGCCAGCTTAACCACAGGCAAGGCCCATaGCAAGATACCCAGTGGCCCTTCTCACTTCATTGT +
Preference number: 3 (lower is better)
Translates to: GLICQLNHRQGP*QDTQWPFSLHC
Trigger: ACAATGAAGTGAGAAGGGCCACTGGGTATCTTGTCATGGGCCTTGCCTGTGGTTAAGCTGGCAAATCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp AGTGGTACTCAGTCCTCAGCCCTCTCTAGTACATTCTaGGCTGATGGGACAGCTTTGAGGGGGAACTTCGTG +
Preference number: 3 (lower is better)
Translates to: SGTQSSALSSTF*ADGTALRGNFV
Trigger: CACGAAGTTCCCCCTCAAAGCTGTCCCATCAGCTCAGAATGTACTAGAGAGGGCTGAGGACTGAGTACCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp ATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATaGAGGACTGTGTACCTCTGGAACTGTGAGCCAAAC +
Preference number: 3 (lower is better)
Translates to: IPWLPASTSSLP*RTVYLWNCEPN
Trigger: GTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCGGCTGACTCACCTTaGCAGATGAAGGGATTAGGG +
Preference number: 3 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQSADSP*QMKGLG
Trigger: CCCTAATCCCTTCATCTGCAAAGGTGAGTCAGCCGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGCGGTCACTGTTTTCTaGGCTTACATGGAAGCTCAA +
Preference number: 3 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAEAVTVF*AYMEAQ
Trigger: TTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCGC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp ACTGTATGCAGTCAGTGGACAGTGTCAGCGCATTCCTaGAAACAACAGGGCACTCTAAGGCATCGCATGAAG +
Preference number: 3 (lower is better)
Translates to: TVCSQWTVSAHS*KQQGTLRHRMK
Trigger: CTTCATGCGATGCCTTAGAGTGCCCTGTTGTTTGCAGGAATGCGCTGACACTGTCCACTGACTGCATACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp GACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTTaGCTACAGTCACACCTCTGTGTATATACACATACA +
Preference number: 3 (lower is better)
Translates to: DTGSVMPQLPHS*LQSHLCVYTHT
Trigger: TGTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp GCTAATGTGTCTGAATGCTTGGTCCCCACCTGCTGGTaGTGTTTGGCAGGTTATAGAATACAGGAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: ANVSECLVPTCW*CLAGYRIQEVE
Trigger: CTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACACATTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp ACTGCCCAGTTATCCCAGGAACAACTGGTAATGATCTaGAATCAACACTGGCCTCACGCCCACATCATACGC +
Preference number: 3 (lower is better)
Translates to: TAQLSQEQLVMI*NQHWPHAHIIR
Trigger: GCGTATGATGTGGGCGTGAGGCCAGTGTTGATTCCAGATCATTACCAGTTGTTCCTGGGATAACTGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TATAGAATACAGGAGGTGGAGCCTTACTGGAGGAAGTaGGTCACTGGGGGTGGGCCTTGCAGTTTTATAGTG +
Preference number: 3 (lower is better)
Translates to: YRIQEVEPYWRK*VTGGGPCSFIV
Trigger: CACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGCTCCACCTCCTGTATTCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TGTCTGAATGCTTGGTCCCCACCTGCTGGTGCTGTTTaGCAGGTTATAGAATACAGGAGGTGGAGCCTTACT +
Preference number: 3 (lower is better)
Translates to: CLNAWSPPAGAV*QVIEYRRWSLT
Trigger: AGTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACAACACAGACACTGTTTaGACTCAAACACTCCCCAAA +
Preference number: 3 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDNTDTV*TQTLPK
Trigger: TTTGGGGAGTGTTTGAGTCAAAACAGTGTCTGTGTT...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp AGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAACCTaGAGTTGCATTGCCACAAGCTGTAGGAAGACCACA +
Preference number: 3 (lower is better)
Translates to: RRNRRSEDRSKT*SCIATSCRKTT
Trigger: TGTGGTCTTCCTACAGCTTGTGGCAATGCAACTTCAGGTTTTGCTTCTGTCCTCACTACGCCTGTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp CGTTCTGTGGGGTCTGCAGGCATCAGGTGCAGCTTTTaGACACTTCACACTAGATGTGAAGGATCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: RSVGSAGIRCSF*TLHTRCEGSAV
Trigger: TACAGCAGATCCTTCACATCTAGTGTGAAGTGTTCAAAAGCTGCACCTGATGCCTGCAGACCCCACAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp CCACACCATCTGGAAGCCCCTCAGAGTCTTTATAGATaGAGTAATAATCGCTGGGGAAGGAGACTAGCCAGT +
