RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP292 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039967

Ensembl transcript IDs: ENSMUST00000047950.6, ENSMUST00000098163.9

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAATACTGGGCTACTTCACAAACCACCACCTGGCATATTTACACTaGGCCACTACTACTTTCTATCACATTGACAAAGGATATCTTAAA +
Preference number: 1 (lower is better)
Translates to: AILGYFTNHHLAYLH*ATTTFYHIDKGYLK
Trigger: TTTAAGATATCCTTTGTCAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTGTGAAGTAGCCCAGTATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCTTGTTTCCAGTCCTaGTTTCAGCTGTGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPCFQS*FQLCCY
Trigger: ATAGCAGCACAGCTGAAATCAGGACTGGAAACAAGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTCACAAACCACCACCTaGCATATTTACACTGCGCCA +
Preference number: 2 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSQTTT*HIYTAP
Trigger: TGGCGCAGTGTAAATATGCCAGGTGGTGGTTTGTGA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATCACAAACCACCACCTaGCATATTTACACTGCGCCA +
Preference number: 2 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASQTTT*HIYTAP
Trigger: TGGCGCAGTGTAAATATGCCAGGTGGTGGTTTGTGA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTAATGTGCCTACCGTaGGAAACAAAACACCTTGAT +
Preference number: 2 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVMCLP*ETKHLD
Trigger: ATCAAGGTGTTTTGTTTCGCACGGTAGGCACATTAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGATTCAGTATCGTTCATaGAAAGGACAACTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: QNREHTHVTTPPQVGAALIQYRS*KGQLGD
Trigger: GTCACCCAGTTGTCCTTTCCATGAACGATACTGAAT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAAGCTCACAACAGCATaGTTGATGGCTTTCTATTTA +
Preference number: 2 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVKLTTA*LMAFYL
Trigger: TAAATAGAAAGCCATCAAGCATGCTGTTGTGAGCTT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGTAATGTGCCTACCGTaGGAAACAAAACACCTTGAT +
Preference number: 2 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLVMCLP*ETKHLD
Trigger: ATCAAGGTGTTTTGTTTCGCACGGTAGGCACATTAC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAAGCTCACAACAGCATaGTTGATGGCTTTCTATTTA +
Preference number: 2 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLKLTTA*LMAFYL
Trigger: TAAATAGAAAGCCATCAAGCATGCTGTTGTGAGCTT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTGGGTGACAGAAATTaGAGGCTTAACTCAATTATT +
Preference number: 3 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALGDRN*RLNSII
Trigger: AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR GCA 72 bp TCCACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTaGTGTAATGTGCCTACCGTGCGAAACAAAACACCT +
Preference number: 3 (lower is better)
Translates to: STSGGWQIHRAE*CNVPTVRNKTP
Trigger: AGGTGTTTTGTTTCGCACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCTGGGTGACAGAAATTaGAGGCTTAACTCAATTATT +
Preference number: 3 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVLGDRN*RLNSII
Trigger: AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR GCA 72 bp GAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTaGCTACCGTGCGAAACAAAACACCTTGATATCATC +
Preference number: 3 (lower is better)
Translates to: EDGKFTEQSAVM*LPCETKHLDII
Trigger: GATGATATCAAGGTGTTTTGTTTCGCACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR GCA 72 bp GGCTACTTCACAAACCACCACCTGGCATATTTACACTaGGCCACTACTACTTTCTATCACATTGACAAAGGA +
Preference number: 3 (lower is better)
Translates to: GYFTNHHLAYLH*ATTTFYHIDKG
Trigger: TCCTTTGTCAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTGTGAAGTAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR CCA 72 bp TTAAGGCAATACTGGGCTACTTCACAAACCACCACCTaGCATATTTACACTGCGCCACTACTACTTTCTATC +
Preference number: 3 (lower is better)
Translates to: LRQYWATSQTTT*HIYTAPLLLSI
Trigger: GATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTGTGAAGTAGCCCAGTATTGCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR CCA 72 bp GAAAAGATACCAATCACACTAATTCAGTATCGTTCATaGAAAGGACAACTGGGTGACAGAAATTTGAGGCTT +
Preference number: 3 (lower is better)
Translates to: EKIPITLIQYRS*KGQLGDRNLRL
Trigger: AAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACGATACTGAATTAGTGTGATTGGTATCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
3UTR-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTCACAACAGCATGCTaGATGGCTTTCTATTTAAAA +
Preference number: 3 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILTTAC*MAFYLK
Trigger: TTTTAAATAGAAAGCCATCAAGCATGCTGTTGTGAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCGCCGCTCCAGCTCTTaGAGCCGCTCGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALRRSSS*SRSPRR
Trigger: GCGCCTGGGCGAGCGGCTGCAAGAGCTGGAGCGGCG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACGCCGCTCCAGCTCTTaGAGCCGCTCGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNARRSSS*SRSPRR
Trigger: GCGCCTGGGCGAGCGGCTGCAAGAGCTGGAGCGGCG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGGACCTGGGGTTGGTaGAAGCCCTGTAACACCTGC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGTWGW*KPCNTC
Trigger: GCAGGTGTTACAGGGCTTTCACCAACCCCAGGTCCC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGCATCCCCGCTGCACTaGCTTGTGCTGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALASPLH*LVLHRR
Trigger: TCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATGC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAACGCCTCTTCTCCCATaGGAGCAAGACACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNATPLLP*EQDTGA
Trigger: AGCGCCAGTGTCTTGCTCTCATGGGAGAAGAGGCGT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGAAGGCGAGACATGCTaGACCTGGGCTGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGEGETC*TWAEQA
Trigger: TGCCTGTTCAGCCCAGGTGCAGCATGTCTCGCCTTC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGAGACATGCTGCACCTaGGCTGAACAGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALETCCT*AEQAGF
Trigger: GAACCCTGCCTGTTCAGCCCAGGTGCAGCATGTCTC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGAGACATGCTGCACCTaGGCTGAACAGGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAETCCT*AEQAGF
Trigger: GAACCCTGCCTGTTCAGCCCAGGTGCAGCATGTCTC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCTCAACCTGGCAGCTaGACTTCTGACCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPQPGS*TSDLEL
Trigger: AAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCACAGGTACTGGTTTCTaGACAGGGATCACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGTGTGF*TGITSG
Trigger: GCCCGAGGTGATCCCTGTCCAGAAACCAGTACCTGT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACAGGATGCTCCTCAGTaGTCTGAACTGCTACGGCAG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAQDAPQ*SELLRQ
Trigger: CTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATCATTTCCAGATGGCTaGAGCTGGTCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASFPDG*SWSSGG
Trigger: GCCTCCTGAAGACCAGCTTCAGCCATCTGGAAATGA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGGCAGCTGAACTTCTaGCCTGGAGCTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALWQLNF*PGAFGG
Trigger: ACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGAGGAAAGAGGAGCACTaGGAAGCATCAGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALRKEEH*EASGSL
Trigger: CAAGCTGCCTGATGCTTCTCAGTGCTCCTCTTTCCT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTGCTGCTGGTACCTTaGAGGCTGGTTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGLLLVP*RLVVTQ
Trigger: CTGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTGCTGCTGGTACCTTaGAGGCTGGTTGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALLLVP*RLVVTQ
Trigger: CTGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCGGCACTCTCAAACGTaGTGGGAATGCCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGRHSQT*WECQQF
Trigger: AAACTGCTGGCATTCCCAGCACGTTTGAGAGTGCCG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGCATCACCTGTTGCTaGTGGTACCTTGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASITCC*WYLEGW
Trigger: CCAGCCTTCAAGGTACCAGCAGCAACAGGTGATGCT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCATCACCTGTTGCTaGTGGTACCTTGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSITCC*WYLEGW
Trigger: CCAGCCTTCAAGGTACCAGCAGCAACAGGTGATGCT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGCAGCATCACCTGTTaGTGCTGGTACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGCSITC*CWYLEG
Trigger: GCCTTCAAGGTACCAGCAGCAACAGGTGATGCTGCA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGCTCCAGTCAAAGGATaGAGGATGCTCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGAPVKG*RMLLSG
Trigger: ACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATCTACCTTCTTCCTGTaGAGCAGCAGCTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASTFFL*SSSWFR
Trigger: TCGGAACCAGCTGCTGCTCCACAGGAAGAAGGTAGA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACAGGTACACTTGTACTaGTGGTTCCACCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAQVHLY*WFHPLL
Trigger: CAGCAAAGGGTGGAACCATCAGTACAAGTGTACCTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCAGGTACACTTGTACTaGTGGTTCCACCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALQVHLY*WFHPLL
Trigger: CAGCAAAGGGTGGAACCATCAGTACAAGTGTACCTG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTCTTGGAAACCTGGATaGCATAACTGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALSWKPG*HNWTPA
Trigger: TGCTGGGGTCCAGTTATGTCATCCAGGTTTCCAAGA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCTTTTGGAGGTACTaGTGGAGATCCCAACGGACT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSFWRY*WRSQRT
Trigger: AGTCCGTTGGGATCTCCATCAGTACCTCCAAAAGCT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGGGCACTGGTGCTACTaGAGTCATCTGCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALGHWCY*SHLQNL
Trigger: TAAGTTCTGCAGATGACTTCAGTAGCACCAGTGCCC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTACAGGAACACACATaGCTGCTACCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALQEHT*LLPATA
Trigger: TGCTGTGGCTGGTAGCAGTCATGTGTGTTCCTGTAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAACTGCACTGAAGCTTTaGGGGGTTGGCAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNATALKL*GVGKLY
Trigger: GTACAGTTTGCCAACCCCTCAAAGCTTCAGTGCAGT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGAGTAGCTAGGAACTaGAGTTCACAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGRVARN*SSQLPL
Trigger: GAGTGGCAGCTGTGAACTGCAGTTCCTAGCTACTCT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGAGTAGCTAGGAACTaGAGTTCACAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNARVARN*SSQLPL
Trigger: GAGTGGCAGCTGTGAACTGCAGTTCCTAGCTACTCT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACAGTACATATCTCCTTaGTGGAGCTGCCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAQYISP*WSCRDR
Trigger: TCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCAGGTTCTTGTCAATaGTGTTCTCGGACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPGSCQ*CSRTFL
Trigger: GAGGAAGGTCCGAGAACAGCATTGACAAGAACCTGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTAGGTGTAGACGGTTaGGCACTGGTGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALGVDG*ALVLLK
Trigger: CTTCAGTAGCACCAGTGCCCAACCGTCTACACCTAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGGAAGGCTGTCTGTTaGTCTGTAGAAGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGKAVC*SVEVPV
Trigger: CACAGGAACTTCTACAGACCAACAGACAGCCTTCCC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATCACCTGTTGCTGCTaGTACCTTGAAGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGITCCC*YLEGWL
Trigger: CAACCAGCCTTCAAGGTACCAGCAGCAACAGGTGAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTTGCTCTAAAGACTTaGTGCTCCTTTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFALKT*CSFRWA
Trigger: AGCCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCCTTACCACAACCTGTaGACTTGCACGTGTACGTAT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALPYHNL*TCTCTY
Trigger: ATACGTACACGTGCAAGTTCACAGGTTGTGGTAAGG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTCACTGTCTGCTGGTaGAGAGAAGAGAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALTVCW*REERAI
Trigger: AATAGCTCTCTCTTCTCTTCACCAGCAGACAGTGAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTCTCACCAGTACCCTaGGATCCACTTTTTACCTCA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVSPVP*DPLFTS
Trigger: TGAGGTAAAAAGTGGATCTCAGGGTACTGGTGAGAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGAGTCACAGCTGGCTCTaGTCTGTTTTTCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALSHSWL*SVFLPI
Trigger: GATTGGGAGAAAAACAGAGCAGAGCCAGCTGTGACT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGTTGCATTAGCAAGTaGAGCATCACCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALCCISK*SITCCC
Trigger: GCAGCAACAGGTGATGCTGCACTTGCTAATGCAACA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTTATCCAGTGGTTCCTaGGAAAGGATAGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALLSSGS*ERIVES
Trigger: GCTCTCCACTATCCTTTCCCAGGAACCACTGGATAA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTACATATCTCCTTGCTaGAGCTGCCGTGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALYISPC*SCRDRK
Trigger: CTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACACATCATTTCCAGATaGCTGAAGCTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAHIISR*LKLVFR
Trigger: CCTGAAGACCAGCTTCAGCCATCTGGAAATGATGTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAATGAGCTGGGAAAATaGAAGGCGAGACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGNELGK*KARHAA
Trigger: TGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCACTCTCAAACGTGCTaGGAATGCCAGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALHSQTC*ECQQFL
Trigger: TAGAAACTGCTGGCATTCCCAGCACGTTTGAGAGTG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGTCTGACCGTGTGTTaGTATCAGGGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALCLTVC*YQGLED
Trigger: ATCTTCCAGTCCCTGATACCAACACACGGTCAGACA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCACCTGTACCAAGGTCTaGAATTGTTCCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGTCTKV*NCSHCL
Trigger: TAAGCAGTGGGAACAATTTCAGACCTTGGTACAGGT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGTACCAATCTCAGGATaGTCAGAACACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALVPISG*SEHSFA
