Pregenerated sensors for ZFP329 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057894Ensembl transcript IDs: ENSMUST00000072222.8, ENSMUST00000108546.2, ENSMUST00000121215.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCAGGCCTACGACTGAAAATTGCCCAGGTTGCACTGGAAGTCATCTaGAACTCTCCCAACTCAAATCTCACCTTTCCCCCTTTAGTCAAA | + |
Preference number: 1 (lower is better) Translates to: SGLRLKIAQVALEVI*NSPNSNLTFPPLVK Trigger: TTTGACTAAAGGGGGAAAGGTGAGATTTGAGTTGGGAGAGTTCCAGATGACTTCCAGTGCAACCTGGGCAATTTTCAGTCGTAGGCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CCA 90 bp | ATCTCCATGTTGGAGGTAAAATCTGCTCTGGCACTGACACATTCTTaGGCTCCAGACATGCTTGATGAGGCTGAAATATGCCTCCTTCTT | + |
Preference number: 1 (lower is better) Translates to: ISMLEVKSALALTHS*APDMLDEAEICLLL Trigger: AAGAAGGAGGCATATTTCAGCCTCATCAAGCATGTCTGGAGCCCAAGAATGTGTCAGTGCCAGAGCAGATTTTACCTCCAACATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR TCA 90 bp | GACGGTGCTTTATTTCAGTGTATGCGCTACGTGTTTGGTATAGGCTaGATCATCCCTGAAGCCTTTCCTACATTGACTACCTTTCAGTCC | + |
Preference number: 1 (lower is better) Translates to: DGALFQCMRYVFGIG*IIPEAFPTLTTFQS Trigger: GGACTGAAAGGTAGTCAATGTAGGAAAGGCTTCAGGGATGATTCAGCCTATACCAAACACGTAGCGCATACACTGAAATAAAGCACCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR TCA 90 bp | AGAAAAGAGCAAGGGGAAACAGTTCACCCTCACACAAATCCCATGTaGACTTACTACAATTTCAGAGTTGACACCTCTTCCTTGCGGTGC | + |
Preference number: 1 (lower is better) Translates to: RKEQGETVHPHTNPM*TYYNFRVDTSSLRC Trigger: GCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTCACATGGGATTTGTGTGAGGGTGAACTGTTTCCCCTTGCTCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR GCA 90 bp | ATCCCATGTGAACTTACTACAATTTCAGAGTTGACACCTCTTCCTTaGGGTGCTTCCCTCAGGTTTCTTGTTCCAGAATCTGAAATGCAG | + |
Preference number: 1 (lower is better) Translates to: IPCELTTISELTPLP*GASLRFLVPESEMQ Trigger: CTGCATTTCAGATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTCACATGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR GCA 90 bp | CGTACTCCATACAGTTGTACAATTTCAGAGTTGACACCTCTTCCTTaGGGTGCTTCCCTCAGGTTTCTTGTTCCAGAATTGAATGACTTC | + |
Preference number: 1 (lower is better) Translates to: RTPYSCTISELTPLP*GASLRFLVPELNDF Trigger: GAAGTCATTCAATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTACAACTGTATGGAGTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121215.2 |
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3UTR GCA 90 bp | CTGCAAACACCTTGTTCTGCCTTCTGCTACAGTACCAACTCTTACTaGACGTACTCCATACAGTTGTACAATTTCAGAGTTGACACCTCT | + |
Preference number: 1 (lower is better) Translates to: LQTPCSAFCYSTNSY*TYSIQLYNFRVDTS Trigger: AGAGGTGTCAACTCTGAAATTGTACAACTGTATGGAGTACGTGCAGTAAGAGTTGGTACTGTAGCAGAAGGCAGAACAAGGTGTTTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121215.2 |
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3UTR TCA 90 bp | AGACGTCCCACCACTACGCCTTTATGGAAACAGGAAAGTACAAACTaGCAAAAGTGTCACTCCCAAATAACACTTCCAAGCTTTGACTCT | + |
Preference number: 1 (lower is better) Translates to: RRPTTTPLWKQESTN*QKCHSQITLPSFDS Trigger: AGAGTCAAAGCTTGGAAGTGTTATTTGGGAGTGACACTTTTGTCAGTTTGTACTTTCCTGTTTCCATAAAGGCGTAGTGGTGGGACGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR TCA 90 bp | ATATCCAAAATTCCAAAAGAAATGATTCTAGGCTTCGGGACGCTCTaGTTCCAGAGAAGCATCTGTCAGTATACACCTGGAGTTGCTTAT | + |
Preference number: 1 (lower is better) Translates to: ISKIPKEMILGFGTL*FQRSICQYTPGVAY Trigger: ATAAGCAACTCCAGGTGTATACTGACAGATGCTTCTCTGGAATCAGAGCGTCCCGAAGCCTAGAATCATTTCTTTTGGAATTTTGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR GCA 90 bp | AATGCAGTATCAAGAAGCAGGGACACTACTAACACTAATGGTACATaGATGTTTTACTTGAGAATAACAGACACCAAAGTGCTGCACCCT | + |
Preference number: 1 (lower is better) Translates to: NAVSRSRDTTNTNGT*MFYLRITDTKVLHP Trigger: AGGGTGCAGCACTTTGGTGTCTGTTATTCTCAAGTAAAACATGCATGTACCATTAGTGTTAGTAGTGTCCCTGCTTCTTGATACTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CCA 90 bp | AGGGCCACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTaGCAAATGCACAGTGAAAAGAGACTGGTGATTGACAGAGTCAGA | + |
Preference number: 1 (lower is better) Translates to: RATCLIFPLICNVKN*QMHSEKRLVIDRVR Trigger: TCTGACTCTGTCAATCACCAGTCTCTTTTCACTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTGGCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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3UTR TCA 90 bp | TATATATATAAAGAATTCTTTTCTGCGAGCAAGGGAAGTCACATCTaGAAACAAATCCTTTGTTCACTCAAGGACAGCATGGCCCATGTC | + |
Preference number: 1 (lower is better) Translates to: YIYKEFFSASKGSHI*KQILCSLKDSMAHV Trigger: GACATGGGCCATGCTGTCCTTGAGTGAACAAAGGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAGAAAAGAATTCTTTATATATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR CCA 90 bp | ATATTGTTCATTATAGAGACAATCTGTAAGCTACAAATGATTGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACC | + |
Preference number: 1 (lower is better) Translates to: ILFIIETICKLQMIV*CVCVCVCVCVCVYT Trigger: GGTATACACACACACACACACACACACACACACACACACACACCACACAATCATTTGTAGCTTACAGATTGTCTCTATAATGAACAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CCA 90 bp | GCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATTaGCACATGAGTTTGTATGTTTTTAGGACAGCACTATTCTTAGTA | + |
Preference number: 1 (lower is better) Translates to: AIPLLSIYPRVLKIY*HMSLYVFRTALFLV Trigger: TACTAAGAATAGTGCTGTCCTAAAAACATACAAACTCATGTGCCAATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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3UTR-3UTR TCA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATAAAATGCCTTCCTCGCTaGCGGTGCTTTATTTCAGTG | + |
Preference number: 2 (lower is better) Translates to: PIPFLSFTFLSGINHHLIKCLPR*RCFISV Trigger: CACTGAAATAAAGCACCGTCAGCGAGGAAGGCATTT...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR CAA 90 bp | TTCACCCTCACACAAATCCCATGTGAACTTACTACAATTTCAGAGTaGACACCTCTTCCTTGCGGTGCTTCCCTCAGGTTTCTTGTTCCA | + |
