Pregenerated sensors for ZFP300 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031079Ensembl transcript IDs: ENSMUST00000040667.13
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGATaGAAGGAAAGACCATCCATAGACTGCCCCACCCAGGAATCCATC | + |
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Preference number: 1 (lower is better) Translates to: NTQWKELQRQSSELR*KERPSIDCPTQESI Trigger: GATGGATTCCTGGGTGGGGCAGTCTATGGATGGTCTTTCCTTCCATCTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 90 bp | TGGAAAGAACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATaGTGGTACATTTACACAATGGGGTACTACTCAGCAATTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: WKEPRCPWTEECIQK*WYIYTMGYYSAIKN Trigger: GTTTTTAATTGCTGAGTAGTACCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGTTCTTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 90 bp | GAAGAAGGTAGACCAAAGTGTGGATTACTTTGCTTCTTCTTAGAATaGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: EEGRPKCGLLCFFLE*GTKYPMEGVTETKF Trigger: GAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCATTCTAAGAAGAAGCAAAGTAATCCACACTTTGGTCTACCTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 90 bp | AAAGAACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTaGTACATTTACACAATGGGGTACTACTCAGCAATTAAAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: KEPRCPWTEECIQKW*YIYTMGYYSAIKNN Trigger: ATTGTTTTTAATTGCTGAGTAGTACCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR GCA 90 bp | ACACATGAAACTCAAGAAGAAGGTAGACCAAAGTGTGGATTACTTTaGTTCTTCTTAGAATGGGGAACAAAATACCCAATGGAAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: THETQEEGRPKCGLL*FFLEWGTKYPMEGV Trigger: AACTCCTTCCATTGGGTATTTTGTTCCCCATTCTAAGAAGAAGCAAAGTAATCCACACTTTGGTCTACCTTCTTCTTGAGTTTCATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 90 bp | CCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATaGGGTACTACTCAGCAATTAAAAACAATGAATTCATCAAATTCC | + |
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Preference number: 1 (lower is better) Translates to: PGQRNAYRNGGTFTQ*GTTQQLKTMNSSNS Trigger: GGAATTTGATGAATTCATTGTTTTTAATTGCTGAGTAGTACCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGGCCAGGGCCAAGAAGTaGGAGTGGGTGGGTAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: WGTKYPMEGVTETKFRAKARAKK*EWVGSG Trigger: TCCGCTACCCACCCACTCCCACTTCTTGGCCCTGGC...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGGTAGCGGAGCAGGGTTaGGGAGGGTATAGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: WGTKYPMEGVTETKFRAKVAEQG*GGYRGL Trigger: AAGTCCCCTATACCCTCCCCAACCCTGCTCCGCTAC...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACTTGTTTTGTAGTCCATaGTCAGGGCTCAGTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHLFCSP*SGLSYP Trigger: TGGGTAACTGAGCCCTGACCATGGACTACAAAACAA...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGATATGTAGCAGAAGATaGCCTAGTCAGCCATCAATG | + |
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Preference number: 2 (lower is better) Translates to: CPWTEECIQKWWYIYTMGICSRR*PSQPSM Trigger: CATTGATGGCTGACTAGGCCATCTTCTGCTACATAT...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CAA 90 bp | AATGCCTGGTTTTCAGGCTGTGTCTTGAACACAGCTATTAACTACTaGCCATTTGCTCTCATTTTATTGGGCAGTCCCATTGGAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: NAWFSGCVLNTAINY*PFALILLGSPIGSS Trigger: GCTACTTCCAATGGGACTGCCCAATAAAATGAGAGCAAATGGCAAGTAGTTAATAGCTGTGTTCAAGACACAGCCTGAAAACCAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGGATGGAACAATAATATaGACTAACCAGTATCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: CPWTEECIQKWWYIYTMGDGTII*TNQYPQ Trigger: CTGGGGATACTGGTTAGTTCATATTATTGTTCCATC...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGGCACTCACTGATAAGTaGATATTAGCCCAGAATCTT | + |
