Pregenerated sensors for ZFP282 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025821Ensembl transcript IDs: ENSMUST00000061890.8
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCGGCAGAGGTAGGCAGTGTGTGCGGTGGGGACACTGCACTGGGCTaGAGCCCTGGTGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTG | + |
Preference number: 1 (lower is better) Translates to: PAEVGSVCGGDTALG*SPGAAWPHCSHVVL Trigger: CAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 90 bp | CCAGTGGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTaGCTTGCTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACC | + |
Preference number: 1 (lower is better) Translates to: PVASGVSEVCPNDSC*LAVPLGPSLATGST Trigger: GGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCCACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 90 bp | GGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTGCCTTaGTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTATG | + |
Preference number: 1 (lower is better) Translates to: GQWCVRGVSQRFLLP*CPSGTFPGHWVHPM Trigger: CATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 90 bp | GTACTGGGGTACCCAGGTCCACCCCTTGGAATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTCCAGCAGGAGGTGAGGAGAGGGCGG | + |
Preference number: 1 (lower is better) Translates to: VLGYPGPPLGIPCLE*NSCADFQQEVRRGR Trigger: CCGCCCTCTCCTCACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGTACCCCAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTaGCTACTCTGGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAA | + |
Preference number: 1 (lower is better) Translates to: STHLPSPPGQSLIPW*LLWQPVFPHPVPWE Trigger: TTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 90 bp | TGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTATGAGATaGGCTGGACTGTCCACTAGAGTTGGACAGTACTGGGGTACCCAG | + |
Preference number: 1 (lower is better) Translates to: CPSGTFPGHWVHPMR*AGLSTRVGQYWGTQ Trigger: CTGGGTACCCCAGTACTGTCCAACTCTAGTGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTaGGGTGCTGGGAGCCATGGAGTGATGCACCAAAATGAAAGGGAG | + |
Preference number: 1 (lower is better) Translates to: CLAMQDAEMETGPPG*GAGSHGVMHQNERE Trigger: CTCCCTTTCATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 90 bp | GCAGATGAGCAGGACAGAAGCAGAGCGCTCACAAACGTGGTGCCATaGAATGCTGGCCACCCACCACGCTCCCTAGCTGGGAGAGAAACA | + |
Preference number: 1 (lower is better) Translates to: ADEQDRSRALTNVVP*NAGHPPRSLAGRET Trigger: TGTTTCTCTCCCAGCTAGGGAGCGTGGTGGGTGGCCAGCATTTCATGGCACCACGTTTGTGAGCGCTCTGCTTCTGTCCTGCTCATCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 90 bp | TTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAAACTGGAGTA | + |
Preference number: 1 (lower is better) Translates to: LPSPPGQSLIPWWLL*QPVFPHPVPWETGV Trigger: TACTCCAGTTTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 90 bp | GAGGCTGCTCATATTACCTGTGGAAGGAGGGTGAAGGGTCACAGCTaGCCTCACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTT | + |
Preference number: 1 (lower is better) Translates to: EAAHITCGRRVKGHS*PHRRIQSALPPAPV Trigger: AACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATGAGCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 90 bp | CACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTaGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATTCCATTC | + |
Preference number: 1 (lower is better) Translates to: HTWGWRDAFLQKTWI*FLAPTLGRGPFIPF Trigger: GAATGGAATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 90 bp | TACACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTaGATTTGGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATT | + |
Preference number: 1 (lower is better) Translates to: YTHTWGWRDAFLQKT*IWFLAPTLGRGPFI Trigger: AATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 90 bp | TTGTATATAATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAACTaGCTGGGGGCAGAGCACACCCGTGGTGTCTTGCCTGTGTTGCCT | + |
Preference number: 1 (lower is better) Translates to: LYIILDMPVCIRGRN*LGAEHTRGVLPVLP Trigger: AGGCAACACAGGCAAGACACCACGGGTGTGCTCTGCCCCCAGTCAGTTTCTACCTCTTATACACACTGGCATGTCTAAAATTATATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 90 bp | ATAATAATTCATTTTCCTAAGATTAGTCTCTTTCAAAATGCTGAGTaGAGGAGCAAAGAAAGAAATCCCAGTTCCATGGGTCGCAGTTCA | + |
Preference number: 1 (lower is better) Translates to: IIIHFPKISLFQNAE*RSKERNPSSMGRSS Trigger: TGAACTGCGACCCATGGAACTGGGATTTCTTTCTTTGCTCCTTCACTCAGCATTTTGAAAGAGACTAATCTTAGGAAAATGAATTATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGAGAGGGCGGGGAGGTaGGCTGAGAACGGTGGGGCA | + |
Preference number: 2 (lower is better) Translates to: CLAMQDAEMETGPPGCGAERAGR*AENGGA Trigger: TGCCCCACCGTTCTCAGCGCACCTCCCCGCCCTCTC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | TGGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTGCCTaGCTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTAT | + |
Preference number: 2 (lower is better) Translates to: WPVVCPRCVPTIPAA*LSLWDLPWPLGPPY Trigger: ATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCGGGCTGGAGCCCTGGTaGGGCTTGGCCGCACTGTTC | + |
Preference number: 2 (lower is better) Translates to: APAGSEHSRSVSMSVSTIGLEPW*GLAALF Trigger: GAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCC...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCCCAACGATTCCTGCTaGCTTGCTGTCCCTCTGGGA | + |
Preference number: 2 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNPNDSC*LAVPLG Trigger: TCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCCCAGGTCCACCCCTTaGAATACCCTGTCTGGAGTG | + |
Preference number: 2 (lower is better) Translates to: CLAMQDAEMETGPPGCGAPRSTP*NTLSGV Trigger: CACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTACCCAGAAAACCAGTTaGCTCTGGAGGGCCTGGCTT | + |