Preference number: 2 (lower is better) Translates to: FTLTQIPCELTTISE*TPLPCGASLRFLVP Trigger: TGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTCACATGGGATTTGTGTGAGGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CAA 90 bp | TGCTGTCTACCACTCTCTCTCTATCCCCATCATATGATAACCATCTaGCTGTCAAGGGCATGCATACAGAAGACTGAGATGTCTAACTTC | + |
Preference number: 2 (lower is better) Translates to: CCLPLSLYPHHMITI*LSRACIQKTEMSNF Trigger: GAAGTTAGACATCTCAGTCTTCTGTATGCATGCCCTTGACAGCAAGATGGTTATCATATGATGGGGATAGAGAGAGAGTGGTAGACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | TTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTCAGGCTGAATCATCCCTaGAGCCTTTCCTACATTGAC | + |
Preference number: 2 (lower is better) Translates to: FPVNGFTLAQSFVLHTCLRLNHP*SLSYID Trigger: GTCAATGTAGGAAAGGCTTCAGGGATGATTCAGCCT...GAGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR-3UTR TCA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATATGGTTACCTACTGAATaGCTTCACAGGTTCTTTCCA | + |
Preference number: 2 (lower is better) Translates to: PIPFLSFTFLSGINHHLIWLPTE*LHRFFP Trigger: TGGAAAGAACCTGTGAAGTCATTCAGTAGGTAACCA...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CAA 90 bp | TCCTGTAGCCATGATCTAGCCTTTGTAGGTTGTCTGACAGTATCTTaGGCCTCTATCCACTGGCAAAGATCTAAGAGACTCCAAATTTGT | + |
Preference number: 2 (lower is better) Translates to: SCSHDLAFVGCLTVS*ASIHWQRSKRLQIC Trigger: ACAAATTTGGAGTCTCTTAGATCTTTGCCAGTGGATAGAGGCCAAAGATACTGTCAGACAACCTACAAAGGCTAGATCATGGCTACAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR CCA 90 bp | AGCAAACAAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAGCACTGGAAGTCATCTaGAACTCTCCCAACTCAAAT | + |
Preference number: 2 (lower is better) Translates to: SKQRSSNSTPKHLPKSTEALEVI*NSPNSN Trigger: ATTTGAGTTGGGAGAGTTCCAGATGACTTCCAGTGC...TTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTTGTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | AGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTGAACACAGTTTAAAAGTGTTTGGTATAGGCTaGATCATCCCTGAAGCCTTT | + |
Preference number: 2 (lower is better) Translates to: SHRWLSSCSGNDIEHSLKVFGIG*IIPEAF Trigger: AAAGGCTTCAGGGATGATTCAGCCTATACCAAACAC...TTTTAAACTGTGTTCAATATCATTTCCGCTGCAACTACTCAGCCACCGATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | AACCAAGCAGACGGGGATGGGATTAAAGTTACAAGAAAGTTACTCTATCTTTTCAAATGCCTTCCTCGCTaGCGGTGCTTTATTTCAGTG | + |
Preference number: 2 (lower is better) Translates to: NQADGDGIKVTRKLLYLFKCLPR*RCFISV Trigger: CACTGAAATAAAGCACCGTCAGCGAGGAAGGCATTT...GAAAAGATAGAGTAACTTTCTTGTAACTTTAATCCCATCCCCGTCTGCTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | AGCAAACAAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAATTCACTTTCTCCATCTaGTTCCAGCCCAAGTTTTCT | + |
Preference number: 2 (lower is better) Translates to: SKQRSSNSTPKHLPKSTEFTFSI*FQPKFS Trigger: AGAAAACTTGGGCTGGAATCAGATGGAGAAAGTGAA...TTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTTGTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGAGTACAATTTCAGAGTTaGCACCTCTTCCTTGCGGTG | + |
Preference number: 2 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGVQFQS*HLFLAV Trigger: CACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAC...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121215.2 |
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3UTR-3UTR GCA 90 bp | AGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTGAACACAGTTTAAAATTTCACCTCACTAAATaGGTCATCTGTGTTCTGGCG | + |
Preference number: 2 (lower is better) Translates to: SHRWLSSCSGNDIEHSLKFHLTK*VICVLA Trigger: CGCCAGAACACAGATGACGCATTTAGTGAGGTGAAA...TTTTAAACTGTGTTCAATATCATTTCCGCTGCAACTACTCAGCCACCGATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR CCA 90 bp | CACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTACAGTCATCGGTGGCACCACTACGCCTTTATaGAAACAGGAAAGTACAAAC | + |
Preference number: 2 (lower is better) Translates to: HICLQIIYSSFHITVIGGTTTPL*KQESTN Trigger: GTTTGTACTTTCCTGTTTCCATAAAGGCGTAGTGGT...GCCACCGATGACTGTAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR CAA 90 bp | ACTCACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTaGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTT | + |
Preference number: 2 (lower is better) Translates to: THMVEGFSSLNPNLL*HDIIPLTYHTCNCL Trigger: AAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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3UTR CAA 90 bp | GTAACTCACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTaGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGC | + |
Preference number: 2 (lower is better) Translates to: VTHMVEGFSSLNPNL*LHDIIPLTYHTCNC Trigger: GCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTGAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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3UTR-3UTR TCA 90 bp | CACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTACAGTCATCGGTGGCTTGCATACAATAAGGTaGTACTGTTCAAGATGTCTG | + |
Preference number: 2 (lower is better) Translates to: HICLQIIYSSFHITVIGGLHTIR*YCSRCL Trigger: CAGACATCTTGAACAGTATCACCTTATTGTATGCAA...GCCACCGATGACTGTAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | CACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTGGCAAATGCACAGAGGCTGAATCATCCCTaGAGCCTTTCCTACATTGAC | + |
Preference number: 2 (lower is better) Translates to: HMSYFSIDLQCKELANAQRLNHP*SLSYID Trigger: GTCAATGTAGGAAAGGCTTCAGGGATGATTCAGCCT...CTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR GCA 90 bp | CTTGGTAAAAGAACACACTTCTGTCAGGAGTCTAAAAAGAACTATCAAGTGAAGAAGGATGCACTTTCTTaGCTCTCTGGCTTTCAGAAG | + |
