Pregenerated sensors for ZFP326 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029290Ensembl transcript IDs: ENSMUST00000031227.11, ENSMUST00000138615.8, ENSMUST00000150440.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTCCGCCTCCTCTGCCTCCCCTGCTCCCTCTGCCTCTCCCACTaGGTCAGCTTCCCCTGCTGCTGCGGCTTCTGCTGTGCCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LLRLLCLPCSLCLSH*VSFPCCCGFCCALL Trigger: GAGGAGGGCACAGCAGAAGCCGCAGCAGCAGGGGAAGCTGACGCAGTGGGAGAGGCAGAGGGAGCAGGGGAGGCAGAGGAGGCGGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CCA 90 bp | CTGTGCTCGCACTGCTCAGTAGCACAGGCCTGGGCAGCAAACTCCTaGGTTCCCTCCTCTTCCTCCTCCTCCTCCGCCTCCTCTGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LCSHCSVAQAWAANS*VPSSSSSSSASSAS Trigger: GGAGGCAGAGGAGGCGGAGGAGGAGGAGGAAGAGGAGGGAACCCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CCA 90 bp | GGCGCCTACATCTGCCTGTGCTCGCACTGCTCAGTAGCACAGGCCTaGGCAGCAAACTCCTGGGTTCCCTCCTCTTCCTCCTCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: GAYICLCSHCSVAQA*AANSWVPSSSSSSS Trigger: GGAGGAGGAGGAGGAAGAGGAGGGAACCCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 90 bp | AAGGCCCCTGTGAAGTGTGGCGCCTACATCTGCCTGTGCTCGCACTaGTCAGTAGCACAGGCCTGGGCAGCAAACTCCTGGGTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: KAPVKCGAYICLCSH*SVAQAWAANSWVPS Trigger: GGAGGGAACCCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 90 bp | GCAGCCAGTAAGGCCCCTGTGAAGTGTGGCGCCTACATCTGCCTGTaGTCGCACTGCTCAGTAGCACAGGCCTGGGCAGCAAACTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AASKAPVKCGAYICL*SHCSVAQAWAANSW Trigger: CCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTTACTGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 90 bp | ACGGTAGCAGCCAGTAAGGCCCCTGTGAAGTGTGGCGCCTACATCTaGCTGTGCTCGCACTGCTCAGTAGCACAGGCCTGGGCAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: TVAASKAPVKCGAYI*LCSHCSVAQAWAAN Trigger: GTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTTACTGGCTGCTACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CCA 90 bp | AGCGCTCATACCGTGCCTTCACGATCGGATTGTTTAAGATGCTTGTaGCAGTCAGCACACTTTCCCTCTTTATCTGTTCCTTATAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SAHTVPSRSDCLRCL*QSAHFPSLSVPYKP Trigger: AGGCTTATAAGGAACAGATAAAGAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGTATGAGCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR TCA 90 bp | GCACACTTAAAGGTTCACTCCCAAGAGCAGCATTTTAAGTTCAAATaGTTACAACGGGCAGAGGAGCAACACACACCTAGAATCCTGAAC | + |
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Preference number: 1 (lower is better) Translates to: AHLKVHSQEQHFKFK*LQRAEEQHTPRILN Trigger: GTTCAGGATTCTAGGTGTGTGTTGCTCCTCTGCCCGTTGTAATCATTTGAACTTAAAATGCTGCTCTTGGGAGTGAACCTTTAAGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR-3UTR CCA 90 bp | CACAGATCCAGCTTCCTCCCCTTCCTCCTCCTCTTCCTCCTCCTCCTCTTCCTCTGTTTAAGATGCTTGTaGCAGTCAGCACACTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: HRSSFLPFLLLFLLLLFLCLRCL*QSAHFP Trigger: GGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACA...GAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAAGGGGAGGAAGCTGGATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCTGCTGCTGCGGCTTCTaGTGTGCCCTCCTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: WNACNMVSTHIISYSASSCCCGF*CALLSL Trigger: GAGGGAGAGGAGGGCACAGCAGAAGCCGCAGCAGCA...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCCCCTGTGAAGTGTGGCGCCTACATCTGCCTGTGCTCGCACTGCTCAGTACATCATGTGATCATCTaGAGTAACACCTTCCATAAT | + |
|
Preference number: 2 (lower is better) Translates to: KAPVKCGAYICLCSHCSVHHVII*SNTFHN Trigger: ATTATGGAAGGTGTTACTGCAGATGATCACATGATG...TACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCACGATCGGATTGTTTAAGATGCTTGTGGCAGTCAGCACACTTTCCCTCAAGCCTGCTTCCCTTTaGTGTGGTCAGGAGACTTTA | + |