Preference number: 3 (lower is better)
Translates to: PHHLEAPQSLYR*SNNRWGRRLAS
Trigger: ACTGGCTAGTCTCCTTCCCCAGCGATTATTACTGCATCTATAAAGACTCTGAGGGGCTTCCAGATGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp CTGGCTTGGTGGCAGGTGATGTTACCCCACACCATCTaGAAGCCCCTCAGAGTCTTTATAGATGCAGTAATA +
Preference number: 3 (lower is better)
Translates to: LAWWQVMLPHTI*KPLRVFIDAVI
Trigger: TATTACTGCATCTATAAAGACTCTGAGGGGCTTCCAGATGGTGTGGGGTAACATCACCTGCCACCAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TTCCAAAGGACCAGAGTTCAATACCCAGCATCCGCATaGCAGCTCACAACTGTAATCCCAGTTCCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: FQRTRVQYPASA*QLTTVIPVPED
Trigger: ATCCTCTGGAACTGGGATTACAGTTGTGAGCTGCCATGCGGATGCTGGGTATTGAACTCTGGTCCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TTGCAGTTTTATAGTGCATCACCTGACTCCATACCCTaGCTACCAGCCTCTACATCTTCCTTGCCATGGAGG +
Preference number: 3 (lower is better)
Translates to: LQFYSASPDSIP*LPASTSSLPWR
Trigger: CCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTCAGGTGATGCACTATAAAACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp AAAATCAGTTCTCTCTATTACGTGAGACGGAAGGTCTaGACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTT +
Preference number: 3 (lower is better)
Translates to: KISSLYYVRRKV*TRVVRLASKHL
Trigger: AAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAGACCTTCCGTCTCACGTAATAGAGAGAACTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp AACACTCACTCGCATCATGTGCCTGGCTTTGTCATTTaGCGTTCACATTTTCTTCCTGGCTGCTCGGTCTGT +
Preference number: 3 (lower is better)
Translates to: NTHSHHVPGFVI*RSHFLPGCSVC
Trigger: ACAGACCGAGCAGCCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp AAACTCACCTCCTGCTCTAAGAGAATGGCTACTCTCTaGCTCACGGGCAGAATAGGAGCAATTACAACAGCA +
Preference number: 3 (lower is better)
Translates to: KLTSCSKRMATL*LTGRIGAITTA
Trigger: TGCTGTTGTAATTGCTCCTATTCTGCCCGTGAGGCAGAGAGTAGCCATTCTCTTAGAGCAGGAGGTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp CACTTCACACTAGATGTGAAGGATCTGCTGTATAGGTaGAAGCCAAGGCTTTCCCAAGTAGTCCCACTGACT +
Preference number: 3 (lower is better)
Translates to: HFTLDVKDLLYR*KPRLSQVVPLT
Trigger: AGTCAGTGGGACTACTTGGGAAAGCCTTGGCTTCCACCTATACAGCAGATCCTTCACATCTAGTGTGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TCTACATCTTCCTTGCCATGGAGGACTGTGTACCTCTaGAACTGTGAGCCAAACCTTTTCTCCCTTCACTTG +
Preference number: 3 (lower is better)
Translates to: STSSLPWRTVYL*NCEPNLFSLHL
Trigger: CAAGTGAAGGGAGAAAAGGTTTGGCTCACAGTTCCAGAGGTACACAGTCCTCCATGGCAAGGAAGATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp GACTCCATACCCTGGCTACCAGCCTCTACATCTTCCTTGCCATGGAGGACTGTGTATAGGGAATGCACTTaGACAAGTGTGGTAAAAATG +
Preference number: 3 (lower is better)
Translates to: DSIPWLPASTSSLPWRTVYRECT*TSVVKM
Trigger: CATTTTTACCACACTTGTCAAAGTGCATTCCCTATA...CACAGTCCTCCATGGCAAGGAAGATGTAGAGGCTGGTAGCCAGGGTATGGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp GTCTCCACTCTAACTTGGGTCAAGTTGTTCAGTGTCTaGGAGTGTGACACCACAGATGGTTTCACTTGTATG +
Preference number: 3 (lower is better)
Translates to: VSTLTWVKLFSV*ECDTTDGFTCM
Trigger: CATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGAGTGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp ATTAACCCACCACGAATGGCAGACATTCTGGCTAGATaGACATATCCACACTACGTCATTCTATTTGGCACC +
Preference number: 3 (lower is better)
Translates to: INPPRMADILAR*TYPHYVILFGT
Trigger: GGTGCCAAATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp TTTAAAACAACTTTAAAAACTGCACTGTTGTCTGTGTaGTTGGGACGGCAGCCCACGTACAGTCAGAGGACA +
Preference number: 3 (lower is better)
Translates to: FKTTLKTALLSV*LGRQPTYSQRT
Trigger: TGTCCTCTGACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGTTGTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp ACAACTGCATACAGTACCCAGCCTGGTGCCTCTCTCTaGCATAGCATATTGTACTGGTCTATAGCTTGTAAT +
Preference number: 3 (lower is better)
