Pregenerated sensors for ZFP30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047473Ensembl transcript IDs: ENSMUST00000032803.12, ENSMUST00000122387.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGCTCTACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTaGTCCACTGTATGTTATTACACAATGGTTTTCCTGATACAACTT | + |
|
Preference number: 1 (lower is better) Translates to: VALPSEGRDPQAENR*STVCYYTMVFLIQL Trigger: AAGTTGTATCAGGAAAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTAGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATCTTCTTAATTCCATATaGCTCTGCGTGATTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: PSEGRDPQAENRCSTVCYLLNSI*LCVILM Trigger: CATCAGAATCACGCAGAGTCATATGGAATTAAGAAG...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTCTTCTTAATTCCATATaGCTCTGCGTGATTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: GTHRLRIAAPLYVITQWFLLNSI*LCVILM Trigger: CATCAGAATCACGCAGAGTCATATGGAATTAAGAAG...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTTTTCTGATTTCCTACTaGTCCTTAGTACATTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GTHRLRIAAPLYVITQWFFLISY*SLVHLQ Trigger: TTGCAAATGTACTAAGGAGCAGTAGGAAATCAGAAA...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCCAGGCTGAGAATCGCTaGTCCACTGTATGTTATTAC | + |
|
Preference number: 2 (lower is better) Translates to: LHNCNFATVMDHNANLCLQAENR*STVCYY Trigger: GTAATAACATACAGTGGAGCAGCGATTCTCAGCCTG...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCTTTCTGATTTCCTACTaGTCCTTAGTACATTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LHNCNFATVMDHNANLCLFLISY*SLVHLQ Trigger: TTGCAAATGTACTAAGGAGCAGTAGGAAATCAGAAA...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR TCA 72 bp | ATGCGAATCTGTGTCTCGATGGTCCTAGGTGACTCCTaGGAAAGGGTGGCTCTACCCTCAGAGGGTCGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: MRICVSMVLGDS*ERVALPSEGRD Trigger: GTCCCGACCCTCTGAGGGTAGAGCCACCCTTTCTCAGGAGTCACCTAGGACCATCGAGACACAGATTCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR TCA 72 bp | GATCATAATGCGAATCTGTGTCTCGATGGTCCTAGGTaGCTCCTGAGAAAGGGTGGCTCTACCCTCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DHNANLCLDGPR*LLRKGGSTLRG Trigger: CCCTCTGAGGGTAGAGCCACCCTTTCTCAGGAGTCACCTAGGACCATCGAGACACAGATTCGCATTATGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR GCA 72 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTaGTCCACTGTATGTTATTACACAATGGTTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSEGRDPQAENR*STVCYYTMVFL Trigger: CAGGAAAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR CCA 72 bp | TGCGTTGAGTTAGGTGGGAATATCACAATGTCGCAGTaGAAGACACGGGACGCTTTACTGTGCTACACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CVELGGNITMSQ*KTRDALLCYTG Trigger: ACCAGTGTAGCACAGTAAAGCGTCCCGTGTCTTCCACTGCGACATTGTGATATTCCCACCTAACTCAACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR TCA 72 bp | ATTCTAGAGCAGTGGTTCTCAACCTCCCTAACGCTGTaGCCCTTTAATACAGTTCCTCATGCTGTGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: ILEQWFSTSLTL*PFNTVPHAVVT Trigger: AGTCACCACAGCATGAGGAACTGTATTAAAGGGTCACAGCGTTAGGGAGGTTGAGAACCACTGCTCTAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR GCA 72 bp | AATGTTGGTGGTTGTCTCATTGATTTAGAGGTTTGGTaGGTTGAGTTAGGTGGGAATATCACAATGTCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NVGGCLIDLEVW*VELGGNITMSQ Trigger: CTGCGACATTGTGATATTCCCACCTAACTCAACGCACCAAACCTCTAAATCAATGAGACAACCACCAACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| 3UTR CCA 72 bp | TTTAATGTTGGTGGTTGTCTCATTGATTTAGAGGTTTaGTGCGTTGAGTTAGGTGGGAATATCACAATGTCG | + |
|
Preference number: 3 (lower is better) Translates to: FNVGGCLIDLEV*CVELGGNITMS Trigger: CGACATTGTGATATTCCCACCTAACTCAACGCACCAAACCTCTAAATCAATGAGACAACCACCAACATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | TACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTGATGGTAGCCGCGGCTaGAGGTCTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YPQRVGTHRLRIAAPLYVDGSRG*RSSRTP Trigger: AGGAGTGCGGGAAGACCTTCAGCCGCGGCTACCATC...AACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR GCA 90 bp | TACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTCCTGCCGGAAGCTCTTaGCGCACTCCGTGCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YPQRVGTHRLRIAAPLYVPAGSS*RTPCMR Trigger: ACGCATGCACGGAGTGCGGCAAGAGCTTCCGGCAGG...AACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR GCA 90 bp | TACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTGTGAGGTGCGCTACCTaGCGGAAGCTCTTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YPQRVGTHRLRIAAPLYVVRCAT*RKLLPH Trigger: GTGCGGCAAGAGCTTCCGGCAGGTAGCGCACCTCAC...AACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATGTGTGGATCCTCTCGTaGAGGGTGAGCTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSEGRDPQAENRCSTVCYVWILS*RVSCCL Trigger: GAGGCAGCAGCTCACCCTGCACGAGAGGATCCACAC...