Trigger: AGCAAAGCTGTGTTCTGATCATCCTGAGATTGGTAC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTACTCCAAAACAGAGTaGGTTCCCAAGCACAGTACA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALYSKTE*VPKHST
Trigger: TGTACTGTGCTTGGGAACTCACTCTGTTTTGGAGTA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTCGTTCAGGCACTCGTaGCCTTTCTTTTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALSFRHS*PFFSWK
Trigger: TTTCCAAGAAAAGAAAGGTCACGAGTGCCTGAACGA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGGTCGGGCTGTGACTaGACAAATGTGATACTTTCT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGRSGCD*TNVILS
Trigger: AGAAAGTATCACATTTGTTCAGTCACAGCCCGACCT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGATACACTTGCTAAATaGGCTGGGAAAATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALDTLAK*AGKMEG
Trigger: GCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGATACACTTGCTAAATaGGCTGGGAAAATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGDTLAK*AGKMEG
Trigger: GCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGAGGAAGAAACGGATCTaGGCCGCTGTCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALRKKRI*AAVNIQ
Trigger: TTGAATATTGACAGCGGCTCAGATCCGTTTCTTCCT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGGGATAGAGTTTACTaGGGGAAGTTGCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGWDRVY*GKLHAV
Trigger: TACAGCATGCAACTTCCCTCAGTAAACTCTATCCCA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTTCAGCAGAAGATGTaGCAGGCTGTGAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVQQKM*QAVKNF
Trigger: AAAGTTCTTCACAGCCTGTCACATCTTCTGCTGAAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGGCTTTTGTCTTTCTaGTGTGCAGGAATCATGCTC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNARLLSF*CAGIML
Trigger: GAGCATGATTCCTGCACATCAGAAAGACAAAAGCCT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGCTACTGAAGTCATCTaGAGAACTTACTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAATEVI*RTYLGR
Trigger: CCTTCCCAAGTAAGTTCTGCAGATGACTTCAGTAGC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGCTACTGAAGTCATCTaGAGAACTTACTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALATEVI*RTYLGR
Trigger: CCTTCCCAAGTAAGTTCTGCAGATGACTTCAGTAGC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCACCAACTGACAGTGTaGCCGGAGATTAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGHQLTV*PEIRIS
Trigger: AGAAATTCTAATCTCCGGGCACACTGTCAGTTGGTG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGATCACATGGAAATTTaGCAACATCCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALDHMEI*QHPQQQ
Trigger: CTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGATCACATGGAAATTTaGCAACATCCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNADHMEI*QHPQQQ
Trigger: CTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTTGCTTGTACACTCTaGCAAGGCATCATTCCTAGC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAFACTL*QGIIPS
Trigger: GCTAGGAATGATGCCTTGGCAGAGTGTACAAGCAAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTCAGAGGTAAGGTATaGTCGAGCTTTAACGTAGCT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALRGKV*SSFNVA
Trigger: AGCTACGTTAAAGCTCGACCATACCTTACCTCTGAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCCAATCCCAAAATTCTaGATCAAAGGGCCACTGAGT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGPIPKF*IKGPLS
Trigger: ACTCAGTGGCCCTTTGATCCAGAATTTTGGGATTGG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTCATTAACAGGTACTaGTTTCTGGACAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALINRY*FLDRDH
Trigger: GTGATCCCTGTCCAGAAACCAGTACCTGTTAATGAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTGTTTAGTCACAGCTaGCTCTGCTCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVFSHS*LCSVFL
Trigger: GAGAAAAACAGAGCAGAGCCAGCTGTGACTAAACAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGGAGACACTGCCTATTaGAACAACCTGAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGGDTAY*NNLRKH
Trigger: ATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGGGTTAACATTGTATaGGGCTCAAGACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGVNIV*GSRLAL
Trigger: TAAAGCCAGTCTTGAGCCCCATACAATGTTAACCCC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGGGGTTAACATTGTATaGGGCTCAAGACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGGVNIV*GSRLAL
Trigger: TAAAGCCAGTCTTGAGCCCCATACAATGTTAACCCC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTCCTCGGCCATGGATaGCTGTTTCTTCACTTGATT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAFLGHG*LFLHLI
Trigger: AATCAAGTGAAGAAACAGCCATCCATGGCCGAGGAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTGTTTCCTCGGCCATaGATGGCTGTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALFPRP*MAVSSL
Trigger: AAGTGAAGAAACAGCCATCCATGGCCGAGGAAACAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTTGTTTCCTCGGCCATaGATGGCTGTTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALLFPRP*MAVSSL
Trigger: AAGTGAAGAAACAGCCATCCATGGCCGAGGAAACAA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCATGTCTTCTGGAGCTaGAATGGGATCCTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGHVFWS*NGILFY
Trigger: GTAAAAGAGGATCCCATTCCAGCTCCAGAAGACATG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCACACCCCAGTCTCCTaGGCTAGAGTAGCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVHTPVS*ARVARN
Trigger: GTTCCTAGCTACTCTAGCTCAGGAGACTGGGGTGTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGAAATTCACTCAACTaGCAAGCACGTTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNARNSLN*QARLTS
Trigger: GGAAGTCAAACGTGCTTGTCAGTTGAGTGAATTTCT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGGATCAAAGGGCCACTaGGTTTTCAAAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGGSKGH*VFKTSK
Trigger: CTTACTTGTTTTGAAAACTCAGTGGCCCTTTGATCC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATCTGCACTTCTGTTTaGACCCAGGTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGICTSV*TQVLVN
Trigger: ATTGACAAGAACCTGGGTTCAAACAGAAGTGCAGAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGATCATAAAGGCTGGATaGGGTTTTAACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALIIKAG*GFNITS
Trigger: GGAGGTGATGTTAAAACCTCATCCAGCCTTTATGAT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCTGGATCTTGTATTCTaGGGCCCACTTATAACAGAA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALLDLVF*GPLITE
Trigger: TTCTGTTATAAGTGGGCCTCAGAATACAAGATCCAG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGACTCTGTCATTAAGCTaGACATGTATCACTTCGGGT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALTLSLS*TCITSG
Trigger: ACCCGAAGTGATACATGTTCAGCTTAATGACAGAGT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGCTGTTTCTTCACTTaGTTATTCTGTGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGCFFT*LFCGDD
Trigger: GTCATCTCCACAGAATAATCAAGTGAAGAAACAGCC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGGCTGTTTCTTCACTTaGTTATTCTGTGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGGCFFT*LFCGDD
Trigger: GTCATCTCCACAGAATAATCAAGTGAAGAAACAGCC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGTAGGTTTCATTTCCTaGAGCTGTTTTAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALVGFIS*SCFRTS
Trigger: GCTTGTCCTAAAACAGCTTCAGGAAATGAAACCTAC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGGTTCCACCCTTTGCTaGAATTTACTCCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGGSTLC*NLLQNR
Trigger: TCTGTTTTGGAGTAAATTGCAGCAAAGGGTGGAACC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGGTTCCACCCTTTGCTaGAATTTACTCCAAAACAGA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALGSTLC*NLLQNR
Trigger: TCTGTTTTGGAGTAAATTGCAGCAAAGGGTGGAACC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAATATTGGTCAGGGTGTaGTGTCTTCATGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAILVRV*CLHVFS
Trigger: GGAAAACACATGAAGACAGCACACCCTGACCAATAT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTCTGGGATTACTGTTaGATTAGCAAGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFWDYC*ISKCSI
Trigger: GATGCTGCACTTGCTAATGCAACAGTAATCCCAGAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTATGCCATCTTCTTCTaGCTTACTTGTCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALYAIFF*LTCPCS
Trigger: GGAACAAGGACAAGTAAGGCAGAAGAAGATGGCATA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCTCAGTGGTCTGAACTaGTACGGCAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVLSGLN*YGRLFL
Trigger: GAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTAAAAGCAGCATATTaGTCAGGGTGTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALKAAY*SGCAVF
Trigger: GAAGACAGCACACCCTGACCAATATGCTGCTTTTAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATCTTCCATTTGTGCTaGCAAGGGAGCATTAGACAA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGIFHLC*QGSIRQ
Trigger: TTGTCTAATGCTCCCTTGCCAGCACAAATGGAAGAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTTCTGCTCCATCCAGTaGTTTGCAGTAAGACCTTTT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALFCSIQ*FAVRPF
Trigger: AAAAGGTCTTACTGCAAACCACTGGATGGAGCAGAA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATATCACTTCGGGTACTaGCTGGACTACAATATTTGG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAYHFGY*LDYNIW
Trigger: CCAAATATTGTAGTCCAGCCAGTACCCGAAGTGATA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCTCCAACTGATCACATaGAAATTTGCCAACATCCAC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGLQLIT*KFANIH
Trigger: GTGGATGTTGGCAAATTTCCATGTGATCAGTTGGAG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTTGGCCGAATCAGATaGGCTTTATGCTTGTCATTA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALGRIR*ALCLSL
Trigger: TAATGACAAGCATAAAGCCCATCTGATTCGGCCAAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCAGGATGCTCCTCAGTaGTCTGAACTGCTACGGCAG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVQDAPQ*SELLRQ
Trigger: CTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTGGCAGCTGAACTTCTaGCCTGGAGCTTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVWQLNF*PGAFGG
Trigger: ACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGAACTGTTACATTCTTTaGGGGTTTTGGAATTTGGCG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALNCYIL*GFWNLA
Trigger: CGCCAAATTCCAAAACCCTCAAAGAATGTAACAGTT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTACAGCCTTGGTTTTaGCACACAAAGGGCTTATTA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGLQPWF*HTKGLL
Trigger: TAATAAGCCCTTTGTGTGTCAAAACCAAGGCTGTAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGAACAGTCACTCACCTaGCACCTAAATTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAEQSLT*HLNSFI
Trigger: AATGAAAGAATTTAGGTGTCAGGTGAGTGACTGTTC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGAACAGTCACTCACCTaGCACCTAAATTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGEQSLT*HLNSFI
Trigger: AATGAAAGAATTTAGGTGTCAGGTGAGTGACTGTTC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAACTTACACTCCAACTaGTCACATGGAAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNANLHSN*SHGNLP
Trigger: TGGCAAATTTCCATGTGATCAGTTGGAGTGTAAGTT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTGGTTTGCCTTACTTaGTATATTTTCCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALVCLT*YIFLAS
Trigger: ACTGGCCAGGAAAATATATCAAGTAAGGCAAACCAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCAGGAATCATGCTCCTaGAATTCGTTATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALQESCS*NSLFPF
Trigger: AAAGGGAAATAACGAATTTCAGGAGCATGATTCCTG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCTCCACAGCATAATATaGATCTACTGTAGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALLHSII*IYCRLN
Trigger: ATTGAGCCTACAGTAGATGCATATTATGCTGTGGAG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAAACTCCATTTTCACTaGTGCCTCCTTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAKLHFH*CLLSEK
Trigger: CTTTTCTGAAAGGAGGCAGCAGTGAAAATGGAGTTT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGTCACACTTGTATATaGCATCTTCTTCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASHTCI*HLLLPY
Trigger: GTAAGGCAGAAGAAGATGGCATATACAAGTGTGACT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGCCTTCTACAGTACTaGCAAATGACTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGCLLQY*QMTFLL
Trigger: AAGCAAGAAAGTCATTTGCCAGTACTGTAGAAGGCA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGGCCAGTAATTGCTTaGAAAATCCTAGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGRPVIA*KILEQS
Trigger: TGACTGTTCTAGGATTTTCCAAGCAATTACTGGCCT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGATTTCCTTTCCTTGTaGGTTGCCATATCGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNADFLSL*VAISLK
Trigger: TTTAAGCGATATGGCAACCCACAAGGAAAGGAAATC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAAAGTGGTATTGCCTTaGTTTTCTGCATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAKVVLP*FSAFVL
Trigger: CAGCACAAATGCAGAAAACCAAGGCAATACCACTTT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGAAGCTTTGAGGGGTTaGCAAACTGTACAAAGATTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGEALRG*QTVQRF
Trigger: AAATCTTTGTACAGTTTGCCAACCCCTCAAAGCTTC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGACTGACAAGCACGTTTaGCTTCCAGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVTDKHV*LPDPQA
Trigger: TGCCTGAGGATCTGGAAGTCAAACGTGCTTGTCAGT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTACAGTACTGGCAAATaGCTTTCTTGCTTTGCATTT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALYSTGK*LSCFAF
Trigger: AAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGTCCATGTTTATCCTaGGAAGGTATATTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGCPCLS*EGIFGL
Trigger: AAGTCCAAATATACCTTCTCAGGATAAACATGGACA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGGGACCTGGGGTTGGTaGAAGCCCTGTAACACCTGC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLGTWGW*KPCNTC
Trigger: GCAGGTGTTACAGGGCTTTCACCAACCCCAGGTCCC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCCGATGTTTAGACTTTaGTTTTTCTTGGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGPMFRL*FFLVCL
Trigger: AAGGCAAACCAAGAAAAATCAAAGTCTAAACATCGG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTCACTTGTAACGACTaGAGTACACCCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAFTCND*STPFYH
Trigger: ATGATAAAAGGGTGTACTTCAGTCGTTACAAGTGAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTTTACTTCCACTGTTTaGATGGTCTCTGTCACTATT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALFTSTV*MVSVTI
Trigger: AATAGTGACAGAGACCATTCAAACAGTGGAAGTAAA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTTACTTCCACTGTTTaGATGGTCTCTGTCACTATT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFTSTV*MVSVTI