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Preference number: 2 (lower is better) Translates to: CPWTEECIQKWWYIYTMGALTDK*ILAQNL Trigger: AAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGCTGGGGAGGAAACATTaGCATTATCAACTGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: CPWTEECIQKWWYIYTMGLGRKH*HYQLLL Trigger: TAATAACAGTTGATAATGTCAATGTTTCCTCCCCAG...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAAAGCACCCAAGGAGCTaGAGGACTCTGCAACCTTAT | + |
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Preference number: 2 (lower is better) Translates to: ALTDKWILAQNLRISKIQKHPRS*RTLQPY Trigger: ATAAGGTTGCAGAGTCCTTCAGCTCCTTGGGTGCTT...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAGCACAATTTCCCCTTaGCTTTTGCATTTCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHSTISP*LLHFHF Trigger: AAAATGGAAATGCAAAAGGCAAGGGGAAATTGTGCT...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAAGTGTGGATTACTTTaGTTCTTCTTAGAATGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHKCGLL*FFLEWG Trigger: TCCCCATTCTAAGAAGAAGCAAAGTAATCCACACTT...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | ACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGATGGAACTTCCCAGATCAGGCTaGGGAGGAAACATTGACATT | + |
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Preference number: 2 (lower is better) Translates to: TKYPMEGVTETKFRAKMELPRSG*GGNIDI Trigger: AATGTCAATGTTTCCTCCCCAGCCTGATCTGGGAAG...TTCCATCTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAACTAGCTGTCCTTGCATaGCAAGGAGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: ALTDKWILAQNLRISKIQLAVLA*QGEFKT Trigger: GGTCTTGAACTCTCCTTGCCATGCAAGGACAGCTAG...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGGCACTTAGGTGGCAATaGCATAAAATTACAACCATA | + |
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Preference number: 2 (lower is better) Translates to: CPWTEECIQKWWYIYTMGALRWQ*HKITTI Trigger: TATGGTTGTAATTTTATGCCATTGCCACCTAAGTGC...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGAGAAATGAACACTGGTaGATTTGTGCCAAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: RLCQCLANTEVDANSHLLRNEHW*ICAKNM Trigger: CATGTTTTTGGCACAAATTCACCAGTGTTCATTTCT...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGGTTCTTCTCTCAATATaGCTGGTGCTGATCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: WGTKYPMEGVTETKFRAKVLLSI*LVLIFK Trigger: CTTAAAGATCAGCACCAGCCATATTGAGAGAAGAAC...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CAA 90 bp | GTCTTGAACACAGCTATTAACTACTTGCCATTTGCTCTCATTTTATaGGGCAGTCCCATTGGAAGTAGCTATTCTCATGAAGTAGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VLNTAINYLPFALIL*GSPIGSSYSHEVVA Trigger: AGCAACTACTTCATGAGAATAGCTACTTCCAATGGGACTGCCCAATAAAATGAGAGCAAATGGCAAGTAGTTAATAGCTGTGTTCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGATGGAAGACAAGTGTGTCATATaGTTAGAAAAGCACCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TKYPMEGVTETKFRAKMEDKCVI*LEKHPS Trigger: GCTAGGGTGCTTTTCTAATCATATGACACACTTGTC...TTCCATCTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGTACCATGCTGGCTATTaGCAAAATTATGAATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: WGTKYPMEGVTETKFRAKYHAGY*QNYECG Trigger: ACCACATTCATAATTTTGTCAATAGCCAGCATGGTA...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGTATTTAAGACATTTGTaGCCTCTTCGGGGAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: WGTKYPMEGVTETKFRAKYLRHL*PLRGEL Trigger: TAATTCTCCCCGAAGAGGCCACAAATGTCTTAAATA...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR GCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAGTATATGGTGGTACATaGCTGTCATACCAGCACTTA | + |
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Preference number: 2 (lower is better) Translates to: ALTDKWILAQNLRISKIQVYGGT*LSYQHL Trigger: TAAGTGCTGGTATGACAGGCATGTACCACCATATAC...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | ACTCTAACATACTTCCATTCTAAGCCCCAACCTCCTATTATCTCTTTCATGATCGCATCTTATAGTCCTTaGAAGCTTATAGTCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLTYFHSKPQPPIISFMIASYSP*KLIVFP Trigger: TGGGAAGACTATAAGCTTCCAAGGACTATAAGATGC...GATCATGAAAGAGATAATAGGAGGTTGGGGCTTAGAATGGAAGTATGTTAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAATACCAGCACTTAGGTaGCAATGGCATAAAATTACA | + |