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTCCTCTGGTGGAGCATaGGCTGTCCACGGACTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSEGRDPQAENRCSTVCYSSGGA*AVHGLE Trigger: TTCGAGTCCGTGGACAGCTCATGCTCCACCAGAGGA...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATGGTTTCTCCCCGATGTaGATGCCCTGGTGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSEGRDPQAENRCSTVCYGFSPM*MPWWEM Trigger: CATTTCCCACCAGGGCATTCACATCGGGGAGAAACC...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATATGGTAGGTGAGGTGTaGGTGTTGACGGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSEGRDPQAENRCSTVCYMVGEV*VLTEGL Trigger: AAGGCCTTCCGTCAACACTCACACCTCACCTACCAT...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | TACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATGGTAGGTGAGGTGTaGGTGTTGACGGAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YPQRVGTHRLRIAAPLYVMVGEV*VLTEGL Trigger: AAGGCCTTCCGTCAACACTCACACCTCACCTACCAT...AACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTGATGGTAGCCGCGGCTaGAGGTCTTCCCGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFDGSRG*RSSRTP Trigger: AGGAGTGCGGGAAGACCTTCAGCCGCGGCTACCATC...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTTCCTCTGGTGGAGCATaGGCTGTCCACGGACTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFSSGGA*AVHGLE Trigger: TTCGAGTCCGTGGACAGCTCATGCTCCACCAGAGGA...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTCCGGTGTGGATCCTCTaGTGGAGCATGAGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFPVWIL*WSMSCP Trigger: TGGACAGCTCATGCTCCACCAGAGGATCCACACCGG...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTGGAAAGTAAGTTGTTaGCGGACTTTGAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSEGRDPQAENRCSTVCYWKVSC*RTLKAF Trigger: GAAGGCTTTCAAAGTCCGCCAACAACTTACTTTCCA...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTGGAACATCCTGCCAGTaGCACCAAGTGGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFGTSCQ*HQVAVV Trigger: AACTACAGCCACTTGGTGTCACTGGCAGGATGTTCC...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032803.12 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTTGGATTCTCTGGTGCTaGATGAGAGACGAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFWILWC*MRDEWR Trigger: CCTCCACTCGTCTCTCATTCAGCACCAGAGAATCCA...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTCCACAGCCACATCTCTaGACATCACCGTACTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFPQPHL*TSPYYE Trigger: CTCATAGTACGGTGATGTTCAGAGATGTGGCTGTGG...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032803.12 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTGGTCCGAGCTACACGTaGAGATCTTTGCACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFGPSYT*RSLHTS Trigger: AGAAGTGTGCAAAGATCTTCACGTGTAGCTCGGACC...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTGTTGTGAGAGGAGTCTaGAAGTCTTCTCACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFVVRGV*KSSHIP Trigger: TGGAATGTGAGAAGACTTTCAGACTCCTCTCACAAC...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR GCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCCCTGCCGGAAGCTCTTaGCGCACTCCGTGCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLPAGSS*RTPCMR Trigger: ACGCATGCACGGAGTGCGGCAAGAGCTTCCGGCAGG...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR GCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCGTGAGGTGCGCTACCTaGCGGAAGCTCTTGCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLVRCAT*RKLLPH Trigger: GTGCGGCAAGAGCTTCCGGCAGGTAGCGCACCTCAC...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTTGGAAAGTAAGTTGTTaGCGGACTTTGAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFWKVSC*RTLKAF Trigger: GAAGGCTTTCAAAGTCCGCCAACAACTTACTTTCCA...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTCTGAAATATACCCTATaGGAGTTCTCTTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTHRLRIAAPLYVITQWFLKYTL*EFSCSS Trigger: TGAAGAACAAGAGAACTCTCATAGGGTATATTTCAG...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCGGTTTCTCCCCGATGTaGATGCCCTGGTGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLGFSPM*MPWWEM Trigger: CATTTCCCACCAGGGCATTCACATCGGGGAGAAACC...