Pregenerated sensors for ZFP286 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047342Ensembl transcript IDs: ENSMUST00000054654.13, ENSMUST00000108705.8, ENSMUST00000207597.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGAGATTCCCTCATGTGTTCGGCGTTGTTGGCCAGGTCCTTCTGTaGCAATTCCTGGTTCTGGGAAAAGAGAAGCTTCAAGTCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: WRFPHVFGVVGQVLL*QFLVLGKEKLQVWS Trigger: GCTCCAGACTTGAAGCTTCTCTTTTCCCAGAACCAGGAATTGTCACAGAAGGACCTGGCCAACAACGCCGAACACATGAGGGAATCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR CCA 90 bp | CGAGAGCATGCCAGGCTGCCACAGAGTTGCTTCAGCGTTCTTGACTaGGACCCAAAATCAAATAATACATTCACCCTTATCAACCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: REHARLPQSCFSVLD*DPKSNNTFTLINLS Trigger: TGAAAGGTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAAGCAACTCTGTGGCAGCCTGGCATGCTCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR TCA 90 bp | AGAAGGGATCTCCTTTCTGCTGTTCAGAGTTATACACAGGGCAAGTaGAATCATACACACACAGACACACCCCAGGGTCATATTATGGTC | + |
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Preference number: 1 (lower is better) Translates to: RRDLLSAVQSYTQGK*NHTHTDTPQGHIMV Trigger: GACCATAATATGACCCTGGGGTGTGTCTGTGTGTGTATGATTTCACTTGCCCTGTGTATAACTCTGAACAGCAGAAAGGAGATCCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR GCA 90 bp | GTGAGCTTTTTACATACTCGAGAGCATGCCAGGCTGCCACAGAGTTaGTTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTC | + |
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Preference number: 1 (lower is better) Translates to: VSFLHTREHARLPQS*FSVLDWDPKSNNTF Trigger: GAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAAGCAACTCTGTGGCAGCCTGGCATGCTCTCGAGTATGTAAAAAGCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR GCA 90 bp | AAAAGAGGACCTTGGCACAGAAAGACAAGACTCCCATCTGTTAGGTaGCGTAGGGTAGATCCAAGGGAACTAGAGAATCTTCAAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: KRGPWHRKTRLPSVR*RRVDPRELENLQNK Trigger: TTTGTTTTGAAGATTCTCTAGTTCCCTTGGATCTACCCTACGGCACCTAACAGATGGGAGTCTTGTCTTTCTGTGCCAAGGTCCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CCA 90 bp | AATTTTGAGAACTCTAGCCAGAGGGCTTCACTATTATCAAGCCAATaGGTAGAAGGGATCTCCTTTCTGCTGTTCAGAGTTATACACAGG | + |
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Preference number: 1 (lower is better) Translates to: NFENSSQRASLLSSQ*VEGISFLLFRVIHR Trigger: CCTGTGTATAACTCTGAACAGCAGAAAGGAGATCCCTTCTACCCATTGGCTTGATAATAGTGAAGCCCTCTGGCTAGAGTTCTCAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR GCA 90 bp | CATAAAGTTTCTCTTTATTGTGACCTCTTCATGTTGAATGAGCAGTaGCTTCAAACAAAAGGCCCTTTCACATGTGCCTACATCTATAGG | + |
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Preference number: 1 (lower is better) Translates to: HKVSLYCDLFMLNEQ*LQTKGPFTCAYIYR Trigger: CCTATAGATGTAGGCACATGTGAAAGGGCCTTTTGTTTGAAGGCACTGCTCATTCAACATGAAGAGGTCACAATAAAGAGAAACTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR CCA 90 bp | ATAATTTTTCTGTCTTCTGTATCCTTGACGATTACCTCCCCCAAATaGGTATCTGCAATCAAATGTAAATTCTTCGTGGAGATTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: IIFLSSVSLTITSPK*VSAIKCKFFVEIPS Trigger: TGAGGGAATCTCCACGAAGAATTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGAAGACAGAAAAATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR TCA 90 bp | CAATGGCTTTTGTTCACATCCATTACTACTAATAATAGATCACTATaGTTTCATGGTGTGTTTACATTAGAGGTCAGGGATAAAGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: QWLLFTSITTNNRSL*FHGVFTLEVRDKGQ Trigger: TTGGCCTTTATCCCTGACCTCTAATGTAAACACACCATGAAATCATAGTGATCTATTATTAGTAGTAATGGATGTGAACAAAAGCCATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR TCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCGGGAGGGGCTGCTCTTaGAGCTTTTCCCACACTCGG | + |
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Preference number: 2 (lower is better) Translates to: MKRSNKANLHLTLSTSQGGRGCS*SFSHTR Trigger: CCGAGTGTGGGAAAAGCTTCAAGAGCAGCCCCTCCC...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCGTCAGATTGGCTCTGTaGCTGAAGGACTTCCCGCAC | + |