Trigger: AATAGTGACAGAGACCATTCAAACAGTGGAAGTAAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGACTGCACTGAAGCTTTaGGGGGTTGGCAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVTALKL*GVGKLY
Trigger: GTACAGTTTGCCAACCCCTCAAAGCTTCAGTGCAGT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTCCTCTTCAACCTCTaGAGAAAATGTAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAFLFNL*RKCRKI
Trigger: AATCTTCCTACATTTTCTGCAGAGGTTGAAGAGGAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTATTTTCCTCAATCTaGACTACTTTTGCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALFSSI*TTFALL
Trigger: CAAGAGCGCAAAAGTAGTGCAGATTGAGGAAAATAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAATTGCCTTGGTTTTCTaGATTTGTGCTGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAIALVF*ICAVFI
Trigger: AATGAAGACAGCACAAATGCAGAAAACCAAGGCAAT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCCTTTAAAGTGGTATTaGCTTGGTTTTCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALPLKWY*LGFLHL
Trigger: CAAATGCAGAAAACCAAGGCAATACCACTTTAAAGG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTCTTCATCATATTTCTaGTCTGGCTGGTTGTATAAC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSSSYF*SGWLYN
Trigger: GTTATACAACCAGCCAGACCAGAAATATGATGAAGA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAATTCTTTGCACATATaGGACAGCTGTAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNANSLHI*DSCKSH
Trigger: ATGGGATTTACAGCTGTCCCATATGTGCAAAGAATT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCTTTCCTTCCCATTTaGGCCTCGACCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSFLPI*ASTTVF
Trigger: AAAGACCGTGGTCGAGGCCCAAATGGGAAGGAAAGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGGGAAGGCTGTCTGTTaGTCTGTAGAAGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVGKAVC*SVEVPV
Trigger: CACAGGAACTTCTACAGACCAACAGACAGCCTTCCC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATGCAAGTTGTTTTTCTaGGATTACTGTTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNACKLFF*DYCCIS
Trigger: GCTAATGCAACAGTAATCCCAGAAAAACAACTTGCA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCACCAAGGATACTTCTaGCTCAGTTTTATCAATCTT +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALHQGYF*LSFINL
Trigger: AAGATTGATAAAACTGAGCCAGAAGTATCCTTGGTG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACACCAAGGATACTTCTaGCTCAGTTTTATCAATCTT +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAHQGYF*LSFINL
Trigger: AAGATTGATAAAACTGAGCCAGAAGTATCCTTGGTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTTGCTCTAAAGACTTaGTGCTCCTTTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVFALKT*CSFRWA
Trigger: AGCCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCCTTACCACAACCTGTaGACTTGCACGTGTACGTAT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVPYHNL*TCTCTY
Trigger: ATACGTACACGTGCAAGTTCACAGGTTGTGGTAAGG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATTGTCTTCAAGTCCTaGCTCATTTTGTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGIVFKS*LILYRK
Trigger: TTTTCTGTACAAAATGAGGCAGGACTTGAAGACAAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGAAGGCGAGACATGCTaGACCTGGGCTGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLEGETC*TWAEQA
Trigger: TGCCTGTTCAGCCCAGGTGCAGCATGTCTCGCCTTC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTTCAAGAAAGCGTTTaGCATCTTCACTATCCTTAT +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFQESV*HLHYPY
Trigger: ATAAGGATAGTGAAGATGCCAAACGCTTTCTTGAAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCACATCATTTCCAGATaGCTGAAGCTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVHIISR*LKLVFR
Trigger: CCTGAAGACCAGCTTCAGCCATCTGGAAATGATGTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCACTCTCAAACGTGCTaGGAATGCCAGCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVHSQTC*ECQQFL
Trigger: TAGAAACTGCTGGCATTCCCAGCACGTTTGAGAGTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGGTAAAATTTTGTGGTaGTTCAGTAGAACTACTGAA +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALGKILW*FSRTTE
Trigger: TTCAGTAGTTCTACTGAACCACCACAAAATTTTACC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGTAAAATTTTGTGGTaGTTCAGTAGAACTACTGAA +
Preference number: 4 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGKILW*FSRTTE
Trigger: TTCAGTAGTTCTACTGAACCACCACAAAATTTTACC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTTTTATTCAAATGACTaGATCTTGTATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALFYSND*ILYSEA
Trigger: GGCCTCAGAATACAAGATCCAGTCATTTGAATAAAA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTTTATTCAAATGACTaGATCTTGTATTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFYSND*ILYSEA
Trigger: GGCCTCAGAATACAAGATCCAGTCATTTGAATAAAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCATACTCTGGGAAGCTaGAGCAGAGGTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVHTLGS*SRGVIF
Trigger: GAAAATGACACCTCTGCTCCAGCTTCCCAGAGTATG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCTTGATATATTTTCCTaGCCAGTTAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QNREHTHVTTPPQVGAALLDIFS*PVNFLG
Trigger: GCCAAGAAAATTAACTGGCCAGGAAAATATATCAAG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCACACCCCAGTCTCCTaGGCTAGAGTAGCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLHTPVS*ARVARN
Trigger: GTTCCTAGCTACTCTAGCTCAGGAGACTGGGGTGTG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAGGAAGAAACGGATCTaGGCCGCTGTCAATATTCAA +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVRKKRI*AAVNIQ
Trigger: TTGAATATTGACAGCGGCTCAGATCCGTTTCTTCCT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTGGGATAGAGTTTACTaGGGGAAGTTGCATGCTGTA +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVWDRVY*GKLHAV
Trigger: TACAGCATGCAACTTCCCTCAGTAAACTCTATCCCA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGTTCAGCAGAAGATGTaGCAGGCTGTGAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVVQQKM*QAVKNF
Trigger: AAAGTTCTTCACAGCCTGTCACATCTTCTGCTGAAC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGGAGACACTGCCTATTaGAACAACCTGAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVGDTAY*NNLRKH
Trigger: ATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAGAAATTCACTCAACTaGCAAGCACGTTTGACTTCC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVRNSLN*QARLTS
Trigger: GGAAGTCAAACGTGCTTGTCAGTTGAGTGAATTTCT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGGATCAAAGGGCCACTaGGTTTTCAAAACAAGTAAG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVGSKGH*VFKTSK
Trigger: CTTACTTGTTTTGAAAACTCAGTGGCCCTTTGATCC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGATCTGCACTTCTGTTTaGACCCAGGTTCTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVICTSV*TQVLVN
Trigger: ATTGACAAGAACCTGGGTTCAAACAGAAGTGCAGAT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGGTTTCCAGACCATTTaGCAATGGTATGTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVGFQTI*QWYVSL
Trigger: CAAGCTAACATACCATTGTCAAATGGTCTGGAAACC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGCATCCCCGCTGCACTaGCTTGTGCTGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIASPLH*LVLHRR
Trigger: TCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATGC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAGGAAAGAGGAGCACTaGGAAGCATCAGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLRKEEH*EASGSL
Trigger: CAAGCTGCCTGATGCTTCTCAGTGCTCCTCTTTCCT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTGCAGCATCACCTGTTaGTGCTGGTACCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLCSITC*CWYLEG
Trigger: GCCTTCAAGGTACCAGCAGCAACAGGTGATGCTGCA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCCACAGCAGCAGTCATaGTTTCAATTTCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLPQQQS*FQFPRG
Trigger: CCCCCGAGGAAATTGAAAGCATGACTGCTGCTGTGG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTATGCCATCTTCTTCTaGCTTACTTGTCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVYAIFF*LTCPCS
Trigger: GGAACAAGGACAAGTAAGGCAGAAGAAGATGGCATA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTTGATAAAGAATTCTaGGCTTCGTTCAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVFDKEF*ASFRHS
Trigger: CGAGTGCCTGAACGAAGCCCAGAATTCTTTATCAAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTCTACCTTCTTCCTGTaGAGCAGCAGCTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSTFFL*SSSWFR
Trigger: TCGGAACCAGCTGCTGCTCCACAGGAAGAAGGTAGA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGACTGACAAGCACGTTTaGCTTCCAGATCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLTDKHV*LPDPQA
Trigger: TGCCTGAGGATCTGGAAGTCAAACGTGCTTGTCAGT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTACGCCTCTTCTCCCATaGGAGCAAGACACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIITPLLP*EQDTGA
Trigger: AGCGCCAGTGTCTTGCTCTCATGGGAGAAGAGGCGT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGGGCACTGGTGCTACTaGAGTCATCTGCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLGHWCY*SHLQNL
Trigger: TAAGTTCTGCAGATGACTTCAGTAGCACCAGTGCCC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCAGGAATCATGCTCCTaGAATTCGTTATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVQESCS*NSLFPF
Trigger: AAAGGGAAATAACGAATTTCAGGAGCATGATTCCTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTACAGGAACACACATaGCTGCTACCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLQEHT*LLPATA
Trigger: TGCTGTGGCTGGTAGCAGTCATGTGTGTTCCTGTAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGATAGTGGAGAGCACTaGGTTTTTCCACACCCCAGT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLDSGEH*VFPHPS
Trigger: ACTGGGGTGTGGAAAAACGCAGTGCTCTCCACTATC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCAGTACATATCTCCTTaGTGGAGCTGCCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLQYISP*WSCRDR
Trigger: TCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAAACTCCATTTTCACTaGTGCCTCCTTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVKLHFH*CLLSEK
Trigger: CTTTTCTGAAAGGAGGCAGCAGTGAAAATGGAGTTT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAGTCACACTTGTATATaGCATCTTCTTCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSHTCI*HLLLPY
Trigger: GTAAGGCAGAAGAAGATGGCATATACAAGTGTGACT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTTTTACATTCTCACTaGACTGAAGCTTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVFLHSH*TEALRG
Trigger: ACCCCTCAAAGCTTCAGTGCAGTGAGAATGTAAAAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTAGGTGTAGACGGTTaGGCACTGGTGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLGVDG*ALVLLK
Trigger: CTTCAGTAGCACCAGTGCCCAACCGTCTACACCTAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTCTTTCCTTCCCATTTaGGCCTCGACCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSFLPI*ASTTVF
Trigger: AAAGACCGTGGTCGAGGCCCAAATGGGAAGGAAAGA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGAAGCTTTGAGGGGTTaGCAAACTGTACAAAGATTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVEALRG*QTVQRF
Trigger: AAATCTTTGTACAGTTTGCCAACCCCTCAAAGCTTC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAGCCCCTTCAGTCTCTaGATTAATAACTTTAATCAG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSPFSL*INNFNQ
Trigger: CTGATTAAAGTTATTAATTCAGAGACTGAAGGGGCT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTACAGTACTGGCAAATaGCTTTCTTGCTTTGCATTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVYSTGK*LSCFAF
Trigger: AAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCCTCAACCTGGCAGCTaGACTTCTGACCTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIPQPGS*TSDLEL
Trigger: AAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCTCACTGTCTGCTGGTaGAGAGAAGAGAGAGCTATT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLTVCW*REERAI
Trigger: AATAGCTCTCTCTTCTCTTCACCAGCAGACAGTGAG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTATTTAATTTCTGTGTaGGATTTTCCACCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVYLISV*DFPPKP
Trigger: GGGCTTTGGTGGAAAATCTCACACAGAAATTAAATA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCCGATGTTTAGACTTTaGTTTTTCTTGGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVPMFRL*FFLVCL
Trigger: AAGGCAAACCAAGAAAAATCAAAGTCTAAACATCGG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAGTCACAGCTGGCTCTaGTCTGTTTTTCTCCCAATC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSHSWL*SVFLPI
Trigger: GATTGGGAGAAAAACAGAGCAGAGCCAGCTGTGACT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTCCTCTTCAACCTCTaGAGAAAATGTAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVFLFNL*RKCRKI
Trigger: AATCTTCCTACATTTTCTGCAGAGGTTGAAGAGGAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTATTTTCCTCAATCTaGACTACTTTTGCGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVLFSSI*TTFALL
Trigger: CAAGAGCGCAAAAGTAGTGCAGATTGAGGAAAATAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTCAGTGGTCTGAACTaGTACGGCAGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILSGLN*YGRLFL
Trigger: GAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCATATCCAACAAGATaGGACCCTCAAAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSYPTR*DPQKLK
Trigger: TTTTAGCTTTTGAGGGTCCCATCTTGTTGGATATGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000047950.6
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAATGAGCTGGGAAAATaGAAGGCGAGACATGCTGCA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLNELGK*KARHAA
Trigger: TGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCATACTCTGGGAAGCTaGAGCAGAGGTGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLHTLGS*SRGVIF
Trigger: GAAAATGACACCTCTGCTCCAGCTTCCCAGAGTATG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTGCAAGTTGTTTTTCTaGGATTACTGTTGCATTAGC +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVCKLFF*DYCCIS
Trigger: GCTAATGCAACAGTAATCCCAGAAAAACAACTTGCA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTCATTTCCAGATGGCTaGAGCTGGTCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISFPDG*SWSSGG
Trigger: GCCTCCTGAAGACCAGCTTCAGCCATCTGGAAATGA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAGGCTTTTGTCTTTCTaGTGTGCAGGAATCATGCTC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLRLLSF*CAGIML
Trigger: GAGCATGATTCCTGCACATCAGAAAGACAAAAGCCT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCGGCACTCTCAAACGTaGTGGGAATGCCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIRHSQT*WECQQF
