Pregenerated sensors for ZFP316 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046658Ensembl transcript IDs: ENSMUST00000051665.9, ENSMUST00000161448.8
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTGACCACAGCGGAGGGGACAGGGTGGAAACACTGGAGACTATaGGGGATGGGTGGCACCCTCCCGGACCACCCTGCCCTGGCTCGA | + |
|
Preference number: 1 (lower is better) Translates to: LLTTAEGTGWKHWRL*GMGGTLPDHPALAR Trigger: TCGAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTCCCCTCCGCTGTGGTCAGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 90 bp | CCACAGCGGAGGGGACAGGGTGGAAACACTGGAGACTATGAGGGATaGGTGGCACCCTCCCGGACCACCCTGCCCTGGCTCGATCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: PQRRGQGGNTGDYEG*VAPSRTTLPWLDLK Trigger: CTTCAGATCGAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTCCCCTCCGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 90 bp | TTTTACAGGACGAGCGGGAAGATTCCCGGACCCACCCCAGTGCTGTaGAAAGGCTGGCTGAGCACAGGGCTCCACAGCCACCTGCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: FYRTSGKIPGPTPVL*KGWLSTGLHSHLLQ Trigger: CTGGAGCAGGTGGCTGTGGAGCCCTGTGCTCAGCCAGCCTTTCCACAGCACTGGGGTGGGTCCGGGAATCTTCCCGCTCGTCCTGTAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | AGAGGCCAAACCCACCAAGAAACCCAAATGCACCAGAGAGCCCGGTaGCAGACTCCTAAGCAGCGGGGCTCTAGGGCACCTGAACCGGAT | + |
|
Preference number: 1 (lower is better) Translates to: RGQTHQETQMHQRAR*QTPKQRGSRAPEPD Trigger: ATCCGGTTCAGGTGCCCTAGAGCCCCGCTGCTTAGGAGTCTGTCACCGGGCTCTCTGGTGCATTTGGGTTTCTTGGTGGGTTTGGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | ACCCACCCACCCACGGCAGAAACACTGCCTGCTCCTAGTGTAGGGTaGTTACAGAGGCTGTGTGAAGAGGCTTGCAGAGGATGTTGGGCC | + |
|
Preference number: 1 (lower is better) Translates to: THPPTAETLPAPSVG*LQRLCEEACRGCWA Trigger: GGCCCAACATCCTCTGCAAGCCTCTTCACACAGCCTCTGTAATCACCCTACACTAGGAGCAGGCAGTGTTTCTGCCGTGGGTGGGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 90 bp | AGGGAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTaGTCACCTTTCACAGGTCACTGGGGCTCCTCCCTCCTTGGTAAT | + |
|
Preference number: 1 (lower is better) Translates to: REGMARLSPPNVTLS*SPFTGHWGSSLLGN Trigger: ATTACCAAGGAGGGAGGAGCCCCAGTGACCTGTGAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | CTTGTGAGCTGCCATCAGTTCCCCTGGAAGAGCAGCCAGTGTTGTTaGCTGCTGAGCCCTCTCTGCTGCCCACTGTTGTTGAGACTTCGT | + |
|
Preference number: 1 (lower is better) Translates to: LVSCHQFPWKSSQCC*LLSPLCCPLLLRLR Trigger: ACGAAGTCTCAACAACAGTGGGCAGCAGAGAGGGCTCAGCAGTCAACAACACTGGCTGCTCTTCCAGGGGAACTGATGGCAGCTCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 90 bp | CCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTaGGCCCCAAGGTCATGTCTATACTACAAGAAAGGATCTAGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: PWTTHPAPSSLPVSS*APRSCLYYKKGSRS Trigger: AGACCTAGATCCTTTCTTGTAGTATAGACATGACCTTGGGGCCCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | AGTCCCCAAGCTTGTTTCTCCGTCTTTATTAAAGCTAGGTCCTCCTaGCCACAGCGGAGGGGACAGGGTGGAAACACTGGAGACTATGAG | + |
|
Preference number: 1 (lower is better) Translates to: SPQACFSVFIKARSS*PQRRGQGGNTGDYE Trigger: CTCATAGTCTCCAGTGTTTCCACCCTGTCCCCTCCGCTGTGGTCAGGAGGACCTAGCTTTAATAAAGACGGAGAAACAAGCTTGGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 90 bp | GTGTCTGTAGGAGCCCACACCAGGCACCCCAAAGATGTCCACGTGTaGTACTTACAGCCACTAGAGAACAAACTGAGAGAGGATAGCAAT | + |
|
Preference number: 1 (lower is better) Translates to: VSVGAHTRHPKDVHV*YLQPLENKLREDSN Trigger: ATTGCTATCCTCTCTCAGTTTGTTCTCTAGTGGCTGTAAGTAGCACACGTGGACATCTTTGGGGTGCCTGGTGTGGGCTCCTACAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 90 bp | AGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGCGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: RASDLITDGCEPPCG*WDLNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | TTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCCACCGCTGGAGTTCTTACAATTCAT | + |
|
Preference number: 1 (lower is better) Translates to: FELRTFGRAVSALNH*AISPAPTAGVLTIH Trigger: ATGAATTGTAAGAACTCCAGCGGTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 90 bp | CAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATaGGGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: QKRASDLITDGCEPP*GCWDLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 90 bp | AACTCCCCAGGGTCCTGGACAATATCTGCGACCTGGCTATGCATTTaGTATCTTGCTTTTTCAACTCCTCCCACACTCTTCGGGTCATAT | + |
|
Preference number: 1 (lower is better) Translates to: NSPGSWTISATWLCI*YLAFSTPPTLFGSY Trigger: ATATGACCCGAAGAGTGTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTCCAGGACCCTGGGGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 90 bp | TGTTTCTTTAAGATTTATTTATGTGAGTACACTGTAGCTGTTTTCTaGCACTCCAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTG | + |
|
Preference number: 1 (lower is better) Translates to: CFFKIYLCEYTVAVF*HSRRGHQISLQMVV Trigger: CACAACCATCTGTAATGAGATCTGATGCCCTCTTCTGGAGTGTCAGAAAACAGCTACAGTGTACTCACATAAATAAATCTTAAAGAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCTGGGAGGGGCTCCTGTaGGCCACACCACAGGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EGMARLSPPNVTLSWSPFWEGLL*ATPQVP Trigger: TGGCACCTGTGGTGTGGCTCACAGGAGCCCCTCCCA...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCCCATCCCACCGCCCCTaGACCACAGATCGAGGGACG | + |
|
Preference number: 2 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGPSHRP*TTDRGT Trigger: CGTCCCTCGATCTGTGGTGCAGGGGCGGTGGGATGG...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGGCTCCACAGCCACCTaGTCCAGGGGAGGGATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQGSTAT*SRGGIC Trigger: GCAGATCCCTCCCCTGGAGCAGGTGGCTGTGGAGCC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCCACTGTAAGGGGCCTTGCATAGTAAGGCGCTGTGAGCTCAGCTCCACGGGGATCTCCCAAGGAGAATaGGTAGAGGCCAAACCCACC | + |
|
Preference number: 2 (lower is better) Translates to: VHCKGPCIVRRCELSSTGISQGE*VEAKPT Trigger: GGTGGGTTTGGCCTCTACTCATTCTCCTTGGGAGAT...CCCCGTGGAGCTGAGCTCACAGCGCCTTACTATGCAAGGCCCCTTACAGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCGAGCATTGGAGTCCCTaGGAAAAGGGCAGGCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EGMARLSPPNVTLSWSPFEHWSP*EKGRPG Trigger: GCCTGGCCTGCCCTTTTCTCAGGGACTCCAATGCTC...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCCACCCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTGGACCAAGAAACCCAAATaGACCAGAGAGCCCGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SHPWTTHPAPSSLPVSSWTKKPK*TREPGD Trigger: GTCACCGGGCTCTCTGGTGCATTTGGGTTTCTTGGT...CCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCGTGCTGTGGAAAGGCTaGCTGAGCACAGGGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGVLWKG*LSTGLH Trigger: GTGGAGCCCTGTGCTCAGCCAGCCTTTCCACAGCAC...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCCCCACCCCAGTGCTGTaGAAAGGCTGGCTGAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGPTPVL*KGWLST Trigger: TGTGCTCAGCCAGCCTTTCCACAGCACTGGGGTGGG...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTAGGATTCTCTCTTCCCACCCATaGACTACCCACCCAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: GWPRNQKFACLCLPSARILSSHP*TTHPAP Trigger: AGGTGCTGGGTGGGTAGTCCATGGGTGGGAAGAGAG...AATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGCAGCACCTAGCAGCCTaGCTGTTAGCTCTTGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: WKVGILRKLYQLSCIPCPQHLAA*LLALGP Trigger: GGGCCCAAGAGCTAACAGGCAGGCTGCTAGGTGCTG...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCAGTCCCCAGTCACACTaGCCCAGAATTCATGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EGMARLSPPNVTLSWSPFSPQSH*PRIHGG Trigger: CCCTCCATGAATTCTGGGCCAGTGTGACTGGGGACT...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGCGGGGGTCCTTTATGTaGAGACCCACCCACCCACGG | + |