Preference number: 2 (lower is better) Translates to: LGKRTHFCQESKKNYQVKKDALS*LSGFQK Trigger: CTTCTGAAAGCCAGAGAGGCAAGAAAGTGCATCCTT...CTTCACTTGATAGTTCTTTTTAGACTCCTGACAGAAGTGTGTTCTTTTACCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | CTTGGTAAAAGAACACACTTCTGTCAGGAGTCTAAAAAGAACTATCAAGTGAAGCTCAAAACAGGCTTATaGTTCTCTCTTCACAGGAAC | + |
Preference number: 2 (lower is better) Translates to: LGKRTHFCQESKKNYQVKLKTGL*FSLHRN Trigger: GTTCCTGTGAAGAGAGAATCATAAGCCTGTTTTGAG...CTTCACTTGATAGTTCTTTTTAGACTCCTGACAGAAGTGTGTTCTTTTACCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR GCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGACCTCTCCCTCCACAATaGCATAATCTTTATATCCAA | + |
Preference number: 2 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGPLPPQ*HNLYIQ Trigger: TTGGATATAAAGATTATGGCATTGTGGAGGGAGAGG...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR GCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCACTTGGGCTCCAGACATaGTTGATGAGGCTGAAATAT | + |
Preference number: 2 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPLGLQT*LMRLKY Trigger: ATATTTCAGCCTCATCAAGCATGTCTGGAGCCCAAG...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR GCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGACCACCATCTGATACATaGTGTGCAATTATTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGPPSDT*CAIILL Trigger: GAGAAGAATAATTGCACAGCATGTATCAGATGGTGG...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR-3UTR CCA 90 bp | GCAATGAAACCTTTGGATTTTGCTTCAAAGGACCTGAACTCTACACAAACTAGTCAACGCCTAAAGCAATaGATCCTATTTCTTAGAAGC | + |
Preference number: 2 (lower is better) Translates to: AMKPLDFASKDLNSTQTSQRLKQ*ILFLRS Trigger: GCTTCTAAGAAATAGGATCCATTGCTTTAGGCGTTG...ACTAGTTTGTGTAGAGTTCAGGTCCTTTGAAGCAAAATCCAAAGGTTTCATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | AACCAAGCAGACGGGGATGGGATTAAAGTTACAAGAAAGTTACTCTATCTTTTCAAGGGAAGTCACATCTaGAAACAAATCCTTTGTTCA | + |
Preference number: 2 (lower is better) Translates to: NQADGDGIKVTRKLLYLFKGSHI*KQILCS Trigger: TGAACAAAGGATTTGTTTTCAGATGTGACTTCCCTT...GAAAAGATAGAGTAACTTTCTTGTAACTTTAATCCCATCCCCGTCTGCTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR TCA 90 bp | CTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCAAAGGGAAGTCACATCTaGAAACAAATCCTTTGTTCA | + |
Preference number: 2 (lower is better) Translates to: LLLHDIIPLTYHTCNCLSKGSHI*KQILCS Trigger: TGAACAAAGGATTTGTTTTCAGATGTGACTTCCCTT...TGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR-3UTR GCA 90 bp | CTTGGTAAAAGAACACACTTCTGTCAGGAGTCTAAAAAGAACTATCAAGTGAAGTTCCAGAATCTGAAATaGAGTATCAAGAAGCAGGGA | + |
Preference number: 2 (lower is better) Translates to: LGKRTHFCQESKKNYQVKFQNLK*SIKKQG Trigger: TCCCTGCTTCTTGATACTGCATTTCAGATTCTGGAA...CTTCACTTGATAGTTCTTTTTAGACTCCTGACAGAAGTGTGTTCTTTTACCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR GCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATATCACACATGTAATTaGCTTTCATTGGGAAAGGAA | + |
Preference number: 2 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPYHTCN*LSLGKE Trigger: TTCCTTTCCCAATGAAAGGCAATTACATGTGTGATA...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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3UTR GCA 72 bp | TCTTGGGCTCCAGACATGCTTGATGAGGCTGAAATATaGCTCCTTCTTGGCCAACCAAGCAGACGGGGATGG | + |
Preference number: 3 (lower is better) Translates to: SWAPDMLDEAEI*LLLGQPSRRGW Trigger: CCATCCCCGTCTGCTTGGTTGGCCAAGAAGGAGGCATATTTCAGCCTCATCAAGCATGTCTGGAGCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR GCA 72 bp | AGGAACCAAACCCAGGTCCTCTGGAAGAATAACAAGTaGTGTCTACCACTCTCTCTCTATCCCCATCATATG | + |
Preference number: 3 (lower is better) Translates to: RNQTQVLWKNNK*CLPLSLYPHHM Trigger: CATATGATGGGGATAGAGAGAGAGTGGTAGACAGCACTTGTTATTCTTCCAGAGGACCTGGGTTTGGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR-3UTR CAA 90 bp | CACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTACAGTCATCGGTGGCAGTATACACCTGGAGTaGCTTATGGCTTCCTGTAGC | + |
Preference number: 3 (lower is better) Translates to: HICLQIIYSSFHITVIGGSIHLE*LMASCS Trigger: GCTACAGGAAGCCATAAGCAACTCCAGGTGTATACT...GCCACCGATGACTGTAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR TCA 72 bp | TTGCGGTGCTTCCCTCAGGTTTCTTGTTCCAGAATCTaGAATGCAGTATCAAGAAGCAGGGACACTACTAAC | + |
Preference number: 3 (lower is better) Translates to: LRCFPQVSCSRI*NAVSRSRDTTN Trigger: GTTAGTAGTGTCCCTGCTTCTTGATACTGCATTTCAGATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR TCA 72 bp | ATTCCAAAAGAAATGATTCTAGGCTTCGGGACGCTCTaGTTCCAGAGAAGCATCTGTCAGTATACACCTGGA | + |
Preference number: 3 (lower is better) Translates to: IPKEMILGFGTL*FQRSICQYTPG Trigger: TCCAGGTGTATACTGACAGATGCTTCTCTGGAATCAGAGCGTCCCGAAGCCTAGAATCATTTCTTTTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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3UTR TCA 72 bp | CAAGGGGAAACAGTTCACCCTCACACAAATCCCATGTaGACTTACTACAATTTCAGAGTTGACACCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: QGETVHPHTNPM*TYYNFRVDTSS Trigger: GGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTCACATGGGATTTGTGTGAGGGTGAACTGTTTCCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR TCA 72 bp | TCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTaGTACATGCTGTGCAATTATTCTTCTCCCCTGCTG | + |
Preference number: 3 (lower is better) Translates to: SALLFSQASTTI*YMLCNYSSPLL Trigger: CAGCAGGGGAGAAGAATAATTGCACAGCATGTATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
3UTR GCA 72 bp | GAACTTACTACAATTTCAGAGTTGACACCTCTTCCTTaGGGTGCTTCCCTCAGGTTTCTTGTTCCAGAATCT | + |
Preference number: 3 (lower is better) Translates to: ELTTISELTPLP*GASLRFLVPES Trigger: AGATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR CCA 72 bp | TCCAGTTTCACCTCACTAAATGCGTCATCTGTGTTCTaGCGGGACCATAAAACAGAAGTGCATTCAAACAGA | + |
