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Pregenerated sensors for ZFP319 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046556

Ensembl transcript IDs: ENSMUST00000057717.8

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAATACCGAACATGCGCACCCTCCACCTGCCCAGAAGAGCCCTTTaGTCCCGACTCCTGAGGAGGCAGCTGACTGACAGGCTTGCTGCC +
Preference number: 1 (lower is better)
Translates to: RIPNMRTLHLPRRAL*SRLLRRQLTDRLAA
Trigger: GGCAGCAAGCCTGTCAGTCAGCTGCCTCCTCAGGAGTCGGGACCAAAGGGCTCTTCTGGGCAGGTGGAGGGTGCGCATGTTCGGTATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp CCTCACCCTGGATACCTGGGACTCCCTTTGGCCCTCAGGCAGGGCTaGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCACAT +
Preference number: 1 (lower is better)
Translates to: PHPGYLGLPLALRQG*DKPMTLSPGHFGSH
Trigger: ATGTGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAGGTATCCAGGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp CTCCACTTCCACACCGCAGCTCTGCTCTGGGCACACTCATTCCCCTaGAGCTCAGAACCACTCACAGGCAGGAGAGTCTTCCACAGACTC +
Preference number: 1 (lower is better)
Translates to: LHFHTAALLWAHSFP*SSEPLTGRRVFHRL
Trigger: GAGTCTGTGGAAGACTCTCCTGCCTGTGAGTGGTTCTGAGCTGCAGGGGAATGAGTGTGCCCAGAGCAGAGCTGCGGTGTGGAAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp GACAAGGAGCCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTaGGAAATGGAGGCTTGTGAGCTGCAGCTGAGGACAAGGATGGTG +
Preference number: 1 (lower is better)
Translates to: DKEPLASSLQPDSGL*EMEACELQLRTRMV
Trigger: CACCATCCTTGTCCTCAGCTGCAGCTCACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGGCTCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp GGGTGGGGACATGGAGAGGAGGGAGCTTCCTGCCTCCCCACAGACTaGCCTTTACAGGATCCTACAGCAGAGATCTCTGGGAATGTAGAC +
Preference number: 1 (lower is better)
Translates to: GWGHGEEGASCLPTD*PLQDPTAEISGNVD
Trigger: GTCTACATTCCCAGAGATCTCTGCTGTAGGATCCTGTAAAGGTCAGTCTGTGGGGAGGCAGGAAGCTCCCTCCTCTCCATGTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp CCTCGCCCCAACCTGCTCCTTTGGTCTGCTTTGTGTCTCAGCCTCTaGACCTCCCAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: PRPNLLLWSALCLSL*TSQQTLCKERVEEL
Trigger: CAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp ACAGCCAGAAGCCTCAAAGCTCAGGATTCAAGCCTCGCCCCAACCTaGTCCTTTGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAAC +
Preference number: 1 (lower is better)
Translates to: TARSLKAQDSSLAPT*SFGLLCVSASAPPN
Trigger: GTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCTTTGAGGCTTCTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp AGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACGGGACAAAGGTCTaGTCTGGAGGAAGAACAGGGCTACAGGCCAGGAGGGACATTACT +
Preference number: 1 (lower is better)
Translates to: SLGDSCRVVQHGTKV*SGGRTGLQARRDIT
Trigger: AGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTTCCTCCAGAGCAGACCTTTGTCCCGTGCTGGACTACTCTGCAGGAGTCCCCCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp ATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTaGAGAGTAGTCCAGCACGGGACAAAGGTCTGCTCTGGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: MQALSPESAVSLGDS*RVVQHGTKVCSGGR
Trigger: TCTTCCTCCAGAGCAGACCTTTGTCCCGTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp GTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTaGGGTCTGGCCACTGCAGTTTGGCTCTTCCCACGGCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: VLRKQVLSWGRSGWN*GLATAVWLFPRPGW
Trigger: CCAGCCTGGCCGTGGGAAGAGCCAAACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp CTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTaGCTGTTTCGGGGGACTCACATCTGTGGCCAGCAGGCTTACTTG +
Preference number: 1 (lower is better)
Translates to: LPSPQSSQRPQVQGS*LFRGTHICGQQAYL
Trigger: CAAGTAAGCCTGCTGGCCACAGATGTGAGTCCCCCGAAACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp CATCCAGTGATGGTGGCTGACCGTGTACCTACCAAGAATGCTGCCTaGTGGGCTTCCCACTCCTTGTGTACCCACATCTGCTACAGGAAG +
Preference number: 1 (lower is better)
Translates to: HPVMVADRVPTKNAA*WASHSLCTHICYRK
Trigger: CTTCCTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGTACACGGTCAGCCACCATCACTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp TGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTaGAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTC +
Preference number: 1 (lower is better)
Translates to: WSALCLSLCTSQQTL*KERVEELWAAPVNV
Trigger: GACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp AAGCCTCAAAGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTTaGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTC +
Preference number: 1 (lower is better)
Translates to: KPQSSGFKPRPNLLL*SALCLSLCTSQQTL
Trigger: GAGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCTTTGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp CTGCTCTGGAGGAAGAACAGGGCTACAGGCCAGGAGGGACATTACTaGTTGGAGATGACATTTCATGACAGTGCTGGAAGGTGCAGGCCC +
Preference number: 1 (lower is better)
Translates to: LLWRKNRATGQEGHY*LEMTFHDSAGRCRP
Trigger: GGGCCTGCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTTCCTCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp GGAAGAAGCAAACATAGGATTGTAGAGCCAGGCTGGGTGGGGACATaGAGAGGAGGGAGCTTCCTGCCTCCCCACAGACTGACCTTTACA +
Preference number: 1 (lower is better)
Translates to: GRSKHRIVEPGWVGT*RGGSFLPPHRLTFT
Trigger: TGTAAAGGTCAGTCTGTGGGGAGGCAGGAAGCTCCCTCCTCTCCATGTCCCCACCCAGCCTGGCTCTACAATCCTATGTTTGCTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp GGCAGAAGGGCAGGCTCAGAAATAAGGCTCACACTGAGATGGGGGTaGGGTGGAGATGACACGGCCCAGGTGTCAGTGGACATTTTTACT +
Preference number: 1 (lower is better)
Translates to: GRRAGSEIRLTLRWG*GGDDTAQVSVDIFT
Trigger: AGTAAAAATGTCCACTGACACCTGGGCCGTGTCATCTCCACCCCACCCCCATCTCAGTGTGAGCCTTATTTCTGAGCCTGCCCTTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp TCAAAGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTTGGTCTaGTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: SKLRIQASPQPAPLV*FVSQPLHLPTNPLQ
Trigger: TTGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp CACTGTAGGGCAGACCAAAGAGGAGTGTGGGCCAGCCGGGCTAGGTaGGGCCACCACTGTTCCAGGAAGCACCTGAATACATTTATTTAT +
Preference number: 1 (lower is better)
Translates to: HCRADQRGVWASRAR*GHHCSRKHLNTFIY
Trigger: ATAAATAAATGTATTCAGGTGCTTCCTGGAACAGTGGTGGCCCCACCTAGCCCGGCTGGCCCACACTCCTCTTTGGTCTGCCCTACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp GGAAGAACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATaGCATTTCATGACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACC +
Preference number: 1 (lower is better)
Translates to: GRTGLQARRDITGWR*HFMTVLEGAGPLRT
Trigger: GGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp GTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTaGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAG +
Preference number: 1 (lower is better)
Translates to: VSASAPPNKPSAKNE*KSCGLHRSMSLLLE
Trigger: CTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp CTGGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCACATaGCATAGGAAGGGACCTGTTTACATCTGCCGGGAAATCATAGGC +
Preference number: 1 (lower is better)
Translates to: LGQAYDSEPRTLWFT*HRKGPVYICREIIG
Trigger: GCCTATGATTTCCCGGCAGATGTAAACAGGTCCCTTCCTATGTCATGTGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp AAGACCATACAGCTGGTGACCGGCAAAACTAGGAACCGAAGGCAGTaGGACTGTGATCTACTTCTTTCCTGCTCCGAGGAGCAAGCCAAG +
Preference number: 1 (lower is better)
Translates to: KTIQLVTGKTRNRRQ*DCDLLLSCSEEQAK
Trigger: CTTGGCTTGCTCCTCGGAGCAGGAAAGAAGTAGATCACAGTCTCACTGCCTTCGGTTCCTAGTTTTGCCGGTCACCAGCTGTATGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp AGGTATGCTGCATTGGTAGCTGTTGGCTTGTCTGTGGCTTCCCTGTaGGGTCTCAACAATGATTCCATGCAACTCTCACAACAGTGGGGC +
Preference number: 1 (lower is better)
Translates to: RYAALVAVGLSVASL*GLNNDSMQLSQQWG
Trigger: GCCCCACTGTTGTGAGAGTTGCATGGAATCATTGTTGAGACCCCACAGGGAAGCCACAGACAAGCCAACAGCTACCAATGCAGCATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp AGGACCTGCCTCTCTGTCTGCACAGGAAGGTGGACAACAGTAATTTaGATCTGTGAAGAAGCTGAACACCATCTGGGGCAGGGAGAGCAT +
Preference number: 1 (lower is better)
Translates to: RTCLSVCTGRWTTVI*ICEEAEHHLGQGEH
Trigger: ATGCTCTCCCTGCCCCAGATGGTGTTCAGCTTCTTCACAGATCCAAATTACTGTTGTCCACCTTCCTGTGCAGACAGAGAGGCAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp AGTGGCATACACTTAAGAGTCCCAAACAATGGGGAGGCTGAGGCATaGCTGATGTCCCAGGAGTTTGTGACTAGCCTGGGAAACAGACAT +
Preference number: 1 (lower is better)
Translates to: SGIHLRVPNNGEAEA*LMSQEFVTSLGNRH
Trigger: ATGTCTGTTTCCCAGGCTAGTCACAAACTCCTGGGACATCAGTCATGCCTCAGCCTCCCCATTGTTTGGGACTCTTAAGTGTATGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 90 bp TGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTaGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAA +
Preference number: 1 (lower is better)
Translates to: CTSQQTLCKERVEEL*AAPVNVFTSRAHVK
Trigger: TTTGACATGTGCTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTGGGAGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 90 bp TCAATTCTGAAACTCTTCACTCTCTCGTGTGACGCTCGTGCCTTATaGCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGC +
Preference number: 1 (lower is better)
Translates to: SILKLFTLSCDARAL*LANSRYSRYGCGRS
Trigger: GCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAAGGCACGAGCGTCACACGAGAGAGTGAAGAGTTTCAGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 90 bp CTCTGGGGCCTCCAGAACCATGCAGATATATCTATCTGGACAGAATaGAATTTCTACTATAAAGTAACAGTAATGTTTATTACAGAGCAA +
Preference number: 1 (lower is better)
Translates to: LWGLQNHADISIWTE*NFYYKVTVMFITEQ
Trigger: TTGCTCTGTAATAAACATTACTGTTACTTTATAGTAGAAATTTCATTCTGTCCAGATAGATATATCTGCATGGTTCTGGAGGCCCCAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCGTGGACAGCCCTGGCTaGACTGAGGGTGTCGTGGAA +
Preference number: 2 (lower is better)
Translates to: DGMQALSPESAVSLGDSCVDSPG*TEGVVE
Trigger: TTCCACGACACCCTCAGTTCAGCCAGGGCTGTCCAC...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCAACCGCAGCTCTGCTCTaGGCACACTCATTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: LRQGWDKPMTLSPGHFGSTAALL*AHSFPC
Trigger: GCAGGGGAATGAGTGTGCCCAGAGCAGAGCTGCGGT...TGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGTTGCTGCCATGCAGCTaGAAGCAGGCAAGACTAGAC +
Preference number: 2 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQLLPCS*KQARLD