Preference number: 2 (lower is better) Translates to: CLAMQDAEMETGPPGCGATQKTS*LWRAWL Trigger: AAGCCAGGCCCTCCAGAGGCAACTGGTTTTCTGGGT...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGGAGTGCAATTCCTGTaGCGATTTCCAGCAGGAGGT | + |
Preference number: 2 (lower is better) Translates to: CLAMQDAEMETGPPGCGAGVQFL*RFPAGG Trigger: ACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATAGTTACCCCAGGAGTTaGCCCCTGTTGCTTCTGAGA | + |
Preference number: 2 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNSYPRS*PLLLLR Trigger: TCTCAGAAGCAACAGGGGCCAACTCCTGGGGTAACT...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTAGTAAACCATCAGGGTaGGGTCTGACCCAGAAAACC | + |
Preference number: 2 (lower is better) Translates to: QCLAMQDAEMETGPPGCGSKPSG*GLTQKT Trigger: GGTTTTCTGGGTCAGACCTCACCCTGATGGTTTACT...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGGCGGGGAGGTGCGCTaGGAACGGTGGGGCAGGAGA | + |
Preference number: 2 (lower is better) Translates to: WETLVHSHNKITIQPIAGGGEVR*ERWGRR Trigger: TCTCCTGCCCCACCGTTCTCAGCGCACCTCCCCGCC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGTCTGGTCGCTTTCCCTaGTCAGAATCTGTAACCCCA | + |
Preference number: 2 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWSGRFP*SESVTP Trigger: TGGGGTTACAGATTCTGATCAGGGAAAGCGACCAGA...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGCAGAGCAGCGCAGATaGGCAGGACAGAAGCAGAGC | + |
Preference number: 2 (lower is better) Translates to: AQVWKSLEAALSTGGFSLAEQRR*AGQKQS Trigger: GCTCTGCTTCTGTCCTGCTCATCTGCGCTGCTCTGC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTC | + |
Preference number: 2 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWIPCLE*NSCADF Trigger: GAAATCGGCACAGGAATTGCACTCCAGACAGGGTAT...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGAGGTAGGCAGTGTGTaGGGTGGGGACACTGCACTG | + |
Preference number: 2 (lower is better) Translates to: QTSCLGQIAQVWKSLEAAEVGSV*GGDTAL Trigger: CAGTGCAGTGTCCCCACCGCACACACTGCCTACCTC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTCTCTGGGACCTTCCCTaGCCACTGGGTCCACCCTAT | + |
Preference number: 2 (lower is better) Translates to: PSHAKPRHFTAHQVPIPSLWDLP*PLGPPY Trigger: ATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAG...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGCGATTCCTGCTGCCTTaGTGTCCCTCTGGGACCTTC | + |
Preference number: 2 (lower is better) Translates to: CGLAALFSCGLAKQLSHLRFLLP*CPSGTF Trigger: GAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCG...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCTCCACACCGCAGATTTaGTCTCCTTTTCAGGATGTC | + |
Preference number: 2 (lower is better) Translates to: APAGSEHSRSVSMSVSTISTPQI*SPFQDV Trigger: GACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGA...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGCCTTGCTGTCCCTCTaGGACCTTCCCTGGCCACTG | + |
Preference number: 2 (lower is better) Translates to: WETLVHSHNKITIQPIAGALLSL*DLPWPL Trigger: CAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCAC | + |
Preference number: 2 (lower is better) Translates to: STRGVGKPFLTQTRVLGHPWWLL*QPVFPH Trigger: GTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTACCACGCTCCCTAGCTaGGAGAGAAACAGGATCCAC | + |
Preference number: 2 (lower is better) Translates to: QTSCLGQIAQVWKSLEAATTLPS*ERNRIH Trigger: GTGGATCCTGTTTCTCTCCCAGCTAGGGAGCGTGGT...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR GCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCCCAGTGCCTGGCCATaGAAGATGCTGAAATGGAGA | + |
Preference number: 2 (lower is better) Translates to: STRGVGKPFLTQTRVLGHPSAWP*KMLKWR Trigger: TCTCCATTTCAGCATCTTGCATGGCCAGGCACTGGG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATGGGTTGGAGACTCTCTaGTCGCTTTCCCTGATCAGA | + |
Preference number: 2 (lower is better) Translates to: STRGVGKPFLTQTRVLGHGLETL*SLSLIR Trigger: TCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCC...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | GAGGATGTTACCCTTAGCGCTTCCCTCAGCTTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGTCTCCTCACCTTCAGGATGGATCAT | + |
Preference number: 2 (lower is better) Translates to: EDVTLSASLSFHTAD*LSFSGCLLTFRMDH Trigger: ATGATCCATCCTGAAGGTGAGGAGACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAAGCTGAGGGAAGCGCTAAGGGTAACATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | GTGGGTAGTACAACCCACCAGATAGGGTTCCAGAGAACAGGAGTCTaGGCTGTCAATAGCTCCATCACCATACCTCTTTGGGAATCAGCT | + |
Preference number: 2 (lower is better) Translates to: VGSTTHQIGFQRTGV*AVNSSITIPLWESA Trigger: AGCTGATTCCCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGACTCCTGTTCTCTGGAACCCTATCTGGTGGGTTGTACTACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | ACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTaGGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATTCCATT | + |
Preference number: 2 (lower is better) Translates to: THLGLERCVLTEDLD*VLSTHIRKGPIHSI Trigger: AATGGAATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | TTGTTGGAGAGAACAGACTCTACCTTTATGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTGCTCTGTACCA | + |
Preference number: 2 (lower is better) Translates to: LLERTDSTFMAPQHP*SLSTLEQCGLCSVP Trigger: TGGTACAGAGCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | ACAACTATCTCACCTGTGTCTCACTCTCCTCAGTTACCACATCAGGAAAACCCTACTGGGTCCACCCTATaGGATGAGCTGGACTGTCCA | + |
Preference number: 2 (lower is better) Translates to: TTISPVSHSPQLPHQENPTGSTL*DELDCP Trigger: TGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGT...AGGGTTTTCCTGATGTGGTAACTGAGGAGAGTGAGACACAGGTGAGATAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATTTTCTCAGAAGGGGTTaGAGACTCTCTGGTCGCTTT | + |
