Pregenerated sensors for ZFP317 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057551Ensembl transcript IDs: ENSMUST00000079042.7, ENSMUST00000208694.2, ENSMUST00000213725.2, ENSMUST00000215372.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACTCTCTGCCTCAGTTCTTGTGTGTTTGGGAGCATGATACATGTTaGCAGTTTCTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: DSLPQFLCVWEHDTC*QFLATQYKLFPVPR Trigger: CCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAGAAACTGTCAACATGTATCATGCTCCCAAACACACAAGAACTGAGGCAGAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR GCA 90 bp | GTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTaGCTCAGTTCTTGTGTGTTTGGGAGCATGATACATGTTGACAGT | + |
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Preference number: 1 (lower is better) Translates to: VVVLTLALMLRVKTL*LSSCVFGSMIHVDS Trigger: ACTGTCAACATGTATCATGCTCCCAAACACACAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR GCA 90 bp | ACTAAAACCTACCCAGACACTGACAAGTGCCCTGGACAGCAAAACTaGTCCAGGTTGAAAGCCAATGCTACTGACCAAACCTTAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: TKTYPDTDKCPGQQN*SRLKANATDQTLNE Trigger: TTCATTTAAGGTTTGGTCAGTAGCATTGGCTTTCAACCTGGAGCAGTTTTGCTGTCCAGGGCACTTGTCAGTGTCTGGGTAGGTTTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR GCA 90 bp | ACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTaGATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTC | + |
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Preference number: 1 (lower is better) Translates to: TNSSQSLGFHRDPNC*ITTQVFSHFLQTDF Trigger: GAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR GCA 90 bp | AATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTaGTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGAT | + |
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Preference number: 1 (lower is better) Translates to: NTNSSQSLGFHRDPN*CITTQVFSHFLQTD Trigger: ATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR TCA 90 bp | CAAGGTAAACTCTTTCAAAAGCCACAATACAGACTAGTATCACTGTaGTGTCTCTATTCTGTCATCTTTAGACTGCAGTTTTCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: QGKLFQKPQYRLVSL*CLYSVIFRLQFSSS Trigger: TGAAGATGAAAACTGCAGTCTAAAGATGACAGAATAGAGACATCACAGTGATACTAGTCTGTATTGTGGCTTTTGAAAGAGTTTACCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCTGTCATGTGACCTTTTaGGTTTTCTACATGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AHVVVLTLALMLRVKTLCCHVTF*VFYMEG Trigger: ACCTTCCATGTAGAAAACGCAAAAGGTCACATGACA...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGTAGAGATCCCAATTGCTaGATAACAACTCAGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VLTLALMLRVKTLCLSSCRDPNC*ITTQVF Trigger: GAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCT...ACAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTAGAGATCCCAATTGCTaGATAACAACTCAGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FTLVCSRSSADFSTNAQGRDPNC*ITTQVF Trigger: GAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCT...ACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR CAA 90 bp | TACCCAGACACTGACAAGTGCCCTGGACAGCAAAACTGCTCCAGGTaGAAAGCCAATGCTACTGACCAAACCTTAAATGAAGATTTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: YPDTDKCPGQQNCSR*KANATDQTLNEDFY Trigger: ATAAAAATCTTCATTTAAGGTTTGGTCAGTAGCATTGGCTTTCAACCTGGAGCAGTTTTGCTGTCCAGGGCACTTGTCAGTGTCTGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR CAA 90 bp | CTCAGTTCTTGTGTGTTTGGGAGCATGATACATGTTGACAGTTTCTaGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSSCVFGSMIHVDSF*LLNTNSSQSLGFHR Trigger: TCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAGAAACTGTCAACATGTATCATGCTCCCAAACACACAAGAACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGACACAGGTACTCAAAAATACCCACACAATCTAGTACAGAACATCACACACCTGGACAGCAAAACTaGTCCAGGTTGAAAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: IGHRYSKIPTQSSTEHHTPGQQN*SRLKAN Trigger: ATTGGCTTTCAACCTGGAGCAGTTTTGCTGTCCAGG...TGTGTGATGTTCTGTACTAGATTGTGTGGGTATTTTTGAGTACCTGTGTCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACACAATCTAGTACAGAACATCACACATTTCTAAACATGTCTCTGGTCAGGTGTCATGTGACCTTTTaGGTTTTCTACATGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PTQSSTEHHTFLNMSLVRCHVTF*VFYMEG Trigger: ACCTTCCATGTAGAAAACGCAAAAGGTCACATGACA...CCTGACCAGAGACATGTTTAGAAATGTGTGATGTTCTGTACTAGATTGTGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAATGTCATGTGACCTTTTaGGTTTTCTACATGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: HRDPNCCITTQVFSHFLQCHVTF*VFYMEG Trigger: ACCTTCCATGTAGAAAACGCAAAAGGTCACATGACA...TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR GCA 90 bp | TATCACTGTGATGTCTCTATTCTGTCATCTTTAGACTGCAGTTTTCATCTTCAGAGGGTGAAGACTCTCTaGCTCAGTTCTTGTGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YHCDVSILSSLDCSFHLQRVKTL*LSSCVF Trigger: AAACACACAAGAACTGAGGCAGAGAGTCTTCACCCT...CTGAAGATGAAAACTGCAGTCTAAAGATGACAGAATAGAGACATCACAGTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR GCA 72 bp | TACCCAGACACTGACAAGTGCCCTGGACAGCAAAACTaGTCCAGGTTGAAAGCCAATGCTACTGACCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: YPDTDKCPGQQN*SRLKANATDQT Trigger: GGTTTGGTCAGTAGCATTGGCTTTCAACCTGGAGCAGTTTTGCTGTCCAGGGCACTTGTCAGTGTCTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTGTGTCATGTGACCTTTaGCGTTTTCTACATGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VVLTLALMLRVKTLCLSSVSCDL*RFLHGR Trigger: CCTTCCATGTAGAAAACGCAAAAGGTCACATGACAC...