Trigger: GTCTAGTCTTGCCTGCTTGCAGCTGCATGGCAGCAA...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCACCTGGGACTCCCTTTaGCCCTCAGGCAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSTWDSL*PSGRAG
Trigger: CCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAGGT...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCTCTCCAGCCCGACTCTaGCCTTTGGGAAATGGAGGC +
Preference number: 2 (lower is better)
Translates to: DGMQALSPESAVSLGDSCSPARL*PLGNGG
Trigger: GCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGA...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGAGGAGGCAGCTGACTaGCAGGCTTGCTGCCATGCA +
Preference number: 2 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCEEAAD*QACCHA
Trigger: TGCATGGCAGCAAGCCTGTCAGTCAGCTGCCTCCTC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCCTGGCCACTGCAGTTTaGCTCTTCCCACGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSLATAV*LFPRPG
Trigger: GCCTGGCCGTGGGAAGAGCCAAACTGCAGTGGCCAG...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACACGATCCTTAGGGCCTaGGGGCTCTGTGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHTILRA*GLCGGK
Trigger: CTTACCCCCACAGAGCCCCCAGGCCCTAAGGATCGT...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp GGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATaGGGGTCTGGCCACTGCAGTTTGGCTCTTCCCACGGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GSQKASPVMGKKWME*GSGHCSLALPTARL
Trigger: CAGCCTGGCCGTGGGAAGAGCCAAACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp GCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTaGGCTGTTTCGGGGGACTCACATCTGTGGCCAGCAGGCTTACTT +
Preference number: 2 (lower is better)
Translates to: APFSPVFPKTTSTGL*AVSGDSHLWPAGLL
Trigger: AAGTAAGCCTGCTGGCCACAGATGTGAGTCCCCCGAAACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCGCTTCTGGCCTTTCATaGGTTGCTGGTCTCTCATGG +
Preference number: 2 (lower is better)
Translates to: DGMQALSPESAVSLGDSCASGLS*VAGLSW
Trigger: CCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGC...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp GACTGTGTCCCAAAGAGGTTAAGTGACCGGTCCAAGCTTACACAGCCAGAAGCCCCCAGAAGAGCCCTTTaGTCCCGACTCCTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: DCVPKRLSDRSKLTQPEAPRRAL*SRLLRR
Trigger: CCTCCTCAGGAGTCGGGACCAAAGGGCTCTTCTGGG...GGCTTCTGGCTGTGTAAGCTTGGACCGGTCACTTAACCTCTTTGGGACACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGGAACTGAGGGTGTCGTaGAATGTTTCTGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRELRVS*NVSASP
Trigger: GGGGGAAGCAGAAACATTCCACGACACCCTCAGTTC...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAAGAATGCTGCCTGCTaGGCTTCCCACTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: DGMQALSPESAVSLGDSCKNAAC*ASHSLC
Trigger: ACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTT...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp GACCGTGTACCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTaGTGTACCCACATCTGCTACAGGAAGCAGGCTGTGAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: DRVPTKNAACWASHS*CTHICYRKQAVRSQ
Trigger: TTGGCTTCTCACAGCCTGCTTCCTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGTACACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp GAAGCCTCAAAGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTaGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCT +
Preference number: 2 (lower is better)
Translates to: EASKLRIQASPQPAP*VCFVSQPLHLPTNP
Trigger: AGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCTTTGAGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp TCACAGGCAGGAGAGTCTTCCACAGACTCAGGACATGGGCTGCTTGTGTCCCTTCAGCCCTGGCTGAACTaGGGGTGTCGTGGAATGTTT +
Preference number: 2 (lower is better)
Translates to: SQAGESSTDSGHGLLVSLQPWLN*GCRGMF
Trigger: AAACATTCCACGACACCCTCAGTTCAGCCAGGGCTG...AAGGGACACAAGCAGCCCATGTCCTGAGTCTGTGGAAGACTCTCCTGCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCACAGGAAGCAGGCTGTaGGAAGCCAAAGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPTGSRL*EAKDLG
Trigger: CCCCAGGTCTTTGGCTTCTCACAGCCTGCTTCCTGT...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTAGCCTCGCCCCAACCTaGTCCTTTGGTCTGCTTTGT +
Preference number: 2 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCSLAPT*SFGLLC
Trigger: ACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCT...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCAAGCAAGTCCTGTCATaGGGAAGAAGTGGATGGAAT +
Preference number: 2 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSKQVLS*GRSGWN
Trigger: ATTCCATCCACTTCTTCCCCATGACAGGACTTGCTT...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTGGCATCCCCGACTCCTaGGGCAGAGAGGCACCTGAT +
Preference number: 2 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLGIPDS*GREAPD
Trigger: ATCAGGTGCCTCTCTGCCCCAGGAGTCGGGGATGCC...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCCCCCACCCTGATTaGGCCCCTAGTCTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPFPHPD*APSLQA
Trigger: TGCTTGGAGACTAGGGGCCCAATCAGGGTGGGGGAA...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGGGAGAGCATTTTGTTaGCTTGATTCCCCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCGRAFC*LDSPGQ
Trigger: CTGGCCAGGGGAATCAAGGCAACAAAATGCTCTCCC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCGTGTCCCTTTCTCTGTaGACAGCCCTGGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPVSLSL*TALAEL
Trigger: CAGTTCAGCCAGGGCTGTCCACAGAGAAAGGGACAC...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACTCTGCAAAGAACGAGTaGAAGAGCTGTGGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHSAKNE*KSCGLH
Trigger: GTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGA...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCCTGGCCTTTGGGAAATaGAGGCTTGTGAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPLAFGK*RLVSCS
Trigger: GCTGCAGCTCACAAGCCTCCATTTCCCAAAGGCCAG...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTACACTGAGATGGGGGTaGGGTGGAGATGACACGGCC +
Preference number: 2 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLTLRWG*GGDDTA
Trigger: GGCCGTGTCATCTCCACCCCACCCCCATCTCAGTGT...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp CTCTGGAGGAAGAACAGGGCTACAGGCCAGGAGGGACATTACTGGTaGGAGATGACATTTCATGACAGTGCTGGAAGGTGCAGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: LWRKNRATGQEGHYW*EMTFHDSAGRCRPF
Trigger: AAAGGGCCTGCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTTCCTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCGCTGGACTTTTCAGATaGGGTGAGGTGGTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSAGLFR*GEVVSS
Trigger: GGAGGAAACCACCTCACCTCATCTGAAAAGTCCAGC...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGCCAGCAGGCTTACTTaGCAGCTCCTTTTACCTTCT +
Preference number: 2 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCASRLT*QLLLPS
Trigger: AGAAGGTAAAAGGAGCTGGCAAGTAAGCCTGCTGGC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp ACCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGAGAAGTGGATGGAATTaGGGTCTGGCCACTGCAGTT +
Preference number: 2 (lower is better)
Translates to: TYQECCLLGFPLLVYPHLRSGWN*GLATAV
Trigger: AACTGCAGTGGCCAGACCCCAATTCCATCCACTTCT...CAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACCGAGTGGAAGAGCTGTaGGCTGCACCGGTCAATGTC +
Preference number: 2 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDRVEEL*AAPVNV
Trigger: GACATTGACCGGTGCAGCCCACAGCTCTTCCACTCG...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp ACTGCTCAGGGACAAAAACGCTTTGTTAAGGATGGGATGCAGGCCTaGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTA +
Preference number: 2 (lower is better)
Translates to: TAQGQKRFVKDGMQA*SPESAVSLGDSCRV
Trigger: TACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATCCTTAACAAAGCGTTTTTGTCCCTGAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGTCAACAATGATTCCATaGAACTCTCACAACAGTGGG +
Preference number: 2 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRSTMIP*NSHNSG
Trigger: CCCACTGTTGTGAGAGTTGCATGGAATCATTGTTGA...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTAGGGGTGAGGTATGCTaGATTGGTAGCTGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: CHLQLLAFHELLVSHGPARGEVC*IGSCWL
Trigger: AAGCCAACAGCTACCAATGCAGCATACCTCACCCCT...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACGGCCCTTTAAGGACCTaGCTCTCTGTCTGCACAGGA +
Preference number: 2 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDGPLRT*LSVCTG
Trigger: TCCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCC...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCGCAACATGGAGAACATaGATCCTAGCCCAGGGTCTA +
Preference number: 2 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPATWRT*ILAQGL
Trigger: TAGACCCTGGGCTAGGATGCATGTTCTCCATGTTGC...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACACTAGGCTGAAGAGCTaGGAAAATTGGGTTGGCATC +
Preference number: 2 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHTRLKS*ENWVGI
Trigger: GATGCCAACCCAATTTTCCCAGCTCTTCAGCCTAGT...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACCTGTTGGCTTGTCTGTaGCTTCCCTGTGGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDLLACL*LPCGVS
Trigger: TGAGACCCCACAGGGAAGCCACAGACAAGCCAACAG...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTGTCGTGGAATGTTTCTaGTTCCCCCACCCTGATTGG +
Preference number: 2 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLVVECF*FPHPDW
Trigger: CCAATCAGGGTGGGGGAAGCAGAAACATTCCACGAC...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCCACGGGACAAAGGTCTaGTCTGGAGGAAGAACAGGG +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFHGTKV*SGGRTG
Trigger: CCCTGTTCTTCCTCCAGAGCAGACCTTTGTCCCGTG...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACGTCATGGGGAAGAAGTaGATGGAATTGGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDVMGKK*MELGSG
Trigger: GCCAGACCCCAATTCCATCCACTTCTTCCCCATGAC...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACATTACTGGTTGGAGATaGCATTTCATGACAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHITGWR*HFMTVL
Trigger: CAGCACTGTCATGAAATGTCATCTCCAACCAGTAAT...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTGTACCTACCAAGAATaGTGCCTGCTGGGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFCTYQE*CLLGFP
Trigger: TGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGTACA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCAAGGGGCATGGTCAGTaGTGGGTTCAGAACGATGAC +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFKGHGQ*WVQNDD