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Preference number: 2 (lower is better) Translates to: AFTIGLFKMLVAVSTLSLKPASL*CGQETL Trigger: TAAAGTCTCCTGACCACAGCAAAGGGAAGCAGGCTT...GAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCTGGGCAGCAAACTCCTaGGTTCCCTCCTCTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WNACNMVSTHIISYSASSWAANS*VPSSSS Trigger: GGAGGAAGAGGAGGGAACCCAGGAGTTTGCTGCCCA...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CAA 90 bp | CAAAGCGCTCATACCGTGCCTTCACGATCGGATTGTTTAAGATGCTaGTGGCAGTCAGCACACTTTCCCTCTTTATCTGTTCCTTATAAG | + |
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Preference number: 2 (lower is better) Translates to: QSAHTVPSRSDCLRC*WQSAHFPSLSVPYK Trigger: CTTATAAGGAACAGATAAAGAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGTATGAGCGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTAGCCTACATCTGCCTGTaGTCGCACTGCTCAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLAYICL*SHCSVA Trigger: TGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGC...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCAGATCAGTTACAGACTaGCCTCTGAAATGTGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: WNACNMVSTHIISYSASSRSVTD*PLKCVR Trigger: TCTAACACATTTCAGAGGTCAGTCTGTAACTGATCT...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR-3UTR GCA 90 bp | GATGTACACGCTACAAGCACTACAGTGAACAGTCTCCACTTTCATCATGTGATCAATATGTGGAATGCATaGAACATGGTGTCAACTCAT | + |
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Preference number: 2 (lower is better) Translates to: DVHATSTTVNSLHFHHVINMWNA*NMVSTH Trigger: ATGAGTTGACACCATGTTGCATGCATTCCACATATT...GATCACATGATGAAAGTGGAGACTGTTCACTGTAGTGCTTGTAGCGTGTACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CAA 90 bp | TTGCTGAGGTTCATCTTATCCATAGGTTTCGCTAGCTTAGGCTTCTaGATAAAGGCTCCCCCGGGCTTAATAAATATTTGCATCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LLRFILSIGFASLGF*IKAPPGLINICIIF Trigger: AAAAATGATGCAAATATTTATTAAGCCCGGGGGAGCCTTTATCAAGAAGCCTAAGCTAGCGAAACCTATGGATAAGATGAACCTCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCATTTTAAGTTCAAATaGTTACAACGGGCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQHFKFK*LQRAEE Trigger: CTCCTCTGCCCGTTGTAATCATTTGAACTTAAAATG...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR-3UTR TCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCGTCTTCTCAATCACTTaGAATACTTGTGAGCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: WNACNMVSTHIISYSASSVFSIT*NTCELN Trigger: GTTTAGCTCACAAGTATTTCAAGTGATTGAGAAGAC...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCAATATGTGGAATGCATaGAACATGGTGTCAACTCAT | + |
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Preference number: 2 (lower is better) Translates to: WNACNMVSTHIISYSASSNMWNA*NMVSTH Trigger: ATGAGTTGACACCATGTTGCATGCATTCCACATATT...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000138615.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGCTGATCCTGAGGGTGATCTTGAATTTCAAAAGGATTCTCTCCCTTAACATCAGTTTTTGTAGGTaGTTTGCTGAGGTTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: YLLILRVILNFKRILSLNISFCR*FAEVHL Trigger: AAGATGAACCTCAGCAAATCACCTACAAAAACTGAT...GTTAAGGGAGAGAATCCTTTTGAAATTCAAGATCACCCTCAGGATCAGCAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTGCTGATCCTGAGGGTGATCTTGAATTTCAAAAGGATTCTCTCCCTTAACTCTTTTTATTCCTCTTaGAGTAGCAATCGTCACATT | + |