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Preference number: 2 (lower is better) Translates to: MKRSNKANLHLTLSTSQGVRLAL*LKDFPH Trigger: GTGCGGGAAGTCCTTCAGCCACAGAGCCAATCTGAC...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCGGCCAGGTCCTTCTGTaGCAATTCCTGGTTCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: WFITKFWFPTLHACVGSLGQVLL*QFLVLG Trigger: TCCCAGAACCAGGAATTGTCACAGAAGGACCTGGCC...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAGTCTTTTCCCAAGCGTGTGAACGTCCCAGGATCCTTTGGGGTCTCTGTCCTTGCTCTCAGGTCTaGTTTCCATGTCTGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ASVFSQACERPRILWGLCPCSQV*FPCLKR Trigger: TCTTTTCAGACATGGAAACCAGACCTGAGAGCAAGG...ACAGAGACCCCAAAGGATCCTGGGACGTTCACACGCTTGGGAAAAGACTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATGAGGGATGAGAACACACGAACAGCCTCTCCACAGTCACAGCATTCACAGTGTGTTCGGCGTTGTTaGCCAGGTCCTTCTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: LMRDENTRTASPQSQHSQCVRRC*PGPSVT Trigger: TGTCACAGAAGGACCTGGCCAACAACGCCGAACACA...CTGTGAATGCTGTGACTGTGGAGAGGCTGTTCGTGTGTTCTCATCCCTCATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCGAGAAGCTTCAAGTCTaGAGCCCCTTAGAGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: WFITKFWFPTLHACVGSLEKLQV*SPLEQL Trigger: AAGCTGCTCTAAGGGGCTCCAGACTTGAAGCTTCTC...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR CAA 90 bp | ATACTCGAGAGCATGCCAGGCTGCCACAGAGTTGCTTCAGCGTTCTaGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACC | + |
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Preference number: 2 (lower is better) Translates to: ILESMPGCHRVASAF*TGTQNQIIHSPLST Trigger: GGTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAAGCAACTCTGTGGCAGCCTGGCATGCTCTCGAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR TCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCGGAGAGGTTTCTGACTaGAGCTTTTCCAATATACAT | + |
|
Preference number: 2 (lower is better) Translates to: MKRSNKANLHLTLSTSQGGEVSD*SFSNIH Trigger: ATGTATATTGGAAAAGCTTCAGTCAGAAACCTCTCC...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCATGCTTTGCAAAATTTaGGCTCCGGCTGAATGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: MKRSNKANLHLTLSTSQGMLCKI*APAECF Trigger: AAAACATTCAGCCGGAGCTCAAATTTTGCAAAGCAT...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCATGTTGAATGAGCAGTaGCTTCAAACAAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: WFITKFWFPTLHACVGSLMLNEQ*LQTKGP Trigger: AGGGCCTTTTGTTTGAAGGCACTGCTCATTCAACAT...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCTGTTTGACTCTTCTTTaGAAAAGTCTAGCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: MKRSNKANLHLTLSTSQGCLTLL*KSLALK Trigger: CTTCAGTGCTAGACTTTTCCAAAGAAGAGTCAAACA...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCACCCTTATCAACCTTTCAGATATGTTCAAACTGCAACACACCCAGAGGGCAAGCCAAGGGCTCTATaGATGGCAAAGATGAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IHPYQPFRYVQTATHPEGKPRAL*MAKMRK Trigger: TTTTCTCATCTTTGCCATCCATAGAGCCCTTGGCTT...GCCCTCTGGGTGTGTTGCAGTTTGAACATATCTGAAAGGTTGATAAGGGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR CCA 90 bp | TTAATGAGGGATGAGAACACACGAACAGCCTCTCCACAGTCACAGCATTCACAGTTTATCACTAAGTTTTaGTTTCCCACATTGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LMRDENTRTASPQSQHSQFITKF*FPTLHA Trigger: TGCATGCAATGTGGGAAACCAAAACTTAGTGATAAA...CTGTGAATGCTGTGACTGTGGAGAGGCTGTTCGTGTGTTCTCATCCCTCATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTTGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCCCTCTTCATGTTGAATaGGCAGTGCCTTCAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: KFWFITKFWFPTLHACVGPLHVE*AVPSNK Trigger: TTTGTTTGAAGGCACTGCTCATTCAACATGAAGAGG...GCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCAAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTTGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTTCTGTGACAATTCCTaGTTCTGGGAAAAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: KFWFITKFWFPTLHACVGFCDNS*FWEKRS Trigger: GCTTCTCTTTTCCCAGAACCAGGAATTGTCACAGAA...GCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCAAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATTTAGTTAAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATAAACAATACACATGGTaGGTGTCTGTCTCTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: VHLVKFIKLDSTLCGGWNKQYTW*VSVSEF Trigger: AAACTCAGAGACAGACACCCACCATGTGTATTGTTT...ATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTTAACTAAATGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR CCA 90 bp | GTGCATTTAGTTAAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATCCCAGGGTCATATTATaGTCTCTCTATTTCAACAAT | + |