Translates to: TTAYSTQPGASL*HSILYWSIACN
Trigger: ATTACAAGCTATAGACCAGTACAATATGCTATGGCAGAGAGAGGCACCAGGCTGGGTACTGTATGCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp GACCTGACATTAACCCACCACGAATGGCAGACATTCTaGCTAGATGCACATATCCACACTACGTCATTCTAT +
Preference number: 3 (lower is better)
Translates to: DLTLTHHEWQTF*LDAHIHTTSFY
Trigger: ATAGAATGACGTAGTGTGGATATGTGCATCTAGCCAGAATGTCTGCCATTCGTGGTGGGTTAATGTCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp CCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTaGGAGTTTTCTAAGACCAAGCGAAGAAAAGTAAGT +
Preference number: 3 (lower is better)
Translates to: PQDSSPTSSTRS*EFSKTKRRKVS
Trigger: ACTTACTTTTCTTCGCTTGGTCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR-3UTR CAA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAATTAAAAACTGCACTGTaGTCTGTGTGCTTGGGACGG +
Preference number: 3 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQLKTAL*SVCLGR
Trigger: CCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAA...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp TTACAAGCCACCTTGTGCCTCTTATTAGAAAACCAATaGCTCGGCTTTAGCAAATGCTTACTGCTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: LQATLCLLLENQ*LGFSKCLLLCG
Trigger: CCCACACAGCAGTAAGCATTTGCTAAAGCCGAGTCATTGGTTTTCTAATAAGAGGCACAAGGTGGCTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp CTCAAGTGTCACTCTGATGTGTCTTGTGACTTTCTGTaGTTGGGGCTCTCTGACCTTCCATTTATGGACTTA +
Preference number: 3 (lower is better)
Translates to: LKCHSDVSCDFL*LGLSDLPFMDL
Trigger: TAAGTCCATAAATGGAAGGTCAGAGAGCCCCAATCACAGAAAGTCACAAGACACATCAGAGTGACACTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp TCTAACTTGGGTCAAGTTGTTCAGTGTCTGAGAGTGTaGCACCACAGATGGTTTCACTTGTATGGAACACTC +
Preference number: 3 (lower is better)
Translates to: SNLGQVVQCLRV*HHRWFHLYGTL
Trigger: GAGTGTTCCATACAAGTGAAACCATCTGTGGTGTCACACTCTCAGACACTGAACAACTTGACCCAAGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp GAAAAACTCCTATACCCTCGGATTGTGGCTTGTTTATaGGACGTCTCCCATAGGCTAATGTGTCTGAATGCT +
Preference number: 3 (lower is better)
Translates to: EKLLYPRIVACL*DVSHRLMCLNA
Trigger: AGCATTCAGACACATTAGCCTATGGGAGACGTCTCATAAACAAGCCACAATCCGAGGGTATAGGAGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CCA 72 bp TTCACTTGTATGGAACACTCACTCGCATCATGTGCCTaGCTTTGTCATTTGACGTTCACATTTTCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: FTCMEHSLASCA*LCHLTFTFSSW
Trigger: CCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp ACTTTGGCCTGGCATACTTTCTTTCCTAGGGTGTGTTaGATCTCCCCAGTAAAAGTCTCACACAACAAATAT +
Preference number: 3 (lower is better)
Translates to: TLAWHTFFPRVC*ISPVKVSHNKY
Trigger: ATATTTGTTGTGTGAGACTTTTACTGGGGAGATGCAACACACCCTAGGAAAGAAAGTATGCCAGGCCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR GCA 72 bp TGGTTTCACTTGTATGGAACACTCACTCGCATCATGTaGCTGGCTTTGTCATTTGACGTTCACATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: WFHLYGTLTRIM*LALSFDVHIFF
Trigger: GAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAAGTGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp CCAATAATGTCCCTCCAGCCTCTAATACTTTCAATGTaGCCTTACGGAATAAGGCTTTTACAGATGCCAATC +
Preference number: 3 (lower is better)
Translates to: PIMSLQPLILSM*PYGIRLLQMPI
Trigger: GATTGGCATCTGTAAAAGCCTTATTCCGTAAGGTCACATTGAAAGTATTAGAGGCTGGAGGGACATTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp TTCTATTTGGCACCATGGAGACGTTTTCTCAGAAGCTaGCAGGTAAATTCTAAATCATACCCCTATGGACAT +
Preference number: 3 (lower is better)
Translates to: FYLAPWRRFLRS*QVNSKSYPYGH
Trigger: ATGTCCATAGGGGTATGATTTAGAATTTACCTGTCAGCTTCTGAGAAAACGTCTCCATGGTGCCAAATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp AGAGTTTCCAATTGGCACATAAACATGCAATTGCCCTaGTCTTTAACCCTTCATTTGGATGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: RVSNWHINMQLP*SLTLHLDVCVC