|
Preference number: 2 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGRGSFM*RPTHPR Trigger: CCGTGGGTGGGTGGGTCTCCACATAAAGGACCCCCG...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCTGGCCCAGAATTCATaGAGGGTGGGAGGGGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RMVNSPILTPSPRCWGNVLAQNS*RVGGAP Trigger: AGGAGCCCCTCCCACCCTCCATGAATTCTGGGCCAG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 90 bp | GGTTGTGAGCCACCATGCGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSGP*EEQSVLLTTEPSLQ Trigger: CTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGCTGTGTGAAGAGGCTTaGAGAGGATGTTGGGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WKVGILRKLYQLSCIPCPLCEEA*RGCWAL Trigger: AAGGGCCCAACATCCTCTGCAAGCCTCTTCACACAG...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCAGCCCGCCAAAGAGCTaGAGGACACGCCGAGCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: SCMGVLSICLCATYVSHVSPPKS*RTRRAS Trigger: CGAAGCTCGGCGTGTCCTCCAGCTCTTTGGCGGGCT...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCCCAAAGATGTCCACGTGTGCTACTTACAGCCACTAGAGAACAAACTGAGACCGAGCACCCAAGAGTaGGAATCCTCAGCCCGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: HPKDVHVCYLQPLENKLRPSTQE*ESSARQ Trigger: TTGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGG...TCTCAGTTTGTTCTCTAGTGGCTGTAAGTAGCACACGTGGACATCTTTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCCAAAGTCCATGTGGTaGCCAGCGCTTGCCAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: RMVNSPILTPSPRCWGNVPKSMW*PALARP Trigger: AGGTCTGGCAAGCGCTGGCCACCACATGGACTTTGG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCACCCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTGGAAAAGGGAATGCAGTTaGGTGGAAATCTCACTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SHPWTTHPAPSSLPVSSWKRECS*VEISLL Trigger: GAGAAGTGAGATTTCCACCCAACTGCATTCCCTTTT...CCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGATGTCAGAAAGGAGATaGGCCTTCCAGAGTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQMSERR*AFQSEC Trigger: ACACTCACTCTGGAAGGCCCATCTCCTTTCTGACAT...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGGCCAACAGTCAGGGCTaGAAAGTTAGCTGTCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGANSQG*KVSCPL Trigger: CAGTGGACAGCTAACTTTCCAGCCCTGACTGTTGGC...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCATGCATTTGGTATCTTaGTTTTTCAACTCCTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EGMARLSPPNVTLSWSPFMHLVS*FFNSSH Trigger: GTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCAT...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGAGGTCTAAAAGGGAATaGAGTTGGGTGGAAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WKVGILRKLYQLSCIPCPRSKRE*SWVEIS Trigger: TGAGATTTCCACCCAACTGCATTCCCTTTTAGACCT...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTTGCCAGAATCGATTCTaGTTTCTCAAAGGGGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FSFEIGFLCIALAVLGLTCQNRF*FLKGGN Trigger: ATTTCCCCCTTTGAGAAACCAGAATCGATTCTGGCA...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGTCTGCGACCTGGCTATaGATTTGGTATCTTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGSATWL*IWYLAF Trigger: AAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGA...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGTTGTTCCAAATTCATaGCAGTGTGAGGTATCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SCMGVLSICLCATYVSHVVVPNS*QCEVSQ Trigger: CTGGGATACCTCACACTGCCATGAATTTGGAACAAC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCAGATCCTCCAACTGTTaGTTCCCAAAGTATGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SCMGVLSICLCATYVSHVRSSNC*FPKYED Trigger: ATCCTCATACTTTGGGAAGCAACAGTTGGAGGATCT...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGAAAAGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGACCTGGCTATGCATTTaGTATCTTGCTTTTTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: VEKNGKFPNPDSISQMLGTWLCI*YLAFST Trigger: AGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGT...CCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCTTTTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCACAATATCTGCGACCTaGCTATGCATTTGGTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: SCMGVLSICLCATYVSHVTISAT*LCIWYL Trigger: AAGATACCAAATGCATAGCCAGGTCGCAGATATTGT...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | GAGGGACGGGTCGGTCTTGGTCAGGGTGGCGGCCCGTaGGCACCCAAGCGAAATCTGAAGCTTGGGGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGRVGLGQGGGP*APKRNLKLGAG Trigger: TCCCGCCCCAAGCTTCAGATTTCGCTTGGGTGCGCACGGGCCGCCACCCTGACCAAGACCGACCCGTCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | ACAGCGGAGGGGACAGGGTGGAAACACTGGAGACTATaGGGGATGGGTGGCACCCTCCCGGACCACCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAEGTGWKHWRL*GMGGTLPDHPA Trigger: GGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTCCCCTCCGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | ACGAGCGGGAAGATTCCCGGACCCACCCCAGTGCTGTaGAAAGGCTGGCTGAGCACAGGGCTCCACAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TSGKIPGPTPVL*KGWLSTGLHSH Trigger: GTGGCTGTGGAGCCCTGTGCTCAGCCAGCCTTTCCACAGCACTGGGGTGGGTCCGGGAATCTTCCCGCTCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | AGGGGACAGGGTGGAAACACTGGAGACTATGAGGGATaGGTGGCACCCTCCCGGACCACCCTGCCCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGQGGNTGDYEG*VAPSRTTLPWL Trigger: GAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTCCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GGCGCTGTGAGCTCAGCTCCACGGGGGTCCTTTATGTaGAGACCCACCCACCCACGGCAGAAACACTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAVSSAPRGSFM*RPTHPRQKHCL Trigger: CAGGCAGTGTTTCTGCCGTGGGTGGGTGGGTCTCCACATAAAGGACCCCCGTGGAGCTGAGCTCACAGCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GACAGGGTGGAAACACTGGAGACTATGAGGGATGGGTaGCACCCTCCCGGACCACCCTGCCCTGGCTCGATC | + |
|
Preference number: 3 (lower is better) Translates to: DRVETLETMRDG*HPPGPPCPGSI Trigger: GATCGAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCACCCATCCCTCATAGTCTCCAGTGTTTCCACCCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGAGGGACGGGTCGGTCTaGGTCAGGGTGGCGGCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: WKVGILRKLYQLSCIPCPRDGSV*VRVAAR Trigger: ACGGGCCGCCACCCTGACCAAGACCGACCCGTCCCT...