Trigger: GTCATCGTTCTGAACCCAGCACTGACCATGCCCCTT...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCTTGTTTGTCTTTGGGTaGACATACACGCAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSLFVFG*TYTQRV
Trigger: TACCCTCTGCGTGTATGTGCACCCAAAGACAAACAA...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTAAGCTGAACACCATCTaGGGCAGGGAGAGCATTTTG +
Preference number: 2 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLKLNTI*GRESIL
Trigger: CAAAATGCTCTCCCTGCCCCAGATGGTGTTCAGCTT...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTTGGGGTCTGGCCACTaGAGTTTGGCTCTTCCCACG +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHLGSGH*SLALPT
Trigger: CGTGGGAAGAGCCAAACTGCAGTGGCCAGACCCCAA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTTCTCTATCAAAAACTTaGGGTTGGGGCACATTTGTC +
Preference number: 2 (lower is better)
Translates to: CHLQLLAFHELLVSHGPASLSKT*GWGTFV
Trigger: GACAAATGTGCCCCAACCCCAAGTTTTTGATAGAGA...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTTGTTAAGGATGGGATaGAGGCCTTGTCACCAGAGT +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFLLRMG*RPCHQS
Trigger: ACTCTGGTGACAAGGCCTGCATCCCATCCTTAACAA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTGCCTCCCCACAGACTaGCCTTTACAGGATCCTACA +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHCLPTD*PLQDPT
Trigger: TGTAGGATCCTGTAAAGGTCAGTCTGTGGGGAGGCA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCAGCCTTGAAATGATCTaGACAGGACTGTTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFSLEMI*TGLFQS
Trigger: AGACTGGAACAGTCCTGTCCAGATCATTTCAAGGCT...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 90 bp TACTTAATTTATTTTTGCCATCTGCAGCTTCTGGCCTTTCATGAGTaGCTGGTCTCTCATGGTCCAGCTCCTTCGAGGGTTAAGACTGAC +
Preference number: 2 (lower is better)
Translates to: YLIYFCHLQLLAFHE*LVSHGPAPSRVKTD
Trigger: GTCAGTCTTAACCCTCGAAGGAGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCAAAAATAAATTAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTGGCCTTTCATGAGTTaGTGGTCTCTCATGGTCCAG +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHWPFMS*WSLMVQ
Trigger: CTGGACCATGAGAGACCAGCAACTCATGAAAGGCCA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTTTATTTTTGCCATCTaGAGCTTCTGGCCTTTCATG +
Preference number: 2 (lower is better)
Translates to: SFLACLSYPQALASPTLFFIFAI*SFWPFM
Trigger: CATGAAAGGCCAGAAGCTGCAGATGGCAAAAATAAA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR TCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTCCAATGTGTTCTTTTaGCAGATATGGCGACTGTGT +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHSNVFF*QIWRLC
Trigger: ACACAGTCGCCATATCTGTCAAAAGAACACATTGGA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATCAGGAGGGACATTACTaGTTGGAGATGACATTTCAT +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHQEGHY*LEMTFH
Trigger: ATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTG...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATAACATCAAAAGTGGCTaGCTAAAATGGAGTCATTCT +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHNIKSG*LKWSHS
Trigger: AGAATGACTCCATTTTAGGCAGCCACTTTTGATGTT...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTACTTAATTTATTTTTaGCATCTGCAGCTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHYLIYF*HLQLLA
Trigger: GGCCAGAAGCTGCAGATGGCAAAAATAAATTAAGTA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GGGGGCTCTGTGGGGGTAAGAGGACAGTCCTCACCCTaGATACCTGGGACTCCCTTTGGCCCTCAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: GGSVGVRGQSSP*IPGTPFGPQAG
Trigger: CCCTGCCTGAGGGCCAAAGGGAGTCCCAGGTATCCAGGGTGAGGACTGTCCTCTTACCCCCACAGAGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AACATGCGCACCCTCCACCTGCCCAGAAGAGCCCTTTaGTCCCGACTCCTGAGGAGGCAGCTGACTGACAGG +
Preference number: 3 (lower is better)
Translates to: NMRTLHLPRRAL*SRLLRRQLTDR
Trigger: CCTGTCAGTCAGCTGCCTCCTCAGGAGTCGGGACCAAAGGGCTCTTCTGGGCAGGTGGAGGGTGCGCATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TGTGGGGGTAAGAGGACAGTCCTCACCCTGGATACCTaGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACA +
Preference number: 3 (lower is better)
Translates to: CGGKRTVLTLDT*DSLWPSGRAGT
Trigger: TGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAGGTATCCAGGGTGAGGACTGTCCTCTTACCCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GGATACCTGGGACTCCCTTTGGCCCTCAGGCAGGGCTaGGACAAGCCTATGACTCTGAGCCCCGGACACTTT +
Preference number: 3 (lower is better)
Translates to: GYLGLPLALRQG*DKPMTLSPGHF
Trigger: AAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAGGTATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GCAGACCAAAGAGGAGTGTGGGCCAGCCGGGCTAGGTaGGGCCACCACTGTTCCAGGAAGCACCTGAATACA +
Preference number: 3 (lower is better)
Translates to: ADQRGVWASRAR*GHHCSRKHLNT
Trigger: TGTATTCAGGTGCTTCCTGGAACAGTGGTGGCCCCACCTAGCCCGGCTGGCCCACACTCCTCTTTGGTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGCCCAGAAGAGCCCTTaGGTCCCGACTCCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: PLASSLQPDSGLWEMEACAQKSP*VPTPEE
Trigger: CTCCTCAGGAGTCGGGACCAAAGGGCTCTTCTGGGC...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp GTCCTCCAGTCTCCCGTGGTGGCTCTGGCCATCCAGTaGTGGTGGCTGACCGTGTACCTACCAAGAATGCTG +
Preference number: 3 (lower is better)
Translates to: VLQSPVVALAIQ*WWLTVYLPRML
Trigger: CAGCATTCTTGGTAGGTACACGGTCAGCCACCATCACTGGATGGCCAGAGCCACCACGGGAGACTGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp CTGGCAGAGCCACAAAGGCCCCTTGCTGTTAGCTGCTaGGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: LAEPQRPLAVSC*VVEADRKEPLG
Trigger: GCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGCAGCTAACAGCAAGGGGCCTTTGTGGCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp CACACCGCAGCTCTGCTCTGGGCACACTCATTCCCCTaGAGCTCAGAACCACTCACAGGCAGGAGAGTCTTC +
Preference number: 3 (lower is better)
Translates to: HTAALLWAHSFP*SSEPLTGRRVF
Trigger: GAAGACTCTCCTGCCTGTGAGTGGTTCTGAGCTGCAGGGGAATGAGTGTGCCCAGAGCAGAGCTGCGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp GACTCCTGCAGAGTAGTCCAGCACGGGACAAAGGTCTaGTCTGGAGGAAGAACAGGGCTACAGGCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: DSCRVVQHGTKV*SGGRTGLQARR
Trigger: CCTCCTGGCCTGTAGCCCTGTTCTTCCTCCAGAGCAGACCTTTGTCCCGTGCTGGACTACTCTGCAGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TCTCTGTGGACAGCCCTGGCTGAACTGAGGGTGTCGTaGAATGTTTCTGCTTCCCCCACCCTGATTGGGCCC +
Preference number: 3 (lower is better)
Translates to: SLWTALAELRVS*NVSASPTLIGP
Trigger: GGGCCCAATCAGGGTGGGGGAAGCAGAAACATTCCACGACACCCTCAGTTCAGCCAGGGCTGTCCACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GCAGGCTCAGAAATAAGGCTCACACTGAGATGGGGGTaGGGTGGAGATGACACGGCCCAGGTGTCAGTGGAC +
Preference number: 3 (lower is better)
Translates to: AGSEIRLTLRWG*GGDDTAQVSVD
Trigger: GTCCACTGACACCTGGGCCGTGTCATCTCCACCCCACCCCCATCTCAGTGTGAGCCTTATTTCTGAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CTAACAGTCCTCCACTTCCACACCGCAGCTCTGCTCTaGGCACACTCATTCCCCTGCAGCTCAGAACCACTC +
Preference number: 3 (lower is better)
Translates to: LTVLHFHTAALL*AHSFPCSSEPL
Trigger: GAGTGGTTCTGAGCTGCAGGGGAATGAGTGTGCCCAGAGCAGAGCTGCGGTGTGGAAGTGGAGGACTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AGCAGGTTGTTACAGCAATGGACGATCCTTAGGGCCTaGGGGCTCTGTGGGGGTAAGAGGACAGTCCTCACC +
Preference number: 3 (lower is better)
Translates to: SRLLQQWTILRA*GLCGGKRTVLT
Trigger: GGTGAGGACTGTCCTCTTACCCCCACAGAGCCCCCAGGCCCTAAGGATCGTCCATTGCTGTAACAACCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTaGGAAATGGAGGCTTGTGAGCTGCAGCTGAGGACA +
Preference number: 3 (lower is better)
Translates to: PLASSLQPDSGL*EMEACELQLRT
Trigger: TGTCCTCAGCTGCAGCTCACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AGCCACAAAGGCCCCTTGCTGTTAGCTGCTGAGTGGTaGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: SHKGPLLLAAEW*KPTGRNLLASQ
Trigger: CTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGCAGCTAACAGCAAGGGGCCTTTGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CAGAGCCACAAAGGCCCCTTGCTGTTAGCTGCTGAGTaGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: QSHKGPLLLAAE*WKPTGRNLLAS
Trigger: GGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGCAGCTAACAGCAAGGGGCCTTTGTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCGCTGGGAAAATTGGGTaGGCATCCCCGACTCCTGGG +
Preference number: 3 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSAGKIG*ASPTPG
Trigger: CCCAGGAGTCGGGGATGCCAACCCAATTTTCCCAGC...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCATTCCCCTGGCCAGATaGGGTGTCTGTCAGGTCATA +
Preference number: 3 (lower is better)
Translates to: DGMQALSPESAVSLGDSCIPLAR*GVCQVI
Trigger: TATGACCTGACAGACACCCAATCTGGCCAGGGGAAT...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp ACAGAGAGCCGGATGTGGCCAGCTGGACTTTTCAGATaGGGTGAGGTGGTTTCCTCCTACCCATCTGACCCC +
Preference number: 3 (lower is better)
Translates to: TESRMWPAGLFR*GEVVSSYPSDP
Trigger: GGGGTCAGATGGGTAGGAGGAAACCACCTCACCTCATCTGAAAAGTCCAGCTGGCCACATCCGGCTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp GCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTaGTACAGGAAGCAGGCTGTGAGAAGCCAAAGACCT +
Preference number: 3 (lower is better)
Translates to: ACWASHSLCTHI*YRKQAVRSQRP
Trigger: AGGTCTTTGGCTTCTCACAGCCTGCTTCCTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GGTGTCGTGGAATGTTTCTGCTTCCCCCACCCTGATTaGGCCCCTAGTCTCCAAGCAGACAGTACCCACAGA +
Preference number: 3 (lower is better)
Translates to: GVVECFCFPHPD*APSLQADSTHR
Trigger: TCTGTGGGTACTGTCTGCTTGGAGACTAGGGGCCCAATCAGGGTGGGGGAAGCAGAAACATTCCACGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTTaGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAA +
Preference number: 3 (lower is better)
Translates to: SSGFKPRPNLLL*SALCLSLCTSQ
Trigger: TTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTTCTGGCCACTGCAGTTaGGCTCTTCCCACGGCCAGG +
Preference number: 3 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLSGHCS*ALPTAR
Trigger: CCTGGCCGTGGGAAGAGCCAAACTGCAGTGGCCAGA...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACCAGGACATGGGCTGCTaGTGTCCCTTTCTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHQDMGC*CPFLCG
Trigger: TCCACAGAGAAAGGGACACAAGCAGCCCATGTCCTG...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTCGGGAAATCATAGGCTaGGTCTTCCTTCCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: PLASSLQPDSGLWEMEACREIIG*VFLPPQ