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCTGGATTCTCTGGTGCTaGATGAGAGACGAGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLWILWC*MRDEWR Trigger: CCTCCACTCGTCTCTCATTCAGCACCAGAGAATCCA...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCGGTCCGAGCTACACGTaGAGATCTTTGCACACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLGPSYT*RSLHTS Trigger: AGAAGTGTGCAAAGATCTTCACGTGTAGCTCGGACC...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCGTTGTGAGAGGAGTCTaGAAGTCTTCTCACATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHNCNFATVMDHNANLCLVVRGV*KSSHIP Trigger: TGGAATGTGAGAAGACTTTCAGACTCCTCTCACAAC...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATACCTGCCGGAAGCTCTaGCCGCACTCCGTGCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSEGRDPQAENRCSTVCYTCRKL*PHSVHA Trigger: CGCATGCACGGAGTGCGGCAAGAGCTTCCGGCAGGT...ATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | TACCCTCAGAGGGTCGGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATGGAAAGTAAGTTGTaGGCGGACTTTGAAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPQRVGTHRLRIAAPLYVMESKL*ADFESL Trigger: AAGGCTTTCAAAGTCCGCCAACAACTTACTTTCCAT...AACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCCGACCCTCTGAGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTTTCGGGGCCACGCCTTaGAATTCTTCCCATTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTHRLRIAAPLYVITQWFFGATP*NSSHYF Trigger: GAAATAATGGGAAGAATTCAAAGGCGTGGCCCCGAA...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCACCTGCCGGAAGCTCTaGCCGCACTCCGTGCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHNCNFATVMDHNANLCLTCRKL*PHSVHA Trigger: CGCATGCACGGAGTGCGGCAAGAGCTTCCGGCAGGT...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS CCA 90 bp | TTTCGTAAGTATTCTTTTCTGGAAGTAACCCGTTACTGCTGTATCTaGATTCCAGATCTCGGCTCCACCTTCTCTTCTCAGCCCTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: FRKYSFLEVTRYCCI*IPDLGSTFSSQPSQ Trigger: TTGTGAGGGCTGAGAAGAGAAGGTGGAGCCGAGATCTGGAATCCAGATACAGCAGTAACGGGTTACTTCCAGAAAAGAATACTTACGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | GGGACCCACAGGCTGAGAATCGCTGCTCCACTGTATGTTATTACACAATGGTTTATGGAAAGTAAGTTGTaGGCGGACTTTGAAAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTHRLRIAAPLYVITQWFMESKL*ADFESL Trigger: AAGGCTTTCAAAGTCCGCCAACAACTTACTTTCCAT...AAACCATTGTGTAATAACATACAGTGGAGCAGCGATTCTCAGCCTGTGGGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCTTCGGGGCCACGCCTTaGAATTCTTCCCATTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHNCNFATVMDHNANLCLFGATP*NSSHYF Trigger: GAAATAATGGGAAGAATTCAAAGGCGTGGCCCCGAA...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATAACTGTAATTTTGCTACTGTAATGGATCATAATGCGAATCTGTGTCTCCTGATGGAAAGTAAGTaGTTGGCGGACTTTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHNCNFATVMDHNANLCLLMESK*LADFES Trigger: GCTTTCAAAGTCCGCCAACAACTTACTTTCCATCAG...GAGACACAGATTCGCATTATGATCCATTACAGTAGCAAAATTACAGTTATGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS GCA 72 bp | CCGTGTGCAGTTTGTGATGCAGCCGGAGGCCCGTGCTaGACAGGAAAGCCCGGCCGCACTCCTTACACTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PCAVCDAAGGPC*TGKPGRTPYTR Trigger: ACGAGTGTAAGGAGTGCGGCCGGGCTTTCCTGTGCAGCACGGGCCTCCGGCTGCATCACAAACTGCACACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS GCA 72 bp | CTCCCGTGTGCAGTTTGTGATGCAGCCGGAGGCCCGTaGTGCACAGGAAAGCCCGGCCGCACTCCTTACACT | + |
|
Preference number: 6 (lower is better) Translates to: LPCAVCDAAGGP*CTGKPGRTPYT Trigger: AGTGTAAGGAGTGCGGCCGGGCTTTCCTGTGCAGCACGGGCCTCCGGCTGCATCACAAACTGCACACGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS TCA 72 bp | TTACACTCGTGGCGTGAGCTGCCACTGTTGAGCCTCTaGTGCCGAGTGAGGTGCGCTACCTGCCGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHSWRELPLLSL*CRVRCATCRKL Trigger: GAGCTTCCGGCAGGTAGCGCACCTCACTCGGCATCAGAGGCTCAACAGTGGCAGCTCACGCCACGAGTGTAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS CCA 72 bp | TATTCTTTTCTGGAAGTAACCCGTTACTGCTGTATCTaGATTCCAGATCTCGGCTCCACCTTCTCTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: YSFLEVTRYCCI*IPDLGSTFSSQ Trigger: CTGAGAAGAGAAGGTGGAGCCGAGATCTGGAATCCAGATACAGCAGTAACGGGTTACTTCCAGAAAAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||
| CDS GCA 72 bp | TTTCGTAAGTATTCTTTTCTGGAAGTAACCCGTTACTaGTGTATCTGGATTCCAGATCTCGGCTCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FRKYSFLEVTRY*CIWIPDLGSTF Trigger: GAAGGTGGAGCCGAGATCTGGAATCCAGATACAGCAGTAACGGGTTACTTCCAGAAAAGAATACTTACGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032803.12 ENSMUST00000122387.2 |
||