Trigger: AAACTGCTGGCATTCCCAGCACGTTTGAGAGTGCCG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGCTCCAGTCAAAGGATaGAGGATGCTCCTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIAPVKG*RMLLSG
Trigger: ACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGTGTTTAGTCACAGCTaGCTCTGCTCTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLVFSHS*LCSVFL
Trigger: GAGAAAAACAGAGCAGAGCCAGCTGTGACTAAACAC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCACCAGTGCCTTCCATaGTTAGGTTTTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLHQCLP*LGFLAF
Trigger: GAAAGCAAGAAAACCTAACCATGGAAGGCACTGGTG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCCCAGCACCTATACCTaGTTTATGCACATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLPSTYT*FMHICD
Trigger: ATCACAGATGTGCATAAACCAGGTATAGGTGCTGGG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGTTGGTAGCACATTTTaGGAAGTATTAGATACACTT +
Preference number: 4 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVVGSTF*EVLDTL
Trigger: AAGTGTATCTAATACTTCCCAAAATGTGCTACCAAC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTCCTCGGCCATGGATaGCTGTTTCTTCACTTGATT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLFLGHG*LFLHLI
Trigger: AATCAAGTGAAGAAACAGCCATCCATGGCCGAGGAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGGAAGTTCAAAGGCCTaGGAAACTGGATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLGSSKA*ETGFFS
Trigger: GGAAAAGAATCCAGTTTCCCAGGCCTTTGAACTTCC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGGTTTCCAGACCATTTaGCAATGGTATGTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLGFQTI*QWYVSL
Trigger: CAAGCTAACATACCATTGTCAAATGGTCTGGAAACC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTCTTGGAAACCTGGATaGCATAACTGGACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISWKPG*HNWTPA
Trigger: TGCTGGGGTCCAGTTATGTCATCCAGGTTTCCAAGA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGATCATAAAGGCTGGATaGGGTTTTAACATCACCTCC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLIIKAG*GFNITS
Trigger: GGAGGTGATGTTAAAACCTCATCCAGCCTTTATGAT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAGCTTTTGGAGGTACTaGTGGAGATCCCAACGGACT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISFWRY*WRSQRT
Trigger: AGTCCGTTGGGATCTCCATCAGTACCTCCAAAAGCT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCTGGATCTTGTATTCTaGGGCCCACTTATAACAGAA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLDLVF*GPLITE
Trigger: TTCTGTTATAAGTGGGCCTCAGAATACAAGATCCAG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGACTCTGTCATTAAGCTaGACATGTATCACTTCGGGT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLTLSLS*TCITSG
Trigger: ACCCGAAGTGATACATGTTCAGCTTAATGACAGAGT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGTAGGTTTCATTTCCTaGAGCTGTTTTAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLVGFIS*SCFRTS
Trigger: GCTTGTCCTAAAACAGCTTCAGGAAATGAAACCTAC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGATGGTTCCACCCTTTaGTGCAATTTACTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLDGSTL*CNLLQN
Trigger: GTTTTGGAGTAAATTGCAGCAAAGGGTGGAACCATC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTAAAAGCAGCATATTaGTCAGGGTGTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLKAAY*SGCAVF
Trigger: GAAGACAGCACACCCTGACCAATATGCTGCTTTTAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTCTGCTCCATCCAGTaGTTTGCAGTAAGACCTTTT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLFCSIQ*FAVRPF
Trigger: AAAAGGTCTTACTGCAAACCACTGGATGGAGCAGAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGACTTCGGGTACTGGCTaGACTACAATATTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLTSGTG*TTIFGV
Trigger: AACTCCAAATATTGTAGTCCAGCCAGTACCCGAAGT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAGTAGAACTACTGAATaGATTGGAGCACAAGCCATT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSRTTE*IGAQAI
Trigger: AATGGCTTGTGCTCCAATTCATTCAGTAGTTCTACT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGTCTCACCAGTACCCTaGGATCCACTTTTTACCTCA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIVSPVP*DPLFTS
Trigger: TGAGGTAAAAAGTGGATCTCAGGGTACTGGTGAGAC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCTCCACAGCATAATATaGATCTACTGTAGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLHSII*IYCRLN
Trigger: ATTGAGCCTACAGTAGATGCATATTATGCTGTGGAG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGATGGTTAGGTTTTCTTaGTTTCCAAAGTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLMVRFS*FPKSPS
Trigger: AGAGGGTGACTTTGGAAAGCAAGAAAACCTAACCAT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTGTTGCATTAGCAAGTaGAGCATCACCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIICCISK*SITCCC
Trigger: GCAGCAACAGGTGATGCTGCACTTGCTAATGCAACA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTATCCAGTGGTTCCTaGGAAAGGATAGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILSSGS*ERIVES
Trigger: GCTCTCCACTATCCTTTCCCAGGAACCACTGGATAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTATTTCTGGTCTGGCTaGTTGTATAACATCTCCACA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLYFWSG*LYNIST
Trigger: TGTGGAGATGTTATACAACCAGCCAGACCAGAAATA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTGTCTGACCGTGTGTTaGTATCAGGGACTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIICLTVC*YQGLED
Trigger: ATCTTCCAGTCCCTGATACCAACACACGGTCAGACA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTACCTGTACCAAGGTCTaGAATTGTTCCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIITCTKV*NCSHCL
Trigger: TAAGCAGTGGGAACAATTTCAGACCTTGGTACAGGT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTACTCCAAAACAGAGTaGGTTCCCAAGCACAGTACA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIYSKTE*VPKHST
Trigger: TGTACTGTGCTTGGGAACTCACTCTGTTTTGGAGTA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAGGTCGGGCTGTGACTaGACAAATGTGATACTTTCT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIRSGCD*TNVILS
Trigger: AGAAAGTATCACATTTGTTCAGTCACAGCCCGACCT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTCACTTGTAACGACTaGAGTACACCCTTTTATCAT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLFTCND*STPFYH
Trigger: ATGATAAAAGGGTGTACTTCAGTCGTTACAAGTGAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGACTGTTGCGGCTGTTaGATATTTACTGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIDCCGC*IFTALV
Trigger: CACAAGTGCAGTAAATATGCAACAGCCGCAACAGTC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTCCACATTAAGAAGTTaGAGGAATGATGGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSTLRS*RNDGSL
Trigger: TAAAGACCCATCATTCCTGCAACTTCTTAATGTGGA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCCTTTAAAGTGGTATTaGCTTGGTTTTCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLPLKWY*LGFLHL
Trigger: CAAATGCAGAAAACCAAGGCAATACCACTTTAAAGG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTTCTTCTGCTTCACTaGAGACTCTTCAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLFLLLH*RLFKKL
Trigger: AAGTTTCTTGAAGAGTCTGCAGTGAAGCAGAAGAAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCACCAGTGCCTTCCATaGTTAGGTTTTCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIHQCLP*LGFLAF
Trigger: GAAAGCAAGAAAACCTAACCATGGAAGGCACTGGTG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCCCAGCACCTATACCTaGTTTATGCACATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIPSTYT*FMHICD
Trigger: ATCACAGATGTGCATAAACCAGGTATAGGTGCTGGG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGGAAGTTCAAAGGCCTaGGAAACTGGATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIGSSKA*ETGFFS
Trigger: GGAAAAGAATCCAGTTTCCCAGGCCTTTGAACTTCC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCTTTCGCTTTGTCTTTaGCATTTTCATTCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLSLCL*HFHSVF
Trigger: AAAGACGGAATGAAAATGCCAAAGACAAAGCGAAAG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTTGATAAAGAATTCTaGGCTTCGTTCAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIFDKEF*ASFRHS
Trigger: CGAGTGCCTGAACGAAGCCCAGAATTCTTTATCAAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTATCTTCCATTTGTGCTaGCAAGGGAGCATTAGACAA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIIFHLC*QGSIRQ
Trigger: TTGTCTAATGCTCCCTTGCCAGCACAAATGGAAGAT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTACTTCGGGTACTGGCTaGACTACAATATTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIITSGTG*TTIFGV
Trigger: AACTCCAAATATTGTAGTCCAGCCAGTACCCGAAGT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTATCACTTCGGGTACTaGCTGGACTACAATATTTGG +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIYHFGY*LDYNIW
Trigger: CCAAATATTGTAGTCCAGCCAGTACCCGAAGTGATA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTACAGCCTTGGTTTTaGCACACAAAGGGCTTATTA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILQPWF*HTKGLL
Trigger: TAATAAGCCCTTTGTGTGTCAAAACCAAGGCTGTAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTTTTACATTCTCACTaGACTGAAGCTTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIFLHSH*TEALRG
Trigger: ACCCCTCAAAGCTTCAGTGCAGTGAGAATGTAAAAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTATTTCTGGTCTGGCTaGTTGTATAACATCTCCACA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIYFWSG*LYNIST
Trigger: TGTGGAGATGTTATACAACCAGCCAGACCAGAAATA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAGGCCAGTAATTGCTTaGAAAATCCTAGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIRPVIA*KILEQS
Trigger: TGACTGTTCTAGGATTTTCCAAGCAATTACTGGCCT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGATTTCCTTTCCTTGTaGGTTGCCATATCGCTTAAA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIDFLSL*VAISLK
Trigger: TTTAAGCGATATGGCAACCCACAAGGAAAGGAAATC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAAAGTGGTATTGCCTTaGTTTTCTGCATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIKVVLP*FSAFVL
Trigger: CAGCACAAATGCAGAAAACCAAGGCAATACCACTTT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTCATATCCAACAAGATaGGACCCTCAAAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISYPTR*DPQKLS
Trigger: AGAAAGCTTTTGAGGGTCCCATCTTGTTGGATATGA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTGTCCATGTTTATCCTaGGAAGGTATATTTGGACTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIICPCLS*EGIFGL
Trigger: AAGTCCAAATATACCTTCTCAGGATAAACATGGACA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTATTTAATTTCTGTGTaGGATTTTCCACCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIYLISV*DFPPKP
Trigger: GGGCTTTGGTGGAAAATCTCACACAGAAATTAAATA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR TCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTACAATATTTGGAGTTaGTTTAGTAGGAGTAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIYNIWS*FSRSRG
Trigger: TCCCCTACTCCTACTAAATCAACTCCAAATATTGTA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTCCACATTAAGAAGTTaGAGGAATGATGGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISTLRS*RNDGSL
Trigger: TAAAGACCCATCATTCCTGCAACTTCTTAATGTGGA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTATTGCCTTGGTTTTCTaGATTTGTGCTGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIIALVF*ICAVFI
Trigger: AATGAAGACAGCACAAATGCAGAAAACCAAGGCAAT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTTCTTCTGCTTCACTaGAGACTCTTCAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIFLLLH*RLFKKL
Trigger: AAGTTTCTTGAAGAGTCTGCAGTGAAGCAGAAGAAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTCTTCATCATATTTCTaGTCTGGCTGGTTGTATAAC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIISSSYF*SGWLYN
Trigger: GTTATACAACCAGCCAGACCAGAAATATGATGAAGA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAATTCTTTGCACATATaGGACAGCTGTAAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIINSLHI*DSCKSH
Trigger: ATGGGATTTACAGCTGTCCCATATGTGCAAAGAATT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTTTCGCTTTGTCTTTaGCATTTTCATTCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILSLCL*HFHSVF
Trigger: AAAGACGGAATGAAAATGCCAAAGACAAAGCGAAAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTTCCACTGTTTGAATaGTCTCTGTCACTATTTTTC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILPLFE*SLSLFF
Trigger: GAAAAATAGTGACAGAGACCATTCAAACAGTGGAAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR GCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTATTGTCTTCAAGTCCTaGCTCATTTTGTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIIVFKS*LILYRK
Trigger: TTTTCTGTACAAAATGAGGCAGGACTTGAAGACAAT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGTTGGTAGCACATTTTaGGAAGTATTAGATACACTT +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIVGSTF*EVLDTL
Trigger: AAGTGTATCTAATACTTCCCAAAATGTGCTACCAAC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CCA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTTGATATATTTTCCTaGCCAGTTAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILDIFS*PVNFLG
Trigger: GCCAAGAAAATTAACTGGCCAGGAAAATATATCAAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCCGCCGCTCCAGCTCTaGCAGCCGCTCGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALPPLQL*QPLAQA
Trigger: CGCCTGGGCGAGCGGCTGCAAGAGCTGGAGCGGCGG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCCGCCGCTCCAGCTCTaGCAGCCGCTCGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGPPLQL*QPLAQA
Trigger: CGCCTGGGCGAGCGGCTGCAAGAGCTGGAGCGGCGG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCCCTCTACCCCATGGTaGACAGACACCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGPSTPW*TDTLMD
Trigger: GTCCATCAAGGTGTCTGTCAACCATGGGGTAGAGGG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCCTCTACCCCATGGTaGACAGACACCTTGATGGAC +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPSTPW*TDTLMD
Trigger: GTCCATCAAGGTGTCTGTCAACCATGGGGTAGAGGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACAGGCAGGGTTCCCATaGGCTTTGGTCTGTGGTGTA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAQAGFP*ALVCGV
Trigger: TACACCACAGACCAAAGCCAATGGGAACCCTGCCTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCCAGGCAGGGTTCCCATaGGCTTTGGTCTGTGGTGTA +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGQAGFP*ALVCGV
Trigger: TACACCACAGACCAAAGCCAATGGGAACCCTGCCTG...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACTTAGGTGTAGACGGTaGGGCACTGGTGCTACTGAA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALRCRR*GTGATE
Trigger: TTCAGTAGCACCAGTGCCCAACCGTCTACACCTAAG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTCTTTCCTTCCCATTaGGGCCTCGACCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAFFPSH*GLDHGL