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Preference number: 2 (lower is better) Translates to: YLLILRVILNFKRILSLNSFYSS*SSNRHI Trigger: AATGTGACGATTGCTACTGCAAGAGGAATAAAAAGA...GTTAAGGGAGAGAATCCTTTTGAAATTCAAGATCACCCTCAGGATCAGCAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 72 bp | TGCTCCCTCTGCCTCTCCCACTGCGTCAGCTTCCCCTaGTGCTGCGGCTTCTGCTGTGCCCTCCTCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: CSLCLSHCVSFP*CCGFCCALLSL Trigger: GAGGGAGAGGAGGGCACAGCAGAAGCCGCAGCAGCAGGGGAAGCTGACGCAGTGGGAGAGGCAGAGGGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 72 bp | GCCAGTAAGGCCCCTGTGAAGTGTGGCGCCTACATCTaGCTGTGCTCGCACTGCTCAGTAGCACAGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: ASKAPVKCGAYI*LCSHCSVAQAW Trigger: CCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTTACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 72 bp | GTGAAGTGTGGCGCCTACATCTGCCTGTGCTCGCACTaGTCAGTAGCACAGGCCTGGGCAGCAAACTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VKCGAYICLCSH*SVAQAWAANSW Trigger: CCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCCCTGTGAAGTGTGGCGCCTACATCTGCCTGTGCTCGCACTGCTCAGTAGCTAGCTTAGGCTTCTaGATAAAGGCTCCCCCGGGC | + |
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Preference number: 3 (lower is better) Translates to: KAPVKCGAYICLCSHCSVASLGF*IKAPPG Trigger: GCCCGGGGGAGCCTTTATCAAGAAGCCTAAGCTAGC...TACTGAGCAGTGCGAGCACAGGCAGATGTAGGCGCCACACTTCACAGGGGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGCTCAGTAGCACAGGCCTGGGCAGCAAACTCCTGGGTTCCCTCCTCTTCCATCCTGAGGGTGATCTaGAATTTCAAAAGGATTCTC | + |
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Preference number: 3 (lower is better) Translates to: HCSVAQAWAANSWVPSSSILRVI*NFKRIL Trigger: GAGAATCCTTTTGAAATTCAAGATCACCCTCAGGAT...GGAAGAGGAGGGAACCCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGAGCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR CAA 90 bp | TATCTGCTGATCCTGAGGGTGATCTTGAATTTCAAAAGGATTCTCTCCCTTAACTTCTCGTCTACGTCTTaGCTTCTCTCGCCGAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: YLLILRVILNFKRILSLNFSSTS*LLSPSL Trigger: GAGGCTCGGCGAGAGAAGCAAAGACGTAGACGAGAA...GTTAAGGGAGAGAATCCTTTTGAAATTCAAGATCACCCTCAGGATCAGCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR GCA 72 bp | GCTCATACCGTGCCTTCACGATCGGATTGTTTAAGATaGTTGTGGCAGTCAGCACACTTTCCCTCTTTATCT | + |
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Preference number: 3 (lower is better) Translates to: AHTVPSRSDCLR*LWQSAHFPSLS Trigger: AGATAAAGAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGTATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR CCA 72 bp | ACCGTGCCTTCACGATCGGATTGTTTAAGATGCTTGTaGCAGTCAGCACACTTTCCCTCTTTATCTGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: TVPSRSDCLRCL*QSAHFPSLSVP Trigger: AGGAACAGATAAAGAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTCGTCTACGTCTTTGCTTCTCTCGCCGAGCCTCAATTCGCCGCTTTTCTGTTTTTGTAGGTGATTaGCTGAGGTTCATCTTATCC | + |
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Preference number: 3 (lower is better) Translates to: FSRLRLCFSRRASIRRFSVFVGD*LRFILS Trigger: GGATAAGATGAACCTCAGCAAATCACCTACAAAAAC...AGAAAAGCGGCGAATTGAGGCTCGGCGAGAGAAGCAAAGACGTAGACGAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| 3UTR TCA 72 bp | AAGGTTCACTCCCAAGAGCAGCATTTTAAGTTCAAATaGTTACAACGGGCAGAGGAGCAACACACACCTAGA | + |
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Preference number: 3 (lower is better) Translates to: KVHSQEQHFKFK*LQRAEEQHTPR Trigger: TCTAGGTGTGTGTTGCTCCTCTGCCCGTTGTAATCATTTGAACTTAAAATGCTGCTCTTGGGAGTGAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCCTCGGCCTCGGCCTCTaGCTGTGGATGGTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSLGLGL*LWMVLQ Trigger: TTGGAGGACCATCCACAGGCAGAGGCCGAGGCCGAG...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCCTGCGGCTTCTGCTGTaGCCTCCTCTCCCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSLRLLL*PPLPPH Trigger: ATGTGGAGGGAGAGGAGGGCACAGCAGAAGCCGCAG...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | AGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCATGCTGCTGCGGCTTCTaGTGTGCCCTCCTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKYSKTECTLKGSLPRAACCCGF*CALLSL Trigger: GAGGGAGAGGAGGGCACAGCAGAAGCCGCAGCAGCA...TGCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGGTCAGCTTCCCCTGCTaGTGCGGCTTCTGCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQVSFPC*CGFCCA Trigger: GGCACAGCAGAAGCCGCAGCAGCAGGGGAAGCTGAC...