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Preference number: 2 (lower is better) Translates to: ALTDKWILAQNLRISKIQIPALR*QWHKIT Trigger: TGTAATTTTATGCCATTGCCACCTAAGTGCTGGTAT...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR GCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAAAACCCAGACACTATTaGATATGCCAACATGATTTT | + |
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Preference number: 2 (lower is better) Translates to: ALTDKWILAQNLRISKIQKPRHY*ICQHDF Trigger: AAAATCATGTTGGCATATGCAATAGTGTCTGGGTTT...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR GCA 72 bp | TCAGAGCTAAGATGGAAGGAAAGACCATCCATAGACTaGCCCACCCAGGAATCCATCCCGTACACAACCACC | + |
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Preference number: 3 (lower is better) Translates to: SELRWKERPSID*PTQESIPYTTT Trigger: GGTGGTTGTGTACGGGATGGATTCCTGGGTGGGGCAGTCTATGGATGGTCTTTCCTTCCATCTTAGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | AGGGCTTGTGTCTCTAGCAGCATATGTAGCAGAAGATaGCCTAGTCAGCCATCAATGGAAAGAGGGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: RACVSSSICSRR*PSQPSMERGAP Trigger: AGGGGCCCCTCTTTCCATTGATGGCTGACTAGGCCATCTTCTGCTACATATGCTGCTAGAGACACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | TGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGATaGAAGGAAAGACCATCCATAGACTGCCCCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: WKELQRQSSELR*KERPSIDCPTQ Trigger: CTGGGTGGGGCAGTCTATGGATGGTCTTTCCTTCCATCTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | CCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATaGTGGTACATTTACACAATGGGGTACTACTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PRCPWTEECIQK*WYIYTMGYYSA Trigger: TGCTGAGTAGTACCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR GCA 72 bp | AGTTGGAAAGAACCCAGATGTCCCTGGACAGAGGAATaGATACAGAAATGGTGGTACATTTACACAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: SWKEPRCPWTEE*IQKWWYIYTMG Trigger: CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGTTCTTTCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | TGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTaGATTGAACACAGGGCCCCCAATGGAGGAGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: WQIPKWMLIVIY*IEHRAPNGGGR Trigger: TCTACCTCCTCCATTGGGGGCCCTGTGTTCAATCCAATAAATGACTATTAGCATCCACTTCGGTATTTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CAA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGTATTGGGCAGTCCCATaGGAAGTAGCTATTCTCATG | + |
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Preference number: 3 (lower is better) Translates to: RLCQCLANTEVDANSHLLYWAVP*EVAILM Trigger: CATGAGAATAGCTACTTCCAATGGGACTGCCCAATA...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | TGGTACATGCCTGTCATACCAGCACTTAGGTGGCAATaGCATAAAATTACAACCATAAAGCAGCCTAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: WYMPVIPALRWQ*HKITTIKQPSL Trigger: TAGGCTAGGCTGCTTTATGGTTGTAATTTTATGCCATTGCCACCTAAGTGCTGGTATGACAGGCATGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CAA 90 bp | GACCTCCTCCTTAAGGTCAACTGGAATTTTCCATTATTTCACCCCAACCGGGATGCTGGGGAGGAAACATaGACATTATCAACTGTTATT | + |
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Preference number: 3 (lower is better) Translates to: DLLLKVNWNFPLFHPNRDAGEET*TLSTVI Trigger: AATAACAGTTGATAATGTCAATGTTTCCTCCCCAGC...ATCCCGGTTGGGGTGAAATAATGGAAAATTCCAGTTGACCTTAAGGAGGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CAA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGTTTGCTCTCATTTTATaGGGCAGTCCCATTGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: RLCQCLANTEVDANSHLLFALIL*GSPIGS Trigger: ACTTCCAATGGGACTGCCCAATAAAATGAGAGCAAA...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | AGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTaGTACATTTACACAATGGGGTACTACTCAGCAATT | + |