Preference number: 3 (lower is better) Translates to: SSFTSLNASSVF*RDHKTEVHSNR Trigger: TCTGTTTGAATGCACTTCTGTTTTATGGTCCCGCCAGAACACAGATGACGCATTTAGTGAGGTGAAACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR TCA 72 bp | TTATTTCAGTGTATGCGCTACGTGTTTGGTATAGGCTaGATCATCCCTGAAGCCTTTCCTACATTGACTACC | + |
Preference number: 3 (lower is better) Translates to: LFQCMRYVFGIG*IIPEAFPTLTT Trigger: GGTAGTCAATGTAGGAAAGGCTTCAGGGATGATTCAGCCTATACCAAACACGTAGCGCATACACTGAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
3UTR TCA 72 bp | TGCAATGAAGCCATTTCTTTAACTGTGTGTGACTCATaGAGACGTTCCATCTCTGACTTGTTCCTCCCTGTA | + |
Preference number: 3 (lower is better) Translates to: CNEAISLTVCDS*RRSISDLFLPV Trigger: TACAGGGAGGAACAAGTCAGAGATGGAACGTCTTCATGAGTCACACACAGTTAAAGAAATGGCTTCATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR GCA 72 bp | CCCCATCATATGATAACCATCTTGCTGTCAAGGGCATaGATACAGAAGACTGAGATGTCTAACTTCCTTATG | + |
Preference number: 3 (lower is better) Translates to: PHHMITILLSRA*IQKTEMSNFLM Trigger: CATAAGGAAGTTAGACATCTCAGTCTTCTGTATGCATGCCCTTGACAGCAAGATGGTTATCATATGATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR-3UTR CAA 90 bp | CACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTTGCATGACATCCTGAAAACAAATCCTTaGTTCACTCAAGGACAGCAT | + |
Preference number: 3 (lower is better) Translates to: HMVEGFSSLNPNLLLHDILKTNP*FTQGQH Trigger: ATGCTGTCCTTGAGTGAACAAAGGATTTGTTTTCAG...GATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
3UTR TCA 72 bp | ACCACTACGCCTTTATGGAAACAGGAAAGTACAAACTaGCAAAAGTGTCACTCCCAAATAACACTTCCAAGC | + |
Preference number: 3 (lower is better) Translates to: TTTPLWKQESTN*QKCHSQITLPS Trigger: GCTTGGAAGTGTTATTTGGGAGTGACACTTTTGTCAGTTTGTACTTTCCTGTTTCCATAAAGGCGTAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR GCA 72 bp | CTCCTTCCACATTACAGTCATCGGTGGCTGAGTAGTTaGAGCGGAAATGATATTGAACACAGTTTAAAATAC | + |
Preference number: 3 (lower is better) Translates to: LLPHYSHRWLSS*SGNDIEHSLKY Trigger: GTATTTTAAACTGTGTTCAATATCATTTCCGCTGCAACTACTCAGCCACCGATGACTGTAATGTGGAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
||
3UTR TCA 72 bp | CTATTTAAGGGCTGTGTGATTACAGGATACTTGTCCTaGTATTCCATTATACTCTTCTGTCTGTTCCCCAGT | + |
Preference number: 3 (lower is better) Translates to: LFKGCVITGYLS*YSIILFCLFPS Trigger: ACTGGGGAACAGACAGAAGAGTATAATGGAATATCAGGACAAGTATCCTGTAATCACACAGCCCTTAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR TCA 72 bp | CTACTCAACAGTCTTAATCATCTCAAAACAGGCTTATaGTTCTCTCTTCACAGGAACCAAAAGGTAGAAGAC | + |
Preference number: 3 (lower is better) Translates to: LLNSLNHLKTGL*FSLHRNQKVED Trigger: GTCTTCTACCTTTTGGTTCCTGTGAAGAGAGAATCATAAGCCTGTTTTGAGATGATTAAGACTGTTGAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR GCA 72 bp | TCAAGAAGCAGGGACACTACTAACACTAATGGTACATaGATGTTTTACTTGAGAATAACAGACACCAAAGTG | + |
Preference number: 3 (lower is better) Translates to: SRSRDTTNTNGT*MFYLRITDTKV Trigger: CACTTTGGTGTCTGTTATTCTCAAGTAAAACATGCATGTACCATTAGTGTTAGTAGTGTCCCTGCTTCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
3UTR GCA 72 bp | CATGACATCATACCCCTTACATATCACACATGTAATTaGCTTTCATTGGGAAAGGAAATGAATGATCAAGCT | + |
Preference number: 3 (lower is better) Translates to: HDIIPLTYHTCN*LSLGKEMNDQA Trigger: AGCTTGATCATTCATTTCCTTTCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR CCA 72 bp | CTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATTaGCACATGAGTTTGTATGTTTTTAGGACAGCACTA | + |
Preference number: 3 (lower is better) Translates to: LLSIYPRVLKIY*HMSLYVFRTAL Trigger: TAGTGCTGTCCTAAAAACATACAAACTCATGTGCCAATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
||
3UTR-3UTR CAA 90 bp | CAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATAATGAACTGAAAACAAATCCTTaGTTCACTCAAGGACAGCAT | + |
Preference number: 3 (lower is better) Translates to: QRAFLWIMKNFLTTTHNELKTNP*FTQGQH Trigger: ATGCTGTCCTTGAGTGAACAAAGGATTTGTTTTCAG...TTCATTATGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | GCCTTCCTCGCTGACGGTGCTTTATTTCAGTGTATGCGCTACGTGTTTGGTATAAATATTTTCCCACAGTaGGGACACTGGCTGGGACCC | + |
Preference number: 4 (lower is better) Translates to: AFLADGALFQCMRYVFGINIFPQ*GHWLGP Trigger: GGGTCCCAGCCAGTGTCCTCACTGTGGGAAAATATT...TATACCAAACACGTAGCGCATACACTGAAATAAAGCACCGTCAGCGAGGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR CCA 90 bp | GCCTTCCTCGCTGACGGTGCTTTATTTCAGTGTATGCGCTACGTGTTTGGTATAAGTGAGGACACTGGCTaGGACCCTCTCTGTTATGAA | + |
Preference number: 4 (lower is better) Translates to: AFLADGALFQCMRYVFGISEDTG*DPLCYE Trigger: TTCATAACAGAGAGGGTCCCAGCCAGTGTCCTCACT...TATACCAAACACGTAGCGCATACACTGAAATAAAGCACCGTCAGCGAGGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATAATGCTGAGTGAGGTATaGGCCATCTCGGAAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: PIPFLSFTFLSGINHHLIMLSEV*AISESL Trigger: AAGGCTTTCCGAGATGGCTCATACCTCACTCAGCAT...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATAAGATGCACAGTAAGGTaGGAAATGTCAGTGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: PIPFLSFTFLSGINHHLIRCTVR*EMSVKG Trigger: GCCCTTCACTGACATTTCTCACCTTACTGTGCATCT...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | CACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTTGCATGACATCATGCTGAGTGAGGTATaGGCCATCTCGGAAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: HMVEGFSSLNPNLLLHDIMLSEV*AISESL Trigger: AAGGCTTTCCGAGATGGCTCATACCTCACTCAGCAT...GATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATAATTCTTCTCCCCTGCTaGACTGCAAACACCTTGTTC | + |
Preference number: 4 (lower is better) Translates to: PIPFLSFTFLSGINHHLIILLPC*TANTLF Trigger: GAACAAGGTGTTTGCAGTTCAGCAGGGGAGAAGAAT...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR CCA 90 bp | GCCTTCCTCGCTGACGGTGCTTTATTTCAGTGTATGCGCTACGTGTTTGGTATATTCTTACAAGTTGAGTaGCTTCCATGGAAGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: AFLADGALFQCMRYVFGIFLQVE*LPWKVG Trigger: CCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAA...TATACCAAACACGTAGCGCATACACTGAAATAAAGCACCGTCAGCGAGGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