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCTGCGTCAGCTTCCCCTaGTGCTGCGGCTTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSCVSFP*CCGFCC Trigger: ACAGCAGAAGCCGCAGCAGCAGGGGAAGCTGACGCA...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTAAGCTTCCCCTGCTGCTaGGGCTTCTGCTGTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLSFPCC*GFCCAL Trigger: GAGGGCACAGCAGAAGCCGCAGCAGCAGGGGAAGCT...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCAGCTAGACCCGCCCTaGTTTCTACCTCCGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQQLDPP*FLPPKE Trigger: CTCTTTCGGAGGTAGAAACCAGGGCGGGTCTAGCTG...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTATGGGCAGCAAACTCCTaGGTTCCCTCCTCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLWAANS*VPSSSS Trigger: GGAGGAAGAGGAGGGAACCCAGGAGTTTGCTGCCCA...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CCA 90 bp | AGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCATCAGTAGCACAGGCCTaGGCAGCAAACTCCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SKYSKTECTLKGSLPRAASVAQA*AANSWV Trigger: AACCCAGGAGTTTGCTGCCCAGGCCTGTGCTACTGA...TGCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR CAA 72 bp | TTAACAAAGCGCTCATACCGTGCCTTCACGATCGGATaGTTTAAGATGCTTGTGGCAGTCAGCACACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LTKRSYRAFTIG*FKMLVAVSTLS Trigger: GGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGTATGAGCGCTTTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| CDS-3UTR GCA 90 bp | TGCTACAAAGGGAACTGTACACAAAATCCTTTAAGCCATCTTAATGCTAACTGCCATAAGGTCCAAACCTaGTACCCCCACCACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: CYKGNCTQNPLSHLNANCHKVQT*YPHHHH Trigger: GTGGTGGTGGTGGGGGTAGCAGGTTTGGACCTTATG...GCAGTTAGCATTAAGATGGCTTAAAGGATTTTGTGTACAGTTCCCTTTGTAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CCA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGGCCTCTGCCTGTGGATaGTCCTCCAAAAGCATCATA | + |
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Preference number: 4 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRASACG*SSKSII Trigger: TATGATGCTTTTGGAGGACCATCCACAGGCAGAGGC...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR CAA 72 bp | CATACCGTGCCTTCACGATCGGATTGTTTAAGATGCTaGTGGCAGTCAGCACACTTTCCCTCTTTATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: HTVPSRSDCLRC*WQSAHFPSLSV Trigger: AACAGATAAAGAGGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACAATCCGATCGTGAAGGCACGGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
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| CDS-3UTR GCA 90 bp | TGCTACAAAGGGAACTGTACACAAAATCCTTTAAGCCATCTTAATGCTAACTGCTCTCGTCTACGTCTTTaGTTCTCTCGCCGAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: CYKGNCTQNPLSHLNANCSRLRL*FSRRAS Trigger: TGAGGCTCGGCGAGAGAAGCAAAGACGTAGACGAGA...GCAGTTAGCATTAAGATGGCTTAAAGGATTTTGTGTACAGTTCCCTTTGTAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR GCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGAAGCCTGCTTCCCTTTaGTGTGGTCAGGAGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQKPASL*CGQETL Trigger: TAAAGTCTCCTGACCACAGCAAAGGGAAGCAGGCTT...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCTCGGATTGTTTAAGATaGTTGTGGCAGTCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSSDCLR*LWQSAH Trigger: GTGTGCTGACTGCCACAAGCATCTTAAACAATCCGA...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQLGRNP*ISDPHR Trigger: CCTATGGGGGTCAGAGATCCATGGATTCCTACCTAA...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CCA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQHPEKT*SRKTHK Trigger: CTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTG...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CCA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGTGTTTAAGATGCTTGTaGCAGTCAGCACACTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRCLRCL*QSAHFP Trigger: GGGAAAGTGTGCTGACTGCCACAAGCATCTTAAACA...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CCA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGCTTCCTCTTCCTCGATaGGTTCACCAATCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRLPLPR*VHQSSL Trigger: AAGAGAAGATTGGTGAACCCATCGAGGAAGAGGAAG...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| 3UTR CAA 72 bp | TTCATCTTATCCATAGGTTTCGCTAGCTTAGGCTTCTaGATAAAGGCTCCCCCGGGCTTAATAAATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FILSIGFASLGF*IKAPPGLINIC Trigger: GCAAATATTTATTAAGCCCGGGGGAGCCTTTATCAAGAAGCCTAAGCTAGCGAAACCTATGGATAAGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
||
| CDS-3UTR TCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCTTAGATAAATATCCTTaGATGCCAGACCTCCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSLDKYP*MPDLRK Trigger: CTTACGGAGGTCTGGCATTCAAGGATATTTATCTAA...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACACTGTGATTGTCCATaGCATAGGACTGGTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLHCDCP*HRTGLG Trigger: ACCTAAACCAGTCCTATGGCATGGACAATCACAGTG...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR GCA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGGGGGTGAAGAAAAACTaGTGTAGGAAGAGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRGVKKN*CRKSNS Trigger: AGAATTACTCTTCCTACAGCAGTTTTTCTTCACCCC...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCATTTTAAGTTCAAATGATTACAACGGGCAGAGGAGCAACACACACAAGCATCATAGCTTCTaGTTCCAAACGTACTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSSILSSNDYNGQRSNTHKHHSF*FQTYFQ Trigger: CTGAAAGTACGTTTGGAAGCAGAAGCTATGATGCTT...GTGTGTGTTGCTCCTCTGCCCGTTGTAATCATTTGAACTTAAAATGCTGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTATCTGCTGATCCTGAGGGTGATCTTGAATTTCAAAAGGATTCTCTCCATAAATATCCTTGAATaGCAGACCTCCGTAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYLLILRVILNFKRILSINILE*QTSVRS Trigger: GGATCTTACGGAGGTCTGGCATTCAAGGATATTTAT...GGAGAGAATCCTTTTGAAATTCAAGATCACCCTCAGGATCAGCAGATAGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
||
| CDS-3UTR TCA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGATCAGTTTTTGTAGGTaGTTTGCTGAGGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRISFCR*FAEVHL Trigger: AAGATGAACCTCAGCAAATCACCTACAAAAACTGAT...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR TCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTATCTAATGTTTCCTGGTaGGAAGAACTTTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLSNVSW*EELSRC Trigger: GCATCTGGAAAGTTCTTCTCACCAGGAAACATTAGA...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR GCA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCCATCATGTGATCATCTaGAGTAACACCTTCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNACNMVSTHIISYSASSHHVII*SNTFHN Trigger: ATTATGGAAGGTGTTACTGCAGATGATCACATGATG...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| 3UTR CAA 72 bp | TCTTGCAGTAGCAATCGTCACATTGGCAGGTTTGTTTaGATAGTCAACAATAATTCCAGGTCTATGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSSNRHIGRFV*IVNNNSRSMEA Trigger: AGCTTCCATAGACCTGGAATTATTGTTGACTATCAAAACAAACCTGCCAATGTGACGATTGCTACTGCAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCATTTTAAGTTCAAATGATTACAACGGGCAGAGGAGCAACACACACTCTTTTTATTCCTCTTaGAGTAGCAATCGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: KSSILSSNDYNGQRSNTHSFYSS*SSNRHI Trigger: AATGTGACGATTGCTACTGCAAGAGGAATAAAAAGA...GTGTGTGTTGCTCCTCTGCCCGTTGTAATCATTTGAACTTAAAATGCTGCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CCA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTAATAATTCCAGGTCTATaGAAGCTTCCAAAATCACCC | + |
|
