Pregenerated sensors for ZFP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043602Ensembl transcript IDs: ENSMUST00000060444.6
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCAGGGGCAGGCCCTCCCGGTACAGAGCAATaGAGAAGTCTGCCTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SLSADDWHTLSGRAGAGPPGTEQ*RSLPPA Trigger: GGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGG...AGGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| 3UTR CCA 72 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTaGCACACACTCAGTGGACGGGCAGGGGCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VHKTASSLSADD*HTLSGRAGAGP Trigger: AGGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCCGGTACAGAGCAATGGAGAAGTCTGCCTCCAGCCTCCCCACACCAGGCCGGAGCTGTGCTTaGAGGCTTTGCCGCACTCAC | + |
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Preference number: 4 (lower is better) Translates to: LGPRYRAMEKSASSLPTPGRSCA*RLCRTH Trigger: GTGAGTGCGGCAAAGCCTTCAAGCACAGCTCCGGCC...TGGTGTGGGGAGGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGGGCCCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | TCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCAGGGGCAGGCCCTCCCGTGTGGATTTTCTaGTGTCTGATGAGGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSADDWHTLSGRAGAGPPVWIF*CLMRPE Trigger: CTCCGGCCTCATCAGACATCAGAAAATCCACACGGG...AGGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | GCAGGGGCAGGCCCTGTCCCTTCATCTGATCCTAGGGCCCCGGTACAGAGCAATTGGTGGACAATCAGATaGGAGGTCCGCCTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGAGPVPSSDPRAPVQSNWWTIR*EVRLKA Trigger: GGCCTTCAGGCGGACCTCTCATCTGATTGTCCACCA...ATTGCTCTGTACCGGGGCCCTAGGATCAGATGAAGGGACAGGGCCTGCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGCTCCCCAGGCAGTTGTaGCCAGAGGCAGCACATGCG | + |
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Preference number: 4 (lower is better) Translates to: HKTASSLSADDWHTLSGRLPRQL*PEAAHA Trigger: CGCATGTGCTGCCTCTGGCCACAACTGCCTGGGGAG...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGGCAGGCCCTGTCCCTTCATCTGATCCTAGGGCCCCGGTACAGAGCAATCATGTCTTCCTCGCTTaGTTCTCCAAACTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGAGPVPSSDPRAPVQSNHVFLA*FSKLMA Trigger: GGCCATGAGTTTGGAGAAGCAAGCGAGGAAGACATG...ATTGCTCTGTACCGGGGCCCTAGGATCAGATGAAGGGACAGGGCCTGCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR GCA 90 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGAGCCAGAGGCAGCACATaGGCTGGCCCTCTCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: VHKTASSLSADDWHTLSGARGST*AGPLST Trigger: GGTGCTGAGAGGGCCAGCGCATGTGCTGCCTCTGGC...TCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCGGTACAGAGCAATGGAGAAGTCTGCCTCCAGCCTCCCCACACCACTCTCGGATTCTCACTaGTTTTCTCACCTGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: LGPRYRAMEKSASSLPTPLSDSH*FSHLRT Trigger: CGTCCTCAGGTGAGAAAACCAGTGAGAATCCGAGAG...TGGTGTGGGGAGGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGGGCCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | ATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCAGGGGCAGGCCCCAGAAGTTTCTTCCTTaGGAAGTCCCTCCTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITFGRRLAHTQWTGRGRPQKFLP*EVPPFS Trigger: AGAAAAAGGAGGGACTTCCCAAGGAAGAAACTTCTG...GGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | ATCCTAGGGCCCCGGTACAGAGCAATGGAGAAGTCTGCCTCCAGCCTCCCCACACTCTCAGCACCTCCATaGCACAATACACTAGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: ILGPRYRAMEKSASSLPTLSAPP*HNTLGL