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Preference number: 2 (lower is better) Translates to: VHLVKFIKLDSTLCGGWNPRVIL*SLYFNN Trigger: ATTGTTGAAATAGAGAGACCATAATATGACCCTGGG...ATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTTAACTAAATGCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR CCA 90 bp | ATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATTCTAAGCAGTTTTCATCTAACCAGATTTCACAATaGTCACAGTTTTACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: IKLDSTLCGGWNSKQFSSNQISQ*SQFYCL Trigger: GAGACAGTAAAACTGTGACCATTGTGAAATCTGGTT...AGATGAAAACTGCTTAGAATTCCATCCCCCACAAAGAGTGCTATCTAACTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CAA 90 bp | ATAAATGATGAAGTCTGCCTTATAATTTTTCTGTCTTCTGTATCCTaGACGATTACCTCCCCCAAATGGGTATCTGCAATCAAATGTAAA | + |
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Preference number: 2 (lower is better) Translates to: INDEVCLIIFLSSVS*TITSPKWVSAIKCK Trigger: TTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGAAGACAGAAAAATTATAAGGCAGACTTCATCATTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CCA 90 bp | AACATTAAAAATTGTGGTATCCTTGGAAGATTTTCCACACTCATTGCGTCTGTAATACGGCACAAGTTTTaGTTTATCACTAAGTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: NIKNCGILGRFSTLIASVIRHKF*FITKFW Trigger: CCAAAACTTAGTGATAAACCAAAACTTGTGCCGTAT...TACAGACGCAATGAGTGTGGAAAATCTTCCAAGGATACCACAATTTTTAATGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR TCA 72 bp | CGTTCACCATCTTCTTGCGCAGGGAGGGAGTTCCTGTaGGCAGACATTTGTCTTGGGTACCTCTCCCGATTT | + |
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Preference number: 3 (lower is better) Translates to: RSPSSCAGREFL*ADICLGYLSRF Trigger: AAATCGGGAGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCCTGCGCAAGAAGATGGTGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR CCA 72 bp | CAATTCCTGGTTCTGGGAAAAGAGAAGCTTCAAGTCTaGAGCCCCTTAGAGCAGCTTGCTTCTTCTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: QFLVLGKEKLQV*SPLEQLASSPS Trigger: GGAGGGAGAAGAAGCAAGCTGCTCTAAGGGGCTCCAGACTTGAAGCTTCTCTTTTCCCAGAACCAGGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR TCA 72 bp | CCTCATGTGTTCGGCGTTGTTGGCCAGGTCCTTCTGTaGCAATTCCTGGTTCTGGGAAAAGAGAAGCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: PHVFGVVGQVLL*QFLVLGKEKLQ Trigger: TTGAAGCTTCTCTTTTCCCAGAACCAGGAATTGTCACAGAAGGACCTGGCCAACAACGCCGAACACATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR GCA 72 bp | CCTTGGCACAGAAAGACAAGACTCCCATCTGTTAGGTaGCGTAGGGTAGATCCAAGGGAACTAGAGAATCTT | + |
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Preference number: 3 (lower is better) Translates to: PWHRKTRLPSVR*RRVDPRELENL Trigger: AAGATTCTCTAGTTCCCTTGGATCTACCCTACGGCACCTAACAGATGGGAGTCTTGTCTTTCTGTGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR-3UTR CAA 90 bp | GCTTCAGTCTTTTCCCAAGCGTGTGAACGTCCCAGGATCCTTTGGGGTCTCTGTCTGTTTGACTCTTCTTaGGAAAAGTCTAGCACTGAA | + |
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Preference number: 3 (lower is better) Translates to: ASVFSQACERPRILWGLCLFDSS*EKSSTE Trigger: TTCAGTGCTAGACTTTTCCAAAGAAGAGTCAAACAG...ACAGAGACCCCAAAGGATCCTGGGACGTTCACACGCTTGGGAAAAGACTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR TCA 72 bp | GCAGACATTTGTCTTGGGTACCTCTCCCGATTTCTTTaGCGATGTTCTAGCCAACGCTCACATTCAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: ADICLGYLSRFL*RCSSQRSHSRA Trigger: TGCTCTTGAATGTGAGCGTTGGCTAGAACATCGTCAAAGAAATCGGGAGAGGTACCCAAGACAAATGTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| 3UTR CCA 72 bp | GCCAGGCTGCCACAGAGTTGCTTCAGCGTTCTTGACTaGGACCCAAAATCAAATAATACATTCACCCTTATC | + |