Trigger: TTGGGGAGGAAGGAAGACCAAGCCTATGATTTCCCG...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGCTGAGTTCCAGTTTTTaGAGGCTTTGTGACCAAGAG +
Preference number: 3 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQLSSSF*RLCDQE
Trigger: CTCTTGGTCACAAAGCCTCAAAAAACTGGAACTCAG...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp GGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATaGCATTTCATGACAGTGCTGGAAGGTGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: GLQARRDITGWR*HFMTVLEGAGP
Trigger: AGGGCCTGCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTaGAGAGTAGTCCAGCACGGGACAAAGGTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LSPESAVSLGDS*RVVQHGTKVCS
Trigger: AGAGCAGACCTTTGTCCCGTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTaGGGTCTGGCCACTGCAGTTTGGCTCTTCCCACGG +
Preference number: 3 (lower is better)
Translates to: KQVLSWGRSGWN*GLATAVWLFPR
Trigger: CCGTGGGAAGAGCCAAACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GTCAGGAGGGGTGAGGTATGCTGCATTGGTAGCTGTTaGCTTGTCTGTGGCTTCCCTGTGGGGTCTCAACAA +
Preference number: 3 (lower is better)
Translates to: VRRGEVCCIGSC*LVCGFPVGSQQ
Trigger: TTGTTGAGACCCCACAGGGAAGCCACAGACAAGCCAACAGCTACCAATGCAGCATACCTCACCCCTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TGTGGAAGAAGCAAACATAGGATTGTAGAGCCAGGCTaGGTGGGGACATGGAGAGGAGGGAGCTTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: CGRSKHRIVEPG*VGTWRGGSFLP
Trigger: AGGCAGGAAGCTCCCTCCTCTCCATGTCCCCACCCAGCCTGGCTCTACAATCCTATGTTTGCTTCTTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp ACAGGGCTCTTGGCTGTTTCGGGGGACTCACATCTGTaGCCAGCAGGCTTACTTGCCAGCTCCTTTTACCTT +
Preference number: 3 (lower is better)
Translates to: TGLLAVSGDSHL*PAGLLASSFYL
Trigger: AAGGTAAAAGGAGCTGGCAAGTAAGCCTGCTGGCCACAGATGTGAGTCCCCCGAAACAGCCAAGAGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCCCCCAACCTGCTCCTTaGGTCTGCTTTGTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPPQPAP*VCFVSQ
Trigger: CTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGG...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp GGTTGGCATCCCCGACTCCTGGGGCAGAGAGGCACCTaGTTACAGGTAGAATTCAAGTTCCCTACAGGTAAG +
Preference number: 3 (lower is better)
Translates to: GWHPRLLGQRGT*LQVEFKFPTGK
Trigger: CTTACCTGTAGGGAACTTGAATTCTACCTGTAATCAGGTGCCTCTCTGCCCCAGGAGTCGGGGATGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp CAGCTGGTGACCGGCAAAACTAGGAACCGAAGGCAGTaGGACTGTGATCTACTTCTTTCCTGCTCCGAGGAG +
Preference number: 3 (lower is better)
Translates to: QLVTGKTRNRRQ*DCDLLLSCSEE
Trigger: CTCCTCGGAGCAGGAAAGAAGTAGATCACAGTCTCACTGCCTTCGGTTCCTAGTTTTGCCGGTCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp ATGACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTaGCTCTCTGTCTGCACAGGAAGGTGGACAACAGTA +
Preference number: 3 (lower is better)
Translates to: MTVLEGAGPLRT*LSVCTGRWTTV
Trigger: TACTGTTGTCCACCTTCCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCAAGAAGTGGATGGAATaGGGGTCTGGCCACTGCAGT +
Preference number: 3 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPKKWME*GSGHCS
Trigger: ACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTT...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp GCCTATGACTCTGAGCCCCGGACACTTTGGTTCACATaGCATAGGAAGGGACCTGTTTACATCTGCCGGGAA +
Preference number: 3 (lower is better)
Translates to: AYDSEPRTLWFT*HRKGPVYICRE
Trigger: TTCCCGGCAGATGTAAACAGGTCCCTTCCTATGTCATGTGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp CACTTAAGAGTCCCAAACAATGGGGAGGCTGAGGCATaGCTGATGTCCCAGGAGTTTGTGACTAGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: HLRVPNNGEAEA*LMSQEFVTSLG
Trigger: TCCCAGGCTAGTCACAAACTCCTGGGACATCAGTCATGCCTCAGCCTCCCCATTGTTTGGGACTCTTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp TGGTTGGAGATGACATTTCATGACAGTGCTGGAAGGTaGAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: WLEMTFHDSAGR*RPFKDLPLCLH
Trigger: GTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATaGAATTGGGGTCTGGCCACTGCAGTTTGGCTCTTC +
Preference number: 3 (lower is better)
Translates to: LRKQVLSWGRSG*NWGLATAVWLF
Trigger: GAAGAGCCAAACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TCTGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTaGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTA +
Preference number: 3 (lower is better)
Translates to: SAPPNKPSAKNE*KSCGLHRSMSL
Trigger: TAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTGGGAGGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCGATGGGATGCAGGCCTaGTCACCAGAGTCAGCTGTG +
Preference number: 3 (lower is better)
Translates to: SFLACLSYPQALASPTLFDGMQA*SPESAV
Trigger: CACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp GAGGAAGTTTTGATTGGCCCAAGACCATACAGCTGGTaGCCGGCAAAACTAGGAACCGAAGGCAGTGAGACT +
Preference number: 3 (lower is better)
Translates to: EEVLIGPRPYSW*PAKLGTEGSET
Trigger: AGTCTCACTGCCTTCGGTTCCTAGTTTTGCCGGTCACCAGCTGTATGGTCTTGGGCCAATCAAAACTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp GAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTaGACAGGAAGGTGGACAACAGTAATTTGGATCTGT +
Preference number: 3 (lower is better)
Translates to: EGAGPLRTCLSV*TGRWTTVIWIC
Trigger: ACAGATCCAAATTACTGTTGTCCACCTTCCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TTTGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTaGTCTCTCATGGTCCAGCTCCTTCGAGGGTTAAGA +
Preference number: 3 (lower is better)
Translates to: FAICSFWPFMSC*SLMVQLLRGLR
Trigger: TCTTAACCCTCGAAGGAGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GTGTGGCTTAGACAATCCCTGAGCCTTGAAATGATCTaGACAGGACTGTTCCAGTCTATCCTGCCCACTGAG +
Preference number: 3 (lower is better)
Translates to: VWLRQSLSLEMI*TGLFQSILPTE
Trigger: CTCAGTGGGCAGGATAGACTGGAACAGTCCTGTCCAGATCATTTCAAGGCTCAGGGATTGTCTAAGCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp AGGAAGAACAGGGCTACAGGCCAGGAGGGACATTACTaGTTGGAGATGACATTTCATGACAGTGCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: RKNRATGQEGHY*LEMTFHDSAGR
Trigger: CCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp ATTTTTGCCATCTGCAGCTTCTGGCCTTTCATGAGTTaGTGGTCTCTCATGGTCCAGCTCCTTCGAGGGTTA +
Preference number: 3 (lower is better)
Translates to: IFAICSFWPFMS*WSLMVQLLRGL
Trigger: TAACCCTCGAAGGAGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTaGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCA +
Preference number: 3 (lower is better)
Translates to: QQTLCKERVEEL*AAPVNVFTSRA
Trigger: TGCTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CTCTCTGTCTGCACAGGAAGGTGGACAACAGTAATTTaGATCTGTGAAGAAGCTGAACACCATCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: LSVCTGRWTTVI*ICEEAEHHLGQ
Trigger: CTGCCCCAGATGGTGTTCAGCTTCTTCACAGATCCAAATTACTGTTGTCCACCTTCCTGTGCAGACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp AAACTCTTCACTCTCTCGTGTGACGCTCGTGCCTTATaGCTGGCAAACAGCAGATACTCACGTTATGGTTGT +
Preference number: 3 (lower is better)
Translates to: KLFTLSCDARAL*LANSRYSRYGC
Trigger: ACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAAGGCACGAGCGTCACACGAGAGAGTGAAGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp AACAGTAATGTTTATTACAGAGCAACATGGAGAACATaGATCCTAGCCCAGGGTCTAGGGCTGGCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: NSNVYYRATWRT*ILAQGLGLAEG
Trigger: CCCTTCTGCCAGCCCTAGACCCTGGGCTAGGATGCATGTTCTCCATGTTGCTCTGTAATAAACATTACTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp CAGACTCCTTCCTATCCTACATCTCTATCAAAAACTTaGGGTTGGGGCACATTTGTCCTAGCTGGGCAGTCA +
Preference number: 3 (lower is better)
Translates to: QTPSYPTSLSKT*GWGTFVLAGQS
Trigger: TGACTGCCCAGCTAGGACAAATGTGCCCCAACCCCAAGTTTTTGATAGAGATGTAGGATAGGAAGGAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp TGTCTGTCAGGTCATACAGCCTGTCTTTCACCTGTGTaGCTTAGACAATCCCTGAGCCTTGAAATGATCTGG +
Preference number: 3 (lower is better)
Translates to: CLSGHTACLSPV*LRQSLSLEMIW
Trigger: CCAGATCATTTCAAGGCTCAGGGATTGTCTAAGCCACACAGGTGAAAGACAGGCTGTATGACCTGACAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp AATTTATTTTTGCCATCTGCAGCTTCTGGCCTTTCATaGGTTGCTGGTCTCTCATGGTCCAGCTCCTTCGAG +
Preference number: 3 (lower is better)
Translates to: NLFLPSAASGLS*VAGLSWSSSFE
Trigger: CTCGAAGGAGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCAAAAATAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CCA 72 bp GGTGTCAGTGGACATTTTTACTGTGTTGTTTGTCTTTaGGTGCACATACACGCAGAGGGTAATCAGCATCAG +
Preference number: 3 (lower is better)
Translates to: GVSGHFYCVVCL*VHIHAEGNQHQ
Trigger: CTGATGCTGATTACCCTCTGCGTGTATGTGCACCCAAAGACAAACAACACAGTAAAAATGTCCACTGACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR TCA 72 bp TCTCTCAAAAACCCAGTGTTCACCAAATGGTTATCCTaGCTGGTAGGAACACCAGGAATGTCTGTATGTCTG +
Preference number: 3 (lower is better)
Translates to: SLKNPVFTKWLS*LVGTPGMSVCL
Trigger: CAGACATACAGACATTCCTGGTGTTCCTACCAGTCAGGATAACCATTTGGTGAACACTGGGTTTTTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR GCA 72 bp GGTCATAGTTTTCCGAACAGTTGTAGCGTGGGTAGCTaGATGTCCTTTGAAGTTTTCTATCCTTATCTAGGA +
Preference number: 3 (lower is better)
Translates to: GHSFPNSCSVGS*MSFEVFYPYLG
Trigger: TCCTAGATAAGGATAGAAAACTTCAAAGGACATGCAGCTACCCACGCTACAACTGTTCGGAAAACTATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR-3UTR CAA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTTACTTAATTTATTTTaGCCATCTGCAGCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHLLNLF*PSAASG
Trigger: GCCAGAAGCTGCAGATGGCAAAAATAAATTAAGTAA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGCCGCTCGGTGGAGGTTaGCAGGCACTTGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQPLGGG*QALVPQ
Trigger: CTGCGGCACAAGTGCCTGCCAACCTCCACCGAGCGG...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCGGCTGGAGGTGTCTCTaGATGGTGCTGAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSGWRCL*MVLRLR
Trigger: CCGCAGCCTCAGCACCATGCAGAGACACCTCCAGCC...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCCCCGGCTTGCAGGGGTaGATGCTGTGGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DGMQALSPESAVSLGDSCPGLQG*MLWGLE
Trigger: CTCCAGCCCCCACAGCATGCACCCCTGCAAGCCGGG...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCGGTGTGGGAGCTGTaGTGTTGGGCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSPVWEL*CWASEV
Trigger: CACCTCACTGGCCCAACACCACAGCTCCCACACCGG...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCGCTCCGACAGGTGCTTaGAGGGCTTCTGGCAAACGG +