Trigger: TAACCCTAGTGTATTGTGTCATGGAGGTGCTGAGAG...TGTGGGGAGGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGGGCCCTAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | GCAGGGGCAGGCCCTGTCCCTTCATCTGATCCTAGGGCCCCGGTACAGAGCAATATGGTGAATCAGATGTaGGCTCTGAATGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: AGAGPVPSSDPRAPVQSNMVNQM*ALNEGL Trigger: AAGGCCTTCATTCAGAGCTCACATCTGATTCACCAT...ATTGCTCTGTACCGGGGCCCTAGGATCAGATGAAGGGACAGGGCCTGCCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGAGGTGGGAGCTCCGACTaGAGGTCTTCTGGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: VHKTASSLSADDWHTLSGGGSSD*RSSGTP Trigger: AGGAGTGCCAGAAGACCTTCAGTCGGAGCTCCCACC...TCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR GCA 90 bp | ATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCAGGGGCAGGCCCATGGCAAACCTCCTGTaGAAGTTTTTCTACTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ITFGRRLAHTQWTGRGRPMANLL*KFFYCL Trigger: CAAACAGTAGAAAAACTTGCACAGGAGGTTTGCCAT...GGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR GCA 90 bp | AAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCACTTTGCCGCACTCACTaGACTCGTGGTATCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KTASSLSADDWHTLSGRALCRTH*TRGIFP Trigger: AGGAAAGATACCACGAGTGCAGTGAGTGCGGCAAAG...TGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCGGTACAGAGCAATGGAGAAGTCTGCCTCCAGCCTCCCCACACCATTTGCCCATGTGGCTTaGAGTCTTCAGAAGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LGPRYRAMEKSASSLPTPFAHVA*SLQKFL Trigger: AAGAAACTTCTGAAGACTCCAAGCCACATGGGCAAA...TGGTGTGGGGAGGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGGGCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCAGGCCCTGTCCCTTCATCTGATCCTAGGGCCCCGGTACAGAGCAATATAATTTCTGAGTTCTaGCCAAACGTTTTCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: AGAGPVPSSDPRAPVQSNIISEF*PNVFPH Trigger: ATGCGGGAAAACGTTTGGCCAGAACTCAGAAATTAT...ATTGCTCTGTACCGGGGCCCTAGGATCAGATGAAGGGACAGGGCCTGCCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | GATCCTAGGGCCCCGGTACAGAGCAATGGAGAAGTCTGCCTCCAGCCTCCCCACATGCTGGATGAGATGTaGGTTCTGATTAAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: DPRAPVQSNGEVCLQPPHMLDEM*VLIKSF Trigger: AAAGCTTTTAATCAGAACTCACATCTCATCCAGCAT...GTGGGGAGGCTGGAGGCAGACTTCTCCATTGCTCTGTACCGGGGCCCTAGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR TCA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGTCTTCTGGCACTCCTaGCACTCATATGGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HKTASSLSADDWHTLSGRVFWHS*HSYGFS Trigger: AGAAAAGCCATATGAGTGTCAGGAGTGCCAGAAGAC...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGAGTGAGCTGGGAGTGTTaGCTGAACGTCTTCTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VHKTASSLSADDWHTLSGVSWEC*LNVFSH Trigger: ATGCGAGAAGACGTTCAGCCAACACTCCCAGCTCAC...TCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACCAAACTCATGGCCATaGCAAACCTCCTGTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: VHKTASSLSADDWHTLSGPNSWP*QTSCAS Trigger: ACTTGCACAGGAGGTTTGCCATGGCCATGAGTTTGG...TCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR GCA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGAGTTTTTCTACTGTTTaGCCATGTGGCTTGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: HKTASSLSADDWHTLSGRSFSTV*PCGLES Trigger: AGACTCCAAGCCACATGGGCAAACAGTAGAAAAACT...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CCA 90 bp | GTTCATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGAGGTTTTTCTCCGCTATaGACTCTCATATGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: VHKTASSLSADDWHTLSGGFSPL*TLICWM Trigger: CATCCAGCATATGAGAGTCCATAGCGGAGAAAAACC...TCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | TCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCAGGGGCAGGCCCTACATGTCTTCCTCGCTaGCTTCTCCAAACTCATGGC | + |