Preference number: 2 (lower is better) Translates to: STRGVGKPFLTQTRVLGHFLRRG*RLSGRF Trigger: AAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAA...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | CTCCTCACCTTCAGGATGGATCATATTTCCTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTTTCCCTGATCAGAATCTGTAACCCC | + |
Preference number: 2 (lower is better) Translates to: LLTFRMDHISFSQKG*ETLWSLSLIRICNP Trigger: GGGGTTACAGATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAAGGAAATATGATCCATCCTGAAGGTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CCA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATACTTGCCCAGCCCTCCTaGACAGAGTCTCATTCCTTG | + |
Preference number: 2 (lower is better) Translates to: PFIPFIQSVVVGSTTHQILAQPS*TESHSL Trigger: CAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAG...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 90 bp | GCTGACCTCACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTaGTATATAATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAAC | + |
Preference number: 2 (lower is better) Translates to: ADLTGEFNQPSRLPQ*YIILDMPVCIRGRN Trigger: GTTTCTACCTCTTATACACACTGGCATGTCTAAAATTATATACAACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACACCAGAAAGGCCAGGTaGGATCGGTCTGAGACCGGC | + |
Preference number: 2 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDTRKAR*DRSETG Trigger: GCCGGTCTCAGACCGATCTCACCTGGCCTTTCTGGT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR TCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGCACCTGACTGAATaGTCAGAATTGAGAAATACA | + |
Preference number: 2 (lower is better) Translates to: QTSCLGQIAQVWKSLEAALHLTE*SELRNT Trigger: TGTATTTCTCAATTCTGATCATTCAGTCAGGTGCAG...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR-3UTR CCA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGGAATACCCTGTCTaGAGTGCAATTCCTGTGCCG | + |
Preference number: 2 (lower is better) Translates to: PFIPFIQSVVVGSTTHQILEYPV*SAIPVP Trigger: CGGCACAGGAATTGCACTCCAGACAGGGTATTCCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATTCCTCACCTTCAGGATaGATCATATTTCCTTTTCTC | + |
Preference number: 2 (lower is better) Translates to: STRGVGKPFLTQTRVLGHSSPSG*IIFPFL Trigger: GAGAAAAGGAAATATGATCCATCCTGAAGGTGAGGA...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR-3UTR TCA 90 bp | ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGCTGAATGATCAGAATTaGGAAATACAGGTTGGGGAC | + |
Preference number: 2 (lower is better) Translates to: MLHSKKSNQLSGTNSTGLLNDQN*EIQVGD Trigger: GTCCCCAACCTGTATTTCTCAATTCTGATCATTCAG...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR-3UTR TCA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACTGGGAAAGCCGTTTTTaGCACAAACAAGGGTCCTGG | + |
Preference number: 2 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDWESRF*HKQGSW Trigger: CCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCA...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR-3UTR GCA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACCCAGCTTTGGGAACATaGAATCTGCAATCTGGATAC | + |
Preference number: 2 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDPALGT*NLQSGY Trigger: GTATCCAGATTGCAGATTGCATGTTCCCAAAGCTGG...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR GCA 72 bp | ACCGGCAGAGGTAGGCAGTGTGTGCGGTGGGGACACTaGACTGGGCTGGAGCCCTGGTGCGGCTTGGCCGCA | + |
Preference number: 3 (lower is better) Translates to: TGRGRQCVRWGH*TGLEPWCGLAA Trigger: TGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | CGGTCTGAGACCGGCAGAGGTAGGCAGTGTGTGCGGTaGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGC | + |
Preference number: 3 (lower is better) Translates to: RSETGRGRQCVR*GHCTGLEPWCG Trigger: GCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGGTCTCAGACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR CCA 72 bp | GTAGGCAGTGTGTGCGGTGGGGACACTGCACTGGGCTaGAGCCCTGGTGCGGCTTGGCCGCACTGTTCTCAT | + |
Preference number: 3 (lower is better) Translates to: VGSVCGGDTALG*SPGAAWPHCSH Trigger: ATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGAGCCCTGGTGCGGCTaGGCCGCACTGTTCTCATGT | + |
Preference number: 3 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWEPWCG*AALFSC Trigger: ACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR CCA 72 bp | GGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGCTTaGCCGCACTGTTCTCATGTGGTCTTGCTAAACAAC | + |
Preference number: 3 (lower is better) Translates to: GDTALGWSPGAA*PHCSHVVLLNN Trigger: GTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCGACCCAGAAAACCAGTaGCCTCTGGAGGGCCTGGCT | + |
Preference number: 3 (lower is better) Translates to: STHLPSPPGQSLIPWWLLDPENQ*PLEGLA Trigger: AGCCAGGCCCTCCAGAGGCAACTGGTTTTCTGGGTC...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
||
3UTR TCA 72 bp | CTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATaGAAGGGAGTCCTTTGGGCGCTTCCCAAGGCGCCT | + |
Preference number: 3 (lower is better) Translates to: LRCWEPWSDAPK*KGVLWALPKAP Trigger: AGGCGCCTTGGGAAGCGCCCAAAGGACTCCCTTTCATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCACCCAGGTCCACCCCTaGGAATACCCTGTCTGGAGT | + |
Preference number: 3 (lower is better) Translates to: STHLPSPPGQSLIPWWLLTQVHP*EYPVWS Trigger: ACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGT...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATATTGAGAAATACAGGTaGGGGACCAGGATGCTAGGG | + |
Preference number: 3 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNIEKYR*GTRMLG Trigger: CCCTAGCATCCTGGTCCCCAACCTGTATTTCTCAAT...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGGCTCTAGCACCCACTaGCCCAGCCCTCCTGGACAG | + |
Preference number: 3 (lower is better) Translates to: QTSCLGQIAQVWKSLEAAGSSTH*PSPPGQ Trigger: CTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | GGGACCTTCCCTGGCCACTGGGTCCACCCTATGAGATaGGCTGGACTGTCCACTAGAGTTGGACAGTACTGG | + |