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGGTGTCATGTGACCTTTaGCGTTTTCTACATGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SADFSTNAQGEDSLPQFLVSCDL*RFLHGR Trigger: CCTTCCATGTAGAAAACGCAAAAGGTCACATGACAC...CAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR GCA 72 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTaGATAACAACTCAGGTCTTCTCACACTTTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SQSLGFHRDPNC*ITTQVFSHFLQ Trigger: TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR GCA 72 bp | TCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTaGTGCATAACAACTCAGGTCTTCTCACACTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSQSLGFHRDPN*CITTQVFSHFL Trigger: TAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAGTGTCATGTGACCTTTaGCGTTTTCTACATGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: HRDPNCCITTQVFSHFLQVSCDL*RFLHGR Trigger: CCTTCCATGTAGAAAACGCAAAAGGTCACATGACAC...TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCATGTTGACAGTTTCTaGCTACTCAATACAAACTCT | + |
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Preference number: 3 (lower is better) Translates to: CSRSSADFSTNAQGEDSLHVDSF*LLNTNS Trigger: AGAGTTTGTATTGAGTAGCAAGAAACTGTCAACATG...CAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTCATGTTGACAGTTTCTaGCTACTCAATACAAACTCT | + |
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Preference number: 3 (lower is better) Translates to: VVLTLALMLRVKTLCLSSHVDSF*LLNTNS Trigger: AGAGTTTGTATTGAGTAGCAAGAAACTGTCAACATG...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR TCA 72 bp | CTCTTTCAAAAGCCACAATACAGACTAGTATCACTGTaGTGTCTCTATTCTGTCATCTTTAGACTGCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: LFQKPQYRLVSL*CLYSVIFRLQF Trigger: AAACTGCAGTCTAAAGATGACAGAATAGAGACATCACAGTGATACTAGTCTGTATTGTGGCTTTTGAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| CDS-3UTR CCA 90 bp | GTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGTTGTGGGCCTTCCTACTaGCTGAGCAAGGTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLTLALMLRVKTLCLSSCCGPSY*LSKVRA Trigger: GGCCCTCACCTTGCTCAGCCAGTAGGAAGGCCCACA...ACAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGTGTGGGCCTTCCTACTaGCTGAGCAAGGTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DSLWCAHVVVLTLALMLRCGPSY*LSKVRA Trigger: GGCCCTCACCTTGCTCAGCCAGTAGGAAGGCCCACA...CCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCGAGAAGCACTGGTGGTaGAGGCTTTCTGGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: AHVVVLTLALMLRVKTLCEKHWW*RLSGTG Trigger: ACCAGTGCCAGAAAGCCTTCACCACCAGTGCTTCTC...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | TGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGGGTGATAGGGCCTCTTaGCTGTGGGCCTTCCTACTG | + |
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Preference number: 4 (lower is better) Translates to: CSRSSADFSTNAQGEDSLGDRAS*LWAFLL Trigger: CAGTAGGAAGGCCCACAGGCAAGAGGCCCTATCACC...CAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | TTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAGAAGCACTGGTGGTaGAGGCTTTCTGGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: FTLVCSRSSADFSTNAQGEKHWW*RLSGTG Trigger: ACCAGTGCCAGAAAGCCTTCACCACCAGTGCTTCTC...ACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | AGATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGATAGGGCCTCTTaGCTGTGGGCCTTCCTACTG | + |
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Preference number: 4 (lower is better) Translates to: RFTLVCSRSSADFSTNAQGDRAS*LWAFLL Trigger: CAGTAGGAAGGCCCACAGGCAAGAGGCCCTATCACC...CTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGTGTGGGCCTTCCTACTaGCTGAGCAAGGTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLCGPSY*LSKVRA Trigger: GGCCCTCACCTTGCTCAGCCAGTAGGAAGGCCCACA...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGAGGGCCTCTTGCCTGTaGGCCTTCCTACTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLRASCL*AFLLAE Trigger: CTCAGCCAGTAGGAAGGCCCACAGGCAAGAGGCCCT...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCACATGTTCCTTCAGGTaGGAGGGATGCTGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: AHVVVLTLALMLRVKTLCTCSFR*EGCWKA Trigger: AGCCTTCCAGCATCCCTCCCACCTGAAGGAACATGT...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTGGTGAATCCTGTTCTTaGCTCCACAGCTGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: VVLTLALMLRVKTLCLSSGESCS*LHSCGG Trigger: ACCACCACAGCTGTGGAGTCAAGAACAGGATTCACC...