Trigger: ACACACACACACATCCAAATGAAGGGTTAAAGATCAGGGCAATTGCATGTTTATGTGCCAATTGGAAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR TCA 72 bp ACAGGGCACTCTAAGGCATCGCATGAAGACATTAGCTaGGAAAATAGACACTTTCCTAAATATCCAAAGACT +
Preference number: 3 (lower is better)
Translates to: TGHSKASHEDIS*ENRHFPKYPKT
Trigger: AGTCTTTGGATATTTAGGAAAGTGTCTATTTTCTCAGCTAATGTCTTCATGCGATGCCTTAGAGTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGGGCCGCTCGCCCGTGTaGGTCTTCTGGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAEGRSPV*VFWWCL
Trigger: CAGGCACCACCAGAAGACGCACACGGGCGAGCGGCC...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp AGAGTGTGTGGGGGACACGAGGACAGCTTGCAGGAGTaGGTTCTCTTCCTGTACCATGTGGGTCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: RVCGGHEDSLQE*VLFLYHVGPGT
Trigger: GGTCCCGGGACCCACATGGTACAGGAAGAGAACCAACTCCTGCAAGCTGTCCTCGTGTCCCCCACACACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCGGCGGGAGCTCTTGTaGGCTGGCCGCTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQRRELL*AGRLWS
Trigger: CGACCACAAGCGGCCAGCCCACAAGAGCTCCCGCCG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGGCTTCTCGCCCCGGTaGGTTCTTTGGTGCACGATG +
Preference number: 4 (lower is better)
Translates to: STSSHPADESAGQHHIYHGFSPR*VLWCTM
Trigger: CATCGTGCACCAAAGAACTCACCGGGGCGAGAAGCC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCGTGTGGGACCGGAAGTaGTCAGCCAGGGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: DESAGQHHIYHYRASLCAVWDRK*SARADF
Trigger: GAAGTCAGCCCTGGCTGAGCACTTCCGGTCCCACAC...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTCTTCCCTCTGTGAATaGCCTGATGCGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVSSLCE*PDAPPG
Trigger: CCCTGGTGGCGCATCAGGTCATTCACAGAGGGAAGA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCCTCTTGTGCACGGTaGAGGCCGACTTGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQSSCAR*RPTCGG
Trigger: TCCGCCACAAGTCGGCCTTCACCGTGCACAAGAGGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTGCGTCTTCTGGTGGTaGCTGAGAGCTGACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAECVFWW*LRADFL
Trigger: CAGGAAGTCAGCTCTCAGGCACCACCAGAAGACGCA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp GCCTTACTGGAGGAAGTGGGTCACTGGGGGTGGGCCTaGCAGTTTTATAGTGCATCACCTGACTCCATACCC +
Preference number: 4 (lower is better)
Translates to: ALLEEVGHWGWA*QFYSASPDSIP
Trigger: GGGTATGGAGTCAGGTGATGCACTATAAAACTGCAAGGCCCACCCCCAGTGACCCACTTCCTCCAGTAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACTTCTCAGATGCACGTTaGGGGCCGACTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDFSDAR*GPTDRR
Trigger: TCTTCTGTCAGTCGGCCCTCAACGTGCATCTGAGAA...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCTGTCAGCCTTGGTGTaGAGAGCTGGCTTTCCTCGC +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQLSALV*RAGFPR
Trigger: GCGAGGAAAGCCAGCTCTGCACACCAAGGCTGACAG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAACTCCTTACACTCGTTaGGCTTCTCGCCCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RRQTCTVRRNRRSEDRSKTPYTR*ASRPGE
Trigger: CTCACCGGGGCGAGAAGCCCAACGAGTGTAAGGAGT...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGACCCGTGTGGATCCTCTaGTGTGCTGTCAGGGCGGAC +
Preference number: 4 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRPVWIL*CAVRAD
Trigger: GTCCGCCCTGACAGCACACCAGAGGATCCACACGGG...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATGTGTGCGTCTTCTGGTaGTGCCTGAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: STSSHPADESAGQHHIYHVCVFW*CLRADF
Trigger: GAAGTCAGCTCTCAGGCACCACCAGAAGACGCACAC...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCCACAGCCAAGTCCTTaGAGGAGATTGATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVPQPSP*RRLISG
Trigger: CCCAGAGATCAATCTCCTTCAAGGACTTGGCTGTGG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCTCGGAGGGCTGACTTaGAGACTGCGTATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVLGGLT*RLRILL
Trigger: CAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTCCGGAAGAAGGTCTTaGCACACTCGTTACACTCGT +