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Preference number: 3 (lower is better) Translates to: RCPWTEECIQKW*YIYTMGYYSAI Trigger: AATTGCTGAGTAGTACCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | CAGCTATTAACTACTTGCCATTTGCTCTCATTTTATTaGGCAGTCCCATTGGAAGTAGCTATTCTCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: QLLTTCHLLSFY*AVPLEVAILMK Trigger: CTTCATGAGAATAGCTACTTCCAATGGGACTGCCCAATAAAATGAGAGCAAATGGCAAGTAGTTAATAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR GCA 72 bp | ACTCAAGAAGAAGGTAGACCAAAGTGTGGATTACTTTaGTTCTTCTTAGAATGGGGAACAAAATACCCAATG | + |
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Preference number: 3 (lower is better) Translates to: TQEEGRPKCGLL*FFLEWGTKYPM Trigger: CATTGGGTATTTTGTTCCCCATTCTAAGAAGAAGCAAAGTAATCCACACTTTGGTCTACCTTCTTCTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR-3UTR CAA 90 bp | ACTCTAACATACTTCCATTCTAAGCCCCAACCTCCTATTATCTCTTTCATGATCTTAACTACTTGCCATTaGCTCTCATTTTATTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TLTYFHSKPQPPIISFMILTTCH*LSFYWA Trigger: TGCCCAATAAAATGAGAGCAAATGGCAAGTAGTTAA...GATCATGAAAGAGATAATAGGAGGTTGGGGCTTAGAATGGAAGTATGTTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CCA 72 bp | CCTATTTCTTTTACTCAGAATGTTCTTCTCTCAATATaGCTGGTGCTGATCTTTAAGGACAAGTGTGTCATA | + |
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Preference number: 3 (lower is better) Translates to: PISFTQNVLLSI*LVLIFKDKCVI Trigger: TATGACACACTTGTCCTTAAAGATCAGCACCAGCCATATTGAGAGAAGAACATTCTGAGTAAAAGAAATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | GACCTCCTCCTTAAGGTCAACTGGAATTTTCCATTATTTCACCCCAACCGGGATGGTGTGCTGTGTTGTTaGATGCTTCTCTGCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: DLLLKVNWNFPLFHPNRDGVLCC*MLLCIL Trigger: CAAGATGCAGAGAAGCATTCAACAACACAGCACACC...ATCCCGGTTGGGGTGAAATAATGGAAAATTCCAGTTGACCTTAAGGAGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | CCTTGCATGGCAAGGAGAGTTCAAGACCTCCTCCTTAAGGTCAACTGGAATTTTGTGTTGACTCCTCTCTaGAGGACTTGCCACATTCAT | + |
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Preference number: 4 (lower is better) Translates to: PCMARRVQDLLLKVNWNFVLTPL*RTCHIH Trigger: ATGAATGTGGCAAGTCCTTCAGAGAGGAGTCAACAC...AAAATTCCAGTTGACCTTAAGGAGGAGGTCTTGAACTCTCCTTGCCATGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGCTCTCTGATGTAACATaGGGTATGACTTCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLCQCLANTEVDANSHLLLSDVT*GMTSGR Trigger: TCTCCCGGAAGTCATACCTCATGTTACATCAGAGAG...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR GCA 90 bp | GACCTCCTCCTTAAGGTCAACTGGAATTTTCCATTATTTCACCCCAACCGGGATTGCTGTGTTGTTGAATaGTTCTCTGCATCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DLLLKVNWNFPLFHPNRDCCVVE*FSASCP Trigger: TGGGCAAGATGCAGAGAAGCATTCAACAACACAGCA...ATCCCGGTTGGGGTGAAATAATGGAAAATTCCAGTTGACCTTAAGGAGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACATGTATATGCAGTGTTaGCTCCTCTCTGAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHMYMQC*LLSEGL Trigger: AAGTCCTTCAGAGAGGAGTCAACACTGCATATACAT...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | CCTTGCATGGCAAGGAGAGTTCAAGACCTCCTCCTTAAGGTCAACTGGAATTTTGAGTTCTCTAATCCATaGGGAACTTTGATCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PCMARRVQDLLLKVNWNFEFSNP*GTLISG Trigger: TCCAGAGATCAAAGTTCCTCATGGATTAGAGAACTC...AAAATTCCAGTTGACCTTAAGGAGGAGGTCTTGAACTCTCCTTGCCATGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGAAGTTGTATTCAGCTTaGCCATCTTCTGTGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: CPWTEECIQKWWYIYTMGKLYSA*PSSVQL Trigger: AAGTTGCACAGAAGATGGTCAAGCTGAATACAACTT...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | CCTTGCATGGCAAGGAGAGTTCAAGACCTCCTCCTTAAGGTCAACTGGAATTTTGATGAGCTTTTTGGTTaGAGGTTTTCTCACAATCTG | + |