Preference number: 4 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSAPTGA*RASGKR
Trigger: CCGTTTGCCAGAAGCCCTTCAAGCACCTGTCGGAGC...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGTGTGTGCGCTTGTGGTaGACGAGGTGCGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQCVRLW*TRCEDW
Trigger: CCAGTCCTCGCACCTCGTGCACCACAAGCGCACACA...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGGCCTCTCCGCACTGTaGGTGCGCTCATGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACGLSAL*VRSCCR
Trigger: GCGGCAGCATGAGCGCACGCACAGTGCGGAGAGGCC...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp ACCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGGTGATGGGGCGGTGGTaGTGGCCGGCTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TYQECCLLGFPLLVYPHLVMGRW*WPAPQP
Trigger: AGGCTGCGGAGCCGGCCACCACCACCGCCCCATCAC...CAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGCTGTGTGCACTGGAATaGGCGGTCGTGGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRLCALE*AVVACQ
Trigger: CTGGCAGGCCACGACCGCTCATTCCAGTGCACACAG...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GATGGGATGCAGGCCTTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCCCTGCCAGGCACTGGTaGTCATGCGGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: DGMQALSPESAVSLGDSCPARHW*SCGLDR
Trigger: CCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGG...GCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCAGGCTTCTGCTCGGCCTaGACACACTGGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LRQGWDKPMTLSPGHFGSGFCSA*THWCSS
Trigger: GCTGGAGCACCAGTGTGTGCAGGCCGAGCAGAAGCC...TGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCAGTGTGGATCCGCTCATaGCGGGAGAGCTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LRQGWDKPMTLSPGHFGSVWIRS*RESSDR
Trigger: CCTGTCGGAGCTCTCCCGGCATGAGCGGATCCACAC...TGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGTTGTGGTGCACGAGGTaGGAGGACTGGCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQLWCTR*EDWLKL
Trigger: GAGCTTCAGCCAGTCCTCGCACCTCGTGCACCACAA...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGTTAGGGCAAGCAGGCTaGCACCTGGTAGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRLGQAG*HLVGAL
Trigger: GAGGGCGCCTACCAGGTGGCAGCCTGCTTGCCCTAA...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp GAGGACAGTCCTCACCCTGGATACCTGGGACTCCCTTaGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACT +
Preference number: 4 (lower is better)
Translates to: EDSPHPGYLGLP*ALRQGWDKPMT
Trigger: AGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAGGTATCCAGGGTGAGGACTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGCAGACAAAAGGCTTCTaGTCGGCCTGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQQTKGF*SACTHW
Trigger: CCAGTGTGTGCAGGCCGAGCAGAAGCCTTTTGTCTG...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGGCTCCGAGCTGTGTGTaGGCTTGTGGTGCACGAGGT +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRAPSCV*ACGARG
Trigger: ACCTCGTGCACCACAAGCGCACACACAGCTCGGAGC...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGTTGGCAGGCACTTGTaGCGCAGCAGCTCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCVGRHL*RSSSAD
Trigger: GTCGGCCGAGCTGCTGCGGCACAAGTGCCTGCCAAC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTGCATGCTGTGGGGGCTaGAGGCCTGGGTCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: CHLQLLAFHELLVSHGPAACCGG*RPGSGC
Trigger: GCAACCCGACCCAGGCCTCCAGCCCCCACAGCATGC...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGTGTGCACCCGCCGGTaGCGTTGCAGGTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCVCTRR*RCRSEA
Trigger: TGCCTCAGACCTGCAACGCCACCGGCGGGTGCACAC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTAGGCCTGGGTCGGGTTaGAGGAGTATGCCGTACACG +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACRPGSG*RSMPYT
Trigger: CGTGTACGGCATACTCCTGCAACCCGACCCAGGCCT...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACTGCGTGCGCTCATGCTaGCGCAGGTCCGACGGCCGC +
Preference number: 4 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDCVRSC*RRSDGR
Trigger: GCGGCCGTCGGACCTGCGGCAGCATGAGCGCACGCA...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGCTACAGTCTCCGCACTGTGCGTaGGCTCATGCTGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QECCLLGFPLLVYPHLLQSPHCA*AHAAAG
Trigger: ACCTGCGGCAGCATGAGCGCACGCACAGTGCGGAGA...CTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTCTTCCGTCTTGTGTGTaGGCCGGTGGCGCATCAGTG +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACLPSCV*AGGASV
Trigger: CACTGATGCGCCACCGGCGCACACACAAGACGGAAG...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGGCATGCACGCCCTGGTaGTTGTTGAGATGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRACTPW*LLRCSR
Trigger: GCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGC...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp GACTGTGTCCCAAAGAGGTTAAGTGACCGGTCCAAGCTTACACAGCCAGAAGCCCGCCTGTGGCTGCTGTaGCTGAGTCTGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DCVPKRLSDRSKLTQPEARLWLL*LSLRWL
Trigger: CAGCCACCGCAGACTCAGCCACAGCAGCCACAGGCG...GGCTTCTGGCTGTGTAAGCTTGGACCGGTCACTTAACCTCTTTGGGACACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp ACCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGTGGGGGCTGGAGGCCTaGGTCGGGTTGCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: TYQECCLLGFPLLVYPHLWGLEA*VGLQEY
Trigger: ATACTCCTGCAACCCGACCCAGGCCTCCAGCCCCCA...CAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp AGGGGTGTAGCAGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGCAGGGGTGCATGCTGTaGGGGCTGGAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RGVAGSQKASPVMGKKWMQGCML*GLEAWV
Trigger: GACCCAGGCCTCCAGCCCCCACAGCATGCACCCCTG...CATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCTGCTACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCCACACACGCCACATTTaGGGCCCGGCTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPHTRHI*GPAPRL
Trigger: AAGCCGGGGAGCCGGGCCCCAAATGTGGCGTGTGTG...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTAGCAGCTCGGCCGACTaGTCGAAGCCCTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCSSSAD*SKPFWH
Trigger: GTGCCAGAAGGGCTTCGACCAGTCGGCCGAGCTGCT...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGCGGGCATGCACGCCCTaGTGCTTGTTGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRRACTP*CLLRCS
Trigger: AGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCG...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACGTCTCTGCATGGTGCTaGGGCTGCGGCGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDVSAWC*GCGACG
Trigger: GCCACAGGCGCCGCAGCCTCAGCACCATGCAGAGAC...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTCGCACCACACACACTTaGACTGCTGCTCTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACRTTHT*TAALGH
Trigger: ATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCG...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGCAGCTCGCACACGTTaGAGCGGAAGAGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACAARTR*SGRGDA
Trigger: AGCATCACCTCTTCCGCTGCAACGTGTGCGAGCTGC...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCCGGACACTTTGGTTCACGCATCAGTGCGTACTaGTGTTTGAAGCCCATGGGG +
Preference number: 4 (lower is better)
Translates to: LRQGWDKPMTLSPGHFGSRISAY*CLKPMG
Trigger: CCCCATGGGCTTCAAACAGCAGTACGCACTGATGCG...TGAACCAAAGTGTCCGGGGCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACACCCGCCGGTGGCGTTaGAGGTCTGAGGCATACTTG +
Preference number: 4 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHTRRWR*RSEAYL
Trigger: CAAGTATGCCTCAGACCTGCAACGCCACCGGCGGGT...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GCTGAGTGGTGGAAGCCGACAGGAAGGAACCTCTTGGCTTCCCAGGGGCCACAGTGGTGCTTGTTGAGATaGTCTCGCTGCTTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AEWWKPTGRNLLASQGPQWCLLR*SRCLKA
Trigger: AGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCA...CTGTGGCCCCTGGGAAGCCAAGAGGTTCCTTCCTGTCGGCTTCCACCACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTTCGGCCTGCACACACTaGTGCTCCAGCAGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: CHLQLLAFHELLVSHGPASACTH*CSSRSV
Trigger: CACCGACCTGCTGGAGCACCAGTGTGTGCAGGCCGA...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TCACAGGCAGGAGAGTCTTCCACAGACTCAGGACATGGGCTGCTTGTGTCCCTTTTGTGTGTGCGCCGGTaGCGCATCAGTGCGTACTGC +
Preference number: 4 (lower is better)
Translates to: SQAGESSTDSGHGLLVSLLCVRR*RISAYC
Trigger: GCAGTACGCACTGATGCGCCACCGGCGCACACACAA...AAGGGACACAAGCAGCCCATGTCCTGAGTCTGTGGAAGACTCTCCTGCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTGGTGCGAGGACTGGCTaGAGCTCTTGTCACACAGCG +
Preference number: 4 (lower is better)
Translates to: CHLQLLAFHELLVSHGPAGARTG*SSCHTA
Trigger: CGCTGTGTGACAAGAGCTTCAGCCAGTCCTCGCACC...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCTTGCAGCGGAAGAGGTaGTGCTCGCCAGAATGCGCG +
Preference number: 4 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSLQRKR*CSPECA
Trigger: CGCGCATTCTGGCGAGCATCACCTCTTCCGCTGCAA...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCGGTCCGACGGCCGCTTaGAGGCCTTCTGGCACTCGC +
Preference number: 4 (lower is better)
Translates to: SFLACLSYPQALASPTLFGPTAA*RPSGTR
Trigger: GCGAGTGCCAGAAGGCCTTCAAGCGGCCGTCGGACC...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACTACACACGGGGCACTTaGAGGGCCGCTCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDYTRGT*RAARWR
Trigger: CCTCCACCGAGCGGCCCTTCAAGTGCCCCGTGTGTA...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GACTGTGTCCCAAAGAGGTTAAGTGACCGGTCCAAGCTTACACAGCCAGAAGCCCGGGTTGCAGGAGTATaGCGTACACGGCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: DCVPKRLSDRSKLTQPEARVAGV*RTRHSP
Trigger: TGGGCTGTGCCGTGTACGGCATACTCCTGCAACCCG...GGCTTCTGGCTGTGTAAGCTTGGACCGGTCACTTAACCTCTTTGGGACACAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGCTACAGCCGGTGGCGCATCAGTaGGTACTGCTGTTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QECCLLGFPLLVYPHLLQPVAHQ*VLLFEA
Trigger: GGCTTCAAACAGCAGTACGCACTGATGCGCCACCGG...CTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp AGGGGTGTAGCAGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGCCGGGTCACAGCGGTaGTGCACGAACTCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: RGVAGSQKASPVMGKKWMAGSQR*CTNSEE