Preference number: 4 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAESGRRS*HTRYTR
Trigger: ACGAGTGTAACGAGTGTGGCAAGACCTTCTTCCGGA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCCAGGGCAGACTTGGTaGACAGATACTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: DESAGQHHIYHYRASLCAPGQTW*TDTSHT
Trigger: TGTGTGGGAAGTATCTGTGCACCAAGTCTGCCCTGG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCTGCTCGCTGCAGTTaGGCTTCGCAGCGGATGCTC +
Preference number: 4 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRSARCS*ASQRML
Trigger: GAGCATCCGCTGCGAAGCCCAACTGCAGCGAGCAGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp GTGTCTGAATGCTTGGTCCCCACCTGCTGGTGCTGTTaGGCAGGTTATAGAATACAGGAGGTGGAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: VSECLVPTCWCC*AGYRIQEVEPY
Trigger: GTAAGGCTCCACCTCCTGTATTCTATAACCTGCCAAACAGCACCAGCAGGTGGGGACCAAGCATTCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCGTCCTTGAAGGAGATTaGTCTCTGGGTACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DESAGQHHIYHYRASLCAVLEGD*SLGTVH
Trigger: ATGGACAGTACCCAGAGATCAATCTCCTTCAAGGAC...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGAGGGCAGACTTGTCGATaGAGGCTTTGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRGQTCR*RLCHTP
Trigger: AGGAGTGTGGCAAAGCCTTCATCGACAAGTCTGCCC...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp CTCCACAAGACAGCTCACCAACATCCTCTACAAGGAGCTGGGAGTTTTCTAAGATCTTCTGGTGGTGCCTaGGAGCTGACTTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LHKTAHQHPLQGAGSFLRSSGGA*ELTSCS
Trigger: ACTGCAGGAAGTCAGCTCTCAGGCACCACCAGAAGA...TCTTAGAAAACTCCCAGCTCCTTGTAGAGGATGTTGGTGAGCTGTCTTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTAAGGCCTCTCCCATATaGTTCTCTTGTGCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: TLKTALLSVCLGRQPTYSKASPI*FSCARS
Trigger: GCTTCGCGCACAAGAGAACCATATGGGAGAGGCCTT...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGGTGAAGGAGACCTTTTaGCAGAAGGTCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQVKETF*QKVFPH
Trigger: GTGTGGGAAGACCTTCTGCCAAAAGGTCTCCTTCAC...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCCCGTGTGTATTTTCTaGTGTTCAGTCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQPVCIF*CSVSVQ
Trigger: CTGGACGCTGACTGAACACCAGAAAATACACACGGG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp AGACACGGGCTCAGTCATGCCACAGCTTCCCCACAGTaGCCTACAGTCACACCTCTGTGTATATACACATAC +
Preference number: 4 (lower is better)
Translates to: RHGLSHATASPQ*PTVTPLCIYTY
Trigger: GTATGTGTATATACACAGAGGTGTGACTGTAGGCAACTGTGGGGAAGCTGTGGCATGACTGAGCCCGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTTCTGGTTTGCTCACATaGAGCCCCACCGCGATGAGG +
Preference number: 4 (lower is better)
Translates to: KHGVRLRVPIMSLQPLILSGLLT*SPTAMR
Trigger: CCTCATCGCGGTGGGGCTTCATGTGAGCAAACCAGA...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTGTGCTCAGCCAGGGCTaGCTTCCGGAAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KHGVRLRVPIMSLQPLILVLSQG*LPEEGL
Trigger: AAGACCTTCTTCCGGAAGTCAGCCCTGGCTGAGCAC...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGCAGGGCTCTTTTCCTTaGTCCAGTTTTAAGATCACA +
Preference number: 4 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAEQGSFP*SSFKIT
Trigger: TGTGATCTTAAAACTGGAGCAAGGAAAAGAGCCCTG...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGTGTCGAGTGAGGCTTaGCTTTATACGGAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDVSSEA*LYTESF
Trigger: AAAACTTTCCGTATAAAGGCAAGCCTCACTCGACAC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTCTTGCCAAAGGCGTTaGCACACTCCTTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQSCQRR*HTPCIC
Trigger: ACAAATGCAAGGAGTGTGGCAACGCCTTTGGCAAGA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp TGTGCAGCAGGTGACACTCCACTCTCTGGCCTTCTGGAAGCATGCTCTCAGAAGTCATCATCTTCTGCGTaGTTCTGTCGTGACAAGTTT +