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTTCGCTTGTGAGCAATaGGATGGCAGCTCCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VVLTLALMLRVKTLCLSSFACEQ*DGSSCH Trigger: ATGGCAGGAGCTGCCATCTCATTGCTCACAAGCGAA...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAAGGGCCTCTTGCCTGTaGGCCTTCCTACTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HRDPNCCITTQVFSHFLQRASCL*AFLLAE Trigger: CTCAGCCAGTAGGAAGGCCCACAGGCAAGAGGCCCT...TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCGGAGAAGGACCCTGTTaGATTCCTCTCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SQSLGFHRDPNCCITTQVGEGPC*IPLSSI Trigger: AATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCC...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGGGAGAAGGACCCTGTTaGATTCCTCTCTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SADFSTNAQGEDSLPQFLGEGPC*IPLSSI Trigger: AATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCC...CAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACGCTTTCTGGCACTGGTaGCACTTATGCCATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LVCSRSSADFSTNAQGEDAFWHW*HLCHFL Trigger: GAGAAAATGGCATAAGTGTCACCAGTGCCAGAAAGC...GTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACGGCTTTTCTTTCAGGTaGGTTCTTGTGTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LVCSRSSADFSTNAQGEDGFSFR*VLVWLL Trigger: AAGGAGCCACACAAGAACTCACCTGAAAGAAAAGCC...GTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCTCAGGCTCTGGAGCATaGCAAGCAAACAAACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: AHVVVLTLALMLRVKTLCSGSGA*QANKPK Trigger: TTTGGGTTTGTTTGCTTGCCATGCTCCAGAGCCTGA...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAAGGTGAATCCTGTTCTTaGCTCCACAGCTGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LATQYKLFPVPRFSQRSQGESCS*LHSCGG Trigger: ACCACCACAGCTGTGGAGTCAAGAACAGGATTCACC...TTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGGCTTTCTGGCACTGGTaGCACTTATGCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SADFSTNAQGEDSLPQFLAFWHW*HLCHFL Trigger: GAGAAAATGGCATAAGTGTCACCAGTGCCAGAAAGC...CAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | TGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGGGCTTTTCTTTCAGGTaGGTTCTTGTGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSRSSADFSTNAQGEDSLGFSFR*VLVWLL Trigger: AAGGAGCCACACAAGAACTCACCTGAAAGAAAAGCC...CAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTTCGCTTGTGAGCAATaGGATGGCAGCTCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCFACEQ*DGSSCH Trigger: ATGGCAGGAGCTGCCATCTCATTGCTCACAAGCGAA...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | CCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCGGTGATAGGGCCTCTTaGCTGTGGGCCTTCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PNCCITTQVFSHFLQTDFGDRAS*LWAFLL Trigger: CAGTAGGAAGGCCCACAGGCAAGAGGCCCTATCACC...GAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGTCAGGCTCTGGAGCATaGCAAGCAAACAAACCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSLWCAHVVVLTLALMLRSGSGA*QANKPK Trigger: TTTGGGTTTGTTTGCTTGCCATGCTCCAGAGCCTGA...CCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTGTAGTTCCCCAATCTaGAGAAGGACCCTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVCSRSSADFSTNAQGEDCSSPI*RRTLLN Trigger: ATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACA...GTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAAAGGGCCTCTTGCCTGTaGGCCTTCCTACTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCITTQVFSHFLQTDFSERASCL*AFLLAE Trigger: CTCAGCCAGTAGGAAGGCCCACAGGCAAGAGGCCCT...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCACATGTTCCTTCAGGTaGGAGGGATGCTGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCTCSFR*EGCWKA Trigger: AGCCTTCCAGCATCCCTCCCACCTGAAGGAACATGT...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAAACATGTTCCTTCAGGTaGGAGGGATGCTGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LATQYKLFPVPRFSQRSQTCSFR*EGCWKA Trigger: AGCCTTCCAGCATCCCTCCCACCTGAAGGAACATGT...TTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCGGCTTTTCCCCAGTATaGTTTCGGACATGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLGFHRDPNCCITTQVGFSPV*FRTCSF Trigger: GAAGGAACATGTCCGAAACCATACTGGGGAAAAGCC...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGTTGATAGGAGGTCACTaGAGGATTTCCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLWCAHVVVLTLALMLRVLIGGH*RISHIL Trigger: AAGAATGTGGGAAATCCTTCAGTGACCTCCTATCAA...CACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGGGTCTCTCCCCAGTGTaGGAGTTCATGTGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLGLSPV*EFMCVF Trigger: GAAAACACACATGAACTCTCACACTGGGGAGAGACC...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCGGCTTCCTCTGCATTTaGGTATTCACTGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AHVVVLTLALMLRVKTLCGFLCI*VFTETF Trigger: AAAGGTTTCAGTGAATACTCAAATGCAGAGGAAGCC...