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | ACCCACCAAGAAACCCAAATGCACCAGAGAGCCCGGTaGCAGACTCCTAAGCAGCGGGGCTCTAGGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: THQETQMHQRAR*QTPKQRGSRAP Trigger: AGGTGCCCTAGAGCCCCGCTGCTTAGGAGTCTGTCACCGGGCTCTCTGGTGCATTTGGGTTTCTTGGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | TGGCACCCTCCCGGACCACCCTGCCCTGGCTCGATCTaGAGCTCATGTCCAGAGAAGATTAAGAGGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: WHPPGPPCPGSI*SSCPEKIKRDR Trigger: TCTGTCCCTCTTAATCTTCTCTGGACATGAGCTTCAGATCGAGCCAGGGCAGGGTGGTCCGGGAGGGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | GGATGTCAGGTCCCCTGGGACCAGAGTCTTGTGAGCTaGCATCAGTTCCCCTGGAAGAGCAGCCAGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GCQVPWDQSLVS*HQFPWKSSQCC Trigger: ACAACACTGGCTGCTCTTCCAGGGGAACTGATGGCAGCTCACAAGACTCTGGTCCCAGGGGACCTGACATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GCCAGTTTAAAGGGGGTTGTTTGGGAACTCTGGTGGTaGTCACGCCTCCGTGGAGCTGGAGTAGGCAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASLKGVVWELWW*SRLRGAGVGKP Trigger: TGGCTTGCCTACTCCAGCTCCACGGAGGCGTGACCACCACCAGAGTTCCCAAACAACCCCCTTTAAACTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | CTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTaGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LWLSWDSLCRPG*PRNQKFACLCL Trigger: GAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | ATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTaGTCACCTTTCACAGGTCACTGGGGCTCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MARLSPPNVTLS*SPFTGHWGSSL Trigger: GAGGGAGGAGCCCCAGTGACCTGTGAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | CCCACGGCAGAAACACTGCCTGCTCCTAGTGTAGGGTaGTTACAGAGGCTGTGTGAAGAGGCTTGCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTAETLPAPSVG*LQRLCEEACRG Trigger: TCCTCTGCAAGCCTCTTCACACAGCCTCTGTAATCACCCTACACTAGGAGCAGGCAGTGTTTCTGCCGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | AGGACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCCACCGCTGGAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTFGRAVSALNH*AISPAPTAGVL Trigger: AAGAACTCCAGCGGTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | AAAGCCAGTTTAAAGGGGGTTGTTTGGGAACTCTGGTaGTGGTCACGCCTCCGTGGAGCTGGAGTAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KASLKGVVWELW*WSRLRGAGVGK Trigger: CTTGCCTACTCCAGCTCCACGGAGGCGTGACCACCACCAGAGTTCCCAAACAACCCCCTTTAAACTGGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | AGAAAAGCCAGTTTAAAGGGGGTTGTTTGGGAACTCTaGTGGTGGTCACGCCTCCGTGGAGCTGGAGTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RKASLKGVVWEL*WWSRLRGAGVG Trigger: GCCTACTCCAGCTCCACGGAGGCGTGACCACCACCAGAGTTCCCAAACAACCCCCTTTAAACTGGCTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | TTACAGAGGCTGTGTGAAGAGGCTTGCAGAGGATGTTaGGCCCTTTTTACAGGACGAGCGGGAAGATTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LQRLCEEACRGC*ALFTGRAGRFP Trigger: CGGGAATCTTCCCGCTCGTCCTGTAAAAAGGGCCCAACATCCTCTGCAAGCCTCTTCACACAGCCTCTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | ACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTaGGCCCCAAGGTCATGTCTATACTACAAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: THPAPSSLPVSS*APRSCLYYKKG Trigger: TCCTTTCTTGTAGTATAGACATGACCTTGGGGCCCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | TCTCCCAGATGCTGGGGTAACGTGTGTGTGTCACCATaGAGTTCTGGGGATGGAAAGTGGGAATACTGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPRCWGNVCVSP*SSGDGKWEYCA Trigger: TGCGCAGTATTCCCACTTTCCATCCCCAGAACTCCATGGTGACACACACACGTTACCCCAGCATCTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | GCTTGTTTCTCCGTCTTTATTAAAGCTAGGTCCTCCTaGCCACAGCGGAGGGGACAGGGTGGAAACACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ACFSVFIKARSS*PQRRGQGGNTG Trigger: TCCAGTGTTTCCACCCTGTCCCCTCCGCTGTGGTCAGGAGGACCTAGCTTTAATAAAGACGGAGAAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR TCA 72 bp | GGGGGAAATGTCAGAAAGGAGATGGGCCTTCCAGAGTaGGTGTCGCTAATAGGCACCAAGGTGGGGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGNVRKEMGLPE*VSLIGTKVGQK Trigger: TTTTTGCCCCACCTTGGTGCCTATTAGCGACACTCACTCTGGAAGGCCCATCTCCTTTCTGACATTTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTaGGGTAACGTGTGTGTGTCACCATGGAGTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VNSPILTPSPRC*GNVCVSPWSSG Trigger: CCCAGAACTCCATGGTGACACACACACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTGGCTTGCAGAGGATGTaGGGCCCTTTTTACAGGACG | + |
|
Preference number: 3 (lower is better) Translates to: FSFEIGFLCIALAVLGLTGLQRM*GPFYRT Trigger: CGTCCTGTAAAAAGGGCCCAACATCCTCTGCAAGCC...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | GATAGCAATACCAAAGTCCATGTGGTGGCCAGCGCTTaGCAGACCTGTTTAGAGGTTGGAGTGAGGATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DSNTKVHVVASA*QTCLEVGVRIS Trigger: GGAAATCCTCACTCCAACCTCTAAACAGGTCTGGCAAGCGCTGGCCACCACATGGACTTTGGTATTGCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCGACCTGGCTATGCATTaGGTATCTTGCTTTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGDLAMH*VSCFFN Trigger: GTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTC...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | ATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATaGTGGGGTAACGTGTGTGTGTCACCATGGAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MVNSPILTPSPR*WGNVCVSPWSS Trigger: AGAACTCCATGGTGACACACACACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | CAAATTCATGGCAGTGTGAGGTATCCCAGTAAGATGTaGTGGACACAGGCCCAATCCATGATGCCAGAATCG | + |
|
Preference number: 3 (lower is better) Translates to: QIHGSVRYPSKM*WTQAQSMMPES Trigger: CGATTCTGGCATCATGGATTGGGCCTGTGTCCACCACATCTTACTGGGATACCTCACACTGCCATGAATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCATGCGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACCATCTGTAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | CCTCTATCTTCCCCAAAACCTACTGAGGTTCCTGCCTaGCTTGAACTAGGTTCTGAACACTTACTGGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLSSPKPTEVPA*LELGSEHLLDS Trigger: TGAGTCCAGTAAGTGTTCAGAACCTAGTTCAAGGCAGGCAGGAACCTCAGTAGGTTTTGGGGAAGATAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | GCATCAGATCTCATTACAGATGGTTGTGAGCCACCATaGGGTTGCTGGGATTTGAACTCAGGACCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASDLITDGCEPP*GCWDLNSGPLE Trigger: TTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCGCATGGTGGCTCACAACCATCTGTAATGAGATCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GGGTCCTGGACAATATCTGCGACCTGGCTATGCATTTaGTATCTTGCTTTTTCAACTCCTCCCACACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSWTISATWLCI*YLAFSTPPTLF Trigger: GAAGAGTGTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTCCAGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | TCCAACTCCCCAGGGTCCTGGACAATATCTGCGACCTaGCTATGCATTTGGTATCTTGCTTTTTCAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SNSPGSWTISAT*LCIWYLAFSTP Trigger: AGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTCCAGGACCCTGGGGAGTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | ATTCATGGCAGTGTGAGGTATCCCAGTAAGATGTGGTaGACACAGGCCCAATCCATGATGCCAGAATCGATT | + |
|
Preference number: 3 (lower is better) Translates to: IHGSVRYPSKMW*TQAQSMMPESI Trigger: AATCGATTCTGGCATCATGGATTGGGCCTGTGTCCACCACATCTTACTGGGATACCTCACACTGCCATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | AACGTCACCCTTAGTTGGTCACCTTTCACAGGTCACTaGGGCTCCTCCCTCCTTGGTAATGAAGAGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: NVTLSWSPFTGH*GSSLLGNEENF Trigger: AAAATTCTCTTCATTACCAAGGAGGGAGGAGCCCCAGTGACCTGTGAAAGGTGACCAACTAAGGGTGACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | TTTCCAAAGAATAAGGCTTCCAACTCCCCAGGGTCCTaGACAATATCTGCGACCTGGCTATGCATTTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FPKNKASNSPGS*TISATWLCIWY Trigger: ATACCAAATGCATAGCCAGGTCGCAGATATTGTCCAGGACCCTGGGGAGTTGGAAGCCTTATTCTTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | AGAAAGGATCTAGGTCTAAAAGGGAATGCAGTTGGGTaGAAATCTCACTTCTCTAGTCCCCAGTCACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKDLGLKGNAVG*KSHFSSPQSHW Trigger: CCAGTGTGACTGGGGACTAGAGAAGTGAGATTTCCACCCAACTGCATTCCCTTTTAGACCTAGATCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GCTGCAGTCAATGGTGACCTTTATCACCGGATTACTTaGCCTTTCAGTACACTAAGATCTGTGGTCACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AAVNGDLYHRIT*PFSTLRSVVTH Trigger: ATGGGTGACCACAGATCTTAGTGTACTGAAAGGCCAAGTAATCCGGTGATAAAGGTCACCATTGACTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR GCA 72 bp | GACAATATCTGCGACCTGGCTATGCATTTGGTATCTTaGTTTTTCAACTCCTCCCACACTCTTCGGGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: DNICDLAMHLVS*FFNSSHTLRVI Trigger: TATGACCCGAAGAGTGTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCAAAGATGTCCACGTGTGCTACTTACAGCCACTAGAGAACAAACTGAGATATGCATTTGGTATCTaGCTTTTTCAACTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPKDVHVCYLQPLENKLRYAFGI*LFQLLP Trigger: TGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATA...TCTCAGTTTGTTCTCTAGTGGCTGTAAGTAGCACACGTGGACATCTTTGGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | GTTATTTTTGAGGTAGGGTCTCTATGTAGCCAAGGCTaGCCTCAAACCCAGGGAGTTGAAAAGAATGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIFEVGSLCSQG*PQTQGVEKNGK Trigger: TTTACCATTCTTTTCAACTCCCTGGGTTTGAGGCCAGCCTTGGCTACATAGAGACCCTACCTCAAAAATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CCA 72 bp | CAGGGGGATGAAGGTGAACTTGATGTCTCATACTGCTaGAGCTCCTTGGGTTTTGTTTCTTTAAGATTTATT | + |