3UTR CAA 72 bp | ACTGCACGTACTCCATACAGTTGTACAATTTCAGAGTaGACACCTCTTCCTTGCGGTGCTTCCCTCAGGTTT | + |
Preference number: 4 (lower is better) Translates to: TARTPYSCTISE*TPLPCGASLRF Trigger: AAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTACAACTGTATGGAGTACGTGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | TTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTCGTGCTGACCCATCACTaGAAGCTTTCCCACACTTAC | + |
Preference number: 4 (lower is better) Translates to: FPVNGFTLAQSFVLHTCLVLTHH*KLSHTY Trigger: GTAAGTGTGGGAAAGCTTTCAGTGATGGGTCAGCAC...GAGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR CAA 72 bp | GATTCCAGAGAAGCATCTGTCAGTATACACCTGGAGTaGCTTATGGCTTCCTGTAGCCATGATCTAGCCTTT | + |
Preference number: 4 (lower is better) Translates to: DSREASVSIHLE*LMASCSHDLAF Trigger: AAAGGCTAGATCATGGCTACAGGAAGCCATAAGCAACTCCAGGTGTATACTGACAGATGCTTCTCTGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | GCCTTCCTCGCTGACGGTGCTTTATTTCAGTGTATGCGCTACGTGTTTGGTATAGATATGCACTCTCAATaGAAGTTTTCCCACACTCTT | + |
Preference number: 4 (lower is better) Translates to: AFLADGALFQCMRYVFGIDMHSQ*KFSHTL Trigger: AAGAGTGTGGGAAAACTTTCATTGAGAGTGCATATC...TATACCAAACACGTAGCGCATACACTGAAATAAAGCACCGTCAGCGAGGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR GCA 90 bp | CACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTACAGTCATCGGTGGCGCAAACACCTTGTTCTaGCTTCTGCTACAGTACCAA | + |
Preference number: 4 (lower is better) Translates to: HICLQIIYSSFHITVIGGANTLF*LLLQYQ Trigger: TTGGTACTGTAGCAGAAGGCAGAACAAGGTGTTTGC...GCCACCGATGACTGTAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR CCA 90 bp | CACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTTGCATGACATCAATTATCACCTAAAATaGGGAAGCAGGGAGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: HMVEGFSSLNPNLLLHDINYHLK*GSREPL Trigger: GAGAGGCTCCCTGCTTCCCCATTTTAGGTGATAATT...GATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR CAA 72 bp | ACACAAATCCCATGTGAACTTACTACAATTTCAGAGTaGACACCTCTTCCTTGCGGTGCTTCCCTCAGGTTT | + |
Preference number: 4 (lower is better) Translates to: TQIPCELTTISE*TPLPCGASLRF Trigger: AAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAGTAAGTTCACATGGGATTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | TGGACACATCCACACACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTAAGATGCACAGTAAGGTaGGAAATGTCAGTGAAGGGC | + |
Preference number: 4 (lower is better) Translates to: WTHPHTFAYKSSIAPSTLRCTVR*EMSVKG Trigger: GCCCTTCACTGACATTTCTCACCTTACTGTGCATCT...TAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTGTGTGGATGTGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | AAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATAATATTTTCCCACAGTaGGGACACTGGCTGGGACCC | + |
Preference number: 4 (lower is better) Translates to: KDPAIPLLSIYPRVLKIYNIFPQ*GHWLGP Trigger: GGGTCCCAGCCAGTGTCCTCACTGTGGGAAAATATT...ATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | AAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATGTGCTGACCCATCACTaGAAGCTTTCCCACACTTAC | + |
Preference number: 4 (lower is better) Translates to: KDPAIPLLSIYPRVLKIYVLTHH*KLSHTY Trigger: GTAAGTGTGGGAAAGCTTTCAGTGATGGGTCAGCAC...ATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
||
CDS-3UTR TCA 90 bp | CTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCAGTACAATTTCAGAGTTaGCACCTCTTCCTTGCGGTG | + |
Preference number: 4 (lower is better) Translates to: LLLHDIIPLTYHTCNCLSVQFQS*HLFLAV Trigger: CACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTAC...TGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR CCA 90 bp | TTTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTAATTATCACCTAAAATaGGGAAGCAGGGAGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: FSCKWVYPCTKLCSPYLSNYHLK*GSREPL Trigger: GAGAGGCTCCCTGCTTCCCCATTTTAGGTGATAATT...AGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR CAA 72 bp | GTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTaGCATGACATCATACCCCTTACATATCACACATGT | + |
Preference number: 4 (lower is better) Translates to: VEGFSSLNPNLL*HDIIPLTYHTC Trigger: ACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
3UTR CAA 72 bp | ATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTaGTTGCATGACATCATACCCCTTACATATCACACA | + |
Preference number: 4 (lower is better) Translates to: MVEGFSSLNPNL*LHDIIPLTYHT Trigger: TGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | CTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATGGTTTCTTACAAGTTaGGTGGCTTCCATGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: LLLHDIIPLTYHTCNCLSWFLTS*VASMEG Trigger: ACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCA...TGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
CDS-3UTR GCA 90 bp | CACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTTGCATGACATCACAATTTGCTTCCTGTaGCTCTGTTTTCTCATCAAT | + |
Preference number: 4 (lower is better) Translates to: HMVEGFSSLNPNLLLHDITICFL*LCFLIN Trigger: ATTGATGAGAAAACAGAGGCACAGGAAGCAAATTGT...GATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
CDS-3UTR GCA 90 bp | CAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATAATGAATTGACACCTCTTCCTTaGGGTGCTTCCCTCAGGTTT | + |
Preference number: 4 (lower is better) Translates to: QRAFLWIMKNFLTTTHNELTPLP*GASLRF Trigger: AAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAA...TTCATTATGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR GCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATCTCCCCTGCTGAACTaGAAACACCTTGTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPSPLLN*KHLVLP Trigger: AGGCAGAACAAGGTGTTTGCAGTTCAGCAGGGGAGA...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR CCA 90 bp | CTAACCTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTCCCCCAAATTAACATaGCCACAATTTGCTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: LTSCCMTSYPLHITHVIASPKLT*PQFASC Trigger: ACAGGAAGCAAATTGTGGCCATGTTAATTTGGGGGA...GGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