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGTTTCTCCCATCATTCATaGTCATGTGCTGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLTLALMLRVKTLCLSSCFSHHS*SCAESG Trigger: ACCTGACTCAGCACATGAGCATGAATGATGGGAGAA...ACAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | TTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTTGTAGTTCCCCAATCTaGAGAAGGACCCTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLVCSRSSADFSTNAQGCSSPI*RRTLLN Trigger: ATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACA...ACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | AGATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGCTTTTCCCCAGTATaGTTTCGGACATGTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFTLVCSRSSADFSTNAQGFSPV*FRTCSF Trigger: GAAGGAACATGTCCGAAACCATACTGGGGAAAAGCC...CTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCGGTGAATCCTGTTCTTaGCTCCACAGCTGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PNCCITTQVFSHFLQTDFGESCS*LHSCGG Trigger: ACCACCACAGCTGTGGAGTCAAGAACAGGATTCACC...GAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTTGATAGGAGGTCACTaGAGGATTTCCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLTLALMLRVKTLCLSSLIGGH*RISHIL Trigger: AAGAATGTGGGAAATCCTTCAGTGACCTCCTATCAA...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR GCA 90 bp | AGATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGTTCTCCCATCATTCATaGTCATGTGCTGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RFTLVCSRSSADFSTNAQFSHHS*SCAESG Trigger: ACCTGACTCAGCACATGAGCATGAATGATGGGAGAA...CTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| 3UTR CAA 72 bp | ACTGACAAGTGCCCTGGACAGCAAAACTGCTCCAGGTaGAAAGCCAATGCTACTGACCAAACCTTAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDKCPGQQNCSR*KANATDQTLNE Trigger: TTCATTTAAGGTTTGGTCAGTAGCATTGGCTTTCAACCTGGAGCAGTTTTGCTGTCCAGGGCACTTGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTGGAAGAGAAAATTCTaGTTCCTGGTTATCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQSLGFHRDPNCCITTQVWKRKF*FLVICR Trigger: TCTGCAGATAACCAGGAATCAGAATTTTCTCTTCCA...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTACAAACTGATTTCTCTGAAGTGTCATGTGACCTTTTGCGTTTTCTAGAGAAGCACTGGTGGTaGAGGCTTTCTGGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLQTDFSEVSCDLLRFLEKHWW*RLSGTG Trigger: ACCAGTGCCAGAAAGCCTTCACCACCAGTGCTTCTC...TAGAAAACGCAAAAGGTCACATGACACTTCAGAGAAATCAGTTTGTAGAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | TTTCTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCGGCTTTTCTTTCAGGTaGGTTCTTGTGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLATQYKLFPVPRFSQRSGFSFR*VLVWLL Trigger: AAGGAGCCACACAAGAACTCACCTGAAAGAAAAGCC...GGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTCTTCTTATGCAAATTaGAGTTGGACTTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VVLTLALMLRVKTLCLSSSSYAN*SWTSIG Trigger: TCCGATGGAAGTCCAACTTCAATTTGCATAAGAAGA...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGGGTTGGATCCTATGCTaGAAGCTTTTCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLGWILC*KLFHNG Trigger: ACCATTGTGGAAAAGCTTTCAGCATAGGATCCAACC...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCGGTTGGATCCTATGCTaGAAGCTTTTCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCGWILC*KLFHNG Trigger: ACCATTGTGGAAAAGCTTTCAGCATAGGATCCAACC...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | AGATTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGCTTCCTCTGCATTTaGGTATTCACTGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RFTLVCSRSSADFSTNAQGFLCI*VFTETF Trigger: AAAGGTTTCAGTGAATACTCAAATGCAGAGGAAGCC...CTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | TTCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAAATTCTGATTCCTaGTTATCTGCAGAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLVCSRSSADFSTNAQGENSDS*LSAESR Trigger: TCTGGACTCTGCAGATAACCAGGAATCAGAATTTTC...ACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGTACAGTTTTCTCTaGGAAGAATCTAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LATQYKLFPVPRFSQRSQLYSFL*EESSRG Trigger: GCCCCTGCTAGATTCTTCCCAGAGAAAACTGTACAA...TTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGTGTAGTTCCCCAATCTaGAGAAGGACCCTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLCSSPI*RRTLLN Trigger: ATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACA...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | CACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAACGCTTCTTGACAAGATaGATGCTCATGTGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRDPNCCITTQVFSHFLQRFLTR*MLMCLL Trigger: AAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCG...TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | CATGTATATCAGAATTTGAGTGCCATGTACAGCCCCTGCCAGATTTTTCTTTTTGGAGAAGGACCCTGTTaGATTCCTCTCTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HVYQNLSAMYSPCQIFLFGEGPC*IPLSSI Trigger: AATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCC...AAAAAGAAAAATCTGGCAGGGGCTGTACATGGCACTCAAATTCTGATATACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| CDS-3UTR TCA 90 bp | TGTATCACTAACACATCTCCCTCCATTCTCAAAACTAAAACCTACCCAGACACTGCTTTCTGGCACTGGTaGCACTTATGCCATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CITNTSPSILKTKTYPDTAFWHW*HLCHFL Trigger: GAGAAAATGGCATAAGTGTCACCAGTGCCAGAAAGC...AGTGTCTGGGTAGGTTTTAGTTTTGAGAATGGAGGGAGATGTGTTAGTGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| CDS-3UTR TCA 90 bp | AATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTTTCGCTTGTGAGCAATaGGATGGCAGCTCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCCITTQVFSHFLQTDFSFACEQ*DGSSCH Trigger: ATGGCAGGAGCTGCCATCTCATTGCTCACAAGCGAA...AGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAAGGTCTCTCCCCAGTGTaGGAGTTCATGTGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCITTQVFSHFLQTDFSEGLSPV*EFMCVF Trigger: GAAAACACACATGAACTCTCACACTGGGGAGAGACC...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | GCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGGGCTTCCTCTGCATTTaGGTATTCACTGAAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATQYKLFPVPRFSQRSQLGFLCI*VFTETF Trigger: AAAGGTTTCAGTGAATACTCAAATGCAGAGGAAGCC...CAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR GCA 90 bp | TCACTCTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGTCTTACATCATCAGATaGTTCCTTCCCAAAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: SLWCAHVVVLTLALMLRVSYIIR*FLPKNI Trigger: GATATTTTTGGGAAGGAAGCATCTGATGATGTAAGA...CACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAGAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| 3UTR CAA 72 bp | TGTGTGTTTGGGAGCATGATACATGTTGACAGTTTCTaGCTACTCAATACAAACTCTTCCCAGTCCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVFGSMIHVDSF*LLNTNSSQSLG Trigger: ACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAGAAACTGTCAACATGTATCATGCTCCCAAACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGGAAGAGAAAATTCTaGTTCCTGGTTATCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCWKRKF*FLVICR Trigger: TCTGCAGATAACCAGGAATCAGAATTTTCTCTTCCA...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | CTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATCTTCTTATGCAAATTaGAGTTGGACTTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LATQYKLFPVPRFSQRSQSSYAN*SWTSIG Trigger: TCCGATGGAAGTCCAACTTCAATTTGCATAAGAAGA...TTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTACAAACTGATTTCTCTGAAGTGTCATGTGACCTTTTGCGTTTTCTAGGTCTCTCCCCAGTGTaGGAGTTCATGTGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HFLQTDFSEVSCDLLRFLGLSPV*EFMCVF Trigger: GAAAACACACATGAACTCTCACACTGGGGAGAGACC...TAGAAAACGCAAAAGGTCACATGACACTTCAGAGAAATCAGTTTGTAGAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAACGCTTCTTGACAAGATaGATGCTCATGTGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCITTQVFSHFLQTDFSERFLTR*MLMCLL Trigger: AAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCG...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAAGGTTGGATCCTATGCTaGAAGCTTTTCCACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCITTQVFSHFLQTDFSEGWILC*KLFHNG Trigger: ACCATTGTGGAAAAGCTTTCAGCATAGGATCCAACC...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CCA 90 bp | AATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTCGCTTCTTGACAAGATaGATGCTCATGTGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCCITTQVFSHFLQTDFSRFLTR*MLMCLL Trigger: AAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCG...AGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACCCAGTGAACTTAGATTaGTATAATTCTCCAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: KLFPVPRFSQRSQLLHNNPVNLD*YNSPAL Trigger: TAATGCTGGAGAATTATAGCAATCTAAGTTCACTGG...GTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | CTTGCTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATCTTACATCATCAGATaGTTCCTTCCCAAAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LATQYKLFPVPRFSQRSQSYIIR*FLPKNI Trigger: GATATTTTTGGGAAGGAAGCATCTGATGATGTAAGA...TTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | CACTTTCTACAAACTGATTTCTCTGAAGTGTCATGTGACCTTTTGCGTTTTCTATTCTCCCATCATTCATaGTCATGTGCTGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLQTDFSEVSCDLLRFLFSHHS*SCAESG Trigger: ACCTGACTCAGCACATGAGCATGAATGATGGGAGAA...TAGAAAACGCAAAAGGTCACATGACACTTCAGAGAAATCAGTTTGTAGAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAAGAGGTTTTTCTCAGAATGCCACACACTTATCTCTATTTATGAGTCATGGTGTATCAGGCTCTaGAGCATGGCAAGCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKRFFSECHTLISIYESWCIRL*SMASKQ Trigger: TTGTTTGCTTGCCATGCTCCAGAGCCTGATACACCA...TGACTCATAAATAGAGATAAGTGTGTGGCATTCTGAGAAAAACCTCTTGGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