|
Preference number: 3 (lower is better) Translates to: QGDEGELDVSYC*SSLGFVSLRFI Trigger: AATAAATCTTAAAGAAACAAAACCCAAGGAGCTCCAGCAGTATGAGACATCAAGTTCACCTTCATCCCCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | CCGCCCCTGCACCACAGATCGAGGGACGGGTCGGTCTaGGTCAGGGTGGCGGCCCGTGCGCACCCAAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPLHHRSRDGSV*VRVAARAHPSE Trigger: TTCGCTTGGGTGCGCACGGGCCGCCACCCTGACCAAGACCGACCCGTCCCTCGATCTGTGGTGCAGGGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGGGCGGGAGAGACCCGAGCACCCAAGAGTGGGAATCCTCAGCCCGCCAGTGTGCGTGCGCTGGTaGGTCACGAGCACCGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGRERPEHPRVGILSPPVCVRW*VTSTDR Trigger: GCGATCGGTGCTCGTGACGCACCAGCGCACGCACAC...TGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCTCCCGCCCCAAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACCCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTGGTCGGCGTGTGCCCACTaGTGCCGCGTGAGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SHPWTTHPAPSSLPVSSWSACAH*CRVSAA Trigger: CGCCGCGCTCACGCGGCACCAGTGGGCACACGCCGA...CCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGGGCGGGAGAGACCCGAGCACCCAAGAGTGGGAATCCTCAGCCCGCCAGCGCTGAGCTCTGGCTaGAGCTACGGCCGCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLGRERPEHPRVGILSPPALSSG*SYGRSV Trigger: TACACTGCGGCCGTAGCTTCAGCCAGAGCTCAGCGC...TGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCTCCCGCCCCAAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACTGTAAGGGGCCTTGCATAGTAAGGCGCTGTGAGCTCAGCTCCACGGGGCAGGCGCCTGGGCCTTaGTGGAGGAGGTGTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHCKGPCIVRRCELSSTGQAPGP*WRRCAP Trigger: CGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTG...CCCCGTGGAGCTGAGCTCACAGCGCCTTACTATGCAAGGCCCCTTACAGTGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCCCCACTGGTGCCGCGTaGGCGCGGCGCTCTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGMARLSPPNVTLSWSPFPTGAA*ARRSGR Trigger: TCGGCCAGAGCGCCGCGCTCACGCGGCACCAGTGGG...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGCCGCCACTGCGCCGGTaGCGCTGGAAGTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WKVGILRKLYQLSCIPCPPPLRR*RWKSAR Trigger: GCGCGCCGACTTCCAGCGTCACCGGCGCAGTGGCGG...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCGTGTGGCCGCGCACGTaGGCCGCTAGGTGCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGVWPRT*AARCEP Trigger: CGGCTCGCACCTAGCGGCGCACGTGCGCGGCCACAC...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCCTTCTCCTCGGCGTGTaGCCACTGGTGCCGCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTALLLGV*PLVPRE Trigger: CTCACGCGGCACCAGTGGGCACACGCCGAGGAGAAG...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCGCGCCTGGGCCTTGGTaGAGGAGGTGTGCGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGMARLSPPNVTLSWSPFAPGPW*RRCAPA Trigger: CGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGC...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | TCCCACCCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTGGGGATGCGCCGGTGCGTaGCCAGGTGCGACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHPWTTHPAPSSLPVSSWGCAGA*PGATCR Trigger: TCTACAAGTCGCACCTGGTCACGCACCGGCGCATCC...CCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACCCGAGCACCCAAGAGTGGGAATCCTCAGCCCGCCAAAGAGCTGGAGGAGCGTCTTCATGTGCGTaGGGAGGTGCGAGCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RDPSTQEWESSARQRAGGASSCA*GGASSA Trigger: CGCAGAGCTCGCACCTCCTCACGCACATGAAGACGC...TCCTCCAGCTCTTTGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTAGGATTGAGGTTGGAGCGCTGTaGGAACCCGCGGCCGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWPRNQKFACLCLPSARIEVGAL*EPAAAV Trigger: GACTGCGGCCGCGGGTTCGCACAGCGCTCCAACCTC...AATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCACGAGCACCGATCGCTaGGAGAAACGCTTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTATSTDR*EKRLPH Trigger: GTGCGGCAAGCGTTTCTCTCAGCGATCGGTGCTCGT...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCCTCCAGCTGGGTAGCTaGGGAGTCTGGAGCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTALQLGS*GVWSTL Trigger: CAGAGTGCTCCAGACTCCCCAGCTACCCAGCTGGAG...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATGGCCAGGCTCAGTCCTCCAAACGTCACCCTTAGTTGGTCACCTTTCGTGTGCACAGCCTGGTaGCGGGCGAGCGCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGMARLSPPNVTLSWSPFVCTAW*RASAEL Trigger: GAGCTCAGCGCTCGCCCGCCACCAGGCTGTGCACAC...GAAAGGTGACCAACTAAGGGTGACGTTTGGAGGACTGAGCCTGGCCATTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGCGGTGTGCACAGCCTaGTGGCGGGCGAGCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQAVCTA*WRASAE Trigger: CTCAGCGCTCGCCCGCCACCAGGCTGTGCACACCGC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCGATCGGAGCCGAAGCTaGTTCCTCCCGCGAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTADRSRS*FLPRTR Trigger: TCGAGTTCGCGGGAGGAACCAGCTTCGGCTCCGATC...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCCCTAAGCTCAGAGTCTaGTCCTCTGCCAGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTAPKLRV*SSARTS Trigger: GGAGGTCCTGGCAGAGGAGCAGACTCTGAGCTTAGG...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAGTGGGAATACTGCGCAAACTGTACCAACTGAGCTGTATCCCCTGCCCGCGGTGGCGCGCCAGGTaGGAGCCGTACACGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKVGILRKLYQLSCIPCPRWRAR*EPYTKL Trigger: GAGCTTCGTGTACGGCTCGCACCTGGCGCGCCACCG...CGGGCAGGGGATACAGCTCAGTTGGTACAGTTTGCGCAGTATTCCCACTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCCGTGCGCCGTGAGGTaGGCGCGCCGGCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMVNSPILTPSPRCWGNVPCAVR*ARRLKP Trigger: AGGCTTCAGCCGGCGCGCGCACCTCACGGCGCACGG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGCTCCCCCGTGTGCGTaGGCTGGTGCGTCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQAPPCA*AGASRA Trigger: TGCTCGTGACGCACCAGCGCACGCACACGGGGGAGC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGAACCGGATCCGTGATGAACTAATAGGCCTTGCCCGCCATCCCACCGCCAGCCACTGCGGGAAATaGCCAGGGCACCAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLNRIRDELIGLARHPTASHCGK*PGHQKV Trigger: AACTTTCTGGTGCCCTGGGCATTTCCCGCAGTGGCT...GGCGGTGGGATGGCGGGCAAGGCCTATTAGTTCATCACGGATCCGGTTCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTAGGATTGAAGGGCTTGACCGCTaGGTGGTAGCGCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWPRNQKFACLCLPSARIEGLDR*VVALVL Trigger: AAGCACCAGCGCTACCACGCAGCGGTCAAGCCCTTC...AATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGCCAACCCCATGCCTTaGAGGGAAAGCGGGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQANPMP*RESGEP Trigger: GGGCTCCCCGCTTTCCCTGCAAGGCATGGGGTTGGC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTACGTGCGCCGCTAGGTaGGAGCCGCGGGCGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTTCAAR*EPRAKR Trigger: TCGCTTCGCCCGCGGCTCGCACCTAGCGGCGCACGT...