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Preference number: 3 (lower is better) Translates to: ARLPQSCFSVLD*DPKSNNTFTLI Trigger: GATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAAGCAACTCTGTGGCAGCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CCA 72 bp | AACTCTAGCCAGAGGGCTTCACTATTATCAAGCCAATaGGTAGAAGGGATCTCCTTTCTGCTGTTCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: NSSQRASLLSSQ*VEGISFLLFRV Trigger: AACTCTGAACAGCAGAAAGGAGATCCCTTCTACCCATTGGCTTGATAATAGTGAAGCCCTCTGGCTAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CCA 72 bp | CTGATACGGCACAAGTTTTGGTTTATCACTAAGTTTTaGTTTCCCACATTGCATGCATGCGTAGGCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LIRHKFWFITKF*FPTLHACVGSL Trigger: GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCAAAACTTGTGCCGTATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCACCCTTATCAACCTTTCAGATATGTTCAAACTGCAACACACCCAGAGGGCCTGGGAACAAAAATTTaGAGAACTCTAGCCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: IHPYQPFRYVQTATHPEGLGTKI*RTLARG Trigger: CCCTCTGGCTAGAGTTCTCAAAATTTTTGTTCCCAG...GCCCTCTGGGTGTGTTGCAGTTTGAACATATCTGAAAGGTTGATAAGGGTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR TCA 72 bp | ATTATAGAAAGCCAAGGGCTCTATGGATGGCAAAGATaGGAAAAGAGGACCTTGGCACAGAAAGACAAGACT | + |
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Preference number: 3 (lower is better) Translates to: IIESQGLYGWQR*EKRTLAQKDKT Trigger: AGTCTTGTCTTTCTGTGCCAAGGTCCTCTTTTCTCATCTTTGCCATCCATAGAGCCCTTGGCTTTCTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CCA 72 bp | CTGTCTTCTGTATCCTTGACGATTACCTCCCCCAAATaGGTATCTGCAATCAAATGTAAATTCTTCGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: LSSVSLTITSPK*VSAIKCKFFVE Trigger: CTCCACGAAGAATTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGAAGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR CCA 72 bp | TACAGAAATTACTCTCGAAGGAAACAATACACATGGTaGGTGTCTGTCTCTGAGTTTAGAGTAACTCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: YRNYSRRKQYTW*VSVSEFRVTQL Trigger: CAGCTGAGTTACTCTAAACTCAGAGACAGACACCCACCATGTGTATTGTTTCCTTCGAGAGTAATTTCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR CCA 72 bp | AAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATaGAATTCTAAGCAGTTTTCATCTATCAACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KFIKLDSTLCGG*NSKQFSSINLP Trigger: AGGAAGGTTGATAGATGAAAACTGCTTAGAATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| 3UTR TCA 72 bp | TTCATAAAGTTTCTCTTTATTGTGACCTCTTCATGTTaGATGAGCAGTGCCTTCAAACAAAAGGCCCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: FIKFLFIVTSSC*MSSAFKQKALS Trigger: TGAAAGGGCCTTTTGTTTGAAGGCACTGCTCATTCAACATGAAGAGGTCACAATAAAGAGAAACTTTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| 3UTR TCA 72 bp | CTTTCTAAAATTCACAGGGCACACTTCACCAAACACTaGATAATCTATCGAAATAAACTCTCCTTGATGATC | + |
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Preference number: 3 (lower is better) Translates to: LSKIHRAHFTKH*IIYRNKLSLMI Trigger: GATCATCAAGGAGAGTTTATTTCGATAGATTATTCAGTGTTTGGTGAAGTGTGCCCTGTGAATTTTAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| CDS-3UTR GCA 90 bp | GGTTCTGGGAAAAGAGAAGCTTCAAGTCTGGAGCCCCTTAGAGCAGCTTGCTTCCATCACGGCCCTGTGTaGAGGATCCAGCTTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSGKREASSLEPLRAACFHHGPV*RIQLPP Trigger: TGGGGGAAGCTGGATCCTGCACACAGGGCCGTGATG...GAAGCAAGCTGCTCTAAGGGGCTCCAGACTTGAAGCTTCTCTTTTCCCAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS-3UTR TCA 90 bp | CTTCTTGCGCAGGGAGGGAGTTCCTGTGAGCAGACATTTGTCTTGGGTACCTCTGACAGAGCTCTTTTCTaGGGCACTTCGGCCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: LLAQGGSSCEQTFVLGTSDRALF*GTSAKP Trigger: GGGTTTGGCCGAAGTGCCTCAGAAAAGAGCTCTGTC...AGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCCTGCGCAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| CDS-3UTR CCA 90 bp | GGTTCTGGGAAAAGAGAAGCTTCAAGTCTGGAGCCCCTTAGAGCAGCTTGCTTCTCAGGCCTTCCATTCTaGAGCCCCATAGGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGKREASSLEPLRAACFSGLPF*SPIGLS Trigger: AGAAAGGCCTATGGGGCTCCAGAATGGAAGGCCTGA...GAAGCAAGCTGCTCTAAGGGGCTCCAGACTTGAAGCTTCTCTTTTCCCAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGCGCAGGGAGGGAGTTCCTGTGAGCAGACATTTGTCTTGGGTACCTCTAATGTCATGGCTTCCTaGGATCTGACAGTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLAQGGSSCEQTFVLGTSNVMAS*DLTVSL Trigger: GAGACTCACTGTCAGATCCCAGGAAGCCATGACATT...AGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCCTGCGCAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| 3UTR CAA 72 bp | GCGCAGGGAGGGAGTTCCTGTGAGCAGACATTTGTCTaGGGTACCTCTCCCGATTTCTTTGACGATGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AQGGSSCEQTFV*GTSPDFFDDVL Trigger: TAGAACATCGTCAAAGAAATCGGGAGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCCTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| 3UTR CAA 72 bp | TTCTTGCGCAGGGAGGGAGTTCCTGTGAGCAGACATTaGTCTTGGGTACCTCTCCCGATTTCTTTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLRREGVPVSRH*SWVPLPISLTM Trigger: CATCGTCAAAGAAATCGGGAGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCCTGCGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTCCCTGCTGGGACTAAGCACAGCGAAACCAGATTTCACAATGGTCACAGTAATGTCATGGCTTCCTaGGATCTGACAGTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVPAGTKHSETRFHNGHSNVMAS*DLTVSL Trigger: GAGACTCACTGTCAGATCCCAGGAAGCCATGACATT...ACTGTGACCATTGTGAAATCTGGTTTCGCTGTGCTTAGTCCCAGCAGGGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CCA 90 bp | ATGAAACGCAGCAATAAAGCCAACCTTCACCTAACACTCAGCACCTCTCAGGGCCTGAGTCACTGCACTTaGGAGACTTCTCAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: MKRSNKANLHLTLSTSQGLSHCT*ETSQAS Trigger: CGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAG...GCCCTGAGAGGTGCTGAGTGTTAGGTGAAGGTTGGCTTTATTGCTGCGTTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| CDS-3UTR TCA 90 bp | GGGTATCTGCAATCAAATGTAAATTCTTCGTGGAGATTCCCTCATGTGTTCGGCGACAGAGCTCTTTTCTaGGGCACTTCGGCCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GYLQSNVNSSWRFPHVFGDRALF*GTSAKP Trigger: GGGTTTGGCCGAAGTGCCTCAGAAAAGAGCTCTGTC...GCCGAACACATGAGGGAATCTCCACGAAGAATTTACATTTGATTGCAGATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| 3UTR CAA 72 bp | AGCATGCCAGGCTGCCACAGAGTTGCTTCAGCGTTCTaGACTGGGACCCAAAATCAAATAATACATTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SMPGCHRVASAF*TGTQNQIIHSP Trigger: GGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAAGCAACTCTGTGGCAGCCTGGCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCCTGCTGGGACTAAGCACAGCGAAACCAGATTTCACAATGGTCACAGTGTGTTGAATAAGAGCTaGCGAATGAACGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVPAGTKHSETRFHNGHSVLNKS*RMNEGF Trigger: AAAGCCTTCGTTCATTCGTCAGCTCTTATTCAACAC...ACTGTGACCATTGTGAAATCTGGTTTCGCTGTGCTTAGTCCCAGCAGGGACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | GTGCATTTAGTTAAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATGGGAGGGGCTGCTCTTaGAGCTTTTCCCACACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLVKFIKLDSTLCGGWNGRGCS*SFSHTR Trigger: CCGAGTGTGGGAAAAGCTTCAAGAGCAGCCCCTCCC...ATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTTAACTAAATGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR GCA 90 bp | TATCAACCTTTCAGATATGTTCAAACTGCAACACACCCAGAGGGCTTTCTAAAACATCACGGCCCTGTGTaGAGGATCCAGCTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQPFRYVQTATHPEGFLKHHGPV*RIQLPP Trigger: TGGGGGAAGCTGGATCCTGCACACAGGGCCGTGATG...TTTTAGAAAGCCCTCTGGGTGTGTTGCAGTTTGAACATATCTGAAAGGTTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR GCA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCAGCCATCTCTGCTTCTaGTTTCTGAAAGGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WFITKFWFPTLHACVGSLSHLCF*FLKGWL Trigger: CAGCCACCCTTTCAGAAAGCAGAAGCAGAGATGGCT...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGAACAAAAATTTTGAGAACTCTAGCCAGAGGGCTTCACTATTATCAAGCGGGAGGGAGTTCCTGTaGGCAGACATTTGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGNKNFENSSQRASLLSSGREFL*ADICLG Trigger: CCCAAGACAAATGTCTGCTCACAGGAACTCCCTCCC...GCTTGATAATAGTGAAGCCCTCTGGCTAGAGTTCTCAAAATTTTTGTTCCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTTTCCATGTCTGAAAAGACATTGCAAATGCACATGTTCTTTGTTTTCTCATCACGGCCCTGTGTaGAGGATCCAGCTTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWFPCLKRHCKCTCSLFSHHGPV*RIQLPP Trigger: TGGGGGAAGCTGGATCCTGCACACAGGGCCGTGATG...AGAAAACAAAGAACATGTGCATTTGCAATGTCTTTTCAGACATGGAAACCAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGTTCCTGTGAGCAGACATTTGTCTTGGGTACCTCTCCCGATTTCTTTGACGAAGATGAATCAAGATaGAAGCATGCCTTTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSCEQTFVLGTSPDFFDEDESR*KHAFVE