Trigger: TTCCTCGGAGTTCGTGCAGCACCGCTGTGACCCGGC...CATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCTGCTACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTCACACACACTTGAACTaGTGCTCTCGGGCATGCACG +
Preference number: 4 (lower is better)
Translates to: PLASSLQPDSGLWEMEACHTHLN*CSRACT
Trigger: CGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTG...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCCTGTGCTGGGCACTGTaGTCCTGTAGCAGCGCCACA +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPLCWAL*SCSSAT
Trigger: TGTGGCGCTGCTACAGGAGCACAGTGCCCAGCACAG...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp CATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTCTCCTGGGAGCTGTGGTGTTaGGCCAGTGAGGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HPSTPFYPVSKASSAPFSWELWC*ASEVSR
Trigger: CCTGCTCACCTCACTGGCCCAACACCACAGCTCCCA...GGAGAAGGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp CCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTaGTGTACCCACATCTGCTACAGGAAGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PTKNAACWASHS*CTHICYRKQAV
Trigger: CACAGCCTGCTTCCTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp AAGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTaGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCA +
Preference number: 4 (lower is better)
Translates to: KLRIQASPQPAP*VCFVSQPLHLP
Trigger: TGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTGAATCCTGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCCACAAATGGAGCACTTaGCCATGCCGGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPHKWST*PCRCGS
Trigger: GCTCCCACACCGGCATGGTCAAGTGCTCCATTTGTG...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTGCTCGGACGACTCTTTaGAATGCAGCTCGCACACGT +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCARTTL*NAARTR
Trigger: ACGTGTGCGAGCTGCATTTCAAAGAGTCGTCCGAGC...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCGGCACAGATCACACTTaGAGGGCCTCTCCGCACTGT +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPGTDHT*RASPHC
Trigger: ACAGTGCGGAGAGGCCCTTCAAGTGTGATCTGTGCC...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTCTTCTGCAGAGCGGATaGCCGCTTGTAGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCLLQSG*PLVGLV
Trigger: AACAAGGCCTACAAGCGGGCATCCGCTCTGCAGAAG...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTTGGAATGAGCGGTCGTaGCCTGCCAGGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLWNERS*PARHWC
Trigger: GCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCA...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp AGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTGGGGTCGGTAGAGCAGGTGGCTaGGCTGGCCGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RFSESKSCHGEEVDGIGVGRAGG*AGRSPS
Trigger: AGAAGGGCTTCGGCCAGCCCAGCCACCTGCTCTACC...GACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp AGGGGTGTAGCAGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGCGCAGTGGGACAGCTaGTGCTTCTGCAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: RGVAGSQKASPVMGKKWMAQWDS*CFCRAD
Trigger: ATCCGCTCTGCAGAAGCACCAGCTGTCCCACTGCGC...CATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCTGCTACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTCGGCGGCAGCGCAGTaGGACAGCTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SFLACLSYPQALASPTLFSAAAQ*DSWCFC
Trigger: GCAGAAGCACCAGCTGTCCCACTGCGCTGCCGCCGA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTAGCAGGTCGGTGGCCTaGTGGAAGATCTTAAGACAC +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCSRSVA*WKILRH
Trigger: GTGTCTTAAGATCTTCCATCAGGCCACCGACCTGCT...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACAGGCACTGGTGCTCATaGGGACTGGACAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDRHWCS*GLDRCA
Trigger: GGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCT...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGGGGAGAAGCCCATTTTaGAAACACCGCAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRGRSPF*KHRRQK
Trigger: CTTTTGTCTGCGGTGTTTGCAAAATGGGCTTCTCCC...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCGAGAGCTCCGACAGGTaGTTGAAGGGCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPESSDR*LKGFWQ
Trigger: TTGCCAGAAGCCCTTCAAGCACCTGTCGGAGCTCTC...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TGCTCCCTTCTCCCCAGTCTTCCCAAAGACCACAAGTACAGGGCTCTTGGCTGTACCAGATGCGAGCGGTaGTTAAAGGTCTTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: CSLLPSLPKDHKYRALGCTRCER*LKVFSQ
Trigger: CTGCGAGAAGACCTTTAAGCACCGCTCGCATCTGGT...ACAGCCAAGAGCCCTGTACTTGTGGTCTTTGGGAAGACTGGGGAGAAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp AGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTGGGGTCCAGTGGGACAGCTGGTaGTTCTGCAGAGCGGATGCC +
Preference number: 4 (lower is better)
Translates to: RFSESKSCHGEEVDGIGVQWDSW*FCRADA
Trigger: GGCATCCGCTCTGCAGAAGCACCAGCTGTCCCACTG...GACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp AGGGGTGTAGCAGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGACACACTTGAACTGCTaGTCTCGGGCATGCACGCCC +
Preference number: 4 (lower is better)
Translates to: RGVAGSQKASPVMGKKWMTHLNC*SRACTP
Trigger: GGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGT...CATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCTGCTACACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTGGCCTGCCAGGCACTaGTGCTCATGCGGACTGGAC +
Preference number: 4 (lower is better)
Translates to: SFLACLSYPQALASPTLFWPARH*CSCGLD
Trigger: GTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACCTCCGCAGCCTCAGCTaGCTTGTAGGTCTTATCACA +
Preference number: 4 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHLRSLS*LVGLIT
Trigger: TGTGATAAGACCTACAAGCCAGCTGAGGCTGCGGAG...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTGAATGCGCGTACATGTaGCGCACCAGATGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLECAYM*RTRCER
Trigger: CCGCTCGCATCTGGTGCGCCACATGTACGCGCATTC...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp AAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATaGGGGTCTGGCCACTGCAGTTTGGCTCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: KASPVMGKKWME*GSGHCSLALPT
Trigger: CGTGGGAAGAGCCAAACTGCAGTGGCCAGACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp GGAGGGGTGAGGTATGCTGCATTGGTAGCTGTTGGCTaGTCTGTGGCTTCCCTGTGGGGTCTCAACAATGAT +
Preference number: 4 (lower is better)
Translates to: GGVRYAALVAVG*SVASLWGLNND
Trigger: ATCATTGTTGAGACCCCACAGGGAAGCCACAGACAAGCCAACAGCTACCAATGCAGCATACCTCACCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTCGGACTGGACAGGTGTaGCAGATCATGGCCACACAC +
Preference number: 4 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLRTGQV*QIMATH
Trigger: GTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCG...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp ACCTACCAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGGACGACTCTTTGAAATaGAGCTCGCACACGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TYQECCLLGFPLLVYPHLDDSLK*SSHTLQ
Trigger: CTGCAACGTGTGCGAGCTGCATTTCAAAGAGTCGTC...CAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTGGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTGCTGCTCTCGGGCATaGACGCCCTGGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SFLACLSYPQALASPTLFCCSRA*TPWCLL
Trigger: CAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCAGGTGTGCCAGATCATaGCCACACACGCCACATTTG +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPRCARS*PHTPHL
Trigger: CAAATGTGGCGTGTGTGGCCATGATCTGGCACACCT...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp GGACAAAAACGCTTTGTTAAGGATGGGATGCAGGCCTaGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GQKRFVKDGMQA*SPESAVSLGDS
Trigger: GGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAAGGCCTGCATCCCATCCTTAACAAAGCGTTTTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp AACAGGGCTACAGGCCAGGAGGGACATTACTGGTTGGAGATGACATTTCATGACGTGCGTACTGCTGTTTaGAGCCCATGGGGCACAGAT +
Preference number: 4 (lower is better)
Translates to: NRATGQEGHYWLEMTFHDVRTAV*SPWGTD
Trigger: ATCTGTGCCCCATGGGCTTCAAACAGCAGTACGCAC...GTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCGGTCTGAGGCATACTTaGAGCGCTTCTCGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: SFLACLSYPQALASPTLFGLRHT*SASRSP
Trigger: CGGACTGCGAGAAGCGCTTCAAGTATGCCTCAGACC...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp AGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTGGGGTCGGTGCTCATGCGGACTaGACAGGTGTGCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: RFSESKSCHGEEVDGIGVGAHAD*TGVPDH
Trigger: ATGATCTGGCACACCTGTCCAGTCCGCATGAGCACC...GACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR TCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATGTGGTGTTGGGCCAGTaGGGTGAGCAGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHVVLGQ*GEQGEA
Trigger: GGCTTCTCCCTGCTCACCTCACTGGCCCAACACCAC...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp CAAAGCCATCCTTCCACCCCTTTCTACCCAGTCTCAAAAGCCTCAAGTGCTCCCTTGAGATGCTCTCGCTaGTTGAAGGCTTTATCGCAG +
Preference number: 4 (lower is better)
Translates to: QSHPSTPFYPVSKASSAPLRCSR*LKALSQ
Trigger: CTGCGATAAAGCCTTCAAGCAGCGAGAGCATCTCAA...GGGAGCACTTGAGGCTTTTGAGACTGGGTAGAAAGGGGTGGAAGGATGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp AAGAACAGGGCTACAGGCCAGGAGGGACATTACTGGTaGGAGATGACATTTCATGACAGTGCTGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: KNRATGQEGHYW*EMTFHDSAGRC
Trigger: GCACCTTCCAGCACTGTCATGAAATGTCATCTCCAACCAGTAATGTCCCTCCTGGCCTGTAGCCCTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp TATTTTTGCCATCTGCAGCTTCTGGCCTTTCATGAGTaGCTGGTCTCTCATGGTCCAGCTCCTTCGAGGGTT +
Preference number: 4 (lower is better)
Translates to: YFCHLQLLAFHE*LVSHGPAPSRV
Trigger: AACCCTCGAAGGAGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp GACACGGCCCAGGTGTCAGTGGACATTTTTACTGTGTaGTTTGTCTTTGGGTGCACATACACGCAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: DTAQVSVDIFTV*FVFGCTYTQRV
Trigger: TACCCTCTGCGTGTATGTGCACCCAAAGACAAACAACACAGTAAAAATGTCCACTGACACCTGGGCCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp CATCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTaGCCTCCCCAACTTTGTTCAAAGCCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HLFLLVYPTLRL*PPQLCSKPSFH
Trigger: GTGGAAGGATGGCTTTGAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