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| CDS-3UTR TCA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAATCTTCTTATGCAAATTaGAGTTGGACTTCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CCITTQVFSHFLQTDFSESSYAN*SWTSIG Trigger: TCCGATGGAAGTCCAACTTCAATTTGCATAAGAAGA...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR TCA 90 bp | AATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTTTGATAGGAGGTCACTaGAGGATTTCCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCCITTQVFSHFLQTDFSLIGGH*RISHIL Trigger: AAGAATGTGGGAAATCCTTCAGTGACCTCCTATCAA...AGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR GCA 90 bp | CACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAATCTTACATCATCAGATaGTTCCTTCCCAAAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: HRDPNCCITTQVFSHFLQSYIIR*FLPKNI Trigger: GATATTTTTGGGAAGGAAGCATCTGATGATGTAAGA...TTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAAGAGGTTTTTCTCAGAATGCCACACACTTATCTCTATTTATGAGTCATTGTACAGTTTTCTCTaGGAAGAATCTAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSKRFFSECHTLISIYESLYSFL*EESSRG Trigger: GCCCCTGCTAGATTCTTCCCAGAGAAAACTGTACAA...TGACTCATAAATAGAGATAAGTGTGTGGCATTCTGAGAAAAACCTCTTGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| 3UTR CAA 72 bp | TGGGAAATCCTAGGTCCTTGTTATTCTTTTGGCTTTTaGGATAGAAAGCCAAACCCAACTAAAGGATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WEILGPCYSFGF*DRKPNPTKGSV Trigger: AACAGATCCTTTAGTTGGGTTTGGCTTTCTATCCAAAAAGCCAAAAGAATAACAAGGACCTAGGATTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| CDS-3UTR CCA 90 bp | TATCACTGTGATGTCTCTATTCTGTCATCTTTAGACTGCAGTTTTCATCTTCAGGAAAATTCTGATTCCTaGTTATCTGCAGAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YHCDVSILSSLDCSFHLQENSDS*LSAESR Trigger: TCTGGACTCTGCAGATAACCAGGAATCAGAATTTTC...CTGAAGATGAAAACTGCAGTCTAAAGATGACAGAATAGAGACATCACAGTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| CDS-3UTR TCA 90 bp | CACTTTCTACAAACTGATTTCTCTGAAGTGTCATGTGACCTTTTGCGTTTTCTAGGCTTCTTTACAATATaGATCCTCATGTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFLQTDFSEVSCDLLRFLGFFTI*ILMCFL Trigger: AAGGAAACACATGAGGATTCATATTGTAAAGAAGCC...TAGAAAACGCAAAAGGTCACATGACACTTCAGAGAAATCAGTTTGTAGAAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR TCA 90 bp | AATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGGCTTCTTTACAATATaGATCCTCATGTGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NCCITTQVFSHFLQTDFSGFFTI*ILMCFL Trigger: AAGGAAACACATGAGGATTCATATTGTAAAGAAGCC...AGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR GCA 90 bp | ATAGGACACAGGTACTCAAAAATACCCACACAATCTAGTACAGAACATCACACACCAGTGAACTTAGATTaGTATAATTCTCCAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IGHRYSKIPTQSSTEHHTPVNLD*YNSPAL Trigger: TAATGCTGGAGAATTATAGCAATCTAAGTTCACTGG...TGTGTGATGTTCTGTACTAGATTGTGTGGGTATTTTTGAGTACCTGTGTCCTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| CDS TCA 90 bp | TCCCATCATTCATGCTCATGTGCTGAGTCAGGTGAATCCTGTTCTTaGCTCCACAGCTGTGGTGGTGATAGGGCCTCTTGCCTGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHHSCSCAESGESCS*LHSCGGDRASCLWA Trigger: GGCCCACAGGCAAGAGGCCCTATCACCACCACAGCTGTGGAGTCAAGAACAGGATTCACCTGACTCAGCACATGAGCATGAATGATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCAGAGCTGAAGGGTCATaGAAGGCTTTTCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHVVVLTLALMLRVKTLCRAEGS*KAFPQL Trigger: CAGCTGTGGAAAAGCCTTCAATGACCCTTCAGCTCT...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | GCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTTTCAGGTGAGTTCTaGTGTGGCTCCTTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHVVVLTLALMLRVKTLCLSGEF*CGSLEL Trigger: CAGCTCTAAGGAGCCACACAAGAACTCACCTGAAAG...GCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCTTCCATCGGAAGGCTTaGCCACACTGTGTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSLGFHRDPNCCITTQVFHRKA*PHCVHS Trigger: TGAGTGCACACAGTGTGGCAAAGCCTTCCGATGGAA...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | TGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGTGGAGAAGGACCCTGTaGAATTCCTCTCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSRSSADFSTNAQGEDSLWRRTL*NSSLLH Trigger: ATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCCA...CAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | AGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTTGAGAGCTGAAGGGTCATaGAAGGCTTTTCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SADFSTNAQGEDSLPQFLRAEGS*KAFPQL Trigger: CAGCTGTGGAAAAGCCTTCAATGACCCTTCAGCTCT...CAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCCTTTCAGGTGAGTTCTaGTGTGGCTCCTTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLGFHRDPNCCITTQVLSGEF*CGSLEL Trigger: CAGCTCTAAGGAGCCACACAAGAACTCACCTGAAAG...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | CTGGTGTGCTCACGTAGTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACCGGTGTACATTAAGGTaGGATCCTATGCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVCSRSSADFSTNAQGEDRCTLR*DPMLKA Trigger: AGCTTTCAGCATAGGATCCAACCTTAATGTACACCG...GTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTACTACGTGAGCACACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 90 bp | ATCCACCCGCTTCTTGACAAGATGGATGCTCATGTGCCTCCTTCGTaGCAGGTAATCACCAAAGACCTTTCCACAGGAAGTACATTCATA | + |
|