CDS-3UTR CCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGATTCTTACAAGTTGAGTaGCTTCCATGGAAGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGFLQVE*LPWKVG Trigger: CCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAA...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
||
CDS-3UTR CCA 90 bp | AGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTGAACACAGTTTAAAACTTCAGACACTGGTATaGAGTCTCCTTAGTGTGAAT | + |
Preference number: 4 (lower is better) Translates to: SHRWLSSCSGNDIEHSLKLQTLV*SLLSVN Trigger: ATTCACACTAAGGAGACTCCATACCAGTGTCTGAAG...TTTTAAACTGTGTTCAATATCATTTCCGCTGCAACTACTCAGCCACCGATGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR CCA 90 bp | CACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTGGCAAATGCACAGAGTGAGGACACTGGCTaGGACCCTCTCTGTTATGAA | + |
Preference number: 4 (lower is better) Translates to: HMSYFSIDLQCKELANAQSEDTG*DPLCYE Trigger: TTCATAACAGAGAGGGTCCCAGCCAGTGTCCTCACT...CTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
||
CDS-3UTR TCA 90 bp | TTTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTGGGATGAATTTCTGTTaGACGTTTTTCCGCAATCTA | + |
Preference number: 4 (lower is better) Translates to: FSCKWVYPCTKLCSPYLSGMNFC*TFFRNL Trigger: TAGATTGCGGAAAAACGTTCAACAGAAATTCATCCC...AGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
||
CDS-3UTR TCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCAGTTCCAGAATCTGTGTaGATCCTCTGGTGTTGTGTC | + |
Preference number: 4 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPVPESV*ILWCCV Trigger: GACACAACACCAGAGGATTCACACAGATTCTGGAAC...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
||
CDS-3UTR GCA 90 bp | CACATGGTGGAAGGTTTCTCATCCCTAAATCCTAACCTCTTGTTGCATGACATCTCAATTAAAGGAGATTaGCTCAAATTTCTTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: HMVEGFSSLNPNLLLHDISIKGD*LKFLSW Trigger: CCAGGAAAGAAATTTGAGGCAATCTCCTTTAATTGA...GATGTCATGCAACAAGAGGTTAGGATTTAGGGATGAGAAACCTTCCACCATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CCA 90 bp | GCAATGAAACCTTTGGATTTTGCTTCAAAGGACCTGAACTCTACACAAACTAGTTCCCCCAAATTAACATaGCCACAATTTGCTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: AMKPLDFASKDLNSTQTSSPKLT*PQFASC Trigger: ACAGGAAGCAAATTGTGGCCATGTTAATTTGGGGGA...ACTAGTTTGTGTAGAGTTCAGGTCCTTTGAAGCAAAATCCAAAGGTTTCATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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CDS-3UTR CCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGACTTCAGACACTGGTATaGAGTCTCCTTAGTGTGAAT | + |
Preference number: 4 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGLQTLV*SLLSVN Trigger: ATTCACACTAAGGAGACTCCATACCAGTGTCTGAAG...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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3UTR CAA 72 bp | GCTATGGAGTGGAAAGGGTTGGTTTACTTAACTTGCTaGGTAAAAGAACACACTTCTGTCAGGAGTCTAAAA | + |
Preference number: 4 (lower is better) Translates to: AMEWKGLVYLTC*VKEHTSVRSLK Trigger: TTTTAGACTCCTGACAGAAGTGTGTTCTTTTACCAAGCAAGTTAAGTAAACCAACCCTTTCCACTCCATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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CDS-3UTR TCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATGGTTTCTTACAAGTTaGGTGGCTTCCATGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPWFLTS*VASMEG Trigger: ACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCA...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR TCA 90 bp | CACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTGGCAAATGCACAGTGGTTTCTTACAAGTTaGGTGGCTTCCATGGAAGGT | + |
Preference number: 4 (lower is better) Translates to: HMSYFSIDLQCKELANAQWFLTS*VASMEG Trigger: ACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCA...CTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR TCA 90 bp | CTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCAGGGATGAATTTCTGTTaGACGTTTTTCCGCAATCTA | + |
Preference number: 4 (lower is better) Translates to: LLLHDIIPLTYHTCNCLSGMNFC*TFFRNL Trigger: TAGATTGCGGAAAAACGTTCAACAGAAATTCATCCC...TGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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CDS-3UTR CCA 90 bp | ATATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCAAATTATCACCTAAAATaGGGAAGCAGGGAGCCTCTC | + |
Preference number: 4 (lower is better) Translates to: ICTKGFSMDNEKFPHNHPNYHLK*GSREPL Trigger: GAGAGGCTCCCTGCTTCCCCATTTTAGGTGATAATT...TGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CCA 90 bp | AAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATTCCCCCAAATTAACATaGCCACAATTTGCTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: KDPAIPLLSIYPRVLKIYSPKLT*PQFASC Trigger: ACAGGAAGCAAATTGTGGCCATGTTAATTTGGGGGA...ATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CCA 90 bp | CAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATAATGAATTCTTACAAGTTGAGTaGCTTCCATGGAAGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: QRAFLWIMKNFLTTTHNEFLQVE*LPWKVG Trigger: CCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAA...TTCATTATGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR GCA 90 bp | TTTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTTCAATTAAAGGAGATTaGCTCAAATTTCTTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: FSCKWVYPCTKLCSPYLSSIKGD*LKFLSW Trigger: CCAGGAAAGAAATTTGAGGCAATCTCCTTTAATTGA...AGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR GCA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGAACAATTTGCTTCCTGTaGCTCTGTTTTCTCATCAAT | + |