Trigger: AAGACCGTGGTCGAGGCCCAAATGGGAAGGAAAGAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGGACTGGAAGATTCTTaGCTGGAAGGCCCACTGGTA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAGLEDS*LEGPLV
Trigger: TACCAGTGGGCCTTCCAGCAAAGAATCTTCCAGTCC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTTGCTGCTGGTACCTaGAAGGCTGGTTGTGACTCA +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVAAGT*KAGCDS
Trigger: TGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp GGGTGTCACAGGTGGCCCTGGCATCCCCGCTGCACTGACTTGTGCTaGATCGGAGACACTGCCTATTGGAACAACCTGAGAAAGCATTTC +
Preference number: 5 (lower is better)
Translates to: GCHRWPWHPRCTDLC*IGDTAYWNNLRKHF
Trigger: GAAATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATGCCAGGGCCACCTGTGACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGATCAGAACACAGCTTaGCTAGAGCGGTTGCTTGAC +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNADQNTA*LERLLD
Trigger: GTCAAGCAACCGCTCTAGCAAAGCTGTGTTCTGATC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTCTGACCTGGAGCTTTaGGAGGTACTGATGGAGATC +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALSDLEL*EVLMEI
Trigger: GATCTCCATCAGTACCTCCAAAAGCTCCAGGTCAGA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTCTGAGCATTCTGTGTaGTCTCACCAGTACCCTGAG +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSEHSV*SHQYPE
Trigger: CTCAGGGTACTGGTGAGACAACACAGAATGCTCAGA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTCTGAGCATTCTGTGTaGTCTCACCAGTACCCTGAG +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALSEHSV*SHQYPE
Trigger: CTCAGGGTACTGGTGAGACAACACAGAATGCTCAGA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTTCTGGTCTGGCTGGTaGTATAACATCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGFWSGW*YNISTA
Trigger: TGCTGTGGAGATGTTATACAACCAGCCAGACCAGAA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATGGTTGACAGACACCTaGATGGACACAGCTACTTCA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAWLTDT*MDTATS
Trigger: TGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGCGTTTGATTCTGGTTaGATGGTGAGGTGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALAFDSG*MVRCLG
Trigger: ACCCAAACACCTCACCATCAAACCAGAATCAAACGC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTCAAATCCCATAGGCTaGAAGGAGCTCCAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGSNPIG*KELQSK
Trigger: CTTTGACTGGAGCTCCTTCAAGCCTATGGGATTTGA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATCAAATCCCATAGGCTaGAAGGAGCTCCAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNASNPIG*KELQSK
Trigger: CTTTGACTGGAGCTCCTTCAAGCCTATGGGATTTGA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp CATCCCCGCTGCACTGACTTGTGCTGCATCGGAGACACTGCCTATTaGAACAACCTGAGAAAGCATTTCGGCACTCTCAAACGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: HPRCTDLCCIGDTAY*NNLRKHFGTLKRAG
Trigger: CCCAGCACGTTTGAGAGTGCCGAAATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGTGATACACAGTCTTaGTTAACAGGGAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGCDTQS*LTGKAA
Trigger: GGCAGCTTTCCCTGTTAACAAAGACTGTGTATCACA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGCCACTGGTAAATCAGTaGGTAGCACATTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALPLVNQ*VAHFGK
Trigger: CTTCCCAAAATGTGCTACCAACTGATTTACCAGTGG...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCCTCACAGTCACACTaGTATATGCCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPSQSH*YMPSSS
Trigger: AGAAGAAGATGGCATATACAAGTGTGACTGTGAGGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAGAGATTTCCTTTCCTaGTGGGTTGCCATATCGCTT +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNARDFLS*WVAISL
Trigger: AAGCGATATGGCAACCCACAAGGAAAGGAAATCTCT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GAAAGGATAGTGGAGAGCACTGCGTTTTTCCACACCCCAGTCTCCTaGGCTAGAGTAGCTAGGAACTGCAGTTCACAGCTGCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: ERIVESTAFFHTPVS*ARVARNCSSQLPLS
Trigger: GGAGAGTGGCAGCTGTGAACTGCAGTTCCTAGCTACTCTAGCTCAGGAGACTGGGGTGTGGAAAAACGCAGTGCTCTCCACTATCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp GGATGCTTCAAATCCCATAGGCTTGAAGGAGCTCCAGTCAAAGGATaGAGGATGCTCCTCAGTGGTCTGAACTGCTACGGCAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GCFKSHRLEGAPVKG*RMLLSGLNCYGRLF
Trigger: GAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGCTCCTTCAAGCCTATGGGATTTGAAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGAATCTGCACTTCTGTTaGAACCCAGGTTCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALNLHFC*NPGSCQ
Trigger: TTGACAAGAACCTGGGTTCAAACAGAAGTGCAGATT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAATCTGCACTTCTGTTaGAACCCAGGTTCTTGTCAA +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGNLHFC*NPGSCQ
Trigger: TTGACAAGAACCTGGGTTCAAACAGAAGTGCAGATT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAATGGAGCTGATACACTaGCTAAATGAGCTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAMELIH*LNELGK
Trigger: TTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCAT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACCTGAGAAGGTATATTaGGACTTAGGACACTTTCCA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAPEKVY*DLGHFP
Trigger: TGGAAAGTGTCCTAAGTCCAAATATACCTTCTCAGG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAGACAGTGCTACTGATTaGTTCATTAGCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNADSATD*FISILW
Trigger: CCAGAGTATGCTAATGAACAAATCAGTAGCACTGTC...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTTACAGCCTTGGTTTaGACACACAAAGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVTALV*THKGLI
Trigger: AATAAGCCCTTTGTGTGTCAAAACCAAGGCTGTAAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GCACTGACTTGTGCTGCATCGGAGACACTGCCTATTGGAACAACCTaGGAAAGCATTTCGGCACTCTCAAACGTGCTGGGAATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ALTCAASETLPIGTT*ESISALSNVLGMPA
Trigger: TGCTGGCATTCCCAGCACGTTTGAGAGTGCCGAAATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp AGGGTAACAATGGAGCTGATACACTTGCTAAATGAGCTGGGAAAATaGAAGGCGAGACATGCTGCACCTGGGCTGAACAGGCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: RVTMELIHLLNELGK*KARHAAPGLNRQGS
Trigger: GGAACCCTGCCTGTTCAGCCCAGGTGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCATTGTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACAATTAGCTTTTCACTaGGAGATGATGTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAQLAFH*EMMCKD
Trigger: GTCTTTGCACATCATCTCCAAGTGAAAAGCTAATTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCTGTCCAAGGAATTCTTaGTCACAGAGCAAACAATAC +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGCPRNS*SQSKQY
Trigger: GTATTGTTTGCTCTGTGACAAAGAATTCCTTGGACA...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCGTACGTATTATAATGTaGGGCCTCATGATCATACAG +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGVRIIM*GLMIIQ
Trigger: CTGTATGATCATGAGGCCCAACATTATAATACGTAC...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGTACGTATTATAATGTaGGGCCTCATGATCATACAG +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALVRIIM*GLMIIQ
Trigger: CTGTATGATCATGAGGCCCAACATTATAATACGTAC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCATTGCAAATTTGTGAATaGTCTTCAAGTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNALQICE*SSSPAS
Trigger: TGAGGCAGGACTTGAAGACAATTCACAAATTTGCAA...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATCTGCAGAACTTACTaGGGAAGGAAAAACTCCATT +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGICRTY*GRKNSI
Trigger: AATGGAGTTTTTCCTTCCCAAGTAAGTTCTGCAGAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGGAACTACTGAATGAATaGGAGCACAAGCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALELLNE*EHKPFS
Trigger: TGAAAATGGCTTGTGCTCCAATTCATTCAGTAGTTC...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATGCTTCAGACTTTGTaGGCATTACAGTTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGMLQTL*ALQLGK
Trigger: CTTTCCTAACTGTAATGCCAACAAAGTCTGAAGCAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGATGCTTCAGACTTTGTaGGCATTACAGTTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALMLQTL*ALQLGK
Trigger: CTTTCCTAACTGTAATGCCAACAAAGTCTGAAGCAT...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGTACGAACTGTATTTaGTTGGAAGTTCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QNREHTHVTTPPQVGAALCTNCI*LEVQRP
Trigger: AGGCCTTTGAACTTCCAACAAAATACAGTTCGTACA...CAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GAGTTATATGTTCGAGTGCATCCCTCAACCTGGCAGCTGAACTTCTaGCCTGGAGCTTTTGGAGGTACTGATGGAGATCCCAACGGACTG +
Preference number: 5 (lower is better)
Translates to: ELYVRVHPSTWQLNF*PGAFGGTDGDPNGL
Trigger: CAGTCCGTTGGGATCTCCATCAGTACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGGGATGCACTCGAACATATAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp GGAGCTCCAGTCAAAGGATGCAGGATGCTCCTCAGTGGTCTGAACTaGTACGGCAGGCTCTTCCTCTTTCCGTGTATTATTTACCACCAA +
Preference number: 5 (lower is better)
Translates to: GAPVKGCRMLLSGLN*YGRLFLFPCIIYHQ
Trigger: TTGGTGGTAAATAATACACGGAAAGAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp GCGTTCCAGCACCAAGGCTACACTTTCACACTCAGAGGTAAGGTATaGTCGAGCTTTAACGTAGCTCTGGATGGCCACTGTGTATACCTC +
Preference number: 5 (lower is better)
Translates to: AFQHQGYTFTLRGKV*SSFNVALDGHCVYL
Trigger: GAGGTATACACAGTGGCCATCCAGAGCTACGTTAAAGCTCGACCATACCTTACCTCTGAGTGTGAAAGTGTAGCCTTGGTGCTGGAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp CTCCAAAACAGAGTGAGTTCCCAAGCACAGTACATATCTCCTTGCTaGAGCTGCCGTGACAGAAAGGCAGTACACAAAACCAGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: LQNRVSSQAQYISPC*SCRDRKAVHKTRAL
Trigger: AAGCGCCCTGGTTTTGTGTACTGCCTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTGTGCTTGGGAACTCACTCTGTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAATTTCTAACGCATCTTaGCAATCCACTTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAISNAS*QSTSEI
Trigger: GATTTCAGAAGTGGATTGCAAAGATGCGTTAGAAAT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCACACAACGTAGAGAATTaGGTATTGGAAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAHNVEN*VLEDSL
Trigger: AAGAGAATCTTCCAATACCAAATTCTCTACGTTGTG...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp TCTGACGCAGAACAGGGAACACACCCATGTGACCACACCACCACAGGTCGGGGCATTTCAAGAAAGCGTTaGGCATCTTCACTATCCTTA +
Preference number: 5 (lower is better)
Translates to: SDAEQGTHPCDHTTTGRGISRKR*ASSLSL
Trigger: TAAGGATAGTGAAGATGCCAAACGCTTTCTTGAAAT...GCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCCCTGTTCTGCGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCTGACCTGGAGCTTTaGGAGGTACTGATGGAGATC +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSDLEL*EVLMEI
Trigger: GATCTCCATCAGTACCTCCAAAAGCTCCAGGTCAGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGAGGGAAGGCTGTCTGTaGGTCTGTAGAAGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVREGCL*VCRSSC
Trigger: ACAGGAACTTCTACAGACCAACAGACAGCCTTCCCT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp GGAACACACCCATGTGACCACACCACCACAGGTCGGGGCAGCACTGTGAACGCAAAACTGTTACATTCTTaGAGGGTTTTGGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: GTHPCDHTTTGRGSTVNAKLLHS*RVLEFG
Trigger: GCCAAATTCCAAAACCCTCAAAGAATGTAACAGTTT...TGCGTTCACAGTGCTGCCCCGACCTGTGGTGGTGTGGTCACATGGGTGTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCACTGCACTGAAGCTTaGAGGGGTTGGCAAACTGTA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVHCTEA*RGWQTV
Trigger: TACAGTTTGCCAACCCCTCAAAGCTTCAGTGCAGTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp CTGCCACTCTCCATCAGTGTCTCATGCGCTACCTGTACCAAGGTCTaGAATTGTTCCCACTGCTTATCTGATAGCTCAACAGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: LPLSISVSCATCTKV*NCSHCLSDSSTGRH
Trigger: GTGTCTGCCTGTTGAGCTATCAGATAAGCAGTGGGAACAATTTCAGACCTTGGTACAGGTAGCGCATGAGACACTGATGGAGAGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GACATAACTGGACCCCAGCACCTATACCTGGTTTATGCACATCTGTaGTCAGCGGCTCACCAGTGCCTTCCATGGTTAGGTTTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: DITGPQHLYLVYAHL*SAAHQCLPWLGFLA
Trigger: AGCAAGAAAACCTAACCATGGAAGGCACTGGTGAGCCGCTGATCACAGATGTGCATAAACCAGGTATAGGTGCTGGGGTCCAGTTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp AAGTGCAGCATCACCTGTTGCTGCTGGTACCTTGAAGGCTGGTTGTaGCTCAGTTTTTGTTTCCTCGGCCATGGATGGCTGTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KCSITCCCWYLEGWL*LSFCFLGHGWLFLH
Trigger: GTGAAGAAACAGCCATCCATGGCCGAGGAAACAAAAACTGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAACAGGTGATGCTGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp TTGAAGGAGCTCCAGTCAAAGGATGCAGGATGCTCCTCAGTGGTCTaGACTGCTACGGCAGGCTCTTCCTCTTTCCGTGTATTATTTACC +
Preference number: 5 (lower is better)
Translates to: LKELQSKDAGCSSVV*TATAGSSSFRVLFT
Trigger: GGTAAATAATACACGGAAAGAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGCTCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp AACAGAGTGAGTTCCCAAGCACAGTACATATCTCCTTGCTGGAGCTaGCGTGACAGAAAGGCAGTACACAAAACCAGGGCGCTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: NRVSSQAQYISPCWS*RDRKAVHKTRALFS
Trigger: TGAGAAAAGCGCCCTGGTTTTGTGTACTGCCTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTGTGCTTGGGAACTCACTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp TTACTCCAAAACAGAGTGAGTTCCCAAGCACAGTACATATCTCCTTaGTGGAGCTGCCGTGACAGAAAGGCAGTACACAAAACCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LLQNRVSSQAQYISP*WSCRDRKAVHKTRA
Trigger: CGCCCTGGTTTTGTGTACTGCCTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTGTGCTTGGGAACTCACTCTGTTTTGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTCTGGTCTGGCTGGTaGTATAACATCTCCACAGCA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVFWSGW*YNISTA
Trigger: TGCTGTGGAGATGTTATACAACCAGCCAGACCAGAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTGGTTGACAGACACCTaGATGGACACAGCTACTTCA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVWLTDT*MDTATS
Trigger: TGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGTTGTGACTCAGTTTTaGTTTCCTCGGCCATGGATG +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVVVTQF*FPRPWM
Trigger: CATCCATGGCCGAGGAAACAAAAACTGAGTCACAAC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp TCTGTGAAGAGTTATATGTTCGAGTGCATCCCTCAACCTGGCAGCTaGACTTCTGACCTGGAGCTTTTGGAGGTACTGATGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: SVKSYMFECIPQPGS*TSDLELLEVLMEIP
Trigger: TGGGATCTCCATCAGTACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGGGATGCACTCGAACATATAACTCTTCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp ACACTTTCCACTGAGGGTAACAATGGAGCTGATACACTTGCTAAATaGGCTGGGAAAATGGAAGGCGAGACATGCTGCACCTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: TLSTEGNNGADTLAK*AGKMEGETCCTWAE
Trigger: TTCAGCCCAGGTGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCATTGTTACCCTCAGTGGAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GAGATTTTCCACCAAAGCCCGAGGTTCACAATCTGGAGTCATGTCTaGCCGTGTGTTGGTATCAGGGACTGGAAGATTCTTTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EIFHQSPRFTIWSHV*PCVGIRDWKILCWK
Trigger: CTTCCAGCAAAGAATCTTCCAGTCCCTGATACCAACACACGGTCAGACATGACTCCAGATTGTGAACCTCGGGCTTTGGTGGAAAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp TTTGACAATGGTATGTTAGCTTGCCTGAGTTCAGCGGCAGAGATCTaGCCGTGTTTAGTCACAGCTGGCTCTGCTCTGTTTTTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: FDNGMLACLSSAAEI*PCLVTAGSALFFSQ
Trigger: TTGGGAGAAAAACAGAGCAGAGCCAGCTGTGACTAAACACGGCCAGATCTCTGCCGCTGAACTCAGGCAAGCTAACATACCATTGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGGCCATTTAGCCCTTTaGTTGTGCTTGGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVGHLAL*LCLGFL
Trigger: AAGAAAACCCAAGCACAACAAAAGGGCTAAATGGCC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTTAAAGGGGTTAACATaGTATGGGGCTCAAGACTGG +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVLKGLT*YGAQDW
Trigger: CCAGTCTTGAGCCCCATACAATGTTAACCCCTTTAA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCCTTTCCTTGTGGGTaGCCATATCGCTTAAAGACA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSFPCG*PYRLKT
Trigger: TGTCTTTAAGCGATATGGCAACCCACAAGGAAAGGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp GTATTATCACGGGTTTCCAGACCATTTGACAATGGTATGTTAGCTTaGCTGAGTTCAGCGGCAGAGATCTGGCCGTGTTTAGTCACAGCT +
Preference number: 5 (lower is better)
Translates to: VLSRVSRPFDNGMLA*LSSAAEIWPCLVTA
Trigger: AGCTGTGACTAAACACGGCCAGATCTCTGCCGCTGAACTCAGGCAAGCTAACATACCATTGTCAAATGGTCTGGAAACCCGTGATAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp GACTGCTACCAGCCACAGCAGCCTTATCAACATGTCTTCTGGAGCTaGAATGGGATCCTCTTTTACTTCCACTGTTTGAATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: DCYQPQQPYQHVFWS*NGILFYFHCLNGLC
Trigger: ACAGAGACCATTCAAACAGTGGAAGTAAAAGAGGATCCCATTCCAGCTCCAGAAGACATGTTGATAAGGCTGCTGTGGCTGGTAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGATGGAGCTGATACACTaGCTAAATGAGCTGGGAAAA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVMELIH*LNELGK
Trigger: TTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCAT...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCAAATGACTGGATCTaGTATTCTGAGGCCCACTTA +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSNDWI*YSEAHL
Trigger: TAAGTGGGCCTCAGAATACAAGATCCAGTCATTTGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGGACAGTGCTACTGATTaGTTCATTAGCATACTCTGG +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVDSATD*FISILW
Trigger: CCAGAGTATGCTAATGAACAAATCAGTAGCACTGTC...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGGTTGCTGCTGGTACCTaGAAGGCTGGTTGTGACTCA +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLVAAGT*KAGCDS
Trigger: TGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAAC...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GCTTCTCCATCTCGCTCTGAGAACGGTACACCTTACCACAACCTGTaGACTTGCACGTGTACGTATTATAATGTTGGGCCTCATGATCAT +
Preference number: 5 (lower is better)
Translates to: ASPSRSENGTPYHNL*TCTCTYYNVGPHDH
Trigger: ATGATCATGAGGCCCAACATTATAATACGTACACGTGCAAGTTCACAGGTTGTGGTAAGGTGTACCGTTCTCAGAGCGAGATGGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp ACACATGACTGCTACCAGCCACAGCAGCCTTATCAACATGTCTTCTaGAGCTGGAATGGGATCCTCTTTTACTTCCACTGTTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: THDCYQPQQPYQHVF*SWNGILFYFHCLNG
Trigger: ACCATTCAAACAGTGGAAGTAAAAGAGGATCCCATTCCAGCTCCAGAAGACATGTTGATAAGGCTGCTGTGGCTGGTAGCAGTCATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTGTCCAAGGAATTCTTaGTCACAGAGCAAACAATAC +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVCPRNS*SQSKQY
Trigger: GTATTGTTTGCTCTGTGACAAAGAATTCCTTGGACA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCTTTGCTCTAAAGACTaGATGCTCCTTTCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLCSKD*MLLSVG
Trigger: GCCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAAG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAGGGAAGGCTGTCTGTaGGTCTGTAGAAGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLREGCL*VCRSSC
Trigger: ACAGGAACTTCTACAGACCAACAGACAGCCTTCCCT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGTCTTTCGCTTTGTCTTaGGCATTTTCATTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVSFALS*AFSFRL
Trigger: AAGACGGAATGAAAATGCCAAAGACAAAGCGAAAGA...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCCCTTTAAAGTGGTATaGCCTTGGTTTTCTGCATTT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVPFKVV*PWFSAF
Trigger: AAATGCAGAAAACCAAGGCAATACCACTTTAAAGGG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp ATTGGTCCGAAGAACAGTAGTATTATCACGGGTTTCCAGACCATTTaGCAATGGTATGTTAGCTTGCCTGAGTTCAGCGGCAGAGATCTG +
Preference number: 5 (lower is better)
Translates to: IGPKNSSIITGFQTI*QWYVSLPEFSGRDL
Trigger: CAGATCTCTGCCGCTGAACTCAGGCAAGCTAACATACCATTGTCAAATGGTCTGGAAACCCGTGATAATACTACTGTTCTTCGGACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp CGACACCTTTCCAGGTACACTTGTACTGATGGTTCCACCCTTTGCTaGAATTTACTCCAAAACAGAGTGAGTTCCCAAGCACAGTACATA +
Preference number: 5 (lower is better)
Translates to: RHLSRYTCTDGSTLC*NLLQNRVSSQAQYI
Trigger: TATGTACTGTGCTTGGGAACTCACTCTGTTTTGGAGTAAATTGCAGCAAAGGGTGGAACCATCAGTACAAGTGTACCTGGAAAGGTGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp GAGTGGCATATATCCTGTCACAGCCCTCACAGTCACACTTGTATATaGCATCTTCTTCTGCCTTACTTGTCCTTGTTCCAATTCCATGGT +
Preference number: 5 (lower is better)
Translates to: EWHISCHSPHSHTCI*HLLLPYLSLFQFHG
Trigger: ACCATGGAATTGGAACAAGGACAAGTAAGGCAGAAGAAGATGGCATATACAAGTGTGACTGTGAGGGCTGTGACAGGATATATGCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCCTCCACATTCAAACTaGCAAATTTGTGAATTGTCT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVPPHSN*QICELS
Trigger: AGACAATTCACAAATTTGCAAGTTTGAATGTGGAGG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp ACGAGTGGAGGATGGCAAATTCACAGAGCAGAGTGCTGTAATGTGCCTACCGTGCAATCTGCACTACTTTaGCGCTCTTGTTTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: TSGGWQIHRAECCNVPTVQSALL*RSCFLN
Trigger: ATTTAGAAAACAAGAGCGCAAAAGTAGTGCAGATTG...CACGGTAGGCACATTACAGCACTCTGCTCTGTGAATTTGCCATCCTCCACTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGATACTGCATGTAGGCTaGCCAATTCCTAAACCTAGC +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLILHVG*PIPKPS
Trigger: GCTAGGTTTAGGAATTGGCAAGCCTACATGCAGTAT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTCTTTCCTTCCCATTaGGGCCTCGACCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIFFPSH*GLDHGL
Trigger: AAGACCGTGGTCGAGGCCCAAATGGGAAGGAAAGAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp AGAGGCAAACTGTTACATTCTTTGAGGGTTTTGGAATTTGGCGTTTaGTTCTGGTTTGATGGTGAGGTGTTTGGGTGGCAAACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RGKLLHSLRVLEFGV*FWFDGEVFGWQTVC
Trigger: ACAGACTGTTTGCCACCCAAACACCTCACCATCAAACCAGAATCAAACGCCAAATTCCAAAACCCTCAAAGAATGTAACAGTTTGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp AATGCTTCAGACTTTGTTGGCATTACAGTTAGGAAAGAGGAGCACTaGGAAGCATCAGGCAGCTTGTTATCTGGGATAGAGTTTACTGAG +
Preference number: 5 (lower is better)
Translates to: NASDFVGITVRKEEH*EASGSLLSGIEFTE
Trigger: CTCAGTAAACTCTATCCCAGATAACAAGCTGCCTGATGCTTCTCAGTGCTCCTCTTTCCTAACTGTAATGCCAACAAAGTCTGAAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp CCAACTGATCACATGGAAATTTGCCAACATCCACAGCAGCAGTCATaGTTTCAATTTCCTCGGGGGTCATTTCATGAAGTTTCATGTAGT +
Preference number: 5 (lower is better)
Translates to: PTDHMEICQHPQQQS*FQFPRGSFHEVSCS
Trigger: ACTACATGAAACTTCATGAAATGACCCCCGAGGAAATTGAAAGCATGACTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATCAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp TATTCTCACTGTCTGCTGGTGAAGAGAAGAGAGAGCTATTTTCTGTaGGTAAAGGAAGAAACGGATCTGAGCCGCTGTCAATATTCAAAG +
Preference number: 5 (lower is better)
Translates to: YSHCLLVKRRESYFL*VKEETDLSRCQYSK
Trigger: CTTTGAATATTGACAGCGGCTCAGATCCGTTTCTTCCTTTACCCACAGAAAATAGCTCTCTCTTCTCTTCACCAGCAGACAGTGAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGATCAGAACACAGCTTaGCTAGAGCGGTTGCTTGAC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIDQNTA*LERLLD
Trigger: GTCAAGCAACCGCTCTAGCAAAGCTGTGTTCTGATC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCTTTGCTCTAAAGACTaGATGCTCCTTTCGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIILCSKD*MLLSVG
Trigger: GCCCACCGAAAGGAGCATCAAGTCTTTAGAGCAAAG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGAAGTCCTGCCTCATTTaGTACAGAAAAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLKSCLI*YRKGHQ
Trigger: CTGATGACCTTTTCTGTACAAAATGAGGCAGGACTT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTCAAATGACTGGATCTaGTATTCTGAGGCCCACTTA +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSNDWI*YSEAHL
Trigger: TAAGTGGGCCTCAGAATACAAGATCCAGTCATTTGA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCACTGCACTGAAGCTTaGAGGGGTTGGCAAACTGTA +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIHCTEA*RGWQTV
Trigger: TACAGTTTGCCAACCCCTCAAAGCTTCAGTGCAGTG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGCTTTGCTAGAGCGGTaGCTTGACTTAACTGATTGG +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIALLER*LDLTDW
Trigger: CCAATCAGTTAAGTCAAGCAACCGCTCTAGCAAAGC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTTGCAAATTTGTGAATaGTCTTCAAGTCCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLLQICE*SSSPAS
Trigger: TGAGGCAGGACTTGAAGACAATTCACAAATTTGCAA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGATCTGCAGAACTTACTaGGGAAGGAAAAACTCCATT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLICRTY*GRKNSI
Trigger: AATGGAGTTTTTCCTTCCCAAGTAAGTTCTGCAGAT...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGTTGTGACTCAGTTTTaGTTTCCTCGGCCATGGATG +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIVVTQF*FPRPWM
Trigger: CATCCATGGCCGAGGAAACAAAAACTGAGTCACAAC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTGTACGAACTGTATTTaGTTGGAAGTTCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLCTNCI*LEVQRP
Trigger: AGGCCTTTGAACTTCCAACAAAATACAGTTCGTACA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGTCTTTCGCTTTGTCTTaGGCATTTTCATTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLSFALS*AFSFRL
Trigger: AAGACGGAATGAAAATGCCAAAGACAAAGCGAAAGA...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCCCTTTAAAGTGGTATaGCCTTGGTTTTCTGCATTT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLPFKVV*PWFSAF
Trigger: AAATGCAGAAAACCAAGGCAATACCACTTTAAAGGG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp GCCCCTTCAGTCTCTGAATTAATAACTTTAATCAGGAAGAAAATGTaGTACACAGTCTTTGTTAACAGGGAAAGCTGCCGACACCTTTCC +
Preference number: 5 (lower is better)
Translates to: APSVSELITLIRKKM*YTVFVNRESCRHLS
Trigger: GGAAAGGTGTCGGCAGCTTTCCCTGTTAACAAAGACTGTGTATCACATTTTCTTCCTGATTAAAGTTATTAATTCAGAGACTGAAGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp CTTACAAAGTGCCTTCTACAGTACTGGCAAATGACTTTCTTGCTTTaGATTTCAAGAAAGCGTTTGGCATCTTCACTATCCTTATGGCCT +
Preference number: 5 (lower is better)
Translates to: LTKCLLQYWQMTFLL*ISRKRLASSLSLWP
Trigger: AGGCCATAAGGATAGTGAAGATGCCAAACGCTTTCTTGAAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTAGAAGGCACTTTGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp TTTTATCATACATGGATACTGTGTCACAAATTTGCTTGTACACTCTaGCAAGGCATCATTCCTAGCCTTTATGGAATACACGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FYHTWILCHKFACTL*QGIIPSLYGIHVLP
Trigger: GGGAAGCACGTGTATTCCATAAAGGCTAGGAATGATGCCTTGGCAGAGTGTACAAGCAAATTTGTGACACAGTATCCATGTATGATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp GCTCAGGTATGTTGTAAAAGACAACTTACACTCCAACTGATCACATaGAAATTTGCCAACATCCACAGCAGCAGTCATGCTTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: AQVCCKRQLTLQLIT*KFANIHSSSHAFNF
Trigger: GAAATTGAAAGCATGACTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATCAGTTGGAGTGTAAGTTGTCTTTTACAACATACCTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTGTGATACACAGTCTTaGTTAACAGGGAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIICDTQS*LTGKAA
Trigger: GGCAGCTTTCCCTGTTAACAAAGACTGTGTATCACA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCACAACGTAGAGAATTaGGTATTGGAAGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLHNVEN*VLEDSL
Trigger: AAGAGAATCTTCCAATACCAAATTCTCTACGTTGTG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTATACTGCATGTAGGCTaGCCAATTCCTAAACCTAGC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIILHVG*PIPKPS
Trigger: GCTAGGTTTAGGAATTGGCAAGCCTACATGCAGTAT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCCACTGGTAAATCAGTaGGTAGCACATTTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIPLVNQ*VAHFGK
Trigger: CTTCCCAAAATGTGCTACCAACTGATTTACCAGTGG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCCCTCACAGTCACACTaGTATATGCCATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIPSQSH*YMPSSS
Trigger: AGAAGAAGATGGCATATACAAGTGTGACTGTGAGGG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CAAACCACCACCTGGCATATTTACACTGCGCCACTACTACTTTCTATCACATTGCAATCTGCACTACTTTaGCGCTCTTGTTTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: QTTTWHIYTAPLLLSITLQSALL*RSCFLN
Trigger: ATTTAGAAAACAAGAGCGCAAAAGTAGTGCAGATTG...CAATGTGATAGAAAGTAGTAGTGGCGCAGTGTAAATATGCCAGGTGGTGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAGAGATTTCCTTTCCTaGTGGGTTGCCATATCGCTT +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIRDFLS*WVAISL
Trigger: AAGCGATATGGCAACCCACAAGGAAAGGAAATCTCT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp ATGCCAGCAGTTTCTAAAGCCTGCTTAATAATTTCACTGCCTTCCTaGCTAACACTGGCATTAAAGTTACTCACGTCACATCTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: MPAVSKACLIISLPS*LTLALKLLTSHLGN
Trigger: ATTTCCAAGATGTGACGTGAGTAACTTTAATGCCAGTGTTAGTCAGGAAGGCAGTGAAATTATTAAGCAGGCTTTAGAAACTGCTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAAGTCCTGCCTCATTTaGTACAGAAAAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIKSCLI*YRKGHQ
Trigger: CTGATGACCTTTTCTGTACAAAATGAGGCAGGACTT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTTTTAAAAGCAGCATATaGGTCAGGGTGTGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIFKSSI*VRVCCL