Preference number: 4 (lower is better)
Translates to: CAAGDTPLSGLLEACSQKSSSSA*FCRDKF
Trigger: AAACTTGTCACGACAGAACCACGCAGAAGATGATGA...CTTCTGAGAGCATGCTTCCAGAAGGCCAGAGAGTGGAGTGTCACCTGCTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCCAGCTACTTTCCCATTaGCTTTGCTTGGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: DESAGQHHIYHYRASLCAQLLSH*LCLALQ
Trigger: TTGCAAAGCCAAGCAAAGCCAATGGGAAAGTAGCTG...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp AGTCACACCTCTGTGTATATACACATACACGGCAGGCGGGCAGGCTGTAAGTCTGTATGGATTCTCAGGTaGACAATGAGAGTGGACCTC +
Preference number: 4 (lower is better)
Translates to: SHTSVYIHIHGRRAGCKSVWILR*TMRVDL
Trigger: GAGGTCCACTCTCATTGTCCACCTGAGAATCCATAC...AGACTTACAGCCTGCCCGCCTGCCGTGTATGTGTATATACACAGAGGTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACCCGTGTGCGTCTTCTaGTGGTGCCTGAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQPVCVF*WCLRAD
Trigger: GTCAGCTCTCAGGCACCACCAGAAGACGCACACGGG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp CTGAACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTaGCTTGCTAATCCTTGTCAGGCCTCTATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LNSGCQACQQAP*LANPCQASISN
Trigger: ATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR GCA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTTTTTCCTACAGTAATTaGAGGCGTAGGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVFSYSN*RRRVFL
Trigger: GAGAAAGACCCTACGCCTGCAATTACTGTAGGAAAA...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp AAAACAACTTTAAAAACTGCACTGTTGTCTGTGTGCTaGGGACGGCAGCCCACGTACAGTCAGAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: KTTLKTALLSVC*GRQPTYSQRTV
Trigger: GACTGTCCTCTGACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAACGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQRFAAE*LLSALV
Trigger: CACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACG...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp AAACATGGGGTACGTCTTAGGGTACCAATAATGTCCCTCCAGCCTCTAATACTTGACTTCTGTCAGCCTTaGTGTGCAGAGCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: KHGVRLRVPIMSLQPLILDFCQP*CAELAF
Trigger: GAAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTC...AAGTATTAGAGGCTGGAGGGACATTATTGGTACCCTAAGACGTACCCCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR TCA 90 bp TCCACAAGCTCCCACCCTGCGGATGAATCAGCAGGGCAACACCACATCTATCATAAACACTATTCATGTTaGGAGGAACTGTTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: STSSHPADESAGQHHIYHKHYSC*EELFSQ
Trigger: CTGAGAAAACAGTTCCTCTCAACATGAATAGTGTTT...ATGATAGATGTGGTGTTGCCCTGCTGATTCATCCGCAGGGTGGGAGCTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGTTTTCTCAGACAGATTaGCCTTTTCCAGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQFSQTD*PFPALV
Trigger: AACCAATGCTGGAAAAGGCCAATCTGTCTGAGAAAA...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp ACTCGGGTTGTCAGGCTTGCCAGCAAGCACCTTTGCTaGCTAATCCTTGTCAGGCCTCTATCAGTAATTTTA +
Preference number: 4 (lower is better)
Translates to: TRVVRLASKHLC*LILVRPLSVIL
Trigger: TAAAATTACTGATAGAGGCCTGACAAGGATTAGCAAGCAAAGGTGCTTGCTGGCAAGCCTGACAACCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp TTGTATGGAACACTCACTCGCATCATGTGCCTGGCTTaGTCATTTGACGTTCACATTTTCTTCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYGTLTRIMCLA*SFDVHIFFLAA
Trigger: AGCAGCCAGGAAGAAAATGTGAACGTCAAATGACAAAGCCAGGCACATGATGCGAGTGAGTGTTCCATACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CCA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGGTCTTTCTCCGGTATaGATTCTCAGGTGGACAATG +
Preference number: 4 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQGLSPV*ILRWTM
Trigger: CATTGTCCACCTGAGAATCCATACCGGAGAAAGACC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
3UTR CAA 72 bp TTTGGTTTTGCTATGGTAACTGCGGTCACTGTTTTCTaGGCTTACATGGAAGCTCAAGGAGGCACTTACAAG +
Preference number: 4 (lower is better)
Translates to: FGFAMVTAVTVF*AYMEAQGGTYK