3UTR CAA 72 bp GTAAATGGACTTGGGGATAAAGAAATGGCTCTGAGGTaGAGTGCTGGCTGCTTTTCCAGAGAACCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VNGLGDKEMALR*SAGCFSREPRF
Trigger: GAACCTGGGTTCTCTGGAAAAGCAGCCAGCACTCAACCTCAGAGCCATTTCTTTATCCCCAAGTCCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATATGTGGCGCACCAGATaGGAGCGGTGCTTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHMWRTR*ERCLKV
Trigger: GACCTTTAAGCACCGCTCGCATCTGGTGCGCCACAT...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATAGACACTGTGTGCACTaGAATGAGCGGTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHRHCVH*NERSWP
Trigger: AGGCCACGACCGCTCATTCCAGTGCACACAGTGTCT...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR GCA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATTCTTGTCACACAGCGTaGACTTATACGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHSCHTA*TYTASL
Trigger: GAGAGAAGCCGTATAAGTGCACGCTGTGTGACAAGA...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp GAGTATGCCGTACACGGCACAGCCCAGGGGGTTCTCGGCCGAGCCTaGGGGCAGCGTGTGCTCAGCCAGGGCTGGAGGTGTCTCTGCATG +
Preference number: 5 (lower is better)
Translates to: EYAVHGTAQGVLGRA*GQRVLSQGWRCLCM
Trigger: CATGCAGAGACACCTCCAGCCCTGGCTGAGCACACGCTGCCCCCAGGCTCGGCCGAGAACCCCCTGGGCTGTGCCGTGTACGGCATACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp GTCGTGGCCTGCCAGGCACTGGTGCTCATGCGGACTGGACAGGTGTaGCAGATCATGGCCACACACGCCACATTTGGGGCCCGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VVACQALVLMRTGQV*QIMATHATFGARLP
Trigger: GGGGAGCCGGGCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp GCCAGGCACTGGTGCTCATGCGGACTGGACAGGTGTGCCAGATCATaGCCACACACGCCACATTTGGGGCCCGGCTCCCCGGCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ARHWCSCGLDRCARS*PHTPHLGPGSPACR
Trigger: CCTGCAAGCCGGGGAGCCGGGCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCCCACACACGCCACATTaGGGGCCCGGCTCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSPHTPH*GPGSPA
Trigger: AGCCGGGGAGCCGGGCCCCAAATGTGGCGTGTGTGG...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 90 bp CGCCGCTCGGGGTACAGGGGTGCTGCAGCAGCTCGGACGACTCTTTaGAATGCAGCTCGCACACGTTGCAGCGGAAGAGGTGATGCTCGC +
Preference number: 5 (lower is better)
Translates to: RRSGYRGAAAARTTL*NAARTRCSGRGDAR
Trigger: GCGAGCATCACCTCTTCCGCTGCAACGTGTGCGAGCTGCATTTCAAAGAGTCGTCCGAGCTGCTGCAGCACCCCTGTACCCCGAGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp GGAATGAGCGGTCGTGGCCTGCCAGGCACTGGTGCTCATGCGGACTaGACAGGTGTGCCAGATCATGGCCACACACGCCACATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GMSGRGLPGTGAHAD*TGVPDHGHTRHIWG
Trigger: GCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp GTGCACTGGAATGAGCGGTCGTGGCCTGCCAGGCACTGGTGCTCATaGGGACTGGACAGGTGTGCCAGATCATGGCCACACACGCCACAT +
Preference number: 5 (lower is better)
Translates to: VHWNERSWPARHWCS*GLDRCARSWPHTPH
Trigger: ATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp CACTGTGTGCACTGGAATGAGCGGTCGTGGCCTGCCAGGCACTGGTaGTCATGCGGACTGGACAGGTGTGCCAGATCATGGCCACACACG +
Preference number: 5 (lower is better)
Translates to: HCVHWNERSWPARHW*SCGLDRCARSWPHT
Trigger: CGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCACACAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTTCGCAGTCCGGACACTaGAGCGGCTTCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PLASSLQPDSGLWEMEACSQSGH*SGFSRA
Trigger: GGCCCGGGAGAAGCCGCTCAAGTGTCCGGACTGCGA...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp AGACACTGTGTGCACTGGAATGAGCGGTCGTGGCCTGCCAGGCACTaGTGCTCATGCGGACTGGACAGGTGTGCCAGATCATGGCCACAC +
Preference number: 5 (lower is better)
Translates to: RHCVHWNERSWPARH*CSCGLDRCARSWPH
Trigger: GTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCACACAGTGTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TTGTCACCAGAGTCAGCTGTGAGTTTGGGGGACTCCTGCAGAGTAGTCCAGCACGCCGCTCGGTGGAGGTaGGCAGGCACTTGTGCCGCA +
Preference number: 5 (lower is better)
Translates to: LSPESAVSLGDSCRVVQHAARWR*AGTCAA
Trigger: TGCGGCACAAGTGCCTGCCAACCTCCACCGAGCGGC...GTGCTGGACTACTCTGCAGGAGTCCCCCAAACTCACAGCTGACTCTGGTGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp GCCACATCCAGAAAGCGTTCGCCGCACCACACACACTTGAACTGCTaGTCTCGGGCATGCACGCCCTGGTGCTTGTTGAGATGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: ATSRKRSPHHTHLNC*SRACTPWCLLRCSR
Trigger: GCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGGCGAACGCTTTCTGGATGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp AGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAATTGGGGTCGCCCGGCTCCCCGGCTaGCAGGGGTGCATGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RFSESKSCHGEEVDGIGVARLPG*QGCMLW
Trigger: CCACAGCATGCACCCCTGCAAGCCGGGGAGCCGGGC...GACCCCAATTCCATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp CCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTAAGGGTTCTTCCGTCTaGTGTGTGCGCCGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: PLASSLQPDSGLWEMEACKGSSV*CVRRWR
Trigger: GCGCCACCGGCGCACACACAAGACGGAAGAACCCTT...ACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TGCCATCTGCAGCTTCTGGCCTTTCATGAGTTGCTGGTCTCTCATGGTCCAGCTGAGGTTGGCAGGCACTaGTGCCGCAGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CHLQLLAFHELLVSHGPAEVGRH*CRSSSA
Trigger: GGCCGAGCTGCTGCGGCACAAGTGCCTGCCAACCTC...AGCTGGACCATGAGAGACCAGCAACTCATGAAAGGCCAGAAGCTGCAGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 90 bp GTCGGTGGCCTGATGGAAGATCTTAAGACACTGTGTGCACTGGAATaGGCGGTCGTGGCCTGCCAGGCACTGGTGCTCATGCGGACTGGA +
Preference number: 5 (lower is better)
Translates to: VGGLMEDLKTLCALE*AVVACQALVLMRTG
Trigger: TCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCACACAGTGTCTTAAGATCTTCCATCAGGCCACCGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp GGTTCTTCCGTCTTGTGTGTGCGCCGGTGGCGCATCAGTGCGTACTaGTGTTTGAAGCCCATGGGGCACAGATCACACTTGAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSSVLCVRRWRISAY*CLKPMGHRSHLKGL
Trigger: GAGGCCCTTCAAGTGTGATCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp AAGCGTTCGCCGCACCACACACACTTGAACTGCTGCTCTCGGGCATaGACGCCCTGGTGCTTGTTGAGATGCTCTCGCTGCTTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KRSPHHTHLNCCSRA*TPWCLLRCSRCLKA
Trigger: AGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGGCGAACGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp AGCGCCACATCCAGAAAGCGTTCGCCGCACCACACACACTTGAACTaGTGCTCTCGGGCATGCACGCCCTGGTGCTTGTTGAGATGCTCT +
Preference number: 5 (lower is better)
Translates to: SATSRKRSPHHTHLN*CSRACTPWCLLRCS
Trigger: AGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGGCGAACGCTTTCTGGATGTGGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp CACAGGCCGCACTTAAAGGGTTCTTCCGTCTTGTGTGTGCGCCGGTaGCGCATCAGTGCGTACTGCTGTTTGAAGCCCATGGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: HRPHLKGSSVLCVRR*RISAYCCLKPMGHR
Trigger: TCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAACCCTTTAAGTGCGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp CTGGGACTCCCTTTGGCCCTCAGGCAGGGCTGGGACAAGCCTATGACTCTGAGCGACTGGCTGAAGCTCTaGTCACACAGCGTGCACTTA +
Preference number: 5 (lower is better)
Translates to: LGLPLALRQGWDKPMTLSDWLKL*SHSVHL
Trigger: TAAGTGCACGCTGTGTGACAAGAGCTTCAGCCAGTC...GCTCAGAGTCATAGGCTTGTCCCAGCCCTGCCTGAGGGCCAAAGGGAGTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 90 bp GGAGCACTTGACCATGCCGGTGTGGGAGCTGTGGTGTTGGGCCAGTaGGGTGAGCAGGGAGAAGCCCATTTTGCAAACACCGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: GALDHAGVGAVVLGQ*GEQGEAHFANTADK
Trigger: TTTGTCTGCGGTGTTTGCAAAATGGGCTTCTCCCTGCTCACCTCACTGGCCCAACACCACAGCTCCCACACCGGCATGGTCAAGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 90 bp GACGACTCTTTGAAATGCAGCTCGCACACGTTGCAGCGGAAGAGGTaGTGCTCGCCAGAATGCGCGTACATGTGGCGCACCAGATGCGAG +
Preference number: 5 (lower is better)
Translates to: DDSLKCSSHTLQRKR*CSPECAYMWRTRCE
Trigger: CTCGCATCTGGTGCGCCACATGTACGCGCATTCTGGCGAGCATCACCTCTTCCGCTGCAACGTGTGCGAGCTGCATTTCAAAGAGTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp CCGCACCACACACACTTGAACTGCTGCTCTCGGGCATGCACGCCCTaGTGCTTGTTGAGATGCTCTCGCTGCTTGAAGGCTTTATCGCAG +
Preference number: 5 (lower is better)
Translates to: PHHTHLNCCSRACTP*CLLRCSRCLKALSQ
Trigger: CTGCGATAAAGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp GACAGTGCTGGAAGGTGCAGGCCCTTTAAGGACCTGCCTCTCTGTCTGCACAGGAGGTCTGAGGCATACTaGAAGCGCTTCTCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: DSAGRCRPFKDLPLCLHRRSEAY*KRFSQS
Trigger: GGACTGCGAGAAGCGCTTCAAGTATGCCTCAGACCT...CCTGTGCAGACAGAGAGGCAGGTCCTTAAAGGGCCTGCACCTTCCAGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 90 bp TCACAAATGGAGCACTTGACCATGCCGGTGTGGGAGCTGTGGTGTTaGGCCAGTGAGGTGAGCAGGGAGAAGCCCATTTTGCAAACACCG +
Preference number: 5 (lower is better)
Translates to: SQMEHLTMPVWELWC*ASEVSREKPILQTP
Trigger: CGGTGTTTGCAAAATGGGCTTCTCCCTGCTCACCTCACTGGCCCAACACCACAGCTCCCACACCGGCATGGTCAAGTGCTCCATTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp CAAGAATGCTGCCTGCTGGGCTTCCCACTCCTTGTGTACCCACATCTGCTACAGAGCTCCGACAGGTGCTaGAAGGGCTTCTGGCAAACG +
Preference number: 5 (lower is better)
Translates to: QECCLLGFPLLVYPHLLQSSDRC*KGFWQT
Trigger: CGTTTGCCAGAAGCCCTTCAAGCACCTGTCGGAGCT...CTGTAGCAGATGTGGGTACACAAGGAGTGGGAAGCCCAGCAGGCAGCATTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp AGGGGTGTAGCAGGTTCTCAGAAAGCAAGTCCTGTCATGGGGAAGAAGTGGATGGAGCTGTGTGTGCGCTaGTGGTGCACGAGGTGCGAG +
Preference number: 5 (lower is better)
Translates to: RGVAGSQKASPVMGKKWMELCVR*WCTRCE
Trigger: CTCGCACCTCGTGCACCACAAGCGCACACACAGCTC...CATCCACTTCTTCCCCATGACAGGACTTGCTTTCTGAGAACCTGCTACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp CACCACACACACTTGAACTGCTGCTCTCGGGCATGCACGCCCTGGTaGTTGTTGAGATGCTCTCGCTGCTTGAAGGCTTTATCGCAGCTA +
Preference number: 5 (lower is better)
Translates to: HHTHLNCCSRACTPW*LLRCSRCLKALSQL
Trigger: TAGCTGCGATAAAGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCAGGTCCGACGGCCGCTaGAAGGCCTTCTGGCACTCG +
Preference number: 5 (lower is better)
Translates to: SFLACLSYPQALASPTLFRSDGR*KAFWHS
Trigger: CGAGTGCCAGAAGGCCTTCAAGCGGCCGTCGGACCT...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 90 bp CTTAAAGGGTTCTTCCGTCTTGTGTGTGCGCCGGTGGCGCATCAGTaGGTACTGCTGTTTGAAGCCCATGGGGCACAGATCACACTTGAA +
Preference number: 5 (lower is better)
Translates to: LKGFFRLVCAPVAHQ*VLLFEAHGAQITLE
Trigger: TTCAAGTGTGATCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAACCCTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTGGGCACAGATCACACTaGAAGGGCCTCTCCGCACTG +