Preference number: 5 (lower is better) Translates to: IHPLLDKMDAHVPPS*QVITKDLSTGSTFI Trigger: TATGAATGTACTTCCTGTGGAAAGGTCTTTGGTGATTACCTGTCACGAAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCGGGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTGAGGACATAGCAAACTaGGGAGATAGACTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VVLTLALMLRVKTLCLSSEDIAN*GDRLMV Trigger: TACCATCAGTCTATCTCCCAAGTTTGCTATGTCCTC...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACTCAGGTCGTCCACAGCAATATCTaGAAATGTCACAGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLGFHRDPNCCITTQVVHSNI*KCHRLL Trigger: CAGGAGTCTGTGACATTTCAAGATATTGCTGTGGAC...GACCTGAGTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | AAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGCATAACAACCTTTCAGGTGAGTTCTaGTGTGGCTCCTTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLFPVPRFSQRSQLLHNNLSGEF*CGSLEL Trigger: CAGCTCTAAGGAGCCACACAAGAACTCACCTGAAAG...GTTGTTATGCAGCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | GTAGTGCTGACTTTAGCACTAATGCTCAGGGTGAAGACTCTCTGCCTCAGTTCTCGGTGTACATTAAGGTaGGATCCTATGCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLTLALMLRVKTLCLSSRCTLR*DPMLKA Trigger: AGCTTTCAGCATAGGATCCAACCTTAATGTACACCG...AGAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 90 bp | CATTTGACTTTAGATGTAGTTCCCCAATCTGGAGAAGGACCCTGTTaGATTCCTCTCTCCTCCATTCTCAGATCCTCTTCTTGCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLTLDVVPQSGEGPC*IPLSSILRSSSCSR Trigger: CCTAGAGCAAGAAGAGGATCTGAGAATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACATCTAAAGTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS CCA 90 bp | AGCAATATCTTGAAATGTCACAGACTCCTGAGAACAAACACGAGCTaGTGTATCAGGCTCTGGAGCATGGCAAGCAAACAAACCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SNILKCHRLLRTNTS*CIRLWSMASKQTQT Trigger: AGTTTGGGTTTGTTTGCTTGCCATGCTCCAGAGCCTGATACACCAGCTCGTGTTTGTTCTCAGGAGTCTGTGACATTTCAAGATATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | CCCAATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTTCCATCGGAAGGCTTaGCCACACTGTGTGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNCCITTQVFSHFLQTDFFHRKA*PHCVHS Trigger: TGAGTGCACACAGTGTGGCAAAGCCTTCCGATGGAA...GAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCGTCCACAGCAATATCTaGAAATGTCACAGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCVHSNI*KCHRLL Trigger: CAGGAGTCTGTGACATTTCAAGATATTGCTGTGGAC...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | CTACTCAATACAAACTCTTCCCAGTCCCTAGGTTTTCACAGAGATCCCAATTGCTGTCTTCAGAGTGGATaGATTCCTGAAGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLNTNSSQSLGFHRDPNCCLQSG*IPEGFS Trigger: GGAAAAGCCTTCAGGAATCAATCCACTCTGAAGACA...GCAATTGGGATCTCTGTGAAAACCTAGGGACTGGGAAGAGTTTGTATTGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS CCA 90 bp | TTCCAGAAGAATAGACCATTTGACTTTAGATGTAGTTCCCCAATCTaGAGAAGGACCCTGTTGAATTCCTCTCTCCTCCATTCTCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FQKNRPFDFRCSSPI*RRTLLNSSLLHSQI Trigger: GATCTGAGAATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACATCTAAAGTCAAATGGTCTATTCTTCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS-3UTR CAA 90 bp | CCCACACAATCTAGTACAGAACATCACACATTTCTAAACATGTCTCTGGTCAGGTGTCTTCAGAGTGGATaGATTCCTGAAGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTQSSTEHHTFLNMSLVRCLQSG*IPEGFS Trigger: GGAAAAGCCTTCAGGAATCAATCCACTCTGAAGACA...CCTGACCAGAGACATGTTTAGAAATGTGTGATGTTCTGTACTAGATTGTGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| CDS TCA 90 bp | GCTGAGCAAGGTGAGGGCCAATATCAAAGACTTCACACAAGTGGCTaGATTCAGAAGATGTCTCCAAAAGATGAGATGTTTCCAATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: AEQGEGQYQRLHTSG*IQKMSPKDEMFPIL Trigger: TAAGATTGGAAACATCTCATCTTTTGGAGACATCTTCTGAATTCAGCCACTTGTGTGAAGTCTTTGATATTGGCCCTCACCTTGCTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CAA 90 bp | CATAGTTATCATCAGTATGCGTTTTCATACATTTCAGAGAGAACTGCATTGCAGAGAGCTGAAGGGTCATaGAAGGCTTTTCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSYHQYAFSYISERTALQRAEGS*KAFPQL Trigger: CAGCTGTGGAAAAGCCTTCAATGACCCTTCAGCTCT...CTGCAATGCAGTTCTCTCTGAAATGTATGAAAACGCATACTGATGATAACTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208694.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAACGGTGTACATTAAGGTaGGATCCTATGCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CCITTQVFSHFLQTDFSERCTLR*DPMLKA Trigger: AGCTTTCAGCATAGGATCCAACCTTAATGTACACCG...TTCAGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CAA 90 bp | AATTGCTGCATAACAACTCAGGTCTTCTCACACTTTCTACAAACTGATTTCTCTGAGGACATAGCAAACTaGGGAGATAGACTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: NCCITTQVFSHFLQTDFSEDIAN*GDRLMV Trigger: TACCATCAGTCTATCTCCCAAGTTTGCTATGTCCTC...AGAGAAATCAGTTTGTAGAAAGTGTGAGAAGACCTGAGTTGTTATGCAGCAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208694.2 ENSMUST00000215372.2 |
||