Preference number: 3 (lower is better) Translates to: GTFPGHWVHPMR*AGLSTRVGQYW Trigger: CCAGTACTGTCCAACTCTAGTGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGTGGCCAGGGAAGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | CCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAA | + |
Preference number: 3 (lower is better) Translates to: PPGQSLIPWWLL*QPVFPHPVPWE Trigger: TTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | TTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTaGCTACTCTGGCAGCCAGTCTTTCCTCACCCTGTG | + |
Preference number: 3 (lower is better) Translates to: LPSPPGQSLIPW*LLWQPVFPHPV Trigger: CACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | CACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTaGTGGCTACTCTGGCAGCCAGTCTTTCCTCACCCT | + |
Preference number: 3 (lower is better) Translates to: HLPSPPGQSLIP*WLLWQPVFPHP Trigger: AGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 72 bp | TACCCAGGTCCACCCCTTGGAATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTCCAGCAGGAGGTGAGG | + |
Preference number: 3 (lower is better) Translates to: YPGPPLGIPCLE*NSCADFQQEVR Trigger: CCTCACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | GCCATGAAATGCTGGCCACCCACCACGCTCCCTAGCTaGGAGAGAAACAGGATCCACAAGAGGAGTGGGAAA | + |
Preference number: 3 (lower is better) Translates to: AMKCWPPTTLPS*ERNRIHKRSGK Trigger: TTTCCCACTCCTCTTGTGGATCCTGTTTCTCTCCCAGCTAGGGAGCGTGGTGGGTGGCCAGCATTTCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTATGAAAGGGAGTCCTTaGGGCGCTTCCCAAGGCGCC | + |
Preference number: 3 (lower is better) Translates to: AQVWKSLEAALSTGGFSLMKGSP*GASQGA Trigger: GGCGCCTTGGGAAGCGCCCAAAGGACTCCCTTTCAT...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | CTCAGAAGGGGTTGGAGACTCTCTGGTCGCTTTCCCTaGTCAGAATCTGTAACCCCAGTGGCCAGTGGTGTG | + |
Preference number: 3 (lower is better) Translates to: LRRGWRLSGRFP*SESVTPVASGV Trigger: CACACCACTGGCCACTGGGGTTACAGATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTACGATTCCTGCTGCCTaGCTGTCCCTCTGGGACCTT | + |
Preference number: 3 (lower is better) Translates to: QTSCLGQIAQVWKSLEAATIPAA*LSLWDL Trigger: AAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGT...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | CATATTACCTGTGGAAGGAGGGTGAAGGGTCACAGCTaGCCTCACAGGAGAATTCAATCAGCCCTCCCGCCT | + |
Preference number: 3 (lower is better) Translates to: HITCGRRVKGHS*PHRRIQSALPP Trigger: AGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | GCACCGAGGCTGCTCATATTACCTGTGGAAGGAGGGTaGAGGGTCACAGCTGACCTCACAGGAGAATTCAAT | + |
Preference number: 3 (lower is better) Translates to: APRLLILPVEGG*RVTADLTGEFN Trigger: ATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATGAGCAGCCTCGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | ACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTaGATTTGGTTCTTAGCACCCACATTAGGAAGGGGC | + |
Preference number: 3 (lower is better) Translates to: TWGWRDAFLQKT*IWFLAPTLGRG Trigger: GCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | AGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTaGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGT | + |
Preference number: 3 (lower is better) Translates to: SQTSCLGQIAQV*KSLEAALSTGG Trigger: ACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | ACCAAGCCGCACTGGGTGGATCCATCTTTGGTTTGTTaGAGAGAACAGACTCTACCTTTATGGCTCCCCAGC | + |
Preference number: 3 (lower is better) Translates to: TKPHWVDPSLVC*REQTLPLWLPS Trigger: GCTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 72 bp | CCCTTGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTaGTCTGTACCAGGAGTGTGTAGTAGCAGTGCAGAG | + |
Preference number: 3 (lower is better) Translates to: PLSLSTLEQCGL*SVPGVCSSSAE Trigger: CTCTGCACTGCTACTACACACTCCTGGTACAGAGCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | GGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTaGTTCTTAGCACCCACATTAGGAAGGGGCCCATTC | + |
Preference number: 3 (lower is better) Translates to: GWRDAFLQKTWI*FLAPTLGRGPF Trigger: GAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | CAAGACAGACAGACATCACACACATACACACACACCTaGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGG | + |
Preference number: 3 (lower is better) Translates to: QDRQTSHTYTHT*GWRDAFLQKTW Trigger: CCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGATGTCTGTCTGTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | GCTCACTCACCAAGCCGCACTGGGTGGATCCATCTTTaGTTTGTTGGAGAGAACAGACTCTACCTTTATGGC | + |
Preference number: 3 (lower is better) Translates to: AHSPSRTGWIHL*FVGENRLYLYG Trigger: GCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGAGGAGTTGGCCCCTGTaGCTTCTGAGAGGATTTGGG | + |
Preference number: 3 (lower is better) Translates to: MLHSKKSNQLSGTNSTGLRSWPL*LLRGFG Trigger: CCCAAATCCTCTCAGAAGCAACAGGGGCCAACTCCT...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAG | + |
Preference number: 3 (lower is better) Translates to: WETLVHSHNKITIQPIAGAPQHP*SLSTLE Trigger: CTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | ATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAACTaGCTGGGGGCAGAGCACACCCGTGGTGTCTTGCCT | + |
Preference number: 3 (lower is better) Translates to: ILDMPVCIRGRN*LGAEHTRGVLP Trigger: AGGCAAGACACCACGGGTGTGCTCTGCCCCCAGTCAGTTTCTACCTCTTATACACACTGGCATGTCTAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | AACCATGAGGACTCAGGCCCTGAGCTTGACATTCTCTaGGCTGATCAGTGTCACATAGCAGTTCTCAGAGGA | + |
Preference number: 3 (lower is better) Translates to: NHEDSGPELDIL*ADQCHIAVLRG Trigger: TCCTCTGAGAACTGCTATGTGACACTGATCAGCTCAGAGAATGTCAAGCTCAGGGCCTGAGTCCTCATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | AGACAGACATCACACACATACACACACACCTGGGGCTaGAGAGATGCGTTCTTACAGAAGACCTGGATTTGG | + |