Trigger: CTTGTAAGTGCCTCCTTGAGCTTCCATGTAAGCCAAGAAAACAGTGACCGCAGTTACCATAGCAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 90 bp ATTCCGCTTCCGCTCAGGCTGCTCCTCCGACCTCGCAGCGCCGGCTaGCTCCTGTTCACCTTCACGATGCTCGGAGGGCTGACTTGCAGA +
Preference number: 5 (lower is better)
Translates to: IPLPLRLLLRPRSAG*LLFTFTMLGGLTCR
Trigger: TCTGCAAGTCAGCCCTCCGAGCATCGTGAAGGTGAACAGGAGTCAGCCGGCGCTGCGAGGTCGGAGGAGCAGCCTGAGCGGAAGCGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS GCA 90 bp GGCGTCCGCCCTCTTCTGCTCGCTGCAGTTGGGCTTCGCAGCGGATaGTCGGCTCCACTTACTAAGCAAGCCATGCTTCTCTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: GVRPLLLAAVGLRSG*SAPLTKQAMLLSCV
Trigger: CACACAGGAGAGAAGCATGGCTTGCTTAGTAAGTGGAGCCGAGCATCCGCTGCGAAGCCCAACTGCAGCGAGCAGAAGAGGGCGGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp ATCTTTTCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGCCGGTGTGGATCCTCTaGTGCACGGTGAAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: IFSYLRAQHHKRRQQTGQPVWIL*CTVKAD
Trigger: GTCGGCCTTCACCGTGCACAAGAGGATCCACACCGG...CTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGAAAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCTTCCGGAAGAAGGTCTaGCCACACTCGTTACACTCG +
Preference number: 5 (lower is better)
Translates to: DESAGQHHIYHYRASLCAFRKKV*PHSLHS
Trigger: CGAGTGTAACGAGTGTGGCAAGACCTTCTTCCGGAA...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp TCGCTGTCCACATTTATAGGTGTCCCGGGTTGCTGGCTTGCAGAACAAGCGGAGTTCTTGCCAAAGGCGTaGCCACACTCCTTGCATTTG +
Preference number: 5 (lower is better)
Translates to: SLSTFIGVPGCWLAEQAEFLPKA*PHSLHL
Trigger: CAAATGCAAGGAGTGTGGCAACGCCTTTGGCAAGAA...CTCCGCTTGTTCTGCAAGCCAGCAACCCGGGACACCTATAAATGTGGACAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 90 bp TTGACATCCCTAACTTCATTACGTCTGTACCGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTGTGCAGAGCTGGCTTTCCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LTSLTSLRLYRFAAE*LLSALVCRAGFPRP
Trigger: TGGGCGAGGAAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACGGTACAGACGTAATGAAGTTAGGGATGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAATGAGGTACGACTTCTaGCCAAAGGCGTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: RRQTCTVRRNRRSEDRSKMRYDF*PKALPH
Trigger: GTGTGGCAACGCCTTTGGCAAGAAGTCGTACCTCAT...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACGTTTTCTCAGACAGATaGGCCTTTTCCAGCATTGGT +
Preference number: 5 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDVFSDR*AFSSIG
Trigger: ACCAATGCTGGAAAAGGCCAATCTGTCTGAGAAAAC...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp AGACGACAGACATGCACAGTGAGGAGGAACAGGCGTAGTGAGGACAGAAGCAAAGCAGCTACTTTCCCATaGGCTTTGCTTGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: RRQTCTVRRNRRSEDRSKAATFP*ALLGFA
Trigger: TGCAAAGCCAAGCAAAGCCAATGGGAAAGTAGCTGC...TTTGCTTCTGTCCTCACTACGCCTGTTCCTCCTCACTGTGCATGTCTGTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTCGTGAAGGAGACCTTTaGGCAGAAGGTCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: TLKTALLSVCLGRQPTYSREGDL*AEGLPT
Trigger: TGTGGGAAGACCTTCTGCCAAAAGGTCTCCTTCACG...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp TCTTACCTAAGAGCCCAACACCACAAGCGGAGGCAGCAGACAGGTCAGAGTGACTTTTCCAGCATTGGTTaGCTATTGACGACTGAAAAC +
Preference number: 5 (lower is better)
Translates to: SYLRAQHHKRRQQTGQSDFSSIG*LLTTEN
Trigger: GTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAA...GTCACTCTGACCTGTCTGCTGCCTCCGCTTGTGGTGTTGGGCTCTTAGGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp AGTAGTCCCACTGACTTCACACAGCCCACAGACATAGAGGCGCTGTGCCTAGTTCTTCAAATGTTTGTCTaGTGTTTTCTTGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SSPTDFTQPTDIEALCLVLQMFV*CFLVLL
Trigger: GAGAAGGACAAGAAAACACAAGACAAACATTTGAAG...AACTAGGCACAGCGCCTCTATGTCTGTGGGCTGTGTGAAGTCAGTGGGACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp GATGAATCAGCAGGGCAACACCACATCTATCATTATAGGGCCTCCCTGTGCGCCAACTGCTTCAAATGTTaGTCTTGTGTTTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: DESAGQHHIYHYRASLCANCFKC*SCVFLS