Preference number: 4 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLIIPGL*KLPKSP Trigger: GGGTGATTTTGGAAGCTTCCATAGACCTGGAATTAT...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS GCA 90 bp | CTCGGCCTCTGCCTGTGGATGGTCCTCCAAAAGCATCATAGCTTCTaGTTCCAAACGTACTTTCAGGATAAGCAGGCGTTCCTCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLCLWMVLQKHHSF*FQTYFQDKQAFLSP Trigger: GGGGGAGAGGAACGCCTGCTTATCCTGAAAGTACGTTTGGAAGCAGAAGCTATGATGCTTTTGGAGGACCATCCACAGGCAGAGGCCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
||
| CDS GCA 90 bp | AAGGTCCAAACCTGCTACCCCCACCACCACCACTGTGATTGTCCATaGCATAGGACTGGTTTAGGTAGGAATCCATGGATCTCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVQTCYPHHHHCDCP*HRTGLGRNPWISDP Trigger: GGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCCTATGGCATGGACAATCACAGTGGTGGTGGTGGGGGTAGCAGGTTTGGACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CCA 90 bp | AACCATAGCCAGATCTGTACAGATCTCGCCCACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAGGTCCAAACCTGCTACCCCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: NHSQICTDLAHPEKT*SRKTHKVQTCYPHH Trigger: GTGGTGGGGGTAGCAGGTTTGGACCTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTGGCTATGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CCA 90 bp | AGCTTCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTaGATGGTCCTCCAAAAGCATCATAGCTTCTGCTTCCAAACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SFQNHPYVLGLGLCL*MVLQKHHSFCFQTY Trigger: GTACGTTTGGAAGCAGAAGCTATGATGCTTTTGGAGGACCATCCACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
||
| CDS GCA 90 bp | GTGAAGAAAAACTGCTACCCCCACCACCACCACTGTGATTGTCCATaGCATAGGACTGGTTTAGGTAGGAATCCATGGATCTCTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VKKNCYPHHHHCDCP*HRTGLGRNPWISDP Trigger: GGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCCTATGGCATGGACAATCACAGTGGTGGTGGTGGGGGTAGCAGTTTTTCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000150440.8 |
||
| CDS CCA 90 bp | TCCAAAATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTGGATaGTCCTCCAAAAGCATCATAGCTTCTGCTTCCAAACGTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKITHMSSASASACG*SSKSIIASASKRTF Trigger: GAAAGTACGTTTGGAAGCAGAAGCTATGATGCTTTTGGAGGACCATCCACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
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| CDS CCA 90 bp | CACTGTGATTGTCCATGCCATAGGACTGGTTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGGATCCATGGCCATAGTCACGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HCDCPCHRTGLGRNP*ISDPHRIHGHSHDP Trigger: TGGATCGTGACTATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCCTATGGCATGGACAATCACAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
||
| CDS-3UTR CAA 90 bp | CAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTACGGTTCTCGTCTACGTCTTaGCTTCTCTCGCCGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QHGVNSYHKLLSIFHSLRFSSTS*LLSPSL Trigger: GAGGCTCGGCGAGAGAAGCAAAGACGTAGACGAGAA...CCGTAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CAA 90 bp | TGCTACAAAGGGAACTGTACACAAAATCCTTTAAGCCATCTTAATGCTAACTGCGCTAGCTTAGGCTTCTaGATAAAGGCTCCCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CYKGNCTQNPLSHLNANCASLGF*IKAPPG Trigger: GCCCGGGGGAGCCTTTATCAAGAAGCCTAAGCTAGC...GCAGTTAGCATTAAGATGGCTTAAAGGATTTTGTGTACAGTTCCCTTTGTAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CAA 90 bp | AGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCAACCCAGGCCTCAATTTaGAACGGGAGTAAGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKYSKTECTLKGSLPRAATQASI*NGSKVL Trigger: AAGCACCTTACTCCCGTTCAAAATTGAGGCCTGGGT...TGCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