Preference number: 3 (lower is better) Translates to: RQTSHTYTHTWG*RDAFLQKTWIW Trigger: CCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGATGTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR TCA 72 bp | TTGTGCAGTGAGAAGCTGCTGCTGCACCTGACTGAATaGTCAGAATTGAGAAATACAGGTTGGGGACCAGGA | + |
Preference number: 3 (lower is better) Translates to: LCSEKLLLHLTE*SELRNTGWGPG Trigger: TCCTGGTCCCCAACCTGTATTTCTCAATTCTGATCATTCAGTCAGGTGCAGCAGCAGCTTCTCACTGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 72 bp | ATCACACACATACACACACACCTGGGGCTGGAGAGATaGGTTCTTACAGAAGACCTGGATTTGGTTCTTAGC | + |
Preference number: 3 (lower is better) Translates to: ITHIHTHLGLER*VLTEDLDLVLS Trigger: GCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTT | + |
Preference number: 3 (lower is better) Translates to: WETLVHSHNKITIQPIAGFSQKG*ETLWSL Trigger: AAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAA...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGTGGGAAAGCCGTTTTaGACACAAACAAGGGTCCTG | + |
Preference number: 3 (lower is better) Translates to: WETLVHSHNKITIQPIAGVGKPF*TQTRVL Trigger: CAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCAC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CCA 72 bp | GTCTTGGCTGTCAATAGCTCCATCACCATACCTCTTTaGGAATCAGCTTCTTGCGGGGCAAAAGAAAGGAAT | + |
Preference number: 3 (lower is better) Translates to: VLAVNSSITIPL*ESASCGAKERN Trigger: ATTCCTTTCTTTTGCCCCGCAAGAAGCTGATTCCCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGT | + |
Preference number: 3 (lower is better) Translates to: PFIPFIQSVVVGSTTHQIFHTAD*LSFSGC Trigger: ACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGGGAATCAGCTTCTaGCGGGGCAAAAGAAAGGAA | + |
Preference number: 3 (lower is better) Translates to: PFIPFIQSVVVGSTTHQILGISF*RGKRKE Trigger: TTCCTTTCTTTTGCCCCGCAAGAAGCTGATTCCCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR-3UTR CAA 90 bp | ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTGTTCTCATGTGGTCTaGCTAAACAACTATCTCACC | + |
Preference number: 3 (lower is better) Translates to: MLHSKKSNQLSGTNSTGLCSHVV*LNNYLT Trigger: GGTGAGATAGTTGTTTAGCAAGACCACATGAGAACA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR GCA 72 bp | TTATTTCCACTATTTAAGACTTTACATTTAAACAGGTaGACACATACACCCCAAGACAGACAGACATCACAC | + |
Preference number: 3 (lower is better) Translates to: LFPLFKTLHLNR*THTPQDRQTSH Trigger: GTGTGATGTCTGTCTGTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGCCGCTCACCGCGGTaGGTCATCTGGTGGCGGATG | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWGRSPR*VIWWRM Trigger: CATCCGCCACCAGATGACGCACCGCGGTGAGCGGCC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGC | + |
Preference number: 4 (lower is better) Translates to: APAGSEHSRSVSMSVSTISAGSW*QTSSGG Trigger: GCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCT...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCTCTTCCCTGGGTTCTaGCTGGACCGGAGGGTCTGG | + |
Preference number: 4 (lower is better) Translates to: CLAMQDAEMETGPPGCGALFPGF*LDRRVW Trigger: CCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCCGCGGTGCGTCATCTaGTGGCGGATGAGGCCAGAG | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWPRCVI*WRMRPE Trigger: CTCTGGCCTCATCCGCCACCAGATGACGCACCGCGG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGTTGGGTTTGGGGCTaGGCAGAAGATGGGGGTGGG | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWGWVWG*AEDGGG Trigger: CCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTCACAAGGCTCTTCCCTaGGTTCTGCCTGGACCGGAG | + |
Preference number: 4 (lower is better) Translates to: QCLAMQDAEMETGPPGCGHKALP*VLPGPE Trigger: CTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTG...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATGCAGCAGGCTGTCACTaGGCCCAGAGTCCAGTCCAA | + |
Preference number: 4 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNAAGCH*AQSPVQ Trigger: TTGGACTGGACTCTGGGCCCAGTGACAGCCTGCTGC...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCGGTGCGTCATCTGGTaGCGGATGAGGCCAGAGTGG | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWRCVIW*RMRPEW Trigger: CCACTCTGGCCTCATCCGCCACCAGATGACGCACCG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGGTTCTGCTTTCGGATaGAGCTCTTGCCGCAGAGCG | + |
Preference number: 4 (lower is better) Translates to: CLAMQDAEMETGPPGCGAGSAFG*SSCRRA Trigger: CGCTCTGCGGCAAGAGCTTCATCCGAAAGCAGAACC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCCCCATGGGTACGGCTaGTCTTCCTGCTTGATCCAG | + |
Preference number: 4 (lower is better) Translates to: CLAMQDAEMETGPPGCGAPHGYG*SSCLIQ Trigger: CTGGATCAAGCAGGAAGAGCAGCCGTACCCATGGGG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGCCAGAGTGGCAGTTaGAGCTCTTCTCGCACTCTG | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWGQSGS*SSSRTL Trigger: CAGAGTGCGAGAAGAGCTTCAACTGCCACTCTGGCC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCCAGAGCGAGATCTCTaGTGTGGGCAACTGGGGCTC | + |
Preference number: 4 (lower is better) Translates to: STHLPSPPGQSLIPWWLLPERDL*CGQLGL Trigger: GAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATTCTCTGCTGTGCCTGTaGGTCCCTCCAAGTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNSLLCL*VPPSSA Trigger: TGCTGAACTTGGAGGGACGCACAGGCACAGCAGAGA...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTTCTTCTCTGCTGTaGCTGTGCGTCCCTCCAAGT | + |
Preference number: 4 (lower is better) Translates to: QCLAMQDAEMETGPPGCGASSLL*LCVPPS Trigger: ACTTGGAGGGACGCACAGGCACAGCAGAGAAGAAGC...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | ACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTGGTTCCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGG | + |
Preference number: 4 (lower is better) Translates to: THTWGWRDAFLQKTWIWFRSAGS*WQTSSG Trigger: CCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACG...GAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGG | + |
Preference number: 4 (lower is better) Translates to: STHLPSPPGQSLIPWWLLSAVGN*GSRIMR Trigger: CCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGA...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | TGGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGCTaGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAA | + |
Preference number: 4 (lower is better) Translates to: WGHCTGLEPWCG*AALFSCGLAKQ Trigger: TTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | CCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTaGGTGGCTACTCTGGCAGCCAGTCTTTCCTCACCC | + |
Preference number: 4 (lower is better) Translates to: PLAQPSWTESHS*VATLAASLSSP Trigger: GGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAGGTCACCGGGACCTTaGGGGCCTCCCCCTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: STRGVGKPFLTQTRVLGHRSPGP*GPPPCC Trigger: GCAGCAAGGGGGAGGCCCCCAAGGTCCCGGTGACCT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCCCGGAGGGTCTGGCTTaGACACTGGGCCATCTGTGT | + |
Preference number: 4 (lower is better) Translates to: APAGSEHSRSVSMSVSTIPEGLA*TLGHLC Trigger: ACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGG...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCGTATGGTCGTTCCTTaGTGTGGCTGCGGTGATGAA | + |
Preference number: 4 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNRMVVP*CGCGDE Trigger: TTCATCACCGCAGCCACACCAAGGAACGACCATACG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTCTGCGCACTCGTATaGTCGTTCCTTGGTGTGGCT | + |
Preference number: 4 (lower is better) Translates to: GSSTHLPSPPGQSLIPWWLCALV*SFLGVA Trigger: AGCCACACCAAGGAACGACCATACGAGTGCGCAGAG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGGCCCCAAACCCTGGATaGCCAGCTGCTGAGGCTGCG | + |
Preference number: 4 (lower is better) Translates to: CGLAALFSCGLAKQLSHLAPNPG*PAAEAA Trigger: CGCAGCCTCAGCAGCTGGGCATCCAGGGTTTGGGGC...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGAGGCCCGGGCCATTGTaGACGCGCAGGTGGTCCTTG | + |
Preference number: 4 (lower is better) Translates to: CGLAALFSCGLAKQLSHLRPGPL*TRRWSL Trigger: CAAGGACCACCTGCGCGTGCACAATGGCCCGGGCCT...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCGGAAAGGGCGGGAACTaGAAAGGCATTGGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: APAGSEHSRSVSMSVSTIGKGGN*KGIGLL Trigger: CAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCC...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGCTCTTCCTGCTTaGTCCAGGACAAAATGTCAT | + |
Preference number: 4 (lower is better) Translates to: QCLAMQDAEMETGPPGCGAALPA*SRTKCH Trigger: ATGACATTTTGTCCTGGATCAAGCAGGAAGAGCAGC...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGCTGCGCGCGCCGTaGGCAAGGAGGCTCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: PFIPFIQSVVVGSTTHQILLRAP*ARRLRR Trigger: GCGGCGGAGCCTCCTTGCTCACGGCGCGCGCAGCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGGCAAGAGTAGGGCTTaGTGCGCGCGCCGTGAGCAA | + |
Preference number: 4 (lower is better) Translates to: QTSCLGQIAQVWKSLEAAGKSRA*CARREQ Trigger: TTGCTCACGGCGCGCGCAGCAAGCCCTACTCTTGCC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: STHLPSPPGQSLIPWWLLRRRWG*VLYKQQ Trigger: CTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | ACAACTATCTCACCTGTGTCTCACTCTCCTCAGTTACCACATCAGGAAAACCCTCTTTCTGGTGGCACCTaGAGTGGCCGCGGGGCCCCC | + |
Preference number: 4 (lower is better) Translates to: TTISPVSHSPQLPHQENPLSGGT*SGRGAP Trigger: GGGGGCCCCGCGGCCACTCCAGGTGCCACCAGAAAG...AGGGTTTTCCTGATGTGGTAACTGAGGAGAGTGAGACACAGGTGAGATAGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATTGCTTTAGCAGGTTCTaGTTTCGGATGAAGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNCFSRF*FRMKLL Trigger: CAAGAGCTTCATCCGAAAGCAGAACCTGCTAAAGCA...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGCGAGATCTCTGCTGTaGGCAACTGGGGCTCACGCA | + |
Preference number: 4 (lower is better) Translates to: QTSCLGQIAQVWKSLEAAARSLL*ATGAHA Trigger: TGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTATTCTTGAGCCTGCATaGGCGGCATTCCCTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: PSHAKPRHFTAHQVPIPSILEPA*AAFPRP Trigger: TGGCCGAGGGAATGCCGCCCATGCAGGCTCAAGAAT...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTTGGATTCTGTGGGGATaGCTCTGTCTTCCAGGCCCC | + |
Preference number: 4 (lower is better) Translates to: QTSCLGQIAQVWKSLEAAWILWG*LCLPGP Trigger: GGGGCCTGGAAGACAGAGCCATCCCCACAGAATCCA...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | ACCCTTAGCGCTTCCCTCAGCTTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGTCTCCTCACCTTCAGG | + |
Preference number: 4 (lower is better) Translates to: TLSASLSFHTAD*LSFSGCLLTFR Trigger: CCTGAAGGTGAGGAGACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAAGCTGAGGGAAGCGCTAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTTCCATGTCCCATTCTTaGGCCTGCATGGGCGGCATT | + |
Preference number: 4 (lower is better) Translates to: PSHAKPRHFTAHQVPIPSSMSHS*ACMGGI Trigger: AATGCCGCCCATGCAGGCTCAAGAATGGGACATGGA...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGACAGGGGCCCTATCTaGAAAGGGCGGGAACTGAAA | + |
Preference number: 4 (lower is better) Translates to: AQVWKSLEAALSTGGFSLDRGPI*KGRELK Trigger: TTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTCTTCCAGGCCCCTCTaGCCCCGAACACACAGGGCT | + |
Preference number: 4 (lower is better) Translates to: MLHSKKSNQLSGTNSTGLSSRPL*PRTHRA Trigger: AGCCCTGTGTGTTCGGGGCCAGAGGGGCCTGGAAGA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | ACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTGGTTCTTGTGCACGCGCAGGTaGTCCTTGAGTGACTCCTTG | + |