Preference number: 5 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLGHRSH*KGLSAL
Trigger: CAGTGCGGAGAGGCCCTTCAAGTGTGATCTGTGCCC...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TCTTTTCTTGCTTGTCTATCCTACCCTCAGGCTCTTGCCTCCCCAACTTTGTTCTGCACGCCCTGGTGCTaGTTGAGATGCTCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: SFLACLSYPQALASPTLFCTPWC*LRCSRC
Trigger: GCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCA...GAACAAAGTTGGGGAGGCAAGAGCCTGAGGGTAGGATAGACAAGCAAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TTTGGACTTGAACACATGCAGTTCCCTGGCCTTTACCACAGACCCCACCATCTTAGTGCGTACTGCTGTTaGAAGCCCATGGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: FGLEHMQFPGLYHRPHHLSAYCC*KPMGHR
Trigger: TCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACT...AAGATGGTGGGGTCTGTGGTAAAGGCCAGGGAACTGCATGTGTTCAAGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS-3UTR CAA 90 bp TTATGCCTGGCAAACAGCAGATACTCACGTTATGGTTGTGGAAGAAGCAAACATCCGCACCACACACACTaGAACTGCTGCTCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: LCLANSRYSRYGCGRSKHPHHTH*NCCSRA
Trigger: TGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGG...ATGTTTGCTTCTTCCACAACCATAACGTGAGTATCTGCTGTTTGCCAGGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp AGGGTGCACCGCAGAGGCTTCTCGGCGGCAGCGCAGTaGGACAGCTGGTGCTTCTGCAGAGCGGATGCCCGC +
Preference number: 6 (lower is better)
Translates to: RVHRRGFSAAAQ*DSWCFCRADAR
Trigger: GCGGGCATCCGCTCTGCAGAAGCACCAGCTGTCCCACTGCGCTGCCGCCGAGAAGCCTCTGCGGTGCACCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp CGGAAGGGCCGCTCGCCGCTCGGGGTACAGGGGTGCTaGAGCAGCTCGGACGACTCTTTGAAATGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: RKGRSPLGVQGC*SSSDDSLKCSS
Trigger: CGAGCTGCATTTCAAAGAGTCGTCCGAGCTGCTGCAGCACCCCTGTACCCCGAGCGGCGAGCGGCCCTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp CAGCGGAAGGGCCGCTCGCCGCTCGGGGTACAGGGGTaGTGCAGCAGCTCGGACGACTCTTTGAAATGCAGC +
Preference number: 6 (lower is better)
Translates to: QRKGRSPLGVQG*CSSSDDSLKCS
Trigger: GCTGCATTTCAAAGAGTCGTCCGAGCTGCTGCAGCACCCCTGTACCCCGAGCGGCGAGCGGCCCTTCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp TTGAAGGGCCGCTCGGTGGAGGTTGGCAGGCACTTGTaGCGCAGCAGCTCGGCCGACTGGTCGAAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LKGRSVEVGRHL*RSSSADWSKPF
Trigger: GAAGGGCTTCGACCAGTCGGCCGAGCTGCTGCGGCACAAGTGCCTGCCAACCTCCACCGAGCGGCCCTTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp GGCTTGCAGGGGTGCATGCTGTGGGGGCTGGAGGCCTaGGTCGGGTTGCAGGAGTATGCCGTACACGGCACA +
Preference number: 6 (lower is better)
Translates to: GLQGCMLWGLEA*VGLQEYAVHGT
Trigger: TGTGCCGTGTACGGCATACTCCTGCAACCCGACCCAGGCCTCCAGCCCCCACAGCATGCACCCCTGCAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp ACAGGTGTGCCAGATCATGGCCACACACGCCACATTTaGGGCCCGGCTCCCCGGCTTGCAGGGGTGCATGCT +
Preference number: 6 (lower is better)
Translates to: TGVPDHGHTRHI*GPAPRLAGVHA
Trigger: AGCATGCACCCCTGCAAGCCGGGGAGCCGGGCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp TGGTGCTCATGCGGACTGGACAGGTGTGCCAGATCATaGCCACACACGCCACATTTGGGGCCCGGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: WCSCGLDRCARS*PHTPHLGPGSP
Trigger: CGGGGAGCCGGGCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp GGATCCGCTCATGCCGGGAGAGCTCCGACAGGTGCTTaGAGGGCTTCTGGCAAACGGGGCAGCTATAGGGCT +
Preference number: 6 (lower is better)
Translates to: GSAHAGRAPTGA*RASGKRGSYRA
Trigger: AGCCCTATAGCTGCCCCGTTTGCCAGAAGCCCTTCAAGCACCTGTCGGAGCTCTCCCGGCATGAGCGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp TGCCAGGCACTGGTGCTCATGCGGACTGGACAGGTGTaGCAGATCATGGCCACACACGCCACATTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: CQALVLMRTGQV*QIMATHATFGA
Trigger: GGCCCCAAATGTGGCGTGTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp AATGAGCGGTCGTGGCCTGCCAGGCACTGGTGCTCATaGGGACTGGACAGGTGTGCCAGATCATGGCCACAC +
Preference number: 6 (lower is better)
Translates to: NERSWPARHWCS*GLDRCARSWPH
Trigger: GTGTGGCCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp CACTGGAATGAGCGGTCGTGGCCTGCCAGGCACTGGTaGTCATGCGGACTGGACAGGTGTGCCAGATCATGG +
Preference number: 6 (lower is better)
Translates to: HWNERSWPARHW*SCGLDRCARSW
Trigger: CCATGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp GTGCACTGGAATGAGCGGTCGTGGCCTGCCAGGCACTaGTGCTCATGCGGACTGGACAGGTGTGCCAGATCA +
Preference number: 6 (lower is better)
Translates to: VHWNERSWPARH*CSCGLDRCARS
Trigger: TGATCTGGCACACCTGTCCAGTCCGCATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp AGCGCAGTGGGACAGCTGGTGCTTCTGCAGAGCGGATaGCCGCTTGTAGGCCTTGTTACACACGGGGCACTT +
Preference number: 6 (lower is better)
Translates to: SAVGQLVLLQSG*PLVGLVTHGAL
Trigger: AAGTGCCCCGTGTGTAACAAGGCCTACAAGCGGGCATCCGCTCTGCAGAAGCACCAGCTGTCCCACTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp CCGCACCACACACACTTGAACTGCTGCTCTCGGGCATaGACGCCCTGGTGCTTGTTGAGATGCTCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: PHHTHLNCCSRA*TPWCLLRCSRC
Trigger: GCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 72 bp GGGGTACAGGGGTGCTGCAGCAGCTCGGACGACTCTTaGAAATGCAGCTCGCACACGTTGCAGCGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: GVQGCCSSSDDS*KCSSHTLQRKR
Trigger: CCTCTTCCGCTGCAACGTGTGCGAGCTGCATTTCAAAGAGTCGTCCGAGCTGCTGCAGCACCCCTGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp GGGTACAGGGGTGCTGCAGCAGCTCGGACGACTCTTTaGAATGCAGCTCGCACACGTTGCAGCGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: GYRGAAAARTTL*NAARTRCSGRG
Trigger: ACCTCTTCCGCTGCAACGTGTGCGAGCTGCATTTCAAAGAGTCGTCCGAGCTGCTGCAGCACCCCTGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp TGCTCGCCAGAATGCGCGTACATGTGGCGCACCAGATaGGAGCGGTGCTTAAAGGTCTTCTCGCAGACAGCG +
Preference number: 6 (lower is better)
Translates to: CSPECAYMWRTR*ERCLKVFSQTA
Trigger: CGCTGTCTGCGAGAAGACCTTTAAGCACCGCTCGCATCTGGTGCGCCACATGTACGCGCATTCTGGCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp TCCAGAAAGCGTTCGCCGCACCACACACACTTGAACTaGTGCTCTCGGGCATGCACGCCCTGGTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SRKRSPHHTHLN*CSRACTPWCLL
Trigger: CAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGGCGAACGCTTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 72 bp TGTGTGCGCCGGTGGCGCATCAGTGCGTACTGCTGTTaGAAGCCCATGGGGCACAGATCACACTTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: CVRRWRISAYCC*KPMGHRSHLKG
Trigger: GCCCTTCAAGTGTGATCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 90 bp CCGAAGCCCTTCTCGCACAGGCCGCACTTAAAGGGTTCTTCCGTCTaGTGTGTGCGCCGGTGGCGCATCAGTGCGTACTGCTGTTTGAAG +
Preference number: 6 (lower is better)
Translates to: PKPFSHRPHLKGSSV*CVRRWRISAYCCLK
Trigger: CTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAACCCTTTAAGTGCGGCCTGTGCGAGAAGGGCTTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp GTGTGCGCTTGTGGTGCACGAGGTGCGAGGACTGGCTaGAGCTCTTGTCACACAGCGTGCACTTATACGGCT +
Preference number: 6 (lower is better)
Translates to: VCACGARGARTG*SSCHTACTYTA
Trigger: AGCCGTATAAGTGCACGCTGTGTGACAAGAGCTTCAGCCAGTCCTCGCACCTCGTGCACCACAAGCGCACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp TTGAAATGCAGCTCGCACACGTTGCAGCGGAAGAGGTaGTGCTCGCCAGAATGCGCGTACATGTGGCGCACC +
Preference number: 6 (lower is better)
Translates to: LKCSSHTLQRKR*CSPECAYMWRT
Trigger: GGTGCGCCACATGTACGCGCATTCTGGCGAGCATCACCTCTTCCGCTGCAACGTGTGCGAGCTGCATTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp TTCTTCCGTCTTGTGTGTGCGCCGGTGGCGCATCAGTaGGTACTGCTGTTTGAAGCCCATGGGGCACAGATC +
Preference number: 6 (lower is better)
Translates to: FFRLVCAPVAHQ*VLLFEAHGAQI
Trigger: GATCTGTGCCCCATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS GCA 72 bp AGAAAGCGTTCGCCGCACCACACACACTTGAACTGCTaGTCTCGGGCATGCACGCCCTGGTGCTTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: RKRSPHHTHLNC*SRACTPWCLLR
Trigger: TCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGTGTGGTGCGGCGAACGCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 90 bp ACACACTTGAACTGCTGCTCTCGGGCATGCACGCCCTGGTGCTTGTaGAGATGCTCTCGCTGCTTGAAGGCTTTATCGCAGCTAGGGCAC +
Preference number: 6 (lower is better)
Translates to: THLNCCSRACTPWCL*RCSRCLKALSQLGH
Trigger: GTGCCCTAGCTGCGATAAAGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp GTCTTATCACAAATGGAGCACTTGACCATGCCGGTGTaGGAGCTGTGGTGTTGGGCCAGTGAGGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: VLSQMEHLTMPV*ELWCWASEVSR
Trigger: CCTGCTCACCTCACTGGCCCAACACCACAGCTCCCACACCGGCATGGTCAAGTGCTCCATTTGTGATAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp ACACACTTGAACTGCTGCTCTCGGGCATGCACGCCCTaGTGCTTGTTGAGATGCTCTCGCTGCTTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: THLNCCSRACTP*CLLRCSRCLKA
Trigger: AGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTTCAAGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 72 bp TGTTGGGCCAGTGAGGTGAGCAGGGAGAAGCCCATTTaGCAAACACCGCAGACAAAAGGCTTCTGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: CWASEVSREKPI*QTPQTKGFCSA
Trigger: GGCCGAGCAGAAGCCTTTTGTCTGCGGTGTTTGCAAAATGGGCTTCTCCCTGCTCACCTCACTGGCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CAA 72 bp AACTGCTGCTCTCGGGCATGCACGCCCTGGTGCTTGTaGAGATGCTCTCGCTGCTTGAAGGCTTTATCGCAG +
Preference number: 6 (lower is better)
Translates to: NCCSRACTPWCL*RCSRCLKALSQ
Trigger: CTGCGATAAAGCCTTCAAGCAGCGAGAGCATCTCAACAAGCACCAGGGCGTGCATGCCCGAGAGCAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp CTGATGGAAGATCTTAAGACACTGTGTGCACTGGAATaGGCGGTCGTGGCCTGCCAGGCACTGGTGCTCATG +
Preference number: 6 (lower is better)
Translates to: LMEDLKTLCALE*AVVACQALVLM
Trigger: CATGAGCACCAGTGCCTGGCAGGCCACGACCGCTCATTCCAGTGCACACAGTGTCTTAAGATCTTCCATCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS TCA 72 bp CAGCTGGCTTGTAGGTCTTATCACAAATGGAGCACTTaGCCATGCCGGTGTGGGAGCTGTGGTGTTGGGCCA +
Preference number: 6 (lower is better)
Translates to: QLACRSYHKWST*PCRCGSCGVGP
Trigger: TGGCCCAACACCACAGCTCCCACACCGGCATGGTCAAGTGCTCCATTTGTGATAAGACCTACAAGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8
CDS CCA 72 bp CACTTAAAGGGTTCTTCCGTCTTGTGTGTGCGCCGGTaGCGCATCAGTGCGTACTGCTGTTTGAAGCCCATG +
Preference number: 6 (lower is better)
Translates to: HLKGSSVLCVRR*RISAYCCLKPM
Trigger: CATGGGCTTCAAACAGCAGTACGCACTGATGCGCCACCGGCGCACACACAAGACGGAAGAACCCTTTAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057717.8