| CDS-3UTR CAA 90 bp | CACTTTCTACAAACTGATTTCTCTGAAGTGTCATGTGACCTTTTGCGTTTTCTATGTCTTCAGAGTGGATaGATTCCTGAAGGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HFLQTDFSEVSCDLLRFLCLQSG*IPEGFS Trigger: GGAAAAGCCTTCAGGAATCAATCCACTCTGAAGACA...TAGAAAACGCAAAAGGTCACATGACACTTCAGAGAAATCAGTTTGTAGAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS CCA 72 bp | CTCCACAGCTGTGGTGGTGATAGGGCCTCTTGCCTGTaGGCCTTCCTACTGGCTGAGCAAGGTGAGGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHSCGGDRASCL*AFLLAEQGEGQ Trigger: TTGGCCCTCACCTTGCTCAGCCAGTAGGAAGGCCCACAGGCAAGAGGCCCTATCACCACCACAGCTGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS TCA 72 bp | TCATGCTCATGTGCTGAGTCAGGTGAATCCTGTTCTTaGCTCCACAGCTGTGGTGGTGATAGGGCCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSCAESGESCS*LHSCGGDRASC Trigger: GCAAGAGGCCCTATCACCACCACAGCTGTGGAGTCAAGAACAGGATTCACCTGACTCAGCACATGAGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
||
| CDS TCA 72 bp | AGGCTTTTCCGCACTGCCTACAATCCACCCGCTTCTTaGCAAGATGGATGCTCATGTGCCTCCTTCGTGACA | + |
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Preference number: 6 (lower is better) Translates to: RLFRTAYNPPAS*QDGCSCASFVT Trigger: TGTCACGAAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCGGGTGGATTGTAGGCAGTGCGGAAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS CAA 72 bp | AAGGCTTTTCCGCACTGCCTACAATCCACCCGCTTCTaGACAAGATGGATGCTCATGTGCCTCCTTCGTGAC | + |
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Preference number: 6 (lower is better) Translates to: KAFPHCLQSTRF*TRWMLMCLLRD Trigger: GTCACGAAGGAGGCACATGAGCATCCATCTTGTCAAGAAGCGGGTGGATTGTAGGCAGTGCGGAAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 72 bp | CCATTCTCAGATCCTCTTCTTGCTCTAGGTGTGAGATaGGGCGGGGTTTGCCAACCTGATAACCCAGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: PFSDPLLALGVR*GGVCQPDNPVN Trigger: GTTCACTGGGTTATCAGGTTGGCAAACCCCGCCTCATCTCACACCTAGAGCAAGAAGAGGATCTGAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS CCA 72 bp | CTCCTGAGAACAAACACGAGCTGGTGTATCAGGCTCTaGAGCATGGCAAGCAAACAAACCCAAACTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLRTNTSWCIRL*SMASKQTQTLL Trigger: CAGCAGAGTTTGGGTTTGTTTGCTTGCCATGCTCCAGAGCCTGATACACCAGCTCGTGTTTGTTCTCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS TCA 72 bp | CCATTCTCAGATCCTCTTCTTGCTCTAGGTGTGAGATaGGGCGGGGTTTGCCAACCTGATAACCAAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: PFSDPLLALGVR*GGVCQPDNQTW Trigger: CCAAGTTTGGTTATCAGGTTGGCAAACCCCGCCTCATCTCACACCTAGAGCAAGAAGAGGATCTGAGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213725.2 |
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| CDS TCA 72 bp | AGAGAAGCACTGGTGGTGAAGGCTTTCTGGCACTGGTaGCACTTATGCCATTTTCTCCCATCATTCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: REALVVKAFWHW*HLCHFLPSFML Trigger: GAGCATGAATGATGGGAGAAAATGGCATAAGTGTCACCAGTGCCAGAAAGCCTTCACCACCAGTGCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 72 bp | CTTCTTGACAAGATGGATGCTCATGTGCCTCCTTCGTaGCAGGTAATCACCAAAGACCTTTCCACAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LLDKMDAHVPPS*QVITKDLSTGS Trigger: ACTTCCTGTGGAAAGGTCTTTGGTGATTACCTGTCACGAAGGAGGCACATGAGCATCCATCTTGTCAAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 72 bp | ATGTTTGCCAGGCTTCCTCTGCATTTGAGTATTCACTaGAACCTTTCCCACACAGACGGCGTAAAGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MFARLPLHLSIH*NLSHTDGVKSF Trigger: GAAGCTCTTTACGCCGTCTGTGTGGGAAAGGTTTCAGTGAATACTCAAATGCAGAGGAAGCCTGGCAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS CCA 72 bp | TTGAAATGTCACAGACTCCTGAGAACAAACACGAGCTaGTGTATCAGGCTCTGGAGCATGGCAAGCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: LKCHRLLRTNTS*CIRLWSMASKQ Trigger: TTGTTTGCTTGCCATGCTCCAGAGCCTGATACACCAGCTCGTGTTTGTTCTCAGGAGTCTGTGACATTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000215372.2 |
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| CDS CAA 72 bp | TTTAGATGTAGTTCCCCAATCTGGAGAAGGACCCTGTaGAATTCCTCTCTCCTCCATTCTCAGATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRCSSPIWRRTL*NSSLLHSQILF Trigger: GAAGAGGATCTGAGAATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCCAGATTGGGGAACTACATCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS TCA 72 bp | GGTGAGGGCCAATATCAAAGACTTCACACAAGTGGCTaGATTCAGAAGATGTCTCCAAAAGATGAGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: GEGQYQRLHTSG*IQKMSPKDEMF Trigger: AAACATCTCATCTTTTGGAGACATCTTCTGAATTCAGCCACTTGTGTGAAGTCTTTGATATTGGCCCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000213725.2 ENSMUST00000215372.2 |
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| CDS CAA 90 bp | CATGGCAAGCAAACAAACCCAAACTCTGCTGACAAGAATCATATTTaGATGGAAGAGAAAATTCTGATTCCTGGTTATCTGCAGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HGKQTNPNSADKNHI*MEEKILIPGYLQSP Trigger: TGGACTCTGCAGATAACCAGGAATCAGAATTTTCTCTTCCATCAAAATATGATTCTTGTCAGCAGAGTTTGGGTTTGTTTGCTTGCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079042.7 ENSMUST00000208694.2 ENSMUST00000215372.2 |
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