Preference number: 4 (lower is better) Translates to: THTWGWRDAFLQKTWIWFLCTRR*SLSDSL Trigger: CAAGGAGTCACTCAAGGACCACCTGCGCGTGCACAA...GAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | CACCAAGCCGCACTGGGTGGATCCATCTTTGGTTTGTaGGAGAGAACAGACTCTACCTTTATGGCTCCCCAG | + |
Preference number: 4 (lower is better) Translates to: HQAALGGSIFGL*ERTDSTFMAPQ Trigger: CTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTCTCTCTGCCAAATCCTaGTGGTCCCATACACACTGC | + |
Preference number: 4 (lower is better) Translates to: PSHAKPRHFTAHQVPIPSLSAKS*WSHTHC Trigger: GCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAG...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATAGGGGCTCACGCATCATaGGGTCAGGAAAGACAGGGG | + |
Preference number: 4 (lower is better) Translates to: PFIPFIQSVVVGSTTHQIGAHAS*GQERQG Trigger: CCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCC...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGG | + |
Preference number: 4 (lower is better) Translates to: CGLAALFSCGLAKQLSHLCVCSH*DFSLFG Trigger: CCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACA...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTTCTGCCAAATCCTGCTaGTCCCATACACACTGCTGT | + |
Preference number: 4 (lower is better) Translates to: AQVWKSLEAALSTGGFSLSAKSC*SHTHCC Trigger: ACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGA...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | GGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTaGGTTCTTAGCACCCACATTAGGAAGGGGCCCATT | + |
Preference number: 4 (lower is better) Translates to: GLERCVLTEDLD*VLSTHIRKGPI Trigger: AATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | AGAACAGACTCTACCTTTATGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTGC | + |
Preference number: 4 (lower is better) Translates to: RTDSTFMAPQHP*SLSTLEQCGLC Trigger: GCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGCCATAAAGGTAGAGTCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | ACTCACCAAGCCGCACTGGGTGGATCCATCTTTGGTTaGTTGGAGAGAACAGACTCTACCTTTATGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: THQAALGGSIFG*LERTDSTFMAP Trigger: GGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTCTCTCTCTTCGGGGTaGTGCTGCTCCCACACACAA | + |
Preference number: 4 (lower is better) Translates to: MLHSKKSNQLSGTNSTGLSLSSG*CCSHTQ Trigger: TTGTGTGTGGGAGCAGCATCACCCCGAAGAGAGAGA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCACTGCTGTTCTTCCTaGTTAATCCGGGACAAAAGG | + |
Preference number: 4 (lower is better) Translates to: STRGVGKPFLTQTRVLGHHCCSS*LIRDKR Trigger: CCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTTACGGCTGCTCTTCCTaGTTGATCCAGGACAAAATG | + |
Preference number: 4 (lower is better) Translates to: PSHAKPRHFTAHQVPIPSYGCSS*LIQDKM Trigger: CATTTTGTCCTGGATCAAGCAGGAAGAGCAGCCGTA...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAAGGCATTGGTCTCCTaGCATCCATGTCCCATTCTT | + |
Preference number: 4 (lower is better) Translates to: STRGVGKPFLTQTRVLGHKALVS*HPCPIL Trigger: AAGAATGGGACATGGATGCCAGGAGACCAATGCCTT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGAACTGAAAAGGCATTaGTCTCCTGGCATCCATGTC | + |
Preference number: 4 (lower is better) Translates to: AQVWKSLEAALSTGGFSLELKRH*SPGIHV Trigger: GACATGGATGCCAGGAGACCAATGCCTTTTCAGTTC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGCGGATGAGGCCAGAGTaGCAGTTGAAGCTCTTCTCG | + |
Preference number: 4 (lower is better) Translates to: WETLVHSHNKITIQPIAGRMRPE*QLKLFS Trigger: CGAGAAGAGCTTCAACTGCCACTCTGGCCTCATCCG...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | AAAGAAAGAAATCCCAGTTCCATGGGTCGCAGTTCATaGAGGTCTGCTGTAGGATGTCACACTAGCGGACCC | + |
Preference number: 4 (lower is better) Translates to: KERNPSSMGRSS*RSAVGCHTSGP Trigger: GGGTCCGCTAGTGTGACATCCTACAGCAGACCTCAATGAACTGCGACCCATGGAACTGGGATTTCTTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | ACAACCCACCAGATAGGGTTCCAGAGAACAGGAGTCTaGGCTGTCAATAGCTCCATCACCATACCTCTTTGG | + |
Preference number: 4 (lower is better) Translates to: TTHQIGFQRTGV*AVNSSITIPLW Trigger: CCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGACTCCTGTTCTCTGGAACCCTATCTGGTGGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | AGCTCACTCACCAAGCCGCACTGGGTGGATCCATCTTaGGTTTGTTGGAGAGAACAGACTCTACCTTTATGG | + |
Preference number: 4 (lower is better) Translates to: SSLTKPHWVDPS*VCWREQTLPLW Trigger: CCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR TCA 90 bp | CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATAAGATGGGGGAGTCAGTaGTGGATTCTGTGGGGATGG | + |
Preference number: 4 (lower is better) Translates to: PFIPFIQSVVVGSTTHQIRWGSQ*WILWGW Trigger: CCATCCCCACAGAATCCATCACTGACTCCCCCATCT...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | ATGAGGCAGAGCTACTGTGGTAGCCTTTGGGAGACCTaGGTCCACAGCCACAATAAAATAACAATACAGCCA | + |
Preference number: 4 (lower is better) Translates to: MRQSYCGSLWET*VHSHNKITIQP Trigger: TGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCAAAGGCTACCACAGTAGCTCTGCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | TTCAGGATGGATCATATTTCCTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTTTCCCTGATCAGAATC | + |
Preference number: 4 (lower is better) Translates to: FRMDHISFSQKG*ETLWSLSLIRI Trigger: GATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAAGGAAATATGATCCATCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR GCA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACTCTGCAGGTGCTCCTTaGGGCTGTAGGTCTTCTCAC | + |
Preference number: 4 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDSAGAP*GCRSSH Trigger: GTGAGAAGACCTACAGCCGCAAGGAGCACCTGCAGA...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CCA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACAGCAGCTGGCTAGCTTaGGCATCCACCTTCCTCTCT | + |