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Preference number: 5 (lower is better) Translates to: SLSADDWHTLSGRAGAGPTCLPR*LLQTHG Trigger: GCCATGAGTTTGGAGAAGCAAGCGAGGAAGACATGT...AGGGCCTGCCCCTGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGATACTCCCCAGGCAGTaGTGGCCAGAGGCAGCACAT | + |
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Preference number: 5 (lower is better) Translates to: HKTASSLSADDWHTLSGRILPRQ*WPEAAH Trigger: ATGTGCTGCCTCTGGCCACAACTGCCTGGGGAGTAT...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGGCAGGCCCTGTCCCTTCATCTGATCCTAGGGCCCCGGTACAGAGCAATAAGTTTTTCTACTGTTaGCCCATGTGGCTTGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: AGAGPVPSSDPRAPVQSNKFFYC*PMWLGV Trigger: GACTCCAAGCCACATGGGCAAACAGTAGAAAAACTT...ATTGCTCTGTACCGGGGCCCTAGGATCAGATGAAGGGACAGGGCCTGCCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | AAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGCATCAGAAGTTTCTTCCTaGGGAAGTCCCTCCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: KTASSLSADDWHTLSGRASEVSS*GSPSFF Trigger: GAAAAAGGAGGGACTTCCCAAGGAAGAAACTTCTGA...TGCCCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGGTTTGCCCATGTGGCTaGGAGTCTTCAGAAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HKTASSLSADDWHTLSGRVCPCG*ESSEVS Trigger: AGAAACTTCTGAAGACTCCAAGCCACATGGGCAAAC...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS-3UTR CAA 90 bp | CATAAAACTGCCTCATCACTTTCGGCCGACGACTGGCACACACTCAGTGGACGGCCTGAGGACGACTTCTaGAAGATAAGTAACCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: HKTASSLSADDWHTLSGRPEDDF*KISNPD Trigger: ATCTGGGTTACTTATCTTCAAGAAGTCGTCCTCAGG...CCGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS GCA 90 bp | TTCCTCGCTTGCTTCTCCAAACTCATGGCCATGGCAAACCTCCTGTaGAAGTTTTTCTACTGTTTGCCCATGTGGCTTGGAGTCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: FLACFSKLMAMANLL*KFFYCLPMWLGVFR Trigger: TCTGAAGACTCCAAGCCACATGGGCAAACAGTAGAAAAACTTGCACAGGAGGTTTGCCATGGCCATGAGTTTGGAGAAGCAAGCGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS CCA 72 bp | ATGTCTTCCTCGCTTGCTTCTCCAAACTCATGGCCATaGCAAACCTCCTGTGCAAGTTTTTCTACTGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: MSSSLASPNSWP*QTSCASFSTVC Trigger: GCAAACAGTAGAAAAACTTGCACAGGAGGTTTGCCATGGCCATGAGTTTGGAGAAGCAAGCGAGGAAGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS CCA 72 bp | TCTGACATGTCTTCCTCGCTTGCTTCTCCAAACTCATaGCCATGGCAAACCTCCTGTGCAAGTTTTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: SDMSSSLASPNS*PWQTSCASFST Trigger: AGTAGAAAAACTTGCACAGGAGGTTTGCCATGGCCATGAGTTTGGAGAAGCAAGCGAGGAAGACATGTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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| CDS TCA 72 bp | TATAATCTCTTTCGAGGACTCTCTCAAATGTCCCTCTaGCATGTCTTCCTCGCTTGCTTCTCCAAACTCATG | + |
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Preference number: 6 (lower is better) Translates to: YNLFRGLSQMSL*HVFLACFSKLM Trigger: CATGAGTTTGGAGAAGCAAGCGAGGAAGACATGTCAGAGGGACATTTGAGAGAGTCCTCGAAAGAGATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060444.6 |
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