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGGGCGGGAGAGACCCGAGCACCCAAGAGTGGGAATCCTCAGCCCGCCATCATCTTCCTCCTCGTaGTCCTCTATGTCATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGRERPEHPRVGILSPPSSSSS*SSMSSF Trigger: GAACGATGACATAGAGGACCACGAGGAGGAAGATGA...TGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCTCCCGCCCCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCTGGTGGATGGCCAGGTaGGAGCGGTACACAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGWWMAR*ERYTKP Trigger: GGGCTTTGTGTACCGCTCGCACCTGGCCATCCACCA...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CACCCCAAAGATGTCCACGTGTGCTACTTACAGCCACTAGAGAACAAACTGAGAGTGTGGCCGCGCCGGTaGTTGGCGAGGTTGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HPKDVHVCYLQPLENKLRVWPRR*LARLER Trigger: GCGCTCCAACCTCGCCAAGCACCGGCGCGGCCACAC...TCTCAGTTTGTTCTCTAGTGGCTGTAAGTAGCACACGTGGACATCTTTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCTCTGCTGGCTCCAGCTaGGTAGCTGGGGAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGSAGSS*VAGESG Trigger: TCCAGACTCCCCAGCTACCCAGCTGGAGCCAGCAGA...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGCGGTACAGATCCCGCTaGTCCACACCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQRYRSR*STPSLS Trigger: GGAGAGGCTGGGTGTGGACCAGCGGGATCTGTACCG...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | GAGCTGCCATCAGTTCCCCTGGAAGAGCAGCCAGTGTaGTTGACTGCTGAGCCCTCTCTGCTGCCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELPSVPLEEQPV*LTAEPSLLPTV Trigger: AACAGTGGGCAGCAGAGAGGGCTCAGCAGTCAACAACACTGGCTGCTCTTCCAGGGGAACTGATGGCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACCCGAGCACCCAAGAGTGGGAATCCTCAGCCCGCCAAAGAGCTGGAGGATGTAGGGCTTTTCCTTaGAGAACTGGTGCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDPSTQEWESSARQRAGGCRAFP*RTGALA Trigger: TGCCAAGGCACCAGTTCTTCAAGGAAAAGCCCTACA...TCCTCCAGCTCTTTGGCGGGCTGAGGATTCCCACTCTTGGGTGCTCGGGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGCGCAGCCGAAGGGCTTaGCCGCTGCGTGGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGRSRRA*PLRGSA Trigger: AGCGCTACCACGCAGCGGTCAAGCCCTTCGGCTGCG...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCCAACCCTCTGGAGTCTaGACCGAATCCGAGTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGQPSGV*TESESS Trigger: CGACGACTCGGATTCGGTGCAGACTCCAGAGGGTTG...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGGGACGATCAGCGGTGTaGACAGCCTGGTGGCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGGRSAV*TAWWRA Trigger: CGCCCGCCACCAGGCTGTGCACACCGCTGATCGTCC...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGGGAAACCGTCCGGATaGAGCCAGGACTTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQGKPSG*SQDLGC Trigger: GCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTAGGATTTTGCTATGCCGCTCCTaGGTCCCTAAGCTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWPRNQKFACLCLPSARILLCRS*VPKLRV Trigger: GACTCTGAGCTTAGGGACCCAGGAGCGGCATAGCAA...AATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGATACCGAGACTGCCTaGGTTGGGTCCCCAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQDTETA*VGSPTL Trigger: GAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | CTGCCATCAGTTCCCCTGGAAGAGCAGCCAGTGTTGTaGACTGCTGAGCCCTCTCTGCTGCCCACTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVPLEEQPVL*TAEPSLLPTVV Trigger: AACAACAGTGGGCAGCAGAGAGGGCTCAGCAGTCAACAACACTGGCTGCTCTTCCAGGGGAACTGATGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTTGCGTCGGTGTCGCTTaGAGTCCGAGCTGTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTCVGVA*SPSCGR Trigger: TCGGCCACAGCTCGGACTTCAAGCGACACCGACGCA...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTTGTAGACGAAGCGCTTaGCGCAGTCCGGGCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTCRRSA*RSPGTG Trigger: TCCCGTGCCCGGACTGCGGCAAGCGCTTCGTCTACA...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCCACTGCTGGGTTCCGTaGAGCCGCCACTGCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCMGVLSICLCATYVSHVHCWVP*SRHCAG Trigger: ACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTG...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGCCTTGGCAGGCGCCTaGGCCTTGGTGGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCMGVLSICLCATYVSHVALAGA*ALVEEV Trigger: CACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCAGAGTCTGCTCCTCTaGCAGGACCTCCTCCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: RMVNSPILTPSPRCWGNVQSLLL*QDLLHV Trigger: GACGTGGAGGAGGTCCTGGCAGAGGAGCAGACTCTG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTATGTGCGTGAGGAGGTaGGAGCTCTGCGAGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTMCVRR*ELCEKR Trigger: GCGCTTCTCGCAGAGCTCGCACCTCCTCACGCACAT...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCGGTGCGTCTTCATGTaGGTGAGGAGGTGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RMVNSPILTPSPRCWGNVRCVFM*VRRCEL Trigger: GAGCTCGCACCTCCTCACGCACATGAAGACGCACCG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGTATGGGTGCGCTGGTaGATGGCCAGGTGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SCMGVLSICLCATYVSHVVWVRW*MARCER Trigger: CCGCTCGCACCTGGCCATCCACCAGCGCACCCATAC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGGATGCAGCCAGGACTTaGGATGCATGGGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQDAART*DAWGSG Trigger: TCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATC...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGCCAGGCGGGAACGGTaGGGAAACACTTTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCMGVLSICLCATYVSHVARRER*GNTLPH Trigger: GTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGGC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTTTTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTTCTGCCACCTCCTaGACCGGTGTGGCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVFLLRDRVSLYSSGCPGTSATS*TGVATS Trigger: AGAAGTGGCCACACCGGTGCAGGAGGTGGCAGAAGT...CCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAAAAACTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTTTCCACCTCTACTTCTaGCACCTCCTGCACCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTFHLYF*HLLHRC Trigger: ACACCGGTGCAGGAGGTGGCAGAAGTAGAGGTGGAA...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTGTTCAGGGTCCTTCTTaGTGTCGGGGACAGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTVQGPS*CRGQSL Trigger: AAGCGACTGTCCCCGACAGCAAGAAGGACCCTGAAC...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTAGGACTTGGGATGCATaGGGAAGTGGAAGCCGAACG | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTRTWDA*GSGSRT Trigger: CGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCT...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | GGAAGGTTAGCTAGTCACAGCCACGCCCCATGTGTGTaGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRLASHSHAPCV*FQIHGSVRYPS Trigger: ACTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTGTGACTAGCTAACCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR TCA 90 bp | GTTGAAAAGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTCCACCATTGTCTGCTaGGTTGGCTTCCACCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VEKNGKFPNPDSISQMLGSTIVC*VGFHLY Trigger: GTAGAGGTGGAAGCCAACTCAGCAGACAATGGTGGA...CCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCTTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | GTTGAAAAGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGCCCTGGGTCAGGAAATaGTCCTCATCTTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEKNGKFPNPDSISQMLGPWVRK*SSSSSS Trigger: GGAAGAGGAAGATGAGGAGCATTTCCTGACCCAGGG...CCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCTTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTGAAGAACTGGTGCCTTaGCATGACCACCATTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTEELVP*HDHHCY Trigger: ATAGCAATGGTGGTCATGCCAAGGCACCAGTTCTTC...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTCGAGATAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTGTGGAAGATCAGATCTaGCTTAGGGATTGGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFEIGFLCIALAVLGLTVEDQI*LRDWVS Trigger: GGATACCCAATCCCTAAGCCAGATCTGATCTTCCAC...AGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAACCCTATCTCGAAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR GCA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCTCCTTGAAGAACTGGTaGCTTGGCATGACCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCMGVLSICLCATYVSHVSLKNW*LGMTTI Trigger: AATGGTGGTCATGCCAAGGCACCAGTTCTTCAAGGA...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | GGACAATATCTGCGACCTGGCTATGCATTTGGTATCTaGCTTTTTCAACTCCTCCCACACTCTTCGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQYLRPGYAFGI*LFQLLPHSSGH Trigger: ATGACCCGAAGAGTGTGGGAGGAGTTGAAAAAGCAAGATACCAAATGCATAGCCAGGTCGCAGATATTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| 3UTR CAA 72 bp | GAAGGTGAACTTGATGTCTCATACTGCTGGAGCTCCTaGGGTTTTGTTTCTTTAAGATTTATTTATGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGELDVSYCWSS*GFVSLRFIYVS Trigger: ACTCACATAAATAAATCTTAAAGAAACAAAACCCAAGGAGCTCCAGCAGTATGAGACATCAAGTTCACCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GTGGGGGCAGAGGCGGCGTGGCCTTGGCAGGCGCCTGGGCCTTGGTaGAGGAGGTGTGCGCCGGCGCGCTCCCCGGCCCGCGGTGCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGAEAAWPWQAPGPW*RRCAPARSPARGAS Trigger: AGACGCACCGCGGGCCGGGGAGCGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | GGCGGCGTGGCCTTGGCAGGCGCCTGGGCCTTGGTGGAGGAGGTGTaGGCCGGCGCGCTCCCCGGCCCGCGGTGCGTCTTCATGTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGVALAGAWALVEEV*AGALPGPRCVFMCV Trigger: CACGCACATGAAGACGCACCGCGGGCCGGGGAGCGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CGAGCAGCGTTCCGGAGCCCGAGCCCGGTGGGGGCAGAGGCGGCGTaGCCTTGGCAGGCGCCTGGGCCTTGGTGGAGGAGGTGTGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAAFRSPSPVGAEAA*PWQAPGPWWRRCAP Trigger: CGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCACCGGGCTCGGGCTCCGGAACGCTGCTCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | CCATCCGCGCGCCATCGCCACTGCTGGGTTCCGTGCAGCCGCCACTaGGCCGGTGACGCTGGAAGTCGGCGCGCAGGCGGAAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSARHRHCWVPCSRH*AGDAGSRRAGGRPG Trigger: GCCAGGCCTTCCGCCTGCGCGCCGACTTCCAGCGTCACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTGGCGATGGCGCGCGGATGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | AGCTGCCGGAGGGCCCGGCGAACGCGGCAGGATCGGAGCCGAAGCTaGTTCCTCCCGCGAACTCGAGCAGCGTTCCGGAGCCCGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SCRRARRTRQDRSRS*FLPRTRAAFRSPSP Trigger: CGGGCTCGGGCTCCGGAACGCTGCTCGAGTTCGCGGGAGGAACCAGCTTCGGCTCCGATCCTGCCGCGTTCGCCGGGCCCTCCGGCAGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CCATCCCCACCTCGTGGGGAGCCATCCGCGCGCCATCGCCACTGCTaGGTTCCGTGCAGCCGCCACTGCGCCGGTGACGCTGGAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPRGEPSARHRHC*VPCSRHCAGDAGSR Trigger: CCGACTTCCAGCGTCACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTGGCGATGGCGCGCGGATGGCTCCCCACGAGGTGGGGATGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CAGGTTCCACCGTGGCTACAGCCGCGACTGCCATCTCCACCTCATTaGGAGCCATCCCCACCTCGTGGGGAGCCATCCGCGCGCCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: QVPPWLQPRLPSPPH*EPSPPRGEPSARHR Trigger: GCGATGGCGCGCGGATGGCTCCCCACGAGGTGGGGATGGCTCCCAATGAGGTGGAGATGGCAGTCGCGGCTGTAGCCACGGTGGAACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CAGTCGCTTCTGCCGCCGGAGCGACCACCACCTGCTCGTCCTGTCTaGCTTCAGCCTCGGTGTCTCCATCTGCCACACCAGCCTCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSLLPPERPPPARPV*LQPRCLHLPHQPRA Trigger: AGCCCGAGGCTGGTGTGGCAGATGGAGACACCGAGGCTGAAGCCAGACAGGACGAGCAGGTGGTGGTCGCTCCGGCGGCAGAAGCGACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCATGGACTACCCACCCAGCACCTAGCAGCCTGCCTGTTAGCTCTTGGAGAGGCGGCGTGGCCTaGGCAGGCGCCTGGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHPWTTHPAPSSLPVSSWRGGVA*AGAWAL Trigger: CAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCT...CCAAGAGCTAACAGGCAGGCTGCTAGGTGCTGGGTGGGTAGTCCATGGGTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | TTGCTGTCGGGGACAGTCGCTTCTGCCGCCGGAGCGACCACCACCTaGTCGTCCTGTCTGGCTTCAGCCTCGGTGTCTCCATCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSGTVASAAGATTT*SSCLASASVSPSAT Trigger: TGTGGCAGATGGAGACACCGAGGCTGAAGCCAGACAGGACGAGCAGGTGGTGGTCGCTCCGGCGGCAGAAGCGACTGTCCCCGACAGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GGGAAACCGTCCGGATGCAGCCAGGACTTGGGATGCATGGGGAAGTaGAAGCCGAACGGATGCGAGGAAGGCCCTTCGCCCTCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKPSGCSQDLGCMGK*KPNGCEEGPSPSAR Trigger: CCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | GTCCACTGTAAGGGGCCTTGCATAGTAAGGCGCTGTGAGCTCAGCTCCACGGGGCGGTGCTTGGCGAGGTaGGAGCGCTGTGCGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: VHCKGPCIVRRCELSSTGRCLAR*ERCANP Trigger: CGGGTTCGCACAGCGCTCCAACCTCGCCAAGCACCG...CCCCGTGGAGCTGAGCTCACAGCGCCTTACTATGCAAGGCCCCTTACAGTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | TGCAGCCAGGACTTGGGATGCATGGGGAAGTGGAAGCCGAACGGATaGGAGGAAGGCCCTTCGCCCTCAGCCAGGCCGTTGCCCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSQDLGCMGKWKPNG*EEGPSPSARPLPIS Trigger: TGAGATGGGCAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CCAGGCGGGAACGGTGCGGAAACACTTTGCCGCACACATCGCAAGTaGTCTCCGGACATCCGATGGGGACAGCCACTGCGGGAAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGNGAETLCRTHRK*SPDIRWGQPLREMP Trigger: GGGCATTTCCCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS TCA 90 bp | CTGCTGCTCCTCCTCCTCCTCCTCCTCGGGGTCAGCATCACATTCTaGCCCATCTTCTGCTGGCTCCAGCTGGGTAGCTGGGGAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLGVSITF*PIFCWLQLGSWGVW Trigger: CCAGACTCCCCAGCTACCCAGCTGGAGCCAGCAGAAGATGGGTCAGAATGTGATGCTGACCCCGAGGAGGAGGAGGAGGAGGAGCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | AGCCGAACGGATGCGAGGAAGGCCCTTCGCCCTCAGCCAGGCCGTTaGCCATCTCACGAAACCGTCTGTCTGGTTCAGGGTCCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTDARKALRPQPGR*PSHETVCLVQGPSC Trigger: GCAAGAAGGACCCTGAACCAGACAGACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | TTCGCCCTCAGCCAGGCCGTTGCCCATCTCACGAAACCGTCTGTCTaGTTCAGGGTCCTTCTTGCTGTCGGGGACAGTCGCTTCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FALSQAVAHLTKPSV*FRVLLAVGDSRFCR Trigger: GCGGCAGAAGCGACTGTCCCCGACAGCAAGAAGGACCCTGAACCAGACAGACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGGCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | CCAGAATGGGGAAACCGTCCGGATGCAGCCAGGACTTGGGATGCATaGGGAAGTGGAAGCCGAACGGATGCGAGGAAGGCCCTTCGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PEWGNRPDAARTWDA*GSGSRTDARKALRP