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| CDS-3UTR CAA 90 bp | ATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCATTCTCTAACCTCCGAAGCGGGTTaGTTCGGGTTCATTAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: MQHGVNSYHKLLSIFHSLTSEAG*FGFIKT Trigger: GGTTTTAATGAACCCGAACAAACCCGCTTCGGAGGT...TAGAGAATGGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCAGATTGTTTAAGATGCTaGTGGCAGTCAGCACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKYSKTECTLKGSLPRAADCLRC*WQSAHF Trigger: AAAGTGTGCTGACTGCCACAAGCATCTTAAACAATC...TGCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS TCA 90 bp | ATGCTTTACTGGCACTCAAAAGAAGAATTTTTAGATAAATATCCTTaGATGCCAGACCTCCGTAAGATCCAGGGCCATAATCACGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: MLYWHSKEEFLDKYP*MPDLRKIQGHNHDP Trigger: TGGATCGTGATTATGGCCCTGGATCTTACGGAGGTCTGGCATTCAAGGATATTTATCTAAAAATTCTTCTTTTGAGTGCCAGTAAAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138615.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGGTTTTTGTAGGTGATTaGCTGAGGTTCATCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSTQKLNAHLKVHSQEQVFVGD*LRFILS Trigger: GGATAAGATGAACCTCAGCAAATCACCTACAAAAAC...CTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CAA 90 bp | TGGAATGCATGCAACATGGTGTCAACTCATATCATAAGCTACTCAGCATCTTCCGTGATTAAGTGTCTGTaGCTTACGAATAGATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WNACNMVSTHIISYSASSVIKCL*LTNRCF Trigger: AAAGCATCTATTCGTAAGCAACAGACACTTAATCAC...GGAAGATGCTGAGTAGCTTATGATATGAGTTGACACCATGTTGCATGCATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTACTCAAAAACTGAATGCACACTTAAAGGTTCACTCCCAAGAGCAGCAATCCTGAGGGTGATCTaGAATTTCAAAAGGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKYSKTECTLKGSLPRAAILRVI*NFKRIL Trigger: GAGAATCCTTTTGAAATTCAAGATCACCCTCAGGAT...TGCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS TCA 72 bp | TCTTCCTCTGTCCTCCATAAACCCAGGCCTCAATTTTaGACGGGAGTAAGGTGCTTCCCAGCTAGACCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSVLHKPRPQF*TGVRCFPARPA Trigger: GGCGGGTCTAGCTGGGAAGCACCTTACTCCCGTTCAAAATTGAGGCCTGGGTTTATGGAGGACAGAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CCA 72 bp | AATCACCCATATGTCCTCGGCCTCGGCCTCTGCCTGTaGATGGTCCTCCAAAAGCATCATAGCTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NHPYVLGLGLCL*MVLQKHHSFCF Trigger: GAAGCAGAAGCTATGATGCTTTTGGAGGACCATCCACAGGCAGAGGCCGAGGCCGAGGACATATGGGTGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
||
| CDS CCA 72 bp | CAGATCTGTACAGATCTCGCCCACCCAGAGAAGACCTaGAGTCGTAAGACTCATAAGGTCCAAACCTGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QICTDLAHPEKT*SRKTHKVQTCY Trigger: GTAGCAGGTTTGGACCTTATGAGTCTTACGACTCCAGGTCTTCTCTGGGTGGGCGAGATCTGTACAGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CCA 72 bp | TGTCCATGCCATAGGACTGGTTTAGGTAGGAATCCATaGATCTCTGACCCCCATAGGATCCATGGCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: CPCHRTGLGRNP*ISDPHRIHGHS Trigger: ACTATGGCCATGGATCCTATGGGGGTCAGAGATCCATGGATTCCTACCTAAACCAGTCCTATGGCATGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
||
| CDS CAA 90 bp | GTAGGAGCTCTCAAATCGACCACCATAACTACCTCCGAAGCGGGTTaGTTCGGGTTCATTAAAACCATAGCCAGATCTGTACAGATCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VGALKSTTITTSEAG*FGFIKTIARSVQIS Trigger: CGAGATCTGTACAGATCTGGCTATGGTTTTAATGAACCCGAACAAACCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CAA 72 bp | CTCAAATCGACCACCATAACTACCTCCGAAGCGGGTTaGTTCGGGTTCATTAAAACCATAGCCAGATCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LKSTTITTSEAG*FGFIKTIARSV Trigger: TACAGATCTGGCTATGGTTTTAATGAACCCGAACAAACCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031227.11 |
||
| CDS CAA 90 bp | TTTTATTCCTCTTGCAGTAGCAATCGTCACATTGGCAGGTTTGTTTaGATAGTCAACAATAATTCCAGGTCTATGGAAGCTTCCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: FYSSCSSNRHIGRFV*IVNNNSRSMEASKI Trigger: GATTTTGGAAGCTTCCATAGACCTGGAATTATTGTTGACTATCAAAACAAACCTGCCAATGTGACGATTGCTACTGCAAGAGGAATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031227.11 ENSMUST00000150440.8 |
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