Trigger: AAGACAGCACACCCTGACCAATATGCTGCTTTTAAA...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp TGGGTTGCCATATCGCTTAAAGACAATAAGAATGTTGCGGTGTTGTaGTGTAAATGCCCTGGACAACTTATGACACTTATAATGTCTGAT +
Preference number: 5 (lower is better)
Translates to: WVAISLKDNKNVAVL*CKCPGQLMTLIMSD
Trigger: ATCAGACATTATAAGTGTCATAAGTTGTCCAGGGCATTTACATCACAACACCGCAACATTCTTATTGTCTTTAAGCGATATGGCAACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp CATCACCCTCTGACTCTAAGTTACAGATCATTTCTAACGCATCTTTaGAATCCACTTCTGAAATCTCTTCAATTAGCTTTTCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: HHPLTLSYRSFLTHL*NPLLKSLQLAFHLE
Trigger: CTCCAAGTGAAAAGCTAATTGAAGAGATTTCAGAAGTGGATTGCAAAGATGCGTTAGAAATGATCTGTAACTTAGAGTCAGAGGGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 90 bp CTTTTACTTCCACTGTTTGAATGGTCTCTGTCACTATTTTTCTTCTaGTTCACTGCAGACTCTTCAAGAAACTTCAGAAAGGATGCTTCA +
Preference number: 5 (lower is better)
Translates to: LLLPLFEWSLSLFFF*FTADSSRNFRKDAS
Trigger: TGAAGCATCCTTTCTGAAGTTTCTTGAAGAGTCTGCAGTGAAGCAGAAGAAAAATAGTGACAGAGACCATTCAAACAGTGGAAGTAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCAATTAGCTTTTCACTaGGAGATGATGTGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIQLAFH*EMMCKD
Trigger: GTCTTTGCACATCATCTCCAAGTGAAAAGCTAATTG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTGAACTACTGAATGAATaGGAGCACAAGCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIELLNE*EHKPFS
Trigger: TGAAAATGGCTTGTGCTCCAATTCATTCAGTAGTTC...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp TTTTCCATTTGTGAACATAATATGCCATCTTGTCCATGTTTATCCTaGGAAGGTATATTTGGACTTAGGACACTTTCCACTGAGGGTAAC +
Preference number: 5 (lower is better)
Translates to: FSICEHNMPSCPCLS*EGIFGLRTLSTEGN
Trigger: GTTACCCTCAGTGGAAAGTGTCCTAAGTCCAAATATACCTTCTCAGGATAAACATGGACAAGATGGCATATTATGTTCACAAATGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp ATTAGGCCAGTAATTGCTTGGAAAATCCTAGAACAGTCACTCACCTaGCACCTAAATTCTTTCATTGATTGTTTCGGTTCAGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IRPVIAWKILEQSLT*HLNSFIDCFGSVSS
Trigger: TGAAGAAACTGAACCGAAACAATCAATGAAAGAATTTAGGTGTCAGGTGAGTGACTGTTCTAGGATTTTCCAAGCAATTACTGGCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp AAATTACCAGGCTTTTGTCTTTCTGATGTGCAGGAATCATGCTCCTaGAATTCGTTATTTCCCTTTAAAGTGGTATTGCCTTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: KLPGFCLSDVQESCS*NSLFPFKVVLPWFS
Trigger: AGAAAACCAAGGCAATACCACTTTAAAGGGAAATAACGAATTTCAGGAGCATGATTCCTGCACATCAGAAAGACAAAAGCCTGGTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTATTTCTAACGCATCTTaGCAATCCACTTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIISNAS*QSTSEI
Trigger: GATTTCAGAAGTGGATTGCAAAGATGCGTTAGAAAT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTCCTCCACATTCAAACTaGCAAATTTGTGAATTGTCT +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIPPHSN*QICELS
Trigger: AGACAATTCACAAATTTGCAAGTTTGAATGTGGAGG...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS-3UTR CAA 90 bp CGTTCATGGAAAGGACAACTGGGTGACAGAAATTTGAGGCTTAACTCAATTATTAAACTGTTACATTCTTaGAGGGTTTTGGAATTTGGC +
Preference number: 5 (lower is better)
Translates to: RSWKGQLGDRNLRLNSIIKLLHS*RVLEFG
Trigger: GCCAAATTCCAAAACCCTCAAAGAATGTAACAGTTT...AATAATTGAGTTAAGCCTCAAATTTCTGTCACCCAGTTGTCCTTTCCATGAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 90 bp AGCTTCACTTTCCTCTTCAACCTCTGCAGAAAATGTAGGAAGATTTaGTTTATGTACAGCCTGGTAATGAAGAATCAAGTTTTGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SFTFLFNLCRKCRKI*FMYSLVMKNQVLLY
Trigger: ATACAGCAAAACTTGATTCTTCATTACCAGGCTGTACATAAATCAAATCTTCCTACATTTTCTGCAGAGGTTGAAGAGGAAAGTGAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 90 bp CTTGATATATTTTCCTGGCCAGTTAATTTTCTTGGCCGAATCAGATaGGCTTTATGCTTGTCATTATGTTTATTAAAGATGTGTCGGAGA +
Preference number: 5 (lower is better)
Translates to: LDIFSWPVNFLGRIR*ALCLSLCLLKMCRR
Trigger: TCTCCGACACATCTTTAATAAACATAATGACAAGCATAAAGCCCATCTGATTCGGCCAAGAAAATTAACTGGCCAGGAAAATATATCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp AGGGTGTCACAGGTGGCCCTGGCATCCCCGCTGCACTaGCTTGTGCTGCATCGGAGACACTGCCTATTGGAA +
Preference number: 6 (lower is better)
Translates to: RVSQVALASPLH*LVLHRRHCLLE
Trigger: TTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATGCCAGGGCCACCTGTGACACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TGTCACAGGTGGCCCTGGCATCCCCGCTGCACTGACTaGTGCTGCATCGGAGACACTGCCTATTGGAACAAC +
Preference number: 6 (lower is better)
Translates to: CHRWPWHPRCTD*CCIGDTAYWNN
Trigger: GTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGCAGCGGGGATGCCAGGGCCACCTGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp AGGAGCTCCAGTCAAAGGATGCAGGATGCTCCTCAGTaGTCTGAACTGCTACGGCAGGCTCTTCCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: RSSSQRMQDAPQ*SELLRQALPLS
Trigger: GGAAAGAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GTGGAGAGCACTGCGTTTTTCCACACCCCAGTCTCCTaGGCTAGAGTAGCTAGGAACTGCAGTTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: VESTAFFHTPVS*ARVARNCSSQL
Trigger: CAGCTGTGAACTGCAGTTCCTAGCTACTCTAGCTCAGGAGACTGGGGTGTGGAAAAACGCAGTGCTCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GTTCGAGTGCATCCCTCAACCTGGCAGCTGAACTTCTaGCCTGGAGCTTTTGGAGGTACTGATGGAGATCCC +
Preference number: 6 (lower is better)
Translates to: VRVHPSTWQLNF*PGAFGGTDGDP
Trigger: GGGATCTCCATCAGTACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGGGATGCACTCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp CTCCAGTCAAAGGATGCAGGATGCTCCTCAGTGGTCTaGACTGCTACGGCAGGCTCTTCCTCTTTCCGTGTA +
Preference number: 6 (lower is better)
Translates to: LQSKDAGCSSVV*TATAGSSSFRV
Trigger: TACACGGAAAGAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp AGTTCCCAAGCACAGTACATATCTCCTTGCTGGAGCTaGCGTGACAGAAAGGCAGTACACAAAACCAGGGCG +
Preference number: 6 (lower is better)
Translates to: SSQAQYISPCWS*RDRKAVHKTRA
Trigger: CGCCCTGGTTTTGTGTACTGCCTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTGTGCTTGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp AAATCCCATAGGCTTGAAGGAGCTCCAGTCAAAGGATaGAGGATGCTCCTCAGTGGTCTGAACTGCTACGGC +
Preference number: 6 (lower is better)
Translates to: KSHRLEGAPVKG*RMLLSGLNCYG
Trigger: GCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGACTGGAGCTCCTTCAAGCCTATGGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp GGTATGTTAGCTTGCCTGAGTTCAGCGGCAGAGATCTaGCCGTGTTTAGTCACAGCTGGCTCTGCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: GMLACLSSAAEI*PCLVTAGSALF
Trigger: AAACAGAGCAGAGCCAGCTGTGACTAAACACGGCCAGATCTCTGCCGCTGAACTCAGGCAAGCTAACATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp TGTGCTGCATCGGAGACACTGCCTATTGGAACAACCTaGGAAAGCATTTCGGCACTCTCAAACGTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: CAASETLPIGTT*ESISALSNVLG
Trigger: TCCCAGCACGTTTGAGAGTGCCGAAATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp ATCACCTGTTGCTGCTGGTACCTTGAAGGCTGGTTGTaGCTCAGTTTTTGTTTCCTCGGCCATGGATGGCTG +
Preference number: 6 (lower is better)
Translates to: ITCCCWYLEGWL*LSFCFLGHGWL
Trigger: CAGCCATCCATGGCCGAGGAAACAAAAACTGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAACAGGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp AGCGGCTCACCAGTGCCTTCCATGGTTAGGTTTTCTTaGTTTCCAAAGTCACCCTCTACCCCATGGTTGACA +
Preference number: 6 (lower is better)
Translates to: SGSPVPSMVRFS*FPKSPSTPWLT
Trigger: TGTCAACCATGGGGTAGAGGGTGACTTTGGAAAGCAAGAAAACCTAACCATGGAAGGCACTGGTGAGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp TTCAGCGGCAGAGATCTGGCCGTGTTTAGTCACAGCTaGCTCTGCTCTGTTTTTCTCCCAATCTGCACTTCT +
Preference number: 6 (lower is better)
Translates to: FSGRDLAVFSHS*LCSVFLPICTS
Trigger: AGAAGTGCAGATTGGGAGAAAAACAGAGCAGAGCCAGCTGTGACTAAACACGGCCAGATCTCTGCCGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp ATGGAGCTGATACACTTGCTAAATGAGCTGGGAAAATaGAAGGCGAGACATGCTGCACCTGGGCTGAACAGG +
Preference number: 6 (lower is better)
Translates to: MELIHLLNELGK*KARHAAPGLNR
Trigger: CCTGTTCAGCCCAGGTGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GCACTTGTGGAGAGAATCATGCTAGCTAGGAGGGAAGGCTGTCTGTaGGTCTGTAGAAGTTCCTGTGCTATTTCTGCTCCATCCAGTGGT +
Preference number: 6 (lower is better)
Translates to: ALVERIMLARREGCL*VCRSSCAISAPSSG
Trigger: ACCACTGGATGGAGCAGAAATAGCACAGGAACTTCTACAGACCAACAGACAGCCTTCCCTCCTAGCTAGCATGATTCTCTCCACAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp CGGGTTTCCAGACCATTTGACAATGGTATGTTAGCTTaGCTGAGTTCAGCGGCAGAGATCTGGCCGTGTTTA +
Preference number: 6 (lower is better)
Translates to: RVSRPFDNGMLA*LSSAAEIWPCL
Trigger: TAAACACGGCCAGATCTCTGCCGCTGAACTCAGGCAAGCTAACATACCATTGTCAAATGGTCTGGAAACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp GTCAAAGGATGCAGGATGCTCCTCAGTGGTCTGAACTaGTACGGCAGGCTCTTCCTCTTTCCGTGTATTATT +
Preference number: 6 (lower is better)
Translates to: VKGCRMLLSGLN*YGRLFLFPCII
Trigger: AATAATACACGGAAAGAGGAAGAGCCTGCCGTAGCAGTTCAGACCACTGAGGAGCATCCTGCATCCTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp CACCAAGGCTACACTTTCACACTCAGAGGTAAGGTATaGTCGAGCTTTAACGTAGCTCTGGATGGCCACTGT +
Preference number: 6 (lower is better)
Translates to: HQGYTFTLRGKV*SSFNVALDGHC
Trigger: ACAGTGGCCATCCAGAGCTACGTTAAAGCTCGACCATACCTTACCTCTGAGTGTGAAAGTGTAGCCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp CCAAAGTCACCCTCTACCCCATGGTTGACAGACACCTaGATGGACACAGCTACTTCATTGGTCCGAAGAACA +
Preference number: 6 (lower is better)
Translates to: PKSPSTPWLTDT*MDTATSLVRRT
Trigger: TGTTCTTCGGACCAATGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCATGGGGTAGAGGGTGACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp CTGACCGTGTGTTGGTATCAGGGACTGGAAGATTCTTaGCTGGAAGGCCCACTGGTAAATCAGTTGGTAGCA +
Preference number: 6 (lower is better)
Translates to: LTVCWYQGLEDS*LEGPLVNQLVA
Trigger: TGCTACCAACTGATTTACCAGTGGGCCTTCCAGCAAAGAATCTTCCAGTCCCTGATACCAACACACGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GAGTCATGTCTGACCGTGTGTTGGTATCAGGGACTGGAAGATTCTTaGCTGGAAGGCCCACTGGTAAATCAGTTGGTAGCACATTTTGGG +
Preference number: 6 (lower is better)
Translates to: ESCLTVCWYQGLEDS*LEGPLVNQLVAHFG
Trigger: CCCAAAATGTGCTACCAACTGATTTACCAGTGGGCCTTCCAGCAAAGAATCTTCCAGTCCCTGATACCAACACACGGTCAGACATGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp AGTTATATGTTCGAGTGCATCCCTCAACCTGGCAGCTaGACTTCTGACCTGGAGCTTTTGGAGGTACTGATG +
Preference number: 6 (lower is better)
Translates to: SYMFECIPQPGS*TSDLELLEVLM
Trigger: CATCAGTACCTCCAAAAGCTCCAGGTCAGAAGTTCAGCTGCCAGGTTGAGGGATGCACTCGAACATATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp ACTGAGGGTAACAATGGAGCTGATACACTTGCTAAATaGGCTGGGAAAATGGAAGGCGAGACATGCTGCACC +
Preference number: 6 (lower is better)
Translates to: TEGNNGADTLAK*AGKMEGETCCT
Trigger: GGTGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCATTGTTACCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp AACAGAGTGAGTTCCCAAGCACAGTACATATCTCCTTaGTGGAGCTGCCGTGACAGAAAGGCAGTACACAAA +
Preference number: 6 (lower is better)
Translates to: NRVSSQAQYISP*WSCRDRKAVHK
Trigger: TTTGTGTACTGCCTTTCTGTCACGGCAGCTCCAGCAAGGAGATATGTACTGTGCTTGGGAACTCACTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp TGCACTGACTTGTGCTGCATCGGAGACACTGCCTATTaGAACAACCTGAGAAAGCATTTCGGCACTCTCAAA +
Preference number: 6 (lower is better)
Translates to: CTDLCCIGDTAY*NNLRKHFGTLK
Trigger: TTTGAGAGTGCCGAAATGCTTTCTCAGGTTGTTCCAATAGGCAGTGTCTCCGATGCAGCACAAGTCAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp GGACCCTCAAAAGCTTTCTCTTTATCCAGTGGTTCCTaGGAAAGGATAGTGGAGAGCACTGCGTTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: GPSKAFSLSSGS*ERIVESTAFFH
Trigger: GTGGAAAAACGCAGTGCTCTCCACTATCCTTTCCCAGGAACCACTGGATAAAGAGAAAGCTTTTGAGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098163.9
CDS CAA 72 bp TTAGCAAGTGCAGCATCACCTGTTGCTGCTGGTACCTaGAAGGCTGGTTGTGACTCAGTTTTTGTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: LASAASPVAAGT*KAGCDSVFVSS
Trigger: CGAGGAAACAAAAACTGAGTCACAACCAGCCTTCAAGGTACCAGCAGCAACAGGTGATGCTGCACTTGCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GACTTAGGACACTTTCCACTGAGGGTAACAATGGAGCTGATACACTaGCTAAATGAGCTGGGAAAATGGAAGGCGAGACATGCTGCACCT +
Preference number: 6 (lower is better)
Translates to: DLGHFPLRVTMELIH*LNELGKWKARHAAP
Trigger: AGGTGCAGCATGTCTCGCCTTCCATTTTCCCAGCTCATTTAGCAAGTGTATCAGCTCCATTGTTACCCTCAGTGGAAAGTGTCCTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp ATGAATTTCCCATCTCTGATAATCGCAGGCCATTTAGCCCTTTTGTaGTGCTTGGGTTTTCTTTCCTTCCCATTTGGGCCTCGACCACGG +
Preference number: 6 (lower is better)
Translates to: MNFPSLIIAGHLALL*CLGFLSFPFGPRPR
Trigger: CCGTGGTCGAGGCCCAAATGGGAAGGAAAGAAAACCCAAGCACAACAAAAGGGCTAAATGGCCTGCGATTATCAGAGATGGGAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GGAAAGCTGCCGACACCTTTCCAGGTACACTTGTACTaGTGGTTCCACCCTTTGCTGCAATTTACTCCAAAA +
Preference number: 6 (lower is better)
Translates to: GKLPTPFQVHLY*WFHPLLQFTPK
Trigger: TTTTGGAGTAAATTGCAGCAAAGGGTGGAACCATCAGTACAAGTGTACCTGGAAAGGTGTCGGCAGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp TCTCGCTCTGAGAACGGTACACCTTACCACAACCTGTaGACTTGCACGTGTACGTATTATAATGTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SRSENGTPYHNL*TCTCTYYNVGP
Trigger: AGGCCCAACATTATAATACGTACACGTGCAAGTTCACAGGTTGTGGTAAGGTGTACCGTTCTCAGAGCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GGAGATCCCAACGGACTGCTTAGGTCGGGCTGTGACTaGACAAATGTGATACTTTCTAGTGTCTTAAGAGGT +
Preference number: 6 (lower is better)
Translates to: GDPNGLLRSGCD*TNVILSSVLRG
Trigger: ACCTCTTAAGACACTAGAAAGTATCACATTTGTTCAGTCACAGCCCGACCTAAGCAGTCCGTTGGGATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TCTACCCCATGGTTGACAGACACCTTGATGGACACAGCTACTTCATaGGTCCGAAGAACAGTAGTATTATCACGGGTTTCCAGACCATTT +
Preference number: 6 (lower is better)
Translates to: STPWLTDTLMDTATS*VRRTVVLSRVSRPF
Trigger: AAATGGTCTGGAAACCCGTGATAATACTACTGTTCTTCGGACCAATGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCATGGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TCTTGCTTTCCAAAGTCACCCTCTACCCCATGGTTGACAGACACCTaGATGGACACAGCTACTTCATTGGTCCGAAGAACAGTAGTATTA +
Preference number: 6 (lower is better)
Translates to: SCFPKSPSTPWLTDT*MDTATSLVRRTVVL
Trigger: TAATACTACTGTTCTTCGGACCAATGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCATGGGGTAGAGGGTGACTTTGGAAAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp TCCATCAGTGTCTCATGCGCTACCTGTACCAAGGTCTaGAATTGTTCCCACTGCTTATCTGATAGCTCAACA +