Preference number: 4 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGTICFL*LCFLIN Trigger: ATTGATGAGAAAACAGAGGCACAGGAAGCAAATTGT...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CCA 90 bp | GCAATGAAACCTTTGGATTTTGCTTCAAAGGACCTGAACTCTACACAAACTAGTCTCAAATTTCTTTCCTaGTTCTCACAGTCCCAATTA | + |
Preference number: 4 (lower is better) Translates to: AMKPLDFASKDLNSTQTSLKFLS*FSQSQL Trigger: TAATTGGGACTGTGAGAACCAGGAAAGAAATTTGAG...ACTAGTTTGTGTAGAGTTCAGGTCCTTTGAAGCAAAATCCAAAGGTTTCATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072222.8 |
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CDS-3UTR CCA 90 bp | TTTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTTCAAGTTGTAGTTCTTaGAGAATGATTTTCCGCAAT | + |
Preference number: 4 (lower is better) Translates to: FSCKWVYPCTKLCSPYLSSSCSS*RMIFRN Trigger: ATTGCGGAAAATCATTCTCCAAGAACTACAACTTGA...AGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CCA 90 bp | AGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTGAACACAGTTTAAAATCAAGTTGTAGTTCTTaGAGAATGATTTTCCGCAAT | + |
Preference number: 4 (lower is better) Translates to: SHRWLSSCSGNDIEHSLKSSCSS*RMIFRN Trigger: ATTGCGGAAAATCATTCTCCAAGAACTACAACTTGA...TTTTAAACTGTGTTCAATATCATTTCCGCTGCAACTACTCAGCCACCGATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CCA 90 bp | CTAACCTCTTGTTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTCAAGTTGTAGTTCTTaGAGAATGATTTTCCGCAAT | + |
Preference number: 4 (lower is better) Translates to: LTSCCMTSYPLHITHVIASSCSS*RMIFRN Trigger: ATTGCGGAAAATCATTCTCCAAGAACTACAACTTGA...GGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGGTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR TCA 90 bp | TATATAAAGAATTCTTTTCTGCGAGCAAGGGAAGTCACATCTGAAAACAAATCCGATATGCACTCTCAATaGAAGTTTTCCCACACTCTT | + |
Preference number: 4 (lower is better) Translates to: YIKNSFLRAREVTSENKSDMHSQ*KFSHTL Trigger: AAGAGTGTGGGAAAACTTTCATTGAGAGTGCATATC...GGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAGAAAAGAATTCTTTATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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CDS-3UTR CCA 90 bp | TATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATCTCAAATTTCTTTCCTaGTTCTCACAGTCCCAATTA | + |
Preference number: 4 (lower is better) Translates to: YVQRAFLWIMKNFLTTTHLKFLS*FSQSQL Trigger: TAATTGGGACTGTGAGAACCAGGAAAGAAATTTGAG...ATGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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3UTR CAA 72 bp | ATGAAGTTACAAAGGGCCACATGTCTTATTTTTCCATaGATCTGCAATGTAAAGAATTGGCAAATGCACAGT | + |
Preference number: 4 (lower is better) Translates to: MKLQRATCLIFP*ICNVKNWQMHS Trigger: ACTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTGGCCCTTTGTAACTTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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3UTR CAA 72 bp | TACCCAAGAGTACTGAAAATTTATTGGCACATGAGTTaGTATGTTTTTAGGACAGCACTATTCTTAGTAGCC | + |
Preference number: 4 (lower is better) Translates to: YPRVLKIYWHMS*YVFRTALFLVA Trigger: GGCTACTAAGAATAGTGCTGTCCTAAAAACATACAAACTCATGTGCCAATAAATTTTCAGTACTCTTGGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR GCA 90 bp | TATGTACAAAGGGCTTTTCTATGGATAATGAAAAATTTCCTCACAACCACCCATTCAATTAAAGGAGATTaGCTCAAATTTCTTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: YVQRAFLWIMKNFLTTTHSIKGD*LKFLSW Trigger: CCAGGAAAGAAATTTGAGGCAATCTCCTTTAATTGA...ATGGGTGGTTGTGAGGAAATTTTTCATTATCCATAGAAAAGCCCTTTGTACATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS TCA 90 bp | CTTCCTTGCGGTGCTTCCCTCAGGTTTCTTGTTCCAGAATCTGTGTaGATCCTCTGGTGTTGTGTCAGTGCTGACCCATCACTGAAAGCT | + |
Preference number: 5 (lower is better) Translates to: LPCGASLRFLVPESV*ILWCCVSADPSLKA Trigger: AGCTTTCAGTGATGGGTCAGCACTGACACAACACCAGAGGATTCACACAGATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
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CDS CCA 90 bp | AGGATTTCTCTCTCATTTGGTTTCTTACAAGTTGAGTGGCTTCCATaGAAGGTTGGGTGGCTTTCTCACAAGCATCGCCGTCAGCAGTTC | + |
Preference number: 5 (lower is better) Translates to: RISLSFGFLQVEWLP*KVGWLSHKHRRQQF Trigger: GAACTGCTGACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCAAATGAGAGAGAAATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | CTCCTTCCACATTACAGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTAGAGAGGAGTTCCGTTaGAAGCACTTGCCACATTCG | + |
Preference number: 5 (lower is better) Translates to: LLPHYSHRWLSSCSGNDIREEFR*KHLPHS Trigger: CGAATGTGGCAAGTGCTTCAAACGGAACTCCTCTCT...AATATCATTTCCGCTGCAACTACTCAGCCACCGATGACTGTAATGTGGAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | TTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTCGTTGACACCTCTTCCTaGCGGTGCTTCCCTCAGGTT | + |
Preference number: 5 (lower is better) Translates to: FPVNGFTLAQSFVLHTCLVDTSS*RCFPQV Trigger: AACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAAC...GAGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | CACATTTGCCTACAAATCATCTATAGCTCCTTCCACATTACAGTCATCGGTGGCAAACATGGAAGCCGTTaGTCCCAGGAACTCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: HICLQIIYSSFHITVIGGKHGSR*SQELSE Trigger: CTCAGAGAGTTCCTGGGACAAACGGCTTCCATGTTT...GCCACCGATGACTGTAATGTGGAAGGAGCTATAGATGATTTGTAGGCAAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS TCA 90 bp | ATATCTGAGTTAAAAACATGGAAGCCGTTTGTCCCAGGAACTCTCTaGGAGGGTAGAAGGGCTGGATTTGTACTCAAATGCTCCCCCAAA | + |
Preference number: 5 (lower is better) Translates to: ISELKTWKPFVPGTL*EGRRAGFVLKCSPK Trigger: TTTGGGGGAGCATTTGAGTACAAATCCAGCCCTTCTACCCTCTCAGAGAGTTCCTGGGACAAACGGCTTCCATGTTTTTAACTCAGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS GCA 90 bp | TCCATACAGTTGTACAATTTCAGAGTTGACACCTCTTCCTTGCGGTaGTTCCCTCAGGTTTCTTGTTCCAGAATCTGTGTGAATCCTCTG | + |