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Preference number: 4 (lower is better) Translates to: PCMARRVQDLLLKVNWNFDELFG*RFSHNL Trigger: CAGATTGTGAGAAAACCTTCAACCAAAAAGCTCATC...AAAATTCCAGTTGACCTTAAGGAGGAGGTCTTGAACTCTCCTTGCCATGCAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGATGTCTGCGCAGTGTTaGCTTTTCTCTGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RLCQCLANTEVDANSHLLMSAQC*LFSESF Trigger: AAAGCTTTCAGAGAAAAGTCAACACTGCGCAGACAT...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR GCA 90 bp | AGGCTATGCCAGTGCCTGGCAAATACCGAAGTGGATGCTAATAGTCATTTATTGTGCTTCTCTGCATCTTaGCCATTCATAAGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: RLCQCLANTEVDANSHLLCFSAS*PFIRLF Trigger: GAAAAGCCTTATGAATGGGCAAGATGCAGAGAAGCA...CAATAAATGACTATTAGCATCCACTTCGGTATTTGCCAGGCACTGGCATAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | CCTTGCATGGCAAGGAGAGTTCAAGACCTCCTCCTTAAGGTCAACTGGAATTTTATCCATGAGGAACTTTaGTCTCTGGAAAGTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PCMARRVQDLLLKVNWNFIHEEL*SLESFF Trigger: AAAGAAACTTTCCAGAGATCAAAGTTCCTCATGGAT...AAAATTCCAGTTGACCTTAAGGAGGAGGTCTTGAACTCTCCTTGCCATGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CCA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAACATATTATGCTCCTaGGATTTCATTCTGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHNILCS*DFILSL Trigger: AAGTGACAGAATGAAATCCCAGGAGCATAATATGTT...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CCA 90 bp | TGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACAATGGGGAGGAACTTTGATCTCTaGAAAGTTTCTTTCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: CPWTEECIQKWWYIYTMGRNFDL*KVSFQF Trigger: GAATTGGAAAGAAACTTTCCAGAGATCAAAGTTCCT...CCCCATTGTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAACTACCCATGTGCTCTaGGAAAGTGGGCTTACAAAT | + |
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Preference number: 4 (lower is better) Translates to: ALTDKWILAQNLRISKIQTTHVL*ESGLTN Trigger: ATTTGTAAGCCCACTTTCTCAGAGCACATGGGTAGT...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR GCA 90 bp | TGGGGAACAAAATACCCAATGGAAGGAGTTACAGAGACAAAGTTCAGAGCTAAGCTTGACCATCTTCTGTaGAACTTGAACTTGGAATTT | + |
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Preference number: 4 (lower is better) Translates to: WGTKYPMEGVTETKFRAKLDHLL*NLNLEF Trigger: AAATTCCAAGTTCAAGTTGCACAGAAGATGGTCAAG...CTTAGCTCTGAACTTTGTCTCTGTAACTCCTTCCATTGGGTATTTTGTTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CAA 72 bp | TTCTTTTTACAGAATGCCTGGTTTTCAGGCTGTGTCTaGAACACAGCTATTAACTACTTGCCATTTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FFLQNAWFSGCV*NTAINYLPFAL Trigger: GAGAGCAAATGGCAAGTAGTTAATAGCTGTGTTCAAGACACAGCCTGAAAACCAGGCATTCTGTAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| 3UTR CAA 72 bp | ACAGCTATTAACTACTTGCCATTTGCTCTCATTTTATaGGGCAGTCCCATTGGAAGTAGCTATTCTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: TAINYLPFALIL*GSPIGSSYSHE Trigger: TTCATGAGAATAGCTACTTCCAATGGGACTGCCCAATAAAATGAGAGCAAATGGCAAGTAGTTAATAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR TCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAACCTGTATGTGTTCTTTaGTGTATATGCAGTGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: ALTDKWILAQNLRISKIQPVCVL*CICSVD Trigger: GTCAACACTGCATATACATCAAAGAACACATACAGG...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR GCA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAACACTTATCTCATGTCTaGCAGGAATTAATAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALTDKWILAQNLRISKIQHLSHV*QELIIS Trigger: GGAAATTATTAATTCCTGGCAGACATGAGATAAGTG...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACCAAGTTGTATTCAGCTaGACCATCTTCTGTGCAACT | + |