Preference number: 6 (lower is better)
Translates to: SISVSCATCTKV*NCSHCLSDSST
Trigger: TGTTGAGCTATCAGATAAGCAGTGGGAACAATTTCAGACCTTGGTACAGGTAGCGCATGAGACACTGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp TCCAGGTACACTTGTACTGATGGTTCCACCCTTTGCTaGAATTTACTCCAAAACAGAGTGAGTTCCCAAGCA +
Preference number: 6 (lower is better)
Translates to: SRYTCTDGSTLC*NLLQNRVSSQA
Trigger: TGCTTGGGAACTCACTCTGTTTTGGAGTAAATTGCAGCAAAGGGTGGAACCATCAGTACAAGTGTACCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp AGGCTGGTTGTGACTCAGTTTTTGTTTCCTCGGCCATaGATGGCTGTTTCTTCACTTGATTATTCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: RLVVTQFLFPRP*MAVSSLDYSVE
Trigger: CTCCACAGAATAATCAAGTGAAGAAACAGCCATCCATGGCCGAGGAAACAAAAACTGAGTCACAACCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TGGTTGACAGACACCTTGATGGACACAGCTACTTCATaGGTCCGAAGAACAGTAGTATTATCACGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: WLTDTLMDTATS*VRRTVVLSRVS
Trigger: GGAAACCCGTGATAATACTACTGTTCTTCGGACCAATGAAGTAGCTGTGTCCATCAAGGTGTCTGTCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp AATTTGGCGTTTGATTCTGGTTTGATGGTGAGGTGTTaGGGTGGCAAACAGTCTGTAACAAGGGTGTCACAG +
Preference number: 6 (lower is better)
Translates to: NLAFDSGLMVRC*GGKQSVTRVSQ
Trigger: CTGTGACACCCTTGTTACAGACTGTTTGCCACCCAAACACCTCACCATCAAACCAGAATCAAACGCCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp GGTGGACACAGCAGTAAGGTCTGTACGAACTGTATTTaGTTGGAAGTTCAAAGGCCTGGGAAACTGGATTCT +
Preference number: 6 (lower is better)
Translates to: GGHSSKVCTNCI*LEVQRPGKLDS
Trigger: AGAATCCAGTTTCCCAGGCCTTTGAACTTCCAACAAAATACAGTTCGTACAGACCTTACTGCTGTGTCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp GTGGCATATATCCTGTCACAGCCCTCACAGTCACACTaGTATATGCCATCTTCTTCTGCCTTACTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: VAYILSQPSQSH*YMPSSSALLVL
Trigger: AAGGACAAGTAAGGCAGAAGAAGATGGCATATACAAGTGTGACTGTGAGGGCTGTGACAGGATATATGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TTAGACCGAGTGGCATATATCCTGTCACAGCCCTCACAGTCACACTaGTATATGCCATCTTCTTCTGCCTTACTTGTCCTTGTTCCAATT +
Preference number: 6 (lower is better)
Translates to: LDRVAYILSQPSQSH*YMPSSSALLVLVPI
Trigger: AATTGGAACAAGGACAAGTAAGGCAGAAGAAGATGGCATATACAAGTGTGACTGTGAGGGCTGTGACAGGATATATGCCACTCGGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp AAGAACAGTAGTATTATCACGGGTTTCCAGACCATTTaGCAATGGTATGTTAGCTTGCCTGAGTTCAGCGGC +
Preference number: 6 (lower is better)
Translates to: KNSSIITGFQTI*QWYVSLPEFSG
Trigger: GCCGCTGAACTCAGGCAAGCTAACATACCATTGTCAAATGGTCTGGAAACCCGTGATAATACTACTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp CACATGGAAATTTGCCAACATCCACAGCAGCAGTCATaGTTTCAATTTCCTCGGGGGTCATTTCATGAAGTT +
Preference number: 6 (lower is better)
Translates to: HMEICQHPQQQS*FQFPRGSFHEV
Trigger: AACTTCATGAAATGACCCCCGAGGAAATTGAAAGCATGACTGCTGCTGTGGATGTTGGCAAATTTCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp CAAAGATTTCACTGTCTTTACAGGAACACACATGACTaGTACCAGCCACAGCAGCCTTATCAACATGTCTTC +
Preference number: 6 (lower is better)
Translates to: QRFHCLYRNTHD*YQPQQPYQHVF
Trigger: GAAGACATGTTGATAAGGCTGCTGTGGCTGGTAGCAGTCATGTGTGTTCCTGTAAAGACAGTGAAATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp GGGGACAGTGCTACTGATTTGTTCATTAGCATACTCTaGGAAGCTGGAGCAGAGGTGTCATTTTCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: GDSATDLFISIL*EAGAEVSFSSF
Trigger: AAAACTAGAAAATGACACCTCTGCTCCAGCTTCCCAGAGTATGCTAATGAACAAATCAGTAGCACTGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp ACAGCAGCCTTATCAACATGTCTTCTGGAGCTGGAATaGGATCCTCTTTTACTTCCACTGTTTGAATGGTCT +
Preference number: 6 (lower is better)
Translates to: TAALSTCLLELE*DPLLLPLFEWS
Trigger: AGACCATTCAAACAGTGGAAGTAAAAGAGGATCCCATTCCAGCTCCAGAAGACATGTTGATAAGGCTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp CAGGGCATCCTTTGTCATAGCACTGTAGTTACAGCCTaGGTTTTGACACACAAAGGGCTTATTAACTCTGTC +
Preference number: 6 (lower is better)
Translates to: QGILCHSTVVTA*VLTHKGLINSV
Trigger: GACAGAGTTAATAAGCCCTTTGTGTGTCAAAACCAAGGCTGTAACTACAGTGCTATGACAAAGGATGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp CTGTTACATTCTTTGAGGGTTTTGGAATTTGGCGTTTaGTTCTGGTTTGATGGTGAGGTGTTTGGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: LLHSLRVLEFGV*FWFDGEVFGWQ
Trigger: TTGCCACCCAAACACCTCACCATCAAACCAGAATCAAACGCCAAATTCCAAAACCCTCAAAGAATGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp TGTACAAAGATTTCACTGTCTTTACAGGAACACACATaGCTGCTACCAGCCACAGCAGCCTTATCAACATGT +
Preference number: 6 (lower is better)
Translates to: CTKISLSLQEHT*LLPATAALSTC
Trigger: ACATGTTGATAAGGCTGCTGTGGCTGGTAGCAGTCATGTGTGTTCCTGTAAAGACAGTGAAATCTTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GCTTACAAAGTGCCTTCTACAGTACTGGCAAATGACTTTCTTGCTTaGCATTTCAAGAAAGCGTTTGGCATCTTCACTATCCTTATGGCC +
Preference number: 6 (lower is better)
Translates to: AYKVPSTVLANDFLA*HFKKAFGIFTILMA
Trigger: GGCCATAAGGATAGTGAAGATGCCAAACGCTTTCTTGAAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTAGAAGGCACTTTGTAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp CTCAGGTATGTTGTAAAAGACAACTTACACTCCAACTaGTCACATGGAAATTTGCCAACATCCACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LRYVVKDNLHSN*SHGNLPTSTAA
Trigger: TGCTGCTGTGGATGTTGGCAAATTTCCATGTGATCAGTTGGAGTGTAAGTTGTCTTTTACAACATACCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp TGTTGTAAAAGACAACTTACACTCCAACTGATCACATaGAAATTTGCCAACATCCACAGCAGCAGTCATGCT +
Preference number: 6 (lower is better)
Translates to: CCKRQLTLQLIT*KFANIHSSSHA
Trigger: AGCATGACTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATCAGTTGGAGTGTAAGTTGTCTTTTACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TTCTTTGTCACAGAGCAAACAATACTGCATGTAGGCTaGCCAATTCCTAAACCTAGCAGATATAAACCCCCT +
Preference number: 6 (lower is better)
Translates to: FFVTEQTILHVG*PIPKPSRYKPP
Trigger: AGGGGGTTTATATCTGCTAGGTTTAGGAATTGGCAAGCCTACATGCAGTATTGTTTGCTCTGTGACAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp GAAGTTGCATGCTGTAATTTATCTGAGCATTCTGTGTaGTCTCACCAGTACCCTGAGATCCACTTTTTACCT +
Preference number: 6 (lower is better)
Translates to: EVACCNLSEHSV*SHQYPEIHFLP
Trigger: AGGTAAAAAGTGGATCTCAGGGTACTGGTGAGACAACACAGAATGCTCAGATAAATTACAGCATGCAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TGGAGCTGGAATGGGATCCTCTTTTACTTCCACTGTTaGAATGGTCTCTGTCACTATTTTTCTTCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: WSWNGILFYFHC*NGLCHYFSSAS
Trigger: TGAAGCAGAAGAAAAATAGTGACAGAGACCATTCAAACAGTGGAAGTAAAAGAGGATCCCATTCCAGCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GTGACGCTTACAAAGTGCCTTCTACAGTACTGGCAAATGACTTTCTaGCTTTGCATTTCAAGAAAGCGTTTGGCATCTTCACTATCCTTA +
Preference number: 6 (lower is better)
Translates to: VTLTKCLLQYWQMTF*LCISRKRLASSLSL
Trigger: TAAGGATAGTGAAGATGCCAAACGCTTTCTTGAAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTAGAAGGCACTTTGTAAGCGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp AAATGTCCTGTATTTGATCCTCCTTATGTAATGCTTCAGACTTTGTaGGCATTACAGTTAGGAAAGAGGAGCACTGAGAAGCATCAGGCA +
Preference number: 6 (lower is better)
Translates to: KCPVFDPPYVMLQTL*ALQLGKRSTEKHQA
Trigger: TGCCTGATGCTTCTCAGTGCTCCTCTTTCCTAACTGTAATGCCAACAAAGTCTGAAGCATTACATAAGGAGGATCAAATACAGGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp GTGTTTAAACAGGGCATCCTTTGTCATAGCACTGTAGTTACAGCCTaGGTTTTGACACACAAAGGGCTTATTAACTCTGTCATTAAGCTG +
Preference number: 6 (lower is better)
Translates to: VFKQGILCHSTVVTA*VLTHKGLINSVIKL
Trigger: CAGCTTAATGACAGAGTTAATAAGCCCTTTGTGTGTCAAAACCAAGGCTGTAACTACAGTGCTATGACAAAGGATGCCCTGTTTAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TTACTGAGGGAAGTTGCATGCTGTAATTTATCTGAGCATTCTGTGTaGTCTCACCAGTACCCTGAGATCCACTTTTTACCTCAAGTATTT +
Preference number: 6 (lower is better)
Translates to: LLREVACCNLSEHSV*SHQYPEIHFLPQVF
Trigger: AAATACTTGAGGTAAAAAGTGGATCTCAGGGTACTGGTGAGACAACACAGAATGCTCAGATAAATTACAGCATGCAACTTCCCTCAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp CTAAAATGTCCTGTATTTGATCCTCCTTATGTAATGCTTCAGACTTaGTTGGCATTACAGTTAGGAAAGAGGAGCACTGAGAAGCATCAG +
Preference number: 6 (lower is better)
Translates to: LKCPVFDPPYVMLQT*LALQLGKRSTEKHQ
Trigger: CTGATGCTTCTCAGTGCTCCTCTTTCCTAACTGTAATGCCAACAAAGTCTGAAGCATTACATAAGGAGGATCAAATACAGGACATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TCCTGGCCAGTTAATTTTCTTGGCCGAATCAGATGGGCTTTATGCTaGTCATTATGTTTATTAAAGATGTGTCGGAGAAGATTAGACCGA +
Preference number: 6 (lower is better)
Translates to: SWPVNFLGRIRWALC*SLCLLKMCRRRLDR
Trigger: TCGGTCTAATCTTCTCCGACACATCTTTAATAAACATAATGACAAGCATAAAGCCCATCTGATTCGGCCAAGAAAATTAACTGGCCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GGCTTTTGTCTTTCTGATGTGCAGGAATCATGCTCCTaGAATTCGTTATTTCCCTTTAAAGTGGTATTGCCT +
Preference number: 6 (lower is better)
Translates to: GFCLSDVQESCS*NSLFPFKVVLP
Trigger: AGGCAATACCACTTTAAAGGGAAATAACGAATTTCAGGAGCATGATTCCTGCACATCAGAAAGACAAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp AAGACAACTTACACTCCAACTGATCACATGGAAATTTaGCAACATCCACAGCAGCAGTCATGCTTTCAATTT +
Preference number: 6 (lower is better)
Translates to: KTTYTPTDHMEI*QHPQQQSCFQF
Trigger: AAATTGAAAGCATGACTGCTGCTGTGGATGTTGGCAAATTTCCATGTGATCAGTTGGAGTGTAAGTTGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TATGGGACAGCTGTAAATCCCATCTTTGTAATGTTTTaGAGCATGCCGTACTATTCTGTGTCCAAGGAATTC +
Preference number: 6 (lower is better)
Translates to: YGTAVNPIFVMF*SMPYYSVSKEF
Trigger: GAATTCCTTGGACACAGAATAGTACGGCATGCTCAAAAACATTACAAAGATGGGATTTACAGCTGTCCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp ACAAAGTGCCTTCTACAGTACTGGCAAATGACTTTCTaGCTTTGCATTTCAAGAAAGCGTTTGGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: TKCLLQYWQMTF*LCISRKRLASS
Trigger: TGAAGATGCCAAACGCTTTCTTGAAATGCAAAGCAAGAAAGTCATTTGCCAGTACTGTAGAAGGCACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp CTGGATGAGGTTTTAACATCACCTCCACATTCAAACTaGCAAATTTGTGAATTGTCTTCAAGTCCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: LDEVLTSPPHSN*QICELSSSPAS
Trigger: TGAGGCAGGACTTGAAGACAATTCACAAATTTGCAAGTTTGAATGTGGAGGTGATGTTAAAACCTCATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp GTCTTTAAAGCATGTTTCTGGATTAAAGTTAGACTGTaGCGGCTGTTGCATATTTACTGCACTTGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: VFKACFWIKVRL*RLLHIYCTCGE
Trigger: CTCTCCACAAGTGCAGTAAATATGCAACAGCCGCAACAGTCTAACTTTAATCCAGAAACATGCTTTAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp GTCTTTGGCATTTTCATTCCGTCTTTCCCGGATCTGTaGGGTTTTGTTGTCCGATGTTTAGACTTTGATTTT +
Preference number: 6 (lower is better)
Translates to: VFGIFIPSFPDL*GFVVRCLDFDF
Trigger: AAAATCAAAGTCTAAACATCGGACAACAAAACCCAACAGATCCGGGAAAGACGGAATGAAAATGCCAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GTTTCTAAAGCCTGCTTAATAATTTCACTGCCTTCCTaGCTAACACTGGCATTAAAGTTACTCACGTCACAT +
Preference number: 6 (lower is better)
Translates to: VSKACLIISLPS*LTLALKLLTSH
Trigger: ATGTGACGTGAGTAACTTTAATGCCAGTGTTAGTCAGGAAGGCAGTGAAATTATTAAGCAGGCTTTAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp TCTTTAAAGCATGTTTCTGGATTAAAGTTAGACTGTTaGGGCTGTTGCATATTTACTGCACTTGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SLKHVSGLKLDC*GCCIFTALVER
Trigger: TCTCTCCACAAGTGCAGTAAATATGCAACAGCCGCAACAGTCTAACTTTAATCCAGAAACATGCTTTAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS GCA 72 bp GGTAAAAAGGTTGGACGATTTTCCACATTAAGAAGTTaGAGGAATGATGGGTCTTTAAAGCATGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GKKVGRFSTLRS*RNDGSLKHVSG
Trigger: TCCAGAAACATGCTTTAAAGACCCATCATTCCTGCAACTTCTTAATGTGGAAAATCGTCCAACCTTTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CCA 72 bp CTCTTTCCGTGTATTATTTACCACCAAGGATACTTCTaGCTCAGTTTTATCAATCTTCCGTTTCTTACTCTG +
Preference number: 6 (lower is better)
Translates to: LFPCIIYHQGYF*LSFINLPFLTL
Trigger: CAGAGTAAGAAACGGAAGATTGATAAAACTGAGCCAGAAGTATCCTTGGTGGTAAATAATACACGGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TCATCACCCTCTGACTCTAAGTTACAGATCATTTCTAACGCATCTTaGCAATCCACTTCTGAAATCTCTTCAATTAGCTTTTCACTTGGA +
Preference number: 6 (lower is better)
Translates to: SSPSDSKLQIISNAS*QSTSEISSISFSLG
Trigger: TCCAAGTGAAAAGCTAATTGAAGAGATTTCAGAAGTGGATTGCAAAGATGCGTTAGAAATGATCTGTAACTTAGAGTCAGAGGGTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 90 bp TTTCTTATCATTCTTTTCATCTTCTTGCTCAGAGATTTCCTTTCCTaGTGGGTTGCCATATCGCTTAAAGACAATAAGAATGTTGCGGTG +
Preference number: 6 (lower is better)
Translates to: FLIILFIFLLRDFLS*WVAISLKDNKNVAV
Trigger: CACCGCAACATTCTTATTGTCTTTAAGCGATATGGCAACCCACAAGGAAAGGAAATCTCTGAGCAAGAAGATGAAAAGAATGATAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp TGTGAACATAATATGCCATCTTGTCCATGTTTATCCTaGGAAGGTATATTTGGACTTAGGACACTTTCCACT +
Preference number: 6 (lower is better)
Translates to: CEHNMPSCPCLS*EGIFGLRTLST
Trigger: AGTGGAAAGTGTCCTAAGTCCAAATATACCTTCTCAGGATAAACATGGACAAGATGGCATATTATGTTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp GGTTGGACGATTTTCCACATTAAGAAGTTGCAGGAATaGTGGGTCTTTAAAGCATGTTTCTGGATTAAAGTT +
Preference number: 6 (lower is better)
Translates to: GWTIFHIKKLQE*WVFKACFWIKV
Trigger: AACTTTAATCCAGAAACATGCTTTAAAGACCCATCATTCCTGCAACTTCTTAATGTGGAAAATCGTCCAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp CCTTACTTGATATATTTTCCTGGCCAGTTAATTTTCTaGGCCGAATCAGATGGGCTTTATGCTTGTCATTAT +
Preference number: 6 (lower is better)
Translates to: PYLIYFPGQLIF*AESDGLYACHY
Trigger: ATAATGACAAGCATAAAGCCCATCTGATTCGGCCAAGAAAATTAACTGGCCAGGAAAATATATCAAGTAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS TCA 72 bp CTCATAAGACTTGTCCTTGTCGTCATTTTCATCATCTaGACCATCGTTGTCATTAAACACTATGAAATCTGT +
Preference number: 6 (lower is better)
Translates to: LIRLVLVVIFII*TIVVIKHYEIC
Trigger: ACAGATTTCATAGTGTTTAATGACAACGATGGTTCAGATGATGAAAATGACGACAAGGACAAGTCTTATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp AAATTTTGTGGTGGTTCAGTAGAACTACTGAATGAATaGGAGCACAAGCCATTTTCAATAGTCTTTAGCAGT +
Preference number: 6 (lower is better)
Translates to: KFCGGSVELLNE*EHKPFSIVFSS
Trigger: ACTGCTAAAGACTATTGAAAATGGCTTGTGCTCCAATTCATTCAGTAGTTCTACTGAACCACCACAAAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9
CDS CAA 72 bp TCTGACTCTAAGTTACAGATCATTTCTAACGCATCTTaGCAATCCACTTCTGAAATCTCTTCAATTAGCTTT +
Preference number: 6 (lower is better)
Translates to: SDSKLQIISNAS*QSTSEISSISF
Trigger: AAAGCTAATTGAAGAGATTTCAGAAGTGGATTGCAAAGATGCGTTAGAAATGATCTGTAACTTAGAGTCAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047950.6
ENSMUST00000098163.9