Preference number: 5 (lower is better) Translates to: SIQLYNFRVDTSSLR*FPQVSCSRICVNPL Trigger: CAGAGGATTCACACAGATTCTGGAACAAGAAACCTGAGGGAAGCACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTACAACTGTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | CTCCTTCCACATTACAGTCATCGGTGGCTGAGTAGTTGCAGCGGAAATGATATTTGTACAATTTCAGAGTaGACACCTCTTCCTTGCGGT | + |
Preference number: 5 (lower is better) Translates to: LLPHYSHRWLSSCSGNDICTISE*TPLPCG Trigger: ACCGCAAGGAAGAGGTGTCAACTCTGAAATTGTACA...AATATCATTTCCGCTGCAACTACTCAGCCACCGATGACTGTAATGTGGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | AAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAAAATTTATGGCTTCCATGGAAGGTaGGGTGGCTTTCTCACAAGC | + |
Preference number: 5 (lower is better) Translates to: KDPAIPLLSIYPRVLKIYGFHGR*GGFLTS Trigger: GCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCC...ATAAATTTTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | TTTTCCTGTAAATGGGTTTACCCTTGCACAAAGCTTTGTTCTCCATACCTGTCTAGAGAGGAGTTCCGTTaGAAGCACTTGCCACATTCG | + |
Preference number: 5 (lower is better) Translates to: FSCKWVYPCTKLCSPYLSREEFR*KHLPHS Trigger: CGAATGTGGCAAGTGCTTCAAACGGAACTCCTCTCT...AGACAGGTATGGAGAACAAAGCTTTGTGCAAGGGTAAACCCATTTACAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | TTGCATGACATCATACCCCTTACATATCACACATGTAATTGCCTTTCATTGGGAAAACATGGAAGCCGTTaGTCCCAGGAACTCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: LHDIIPLTYHTCNCLSLGKHGSR*SQELSE Trigger: CTCAGAGAGTTCCTGGGACAAACGGCTTCCATGTTT...TCCCAATGAAAGGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | CACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTGGCAAATGCACAGGGCTTCCATGGAAGGTaGGGTGGCTTTCTCACAAGC | + |
Preference number: 5 (lower is better) Translates to: HMSYFSIDLQCKELANAQGFHGR*GGFLTS Trigger: GCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCC...CTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | AGCAAACAAAGATCCAGCAATTCCACTCCTAAGCATCTACCCAAGAGTACTGAACTTCCCTCAGGTTTCTaGTTCCAGAATCTGTGTGAA | + |
Preference number: 5 (lower is better) Translates to: SKQRSSNSTPKHLPKSTELPSGF*FQNLCE Trigger: TTCACACAGATTCTGGAACAAGAAACCTGAGGGAAG...TTCAGTACTCTTGGGTAGATGCTTAGGAGTGGAATTGCTGGATCTTTGTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108546.2 |
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CDS-3UTR CAA 90 bp | CCCATCCCCTTTCTCAGCTTTACTTTTCTCTCAGGCATCAACCACCATCTGATAGGATTTCTCTCTCATTaGGTTTCTTACAAGTTGAGT | + |
Preference number: 5 (lower is better) Translates to: PIPFLSFTFLSGINHHLIGFLSH*VSYKLS Trigger: ACTCAACTTGTAAGAAACCAAATGAGAGAGAAATCC...TATCAGATGGTGGTTGATGCCTGAGAGAAAAGTAAAGCTGAGAAAGGGGATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | TATATAAAGAATTCTTTTCTGCGAGCAAGGGAAGTCACATCTGAAAACAAATCCAAACATGGAAGCCGTTaGTCCCAGGAACTCTCTGAG | + |
Preference number: 5 (lower is better) Translates to: YIKNSFLRAREVTSENKSKHGSR*SQELSE Trigger: CTCAGAGAGTTCCTGGGACAAACGGCTTCCATGTTT...GGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAGAAAAGAATTCTTTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | TATATAAAGAATTCTTTTCTGCGAGCAAGGGAAGTCACATCTGAAAACAAATCCAGAGAGGAGTTCCGTTaGAAGCACTTGCCACATTCG | + |
Preference number: 5 (lower is better) Translates to: YIKNSFLRAREVTSENKSREEFR*KHLPHS Trigger: CGAATGTGGCAAGTGCTTCAAACGGAACTCCTCTCT...GGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAGAAAAGAATTCTTTATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | CTTTTCTGCGAGCAAGGGAAGTCACATCTGAAAACAAATCCTTTGTTCACTCAAGGATTTCTCTCTCATTaGGTTTCTTACAAGTTGAGT | + |
Preference number: 5 (lower is better) Translates to: LFCEQGKSHLKTNPLFTQGFLSH*VSYKLS Trigger: ACTCAACTTGTAAGAAACCAAATGAGAGAGAAATCC...TTGAGTGAACAAAGGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000121215.2 |
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CDS-3UTR CAA 90 bp | CACATGTCTTATTTTTCCATTGATCTGCAATGTAAAGAATTGGCAAATGCACAGGGATTTCTCTCTCATTaGGTTTCTTACAAGTTGAGT | + |
Preference number: 5 (lower is better) Translates to: HMSYFSIDLQCKELANAQGFLSH*VSYKLS Trigger: ACTCAACTTGTAAGAAACCAAATGAGAGAGAAATCC...CTGTGCATTTGCCAATTCTTTACATTGCAGATCAATGGAAAAATAAGACATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 |
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CDS CCA 72 bp | TTCTTACAAGTTGAGTGGCTTCCATGGAAGGTTGGGTaGCTTTCTCACAAGCATCGCCGTCAGCAGTTCCCT | + |
Preference number: 6 (lower is better) Translates to: FLQVEWLPWKVG*LSHKHRRQQFP Trigger: AGGGAACTGCTGACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS CAA 72 bp | TTGGTTTCTTACAAGTTGAGTGGCTTCCATGGAAGGTaGGGTGGCTTTCTCACAAGCATCGCCGTCAGCAGT | + |
Preference number: 6 (lower is better) Translates to: LVSYKLSGFHGR*GGFLTSIAVSS Trigger: ACTGCTGACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS CAA 90 bp | CTCTCTCATTTGGTTTCTTACAAGTTGAGTGGCTTCCATGGAAGGTaGGGTGGCTTTCTCACAAGCATCGCCGTCAGCAGTTCCCTTAAC | + |
Preference number: 6 (lower is better) Translates to: LSHLVSYKLSGFHGR*GGFLTSIAVSSSLN Trigger: GTTAAGGGAACTGCTGACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCAAATGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS CCA 72 bp | CTCTCATTTGGTTTCTTACAAGTTGAGTGGCTTCCATaGAAGGTTGGGTGGCTTTCTCACAAGCATCGCCGT | + |
Preference number: 6 (lower is better) Translates to: LSFGFLQVEWLP*KVGWLSHKHRR Trigger: ACGGCGATGCTTGTGAGAAAGCCACCCAACCTTCCATGGAAGCCACTCAACTTGTAAGAAACCAAATGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |
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CDS TCA 72 bp | TTAAAAACATGGAAGCCGTTTGTCCCAGGAACTCTCTaGGAGGGTAGAAGGGCTGGATTTGTACTCAAATGC | + |
Preference number: 6 (lower is better) Translates to: LKTWKPFVPGTL*EGRRAGFVLKC Trigger: GCATTTGAGTACAAATCCAGCCCTTCTACCCTCTCAGAGAGTTCCTGGGACAAACGGCTTCCATGTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072222.8 ENSMUST00000108546.2 ENSMUST00000121215.2 |