Trigger: AGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCCCATTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GTTTTGCTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTTaGGTCCCCAACCCTCTGGAGTCTGCACCGAATCCGAGTCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLQPPPPGYRDCLG*VPNPLESAPNPSRR Trigger: CCGACGACTCGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCCTCGAAATCAGAAATTCGCCTGCCTCTGCCTCCCGAGTGCTAGGATTGTGCGTCGGTGTCGCTaGAAGTCCGAGCTGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GWPRNQKFACLCLPSARIVRRCR*KSELWP Trigger: CGGCCACAGCTCGGACTTCAAGCGACACCGACGCAC...AATCCTAGCACTCGGGAGGCAGAGGCAGGCGAATTTCTGATTTCGAGGCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GTCCATCGGCTTGCAGCCGTTCAGAGAACTCGGGAAACCCCAGAATaGGGAAACCGTCCGGATGCAGCCAGGACTTGGGATGCATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHRLAAVQRTRETPE*GNRPDAARTWDAWG Trigger: TCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCCCATTCTGGGGTTTCCCGAGTTCTCTGAACGGCTGCAAGCCGATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | CACCAGAAAGTTCTCCCCAGGCTCCCGGCCAGACAGGAAATGTTTTaGTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQKVLPRLPARQEMF*FNLLRQDTETAWVG Trigger: CCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCTGGCCGGGAGCCTGGGGAGAACTTTCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTCTGTATAGCTCTGGCTGTCCTGGGACTCACTCTGTAGACCAGGCTGGCCCCTCAGCCAGGCCGTaGCCCATCTCACGAAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLYSSGCPGTHSVDQAGPSARP*PISRNR Trigger: ACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGG...GCCAGCCTGGTCTACAGAGTGAGTCCCAGGACAGCCAGAGCTATACAGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | ACAGGAAATGTTTTGCTTCAACCTCCTCCGCCAGGATACCGAGACTaGCTGGGTTGGGTCCCCAACCCTCTGGAGTCTGCACCGAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGNVLLQPPPPGYRD*LGWVPNPLESAPNP Trigger: CGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GAAATGTTTTGCTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTaGGTTGGGTCCCCAACCCTCTGGAGTCTGCACCGAATCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EMFCFNLLRQDTETA*VGSPTLWSLHRIRV Trigger: GACTCGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | GAAACACTTTGCCGCACACATCGCAAGTGGTCTCCGGACATCCGATaGGGACAGCCACTGCGGGAAATGCCCAGGGCACCAGAAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETLCRTHRKWSPDIR*GQPLREMPRAPESS Trigger: AGAACTTTCTGGTGCCCTGGGCATTTCCCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGCAGGCGCCTGGGCCTaGGTGGAGGAGGTGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCMGVLSICLCATYVSHVAGAWA*VEEVCA Trigger: GGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | AGAATGGTAAATTCCCCAATCCTGACTCCATCTCCCAGATGCTGGGGTAACGTGCCGAGACTGCCTGGGTaGGGTCCCCAACCCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RMVNSPILTPSPRCWGNVPRLPG*GPQPSG Trigger: TCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGG...CACGTTACCCCAGCATCTGGGAGATGGAGTCAGGATTGGGGAATTTACCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS GCA 90 bp | GTAGGGCTTTTCCTTGAAGAACTGGTGCCTTGGCATGACCACCATTaGTATGCCGCTCCTGGGTCCCTAAGCTCAGAGTCTGCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGLFLEELVPWHDHH*YAAPGSLSSESAPL Trigger: CAGAGGAGCAGACTCTGAGCTTAGGGACCCAGGAGCGGCATAGCAATGGTGGTCATGCCAAGGCACCAGTTCTTCAAGGAAAAGCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 90 bp | ATACCCGGGAGGTCTGTAGGGCTTTTCCTTGAAGAACTGGTGCCTTaGCATGACCACCATTGCTATGCCGCTCCTGGGTCCCTAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IPGRSVGLFLEELVP*HDHHCYAAPGSLSS Trigger: TGAGCTTAGGGACCCAGGAGCGGCATAGCAATGGTGGTCATGCCAAGGCACCAGTTCTTCAAGGAAAAGCCCTACAGACCTCCCGGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS TCA 90 bp | ACCACCACCACCATCATCATCATCATCACCTCCACCATTGTCTGCTaGGTTGGCTTCCACCTCTACTTCTGCCACCTCCTGCACCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTTTIIIIITSTIVC*VGFHLYFCHLLHRC Trigger: ACACCGGTGCAGGAGGTGGCAGAAGTAGAGGTGGAAGCCAACTCAGCAGACAATGGTGGAGGTGATGATGATGATGATGGTGGTGGTGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCACGCCCCATGTGTGTTGTTCCAAATTCATGGCAGTGTGAGGTATCCCAGTCATCACCTCCACCATaGTCTGCTGAGTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPRPMCVVPNSWQCEVSQSSPPP*SAELAS Trigger: GGAAGCCAACTCAGCAGACAATGGTGGAGGTGATGA...CTGGGATACCTCACACTGCCATGAATTTGGAACAACACACATGGGGCGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS-3UTR CAA 90 bp | TCGTGTATGGGTGTTCTGTCTATATGTCTGTGTGCCACATACGTTTCCCATGTCGCCATCTCCACCTCATaGGGAGCCATCCCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCMGVLSICLCATYVSHVAISTS*GAIPTS Trigger: CGAGGTGGGGATGGCTCCCAATGAGGTGGAGATGGC...GACATGGGAAACGTATGTGGCACACAGACATATAGACAGAACACCCATACACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | GGCAGAGGCGGCGTGGCCTTGGCAGGCGCCTGGGCCTaGGTGGAGGAGGTGTGCGCCGGCGCGCTCCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGGVALAGAWA*VEEVCAGALPG Trigger: GCCGGGGAGCGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 90 bp | AGCGTTCCGGAGCCCGAGCCCGGTGGGGGCAGAGGCGGCGTGGCCTaGGCAGGCGCCTGGGCCTTGGTGGAGGAGGTGTGCGCCGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVPEPEPGGGRGGVA*AGAWALVEEVCAGA Trigger: CGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCACCGGGCTCGGGCTCCGGAACGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | GGTGGGGGCAGAGGCGGCGTGGCCTTGGCAGGCGCCTaGGCCTTGGTGGAGGAGGTGTGCGCCGGCGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGGRGGVALAGA*ALVEEVCAGAL Trigger: GAGCGCGCCGGCGCACACCTCCTCCACCAAGGCCCAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCACC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | CGCGAACTCGAGCAGCGTTCCGGAGCCCGAGCCCGGTaGGGGCAGAGGCGGCGTGGCCTTGGCAGGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RELEQRSGARAR*GQRRRGLGRRL Trigger: CAGGCGCCTGCCAAGGCCACGCCGCCTCTGCCCCCACCGGGCTCGGGCTCCGGAACGCTGCTCGAGTTCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS TCA 72 bp | CCACTGCTGGGTTCCGTGCAGCCGCCACTGCGCCGGTaGCGCTGGAAGTCGGCGCGCAGGCGGAAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLLGSVQPPLRR*RWKSARRRKAW Trigger: CCAGGCCTTCCGCCTGCGCGCCGACTTCCAGCGTCACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | CGCCATCGCCACTGCTGGGTTCCGTGCAGCCGCCACTaGGCCGGTGACGCTGGAAGTCGGCGCGCAGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RHRHCWVPCSRH*AGDAGSRRAGG Trigger: TCCGCCTGCGCGCCGACTTCCAGCGTCACCGGCGCAGTGGCGGCTGCACGGAACCCAGCAGTGGCGATGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GAGGAGGTGTGCGCCGGCGCGCTCCCCGGCCCGCGGTaGGTCTTCATGTGCGTGAGGAGGTGCGAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EEVCAGALPGPR*VFMCVRRCELC Trigger: GCAGAGCTCGCACCTCCTCACGCACATGAAGACGCACCGCGGGCCGGGGAGCGCGCCGGCGCACACCTCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | AGGGCCCGGCGAACGCGGCAGGATCGGAGCCGAAGCTaGTTCCTCCCGCGAACTCGAGCAGCGTTCCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RARRTRQDRSRS*FLPRTRAAFRS Trigger: GCTCCGGAACGCTGCTCGAGTTCGCGGGAGGAACCAGCTTCGGCTCCGATCCTGCCGCGTTCGCCGGGCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS TCA 72 bp | GCACAGCCTGGTGGCGGGCGAGCGCTGAGCTCTGGCTaGAGCTACGGCCGCAGTGTAGACATGGGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQPGGGRALSSG*SYGRSVDMGRA Trigger: GGCCCTACCCATGTCTACACTGCGGCCGTAGCTTCAGCCAGAGCTCAGCGCTCGCCCGCCACCAGGCTGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GGGACAGTCGCTTCTGCCGCCGGAGCGACCACCACCTaGTCGTCCTGTCTGGCTTCAGCCTCGGTGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTVASAAGATTT*SSCLASASVSP