Trigger: CTCCACAAAGGCATGCTTCCATCTTGATTCATCTTC...GTCAAAGAAATCGGGAGAGGTACCCAAGACAAATGTCTGCTCACAGGAACTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGTGGGGGATGGAATTCTAAGCAGTTTTCATCTATCAACCTTCCTTTACTTGACAGAGCTCTTTTCTaGGGCACTTCGGCCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LCGGWNSKQFSSINLPLLDRALF*GTSAKP Trigger: GGGTTTGGCCGAAGTGCCTCAGAAAAGAGCTCTGTC...AAGTAAAGGAAGGTTGATAGATGAAAACTGCTTAGAATTCCATCCCCCACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCCTGCTGGGACTAAGCACAGCGAAACCAGATTTCACAATGGTCACAGTATGTACCTCAAGGGATaGACTTTCTATGAAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVPAGTKHSETRFHNGHSMYLKG*TFYEGF Trigger: AAAACCTTCATAGAAAGTTCATCCCTTGAGGTACAT...ACTGTGACCATTGTGAAATCTGGTTTCGCTGTGCTTAGTCCCAGCAGGGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR GCA 90 bp | TCTGTATCCTTGACGATTACCTCCCCCAAATGGGTATCTGCAATCAAATGTAAACCCAGCAGCCATCTCTaGTTCTGCTTTCTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSLTITSPKWVSAIKCKPSSHL*FCFLKG Trigger: CCCTTTCAGAAAGCAGAAGCAGAGATGGCTGCTGGG...TTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAACAAAAATTTTGAGAACTCTAGCCAGAGGGCTTCACTATTATCAAGCTCTGCACTCTTCTCGTaGGAAAGGAGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGNKNFENSSQRASLLSSSALFS*ERRESG Trigger: CCCGGATTCTCTCCTTTCCCACGAGAAGAGTGCAGA...GCTTGATAATAGTGAAGCCCTCTGGCTAGAGTTCTCAAAATTTTTGTTCCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CCA 90 bp | TCTGTATCCTTGACGATTACCTCCCCCAAATGGGTATCTGCAATCAAATGTAAATCTGCACTCTTCTCGTaGGAAAGGAGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSLTITSPKWVSAIKCKSALFS*ERRESG Trigger: CCCGGATTCTCTCCTTTCCCACGAGAAGAGTGCAGA...TTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACGTCAGATTGGCTCTGTaGCTGAAGGACTTCCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVLDWDPKSNNTFTLINVRLAL*LKDFPH Trigger: GTGCGGGAAGTCCTTCAGCCACAGAGCCAATCTGAC...GTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | ATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATTCTAAGCAGTTTTCATCTCTTTTCCCAAGCGTGTaGACGTCCCAGGATCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKLDSTLCGGWNSKQFSSLFPSV*TSQDPL Trigger: CAAAGGATCCTGGGACGTTCACACGCTTGGGAAAAG...AGATGAAAACTGCTTAGAATTCCATCCCCCACAAAGAGTGCTATCTAACTTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR GCA 90 bp | TCTGTATCCTTGACGATTACCTCCCCCAAATGGGTATCTGCAATCAAATGTAAAAGTCAGGGGTCCAATTaGAAACATCCCAGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVSLTITSPKWVSAIKCKSQGSN*KHPSSH Trigger: ATGGCTGCTGGGATGTTTGCAATTGGACCCCTGACT...TTTACATTTGATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR TCA 90 bp | TATCAACCTTTCAGATATGTTCAAACTGCAACACACCCAGAGGGCTTTCTAAAATCTGGTTTCCATGTCTaGGTCACTGCACTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQPFRYVQTATHPEGFLKSGFHV*VTALGR Trigger: TCTCCCAAGTGCAGTGACTCAGACATGGAAACCAGA...TTTTAGAAAGCCCTCTGGGTGTGTTGCAGTTTGAACATATCTGAAAGGTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTTTCCATGTCTGAAAAGACATTGCAAATGCACATGTTCTTTGTTTTCTTCTGCACTCTTCTCGTaGGAAAGGAGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWFPCLKRHCKCTCSLFSSALFS*ERRESG Trigger: CCCGGATTCTCTCCTTTCCCACGAGAAGAGTGCAGA...AGAAAACAAAGAACATGTGCATTTGCAATGTCTTTTCAGACATGGAAACCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACCTGAGTCACTGCACTTaGGAGACTTCTCAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSVLDWDPKSNNTFTLINLSHCT*ETSQAS Trigger: CGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAG...GTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CCA 90 bp | TTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACCCTTGCTCTCAGGTCTaGTTTCCATGTCTGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVLDWDPKSNNTFTLINPCSQV*FPCLSH Trigger: GTGACTCAGACATGGAAACCAGACCTGAGAGCAAGG...GTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| 3UTR CAA 72 bp | GAAGTCTGCCTTATAATTTTTCTGTCTTCTGTATCCTaGACGATTACCTCCCCCAAATGGGTATCTGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: EVCLIIFLSSVS*TITSPKWVSAI Trigger: GATTGCAGATACCCATTTGGGGGAGGTAATCGTCAAGGATACAGAAGACAGAAAAATTATAAGGCAGACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CCA 90 bp | AACATTAAAAATTGTGGTATCCTTGGAAGATTTTCCACACTCATTGCGTCTGTACTGAGTCACTGCACTTaGGAGACTTCTCAAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NIKNCGILGRFSTLIASVLSHCT*ETSQAS Trigger: CGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAG...TACAGACGCAATGAGTGTGGAAAATCTTCCAAGGATACCACAATTTTTAATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR TCA 90 bp | GTGCATTTAGTTAAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATGAGCTGATGAGTGAATaGAAGCTTTGTCACATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VHLVKFIKLDSTLCGGWNELMSE*KLCHIR Trigger: ACGAATGTGACAAAGCTTTCATTCACTCATCAGCTC...ATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTTAACTAAATGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACGGAGAGGTTTCTGACTaGAGCTTTTCCAATATACAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVLDWDPKSNNTFTLINGEVSD*SFSNIH Trigger: ATGTATATTGGAAAAGCTTCAGTCAGAAACCTCTCC...GTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGCGTTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACATGCTTTGCAAAATTTaGGCTCCGGCTGAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVLDWDPKSNNTFTLINMLCKI*APAECF Trigger: AAAACATTCAGCCGGAGCTCAAATTTTGCAAAGCAT...GTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAACGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CCA 90 bp | TTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACCTTTCAGTGTTTGACTCTTCTTTaGAAAAGTCTAGCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTGTQNQIIHSPLSTFQCLTLL*KSLALK Trigger: CTTCAGTGCTAGACTTTTCCAAAGAAGAGTCAAACA...CTGAAAGGTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS TCA 90 bp | CCCAGCAGCCATCTCTGCTTCTGCTTTCTGAAAGGGTGGCTGTCCTaGGTCACTGCACTTGGGAGACTTCTCAAGCTTCGACAGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSHLCFCFLKGWLS*VTALGRLLKLRQFF Trigger: AAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGGACAGCCACCCTTTCAGAAAGCAGAAGCAGAGATGGCTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS GCA 90 bp | CCATCTCTGCTTCTGCTTTCTGAAAGGGTGGCTGTCCTGAGTCACTaGACTTGGGAGACTTCTCAAGCTTCGACAGTTCTTTTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLLLLSERVAVLSH*TWETSQASTVLFHL Trigger: AAGATGGAAAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGGACAGCCACCCTTTCAGAAAGCAGAAGCAGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS GCA 90 bp | ATCCTTAGTTGCAGATTTGGTCTCTCTCCAAGTCAGGGGTCCAATTaGAAACATCCCAGCAGCCATCTCTGCTTCTGCTTTCTGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILSCRFGLSPSQGSN*KHPSSHLCFCFLKG Trigger: CCCTTTCAGAAAGCAGAAGCAGAGATGGCTGCTGGGATGTTTGCAATTGGACCCCTGACTTGGAGAGAGACCAAATCTGCAACTAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS CCA 90 bp | CTGCTTCTGCTTTCTGAAAGGGTGGCTGTCCTGAGTCACTGCACTTaGGAGACTTCTCAAGCTTCGACAGTTCTTTTCCATCTTCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLSERVAVLSHCT*ETSQASTVLFHLPN Trigger: ATTCGGAAGATGGAAAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGGACAGCCACCCTTTCAGAAAGCAGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCAAGTCAGGGGTCCAATaGCAAACATCCCAGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WFITKFWFPTLHACVGSLKSGVQ*QTSQQP Trigger: TGGCTGCTGGGATGTTTGCAATTGGACCCCTGACTT...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CAA 90 bp | ATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATTCTAAGCAGTTTTCATCTAGGGAGGGGCTGCTCTaGAAGCTTTTCCCACACTCG | + |
|
Preference number: 5 (lower is better) Translates to: IKLDSTLCGGWNSKQFSSREGLL*KLFPHS Trigger: CGAGTGTGGGAAAAGCTTCAAGAGCAGCCCCTCCCT...AGATGAAAACTGCTTAGAATTCCATCCCCCACAAAGAGTGCTATCTAACTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | TGGTTTATCACTAAGTTTTGGTTTCCCACATTGCATGCATGCGTAGGCTCCCTCTCCTTAGTTGCAGATTaGGTCTCTCTCCAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WFITKFWFPTLHACVGSLSLVAD*VSLQVR Trigger: CCTGACTTGGAGAGAGACCAAATCTGCAACTAAGGA...GAGGGAGCCTACGCATGCATGCAATGTGGGAAACCAAAACTTAGTGATAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCTGTTCAGAGTTATACACAGGGCAAGTGAAATCATACACACACAGACAAGTCTAGCACTGAAGTaGACTCCTTGCTCTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLFRVIHRASEIIHTQTSLALK*TPCSQV Trigger: GACCTGAGAGCAAGGAGTCAACTTCAGTGCTAGACT...TGTCTGTGTGTGTATGATTTCACTTGCCCTGTGTATAACTCTGAACAGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | GTGCATTTAGTTAAGTTCATCAAGTTAGATAGCACTCTTTGTGGGGGATGGAATGAGCAGACATTTGTCTaGGGTACCTCTCCCGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHLVKFIKLDSTLCGGWNEQTFV*GTSPDF Trigger: GAAATCGGGAGAGGTACCCAAGACAAATGTCTGCTC...ATTCCATCCCCCACAAAGAGTGCTATCTAACTTGATGAACTTAACTAAATGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | TTCTTGACTGGGACCCAAAATCAAATAATACATTCACCCTTATCAACCTTTCAGTGGTGCTTAGTCAGATaGGCTCTGTGGCTGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLTGTQNQIIHSPLSTFQWCLVR*ALWLKD Trigger: GTCCTTCAGCCACAGAGCCAATCTGACTAAGCACCA...CTGAAAGGTTGATAAGGGTGAATGTATTATTTGATTTTGGGTCCCAGTCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCTGTTCAGAGTTATACACAGGGCAAGTGAAATCATACACACACAGACATCTATGAAGGTTTTCTaGCACTCGCCACACTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLFRVIHRASEIIHTQTSMKVF*HSPHSK Trigger: CTTCGAGTGTGGCGAGTGCAAGAAAACCTTCATAGA...TGTCTGTGTGTGTATGATTTCACTTGCCCTGTGTATAACTCTGAACAGCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | TATCAACCTTTCAGATATGTTCAAACTGCAACACACCCAGAGGGCTTTCTAAAACTGTTTGACTCTTCTTaGGAAAAGTCTAGCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YQPFRYVQTATHPEGFLKLFDSS*EKSSTE Trigger: TTCAGTGCTAGACTTTTCCAAAGAAGAGTCAAACAG...TTTTAGAAAGCCCTCTGGGTGTGTTGCAGTTTGAACATATCTGAAAGGTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAACAAAAATTTTGAGAACTCTAGCCAGAGGGCTTCACTATTATCAAGCTTTCTGTCAGTCTGTTaGACTCTTCTTTGGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TGNKNFENSSQRASLLSSFLSVC*TLLWKS Trigger: ACTTTTCCAAAGAAGAGTCAAACAGACTGACAGAAA...GCTTGATAATAGTGAAGCCCTCTGGCTAGAGTTCTCAAAATTTTTGTTCCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054654.13 |
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| CDS CCA 72 bp | CATATCCTGCCATTCCACTTCTCAGGCCTTCCATTCTaGAGCCCCATAGGCCTTTCTCCCCCAGTACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: HILPFHFSGLPF*SPIGLSPPVQR Trigger: TCGCTGTACTGGGGGAGAAAGGCCTATGGGGCTCCAGAATGGAAGGCCTGAGAAGTGGAATGGCAGGATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS GCA 72 bp | CTTCTGCTTTCTGAAAGGGTGGCTGTCCTGAGTCACTaGACTTGGGAGACTTCTCAAGCTTCGACAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLSERVAVLSH*TWETSQASTVL Trigger: AAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGGACAGCCACCCTTTCAGAAAGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS CCA 72 bp | CTTTCTGAAAGGGTGGCTGTCCTGAGTCACTGCACTTaGGAGACTTCTCAAGCTTCGACAGTTCTTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSERVAVLSHCT*ETSQASTVLFH Trigger: ATGGAAAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGGACAGCCACCCTTTCAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS CAA 72 bp | CCGTTCTCTGATAGCACAGCATCCTTAGTTGCAGATTaGGTCTCTCTCCAAGTCAGGGGTCCAATTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PFSDSTASLVAD*VSLQVRGPIAN Trigger: GTTTGCAATTGGACCCCTGACTTGGAGAGAGACCAAATCTGCAACTAAGGATGCTGTGCTATCAGAGAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS CAA 90 bp | TTTCCAAAGCCGTTCTCTGATAGCACAGCATCCTTAGTTGCAGATTaGGTCTCTCTCCAAGTCAGGGGTCCAATTGCAAACATCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FPKPFSDSTASLVAD*VSLQVRGPIANIPA Trigger: TGCTGGGATGTTTGCAATTGGACCCCTGACTTGGAGAGAGACCAAATCTGCAACTAAGGATGCTGTGCTATCAGAGAACGGCTTTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207597.2 |
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| CDS TCA 72 bp | AGGAAATCGAGGGGGATGAATATGAAGACGAATAGCTaGGTCACTGCACTTGGGAGACTTCTCAAGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: RKSRGMNMKTNS*VTALGRLLKLR Trigger: TCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAGCTATTCGTCTTCATATTCATCCCCCTCGATTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108705.8 |
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| CDS CCA 72 bp | GTTCTTTTCCATCTTCCGAATTATAGTTATCGGGTTTaGAAATGGGAAGCCAGAGCGAGACCAGGTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VLFHLPNYSYRV*KWEARARPGSC Trigger: ACAGGAACCTGGTCTCGCTCTGGCTTCCCATTTCCAAACCCGATAACTATAATTCGGAAGATGGAAAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054654.13 ENSMUST00000108705.8 ENSMUST00000207597.2 |
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