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Preference number: 5 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHQVVFS*TIFCAT Trigger: AGTTGCACAGAAGATGGTCAAGCTGAATACAACTTG...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACCTCCAGGTGCATATTTaGATTTTTCTGATGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHLQVHI*IFLMPC Trigger: GCATGGCATCAGAAAAATCAAAATATGCACCTGGAG...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CAA 90 bp | ACCCAGATGTCCCTGGACAGAGGAATGCATACAGAAATGGTGGTACATTTACACCATCTTCTGTGCAACTaGAACTTGGAATTTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TQMSLDRGMHTEMVVHLHHLLCN*NLEFLS Trigger: AGAGAGAAATTCCAAGTTCAAGTTGCACAGAAGATG...GTGTAAATGTACCACCATTTCTGTATGCATTCCTCTGTCCAGGGACATCTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CAA 90 bp | ACTCTAACATACTTCCATTCTAAGCCCCAACCTCCTATTATCTCTTTCATGATCACTGAGGTGTGCCTTTaGGTTAAATGCTCTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: TLTYFHSKPQPPIISFMITEVCL*VKCSPT Trigger: TGTGGGAGAGCATTTAACCAAAAGGCACACCTCAGT...GATCATGAAAGAGATAATAGGAGGTTGGGGCTTAGAATGGAAGTATGTTAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS TCA 90 bp | CTTTGTTTTCTTTCATCTCTGAGTTCTCTAATCCATGAGGAACTTTaGTCTCTGGAAAGTTTCTTTCCAATTCAGGGCAGTCATAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LCFLSSLSSLIHEEL*SLESFFPIQGSHRV Trigger: AACCCTATGACTGCCCTGAATTGGAAAGAAACTTTCCAGAGATCAAAGTTCCTCATGGATTAGAGAACTCAGAGATGAAAGAAAACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS-3UTR CAA 90 bp | GCACTCACTGATAAGTGGATATTAGCCCAGAATCTTAGAATATCCAAGATACAAATGCTTCTCTGCATCTaGCCCATTCATAAGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ALTDKWILAQNLRISKIQMLLCI*PIHKAF Trigger: AAAAGCCTTATGAATGGGCAAGATGCAGAGAAGCAT...TTGTATCTTGGATATTCTAAGATTCTGGGCTAATATCCACTTATCAGTGAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS TCA 72 bp | TTCTCCTATGTGAGTGATCTGATGAACAACAAGGAATaGACTTGGGCTAAGGGTTATTCTACACTCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: FSYVSDLMNNKE*TWAKGYSTLRT Trigger: TGTCCTGAGTGTAGAATAACCCTTAGCCCAAGTTCATTCCTTGTTGTTCATCAGATCACTCACATAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS GCA 72 bp | TTGCTCCAGGTGCATATTTTGATTTTTCTGATGCCATaGCAAGTTGTATTCAGCTTGACCATCTTCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLQVHILIFLMP*QVVFSLTIFCA Trigger: TGCACAGAAGATGGTCAAGCTGAATACAACTTGGCATGGCATCAGAAAAATCAAAATATGCACCTGGAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS TCA 72 bp | CTTTCATCTCTGAGTTCTCTAATCCATGAGGAACTTTaGTCTCTGGAAAGTTTCTTTCCAATTCAGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSSLSSLIHEEL*SLESFFPIQGS Trigger: ACTGCCCTGAATTGGAAAGAAACTTTCCAGAGATCAAAGTTCCTCATGGATTAGAGAACTCAGAGATGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS GCA 72 bp | GCCATGCCAAGTTGTATTCAGCTTGACCATCTTCTGTaGAACTTGAACTTGGAATTTCTCTCTTTATTATCC | + |
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Preference number: 6 (lower is better) Translates to: AMPSCIQLDHLL*NLNLEFLSLLS Trigger: GGATAATAAAGAGAGAAATTCCAAGTTCAAGTTGCACAGAAGATGGTCAAGCTGAATACAACTTGGCATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS CAA 72 bp | CTCAATAATGGATATAGCTTGCTCCAGGTGCATATTTaGATTTTTCTGATGCCATGCCAAGTTGTATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LNNGYSLLQVHI*IFLMPCQVVFS Trigger: GCTGAATACAACTTGGCATGGCATCAGAAAAATCAAAATATGCACCTGGAGCAAGCTATATCCATTATTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS CAA 90 bp | TACATTTTTCTCAATAATGGATATAGCTTGCTCCAGGTGCATATTTaGATTTTTCTGATGCCATGCCAAGTTGTATTCAGCTTGACCATC | + |
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Preference number: 6 (lower is better) Translates to: YIFLNNGYSLLQVHI*IFLMPCQVVFSLTI Trigger: GATGGTCAAGCTGAATACAACTTGGCATGGCATCAGAAAAATCAAAATATGCACCTGGAGCAAGCTATATCCATTATTGAGAAAAATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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| CDS TCA 72 bp | TCTTTGTTTTCTTTCATCTCTGAGTTCTCTAATCCATaGGGAACTTTGATCTCTGGAAAGTTTCTTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SLFSFISEFSNP*GTLISGKFLSN Trigger: ATTGGAAAGAAACTTTCCAGAGATCAAAGTTCCTCATGGATTAGAGAACTCAGAGATGAAAGAAAACAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040667.13 |
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