Trigger: TGGAGACACCGAGGCTGAAGCCAGACAGGACGAGCAGGTGGTGGTCGCTCCGGCGGCAGAAGCGACTGTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | TGCAGGGAAAGCGGGGAGCCCAGGGGACCGGGCAGATaGCGTCCATCGGCTTGCAGCCGTTCAGAGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: CRESGEPRGPGR*RPSACSRSENS Trigger: CGAGTTCTCTGAACGGCTGCAAGCCGATGGACGCCATCTGCCCGGTCCCCTGGGCTCCCCGCTTTCCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GACTTGGGATGCATGGGGAAGTGGAAGCCGAACGGATaGGAGGAAGGCCCTTCGCCCTCAGCCAGGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLGCMGKWKPNG*EEGPSPSARPL Trigger: CAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GAGCCCAGGGGACCGGGCAGATGGCGTCCATCGGCTTaGAGCCGTTCAGAGAACTCGGGAAACCCCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: EPRGPGRWRPSA*SRSENSGNPRM Trigger: CATTCTGGGGTTTCCCGAGTTCTCTGAACGGCTGCAAGCCGATGGACGCCATCTGCCCGGTCCCCTGGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | CAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTTaGGTCCCCAACCCTCTGGAGTCTGCACCGAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: QPPPPGYRDCLG*VPNPLESAPNP Trigger: CGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | TCCGGATGCAGCCAGGACTTGGGATGCATGGGGAAGTaGAAGCCGAACGGATGCGAGGAAGGCCCTTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGCSQDLGCMGK*KPNGCEEGPSP Trigger: GGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | GGAGCCCAGGGGACCGGGCAGATGGCGTCCATCGGCTaGCAGCCGTTCAGAGAACTCGGGAAACCCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GAQGTGQMASIG*QPFRELGKPQN Trigger: ATTCTGGGGTTTCCCGAGTTCTCTGAACGGCTGCAAGCCGATGGACGCCATCTGCCCGGTCCCCTGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GGTGCTTGGCCAGGCGGGAACGGTGCGGAAACACTTTaGCGCACACATCGCAAGTGGTCTCCGGACATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GAWPGGNGAETL*RTHRKWSPDIR Trigger: TCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGGCCAAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GATGCGAGGAAGGCCCTTCGCCCTCAGCCAGGCCGTTaGCCATCTCACGAAACCGTCTGTCTGGTTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: DARKALRPQPGR*PSHETVCLVQG Trigger: ACCCTGAACCAGACAGACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | TGCTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTaGGTTGGGTCCCCAACCCTCTGGAGTCTGCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: CFNLLRQDTETA*VGSPTLWSLHR Trigger: TCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | GGAAACCGTCCGGATGCAGCCAGGACTTGGGATGCATaGGGAAGTGGAAGCCGAACGGATGCGAGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GNRPDAARTWDA*GSGSRTDARKA Trigger: GGCCTTCCTCGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | TCAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTaGGGTCCCCAACCCTCTGGAGTCTGCACCGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: STSSARIPRLPG*GPQPSGVCTES Trigger: GGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | TGGTGCTTGGCCAGGCGGGAACGGTGCGGAAACACTTaGCCGCACACATCGCAAGTGGTCTCCGGACATCCG | + |
|
Preference number: 6 (lower is better) Translates to: WCLARRERCGNT*PHTSQVVSGHP Trigger: CGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGGCCAAGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 90 bp | AAGCCGAACGGATGCGAGGAAGGCCCTTCGCCCTCAGCCAGGCCGTaGCCCATCTCACGAAACCGTCTGTCTGGTTCAGGGTCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPNGCEEGPSPSARP*PISRNRLSGSGSFL Trigger: CAAGAAGGACCCTGAACCAGACAGACGGTTTCGTGAGATGGGCAACGGCCTGGCTGAGGGCGAAGGGCCTTCCTCGCATCCGTTCGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS TCA 72 bp | CTCCTCCTCCTCCTCCTCGGGGTCAGCATCACATTCTaGCCCATCTTCTGCTGGCTCCAGCTGGGTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLGVSITF*PIFCWLQLGSW Trigger: CCAGCTACCCAGCTGGAGCCAGCAGAAGATGGGTCAGAATGTGATGCTGACCCCGAGGAGGAGGAGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | TCTCACGAAACCGTCTGTCTGGTTCAGGGTCCTTCTTaGTGTCGGGGACAGTCGCTTCTGCCGCCGGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SHETVCLVQGPS*CRGQSLLPPER Trigger: TCGCTCCGGCGGCAGAAGCGACTGTCCCCGACAGCAAGAAGGACCCTGAACCAGACAGACGGTTTCGTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | AACGGTGCGGAAACACTTTGCCGCACACATCGCAAGTaGTCTCCGGACATCCGATGGGGACAGCCACTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NGAETLCRTHRK*SPDIRWGQPLR Trigger: CCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | CCAGAATGGGGAAACCGTCCGGATGCAGCCAGGACTTaGGATGCATGGGGAAGTGGAAGCCGAACGGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: PEWGNRPDAART*DAWGSGSRTDA Trigger: CGCATCCGTTCGGCTTCCACTTCCCCATGCATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCCCATTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 90 bp | TGTTTTGCTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTaGGGTCCCCAACCCTCTGGAGTCTGCACCGAATCCGAGTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CFASTSSARIPRLPG*GPQPSGVCTESESS Trigger: CGACGACTCGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 90 bp | GCACCAGAAAGTTCTCCCCAGGCTCCCGGCCAGACAGGAAATGTTTaGCTTCAACCTCCTCCGCCAGGATACCGAGACTGCCTGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: APESSPQAPGQTGNV*LQPPPPGYRDCLGW Trigger: CCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCTGGCCGGGAGCCTGGGGAGAACTTTCTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | TTGCTATGCCGCTCCTGGGTCCCTAAGCTCAGAGTCTaGTCCTCTGCCAGGACCTCCTCCACGTCATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LLCRSWVPKLRV*SSARTSSTSSS Trigger: TGATGATGACGTGGAGGAGGTCCTGGCAGAGGAGCAGACTCTGAGCTTAGGGACCCAGGAGCGGCATAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | CTTGCAGCCGTTCAGAGAACTCGGGAAACCCCAGAATaGGGAAACCGTCCGGATGCAGCCAGGACTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LAAVQRTRETPE*GNRPDAARTWD Trigger: ATCCCAAGTCCTGGCTGCATCCGGACGGTTTCCCCATTCTGGGGTTTCCCGAGTTCTCTGAACGGCTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | AGTTCTCCCCAGGCTCCCGGCCAGACAGGAAATGTTTaGCTTCAACCTCCTCCGCCAGGATACCGAGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSPQAPGQTGNV*LQPPPPGYRDC Trigger: GCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCTGGCCGGGAGCCTGGGGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | GCTGAGTTGGCTTCCACCTCTACTTCTGCCACCTCCTaGACCGGTGTGGCCACTTCTTCTACTACTACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AELASTSTSATS*TGVATSSTTTS Trigger: AGAGGTAGTAGTAGAAGAAGTGGCCACACCGGTGCAGGAGGTGGCAGAAGTAGAGGTGGAAGCCAACTCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CCA 72 bp | ACCTCAGCAAGGAAGTCCTCGTCATCTTCCTCCTCGTaGTCCTCTATGTCATCGTTCCAGAACCAGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSARKSSSSSSS*SSMSSFQNQAP Trigger: GGGAGCCTGGTTCTGGAACGATGACATAGAGGACCACGAGGAGGAAGATGACGAGGACTTCCTTGCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS GCA 72 bp | TTCCTTGAAGAACTGGTGCCTTGGCATGACCACCATTaGTATGCCGCTCCTGGGTCCCTAAGCTCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLEELVPWHDHH*YAAPGSLSSES Trigger: AGACTCTGAGCTTAGGGACCCAGGAGCGGCATAGCAATGGTGGTCATGCCAAGGCACCAGTTCTTCAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||
| CDS CAA 72 bp | CCACCACCACCATCATCATCATCATCACCTCCACCATaGTCTGCTGAGTTGGCTTCCACCTCTACTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPSSSSSPPP*SAELASTSTSA Trigger: GGCAGAAGTAGAGGTGGAAGCCAACTCAGCAGACAATGGTGGAGGTGATGATGATGATGATGGTGGTGGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051665.9 ENSMUST00000161448.8 |
||