Trigger: GGACAAGAAAACACAAGACAAACATTTGAAGCAGTT...GGCGCACAGGGAGGCCCTATAATGATAGATGTGGTGTTGCCCTGCTGATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACC +
Preference number: 5 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQRLRIL*LSETLT
Trigger: GGTGAGGGTCTCACTCAACAACAGAATACGCAGTCT...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp ACTTTAAAAACTGCACTGTTGTCTGTGTGCTTGGGACGGCAGCCCACGTACAGTAAGAGGAAGTTTGATTaGTGGCGAAATGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: TLKTALLSVCLGRQPTYSKRKFD*WRNDFL
Trigger: TAAGAAGTCATTTCGCCACAAATCAAACTTCCTCTT...ACTGTACGTGGGCTGCCGTCCCAAGCACACAGACAACAGTGCAGTTTTTAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 90 bp CTCAGACAGATTGGCCTTTTCCAGCATTGGTTTGCTATTGACGACTaGAAACTGCTTCAAATGTTTGTCTTGTGTTTTCTTGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LRQIGLFQHWFAIDD*KLLQMFVLCFLVLL
Trigger: GAGAAGGACAAGAAAACACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAATCTGTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS-3UTR CAA 90 bp GTAACTAAGTTGCGCAGCACCTCTACTGGGCCTTTTCTATTTAGATACACACAAGATGTAAGAGGAAGTTaGATTTGTGGCGAAATGACT +
Preference number: 5 (lower is better)
Translates to: VTKLRSTSTGPFLFRYTQDVRGS*ICGEMT
Trigger: AGTCATTTCGCCACAAATCAAACTTCCTCTTACATC...TTGTGTGTATCTAAATAGAAAAGGCCCAGTAGAGGTGCTGCGCAACTTAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS CAA 72 bp CTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTTGTaGAGTGAGACCCTCACCTTGACCCTTGACATCCCT +
Preference number: 6 (lower is better)
Translates to: LGGLTCRLRILL*SETLTLTLDIP
Trigger: AGGGATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS CAA 72 bp ATGCTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACCTTGACCCTTGACATC +
Preference number: 6 (lower is better)
Translates to: MLGGLTCRLRIL*LSETLTLTLDI
Trigger: GATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS CAA 90 bp ACCTTCACGATGCTCGGAGGGCTGACTTGCAGACTGCGTATTCTGTaGTTGAGTGAGACCCTCACCTTGACCCTTGACATCCCTAACTTC +
Preference number: 6 (lower is better)
Translates to: TFTMLGGLTCRLRIL*LSETLTLTLDIPNF
Trigger: GAAGTTAGGGATGTCAAGGGTCAAGGTGAGGGTCTCACTCAACAACAGAATACGCAGTCTGCAAGTCAGCCCTCCGAGCATCGTGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 72 bp CTAACTTCATTACGTCTGTACCGTTTTGCCGCAGAGTaGCTTCTGTCAGCCTTGGTGTGCAGAGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: LTSLRLYRFAAE*LLSALVCRAGF
Trigger: AAAGCCAGCTCTGCACACCAAGGCTGACAGAAGTCACTCTGCGGCAAAACGGTACAGACGTAATGAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS CCA 72 bp TTCTTGTCCTTCTCTAAGGGCTCATCATCTTCTGCGTaGTTCTGTCGTGACAAGTTTTCCACTACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: FLSFSKGSSSSA*FCRDKFSTTQG
Trigger: GCCCTGGGTAGTGGAAAACTTGTCACGACAGAACCACGCAGAAGATGATGAGCCCTTAGAGAAGGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS CAA 72 bp TCAGACAGATTGGCCTTTTCCAGCATTGGTTTGCTATaGACGACTGAAAACTGCTTCAAATGTTTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: SDRLAFSSIGLL*TTENCFKCLSC
Trigger: ACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAATCTGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 72 bp TATGGAGTGTTTTTCCCGAAGAAACACTATTCATGTTaGGAGGAACTGTTTTCTCAGACAGATTGGCCTTTT +
Preference number: 6 (lower is better)
Translates to: YGVFFPKKHYSC*EELFSQTDWPF
Trigger: AAAAGGCCAATCTGTCTGAGAAAACAGTTCCTCTCAACATGAATAGTGTTTCTTCGGGAAAAACACTCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4
CDS TCA 72 bp ATTGGCCTTTTCCAGCATTGGTTTGCTATTGACGACTaGAAACTGCTTCAAATGTTTGTCTTGTGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: IGLFQHWFAIDD*KLLQMFVLCFL
Trigger: AAGAAAACACAAGACAAACATTTGAAGCAGTTTTCAGTCGTCAATAGCAAACCAATGCTGGAAAAGGCCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000103084.4