Preference number: 4 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDSSWLA*ASTFLS Trigger: AGAGAGGAAGGTGGATGCCCAAGCTAGCCAGCTGCT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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3UTR CAA 72 bp | ACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTaGTATATAATTTTAGACATGCCAGTGTGTATAAGA | + |
Preference number: 4 (lower is better) Translates to: TGEFNQPSRLPQ*YIILDMPVCIR Trigger: TCTTATACACACTGGCATGTCTAAAATTATATACAACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | GGCGGCATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAGCTCCAGCTC | + |
Preference number: 5 (lower is better) Translates to: GGIPSAISARSAGSW*QTSSGGRAWAQLQL Trigger: GAGCTGGAGCTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAATGCCGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | ATGGGCGGCATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: MGGIPSAISARSAGS*WQTSSGGRAWAQLQ Trigger: CTGGAGCTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAATGCCGCCCAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCCCAGGCCCGGGCCATaGTGCACGCGCAGGTGGTCC | + |
Preference number: 5 (lower is better) Translates to: STHLPSPPGQSLIPWWLLPRPGP*CTRRWS Trigger: GGACCACCTGCGCGTGCACAATGGCCCGGGCCTGGG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTACCGGAGGGTCTGGCTaGGACACTGGGCCATCTGTG | + |
Preference number: 5 (lower is better) Translates to: CLAMQDAEMETGPPGCGATGGSG*DTGPSV Trigger: CACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGT...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTCAAGCTCCCCTTCCATaGAGTCACGTGGGCCCCATG | + |
Preference number: 5 (lower is better) Translates to: QCLAMQDAEMETGPPGCGQAPLP*SHVGPM Trigger: CATGGGGCCCACGTGACTCAATGGAAGGGGAGCTTG...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS TCA 90 bp | CAGGCTGTCACTGGGCCCAGAGTCCAGTCCAAGCTCCCCTTCCATTaGGTCACGTGGGCCCCATGGGTACGGCTGCTCTTCCTGCTTGAT | + |
Preference number: 5 (lower is better) Translates to: QAVTGPRVQSKLPFH*VTWAPWVRLLFLLD Trigger: ATCAAGCAGGAAGAGCAGCCGTACCCATGGGGCCCACGTGACTCAATGGAAGGGGAGCTTGGACTGGACTCTGGGCCCAGTGACAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | ATGGCAGCCACCACGGTCCAGAGCGAGATCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGGTCAGGAAAGACAGGGGCCCTATCT | + |
Preference number: 5 (lower is better) Translates to: MAATTVQSEISAVGN*GSRIMRSGKTGALS Trigger: AGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGTGGCTGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCTGATGAGGTTGGGTTaGGGGCTGCGCAGAAGATGG | + |
Preference number: 5 (lower is better) Translates to: ETGPPGCGAGSHGVMHQNLMRLG*GLRRRW Trigger: CCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 90 bp | TCCAGAGCGAGATCTCTGCTGTGGGCAACTGGGGCTCACGCATCATaGGGTCAGGAAAGACAGGGGCCCTATCTGGAAAGGGCGGGAACT | + |
Preference number: 5 (lower is better) Translates to: SRARSLLWATGAHAS*GQERQGPYLERAGT Trigger: AGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | GCTCTGCTGATGAGGTTGGGTTTGGGGCTGCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAGGCTGTCACTGGGCCCAGAGTCCAG | + |
Preference number: 5 (lower is better) Translates to: ALLMRLGLGLRRRWG*VLYKQQAVTGPRVQ Trigger: CTGGACTCTGGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCAGCAGCTGGCTAGCTaGGGCATCCACCTTCCTCTC | + |
Preference number: 5 (lower is better) Translates to: STHLPSPPGQSLIPWWLLQQLAS*GIHLPL Trigger: GAGAGGAAGGTGGATGCCCAAGCTAGCCAGCTGCTG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCGCTCTGCTGATGAGGTaGGGTTTGGGGCTGCGCAGA | + |
Preference number: 5 (lower is better) Translates to: STHLPSPPGQSLIPWWLLALLMR*GLGLRR Trigger: TCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGC...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | CACAAGGCTCTTCCCTGGGTTCTGCCTGGACCGGAGGGTCTGGCTTaGACACTGGGCCATCTGTGTCCAGGGACATCAGGGTTTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: HKALPWVLPGPEGLA*TLGHLCPGTSGFCS Trigger: ACTACAAAACCCTGATGTCCCTGGACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | GCGCAGAAGATGGGGGTGGGTTCTTTACAAGCAGCAGGCTGTCACTaGGCCCAGAGTCCAGTCCAAGCTCCCCTTCCATTGAGTCACGTG | + |
Preference number: 5 (lower is better) Translates to: AQKMGVGSLQAAGCH*AQSPVQAPLPLSHV Trigger: CACGTGACTCAATGGAAGGGGAGCTTGGACTGGACTCTGGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | GTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCACACACAAGG | + |
Preference number: 5 (lower is better) Translates to: VLCRHQSLCSCVCSH*DFSLFGVMLLPHTR Trigger: CCTTGTGTGTGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 90 bp | GGAGGATATGTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTaGAGTCACTGGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCA | + |
Preference number: 5 (lower is better) Translates to: GGYVLCRHQSLCSCV*SHWDFSLFGVMLLP Trigger: TGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGACATATCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 90 bp | AACACACAGGGCTTCTTCTCGCTTTACCTGGGAGGATATGTCCTGTaGCGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTGGGAT | + |
Preference number: 5 (lower is better) Translates to: NTQGFFSLYLGGYVL*RHQSLCSCVCSHWD Trigger: ATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGACATATCCTCCCAGGTAAAGCGAGAAGAAGCCCTGTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTATCCATGTCCCATTCTaGAGCCTGCATGGGCGGCAT | + |
Preference number: 5 (lower is better) Translates to: AQVWKSLEAALSTGGFSLIHVPF*SLHGRH Trigger: ATGCCGCCCATGCAGGCTCAAGAATGGGACATGGAT...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGCGCACGCCGAAGGTCTaGCCGCATTCCAGGCAAGAG | + |
Preference number: 5 (lower is better) Translates to: WETLVHSHNKITIQPIAGRTPKV*PHSRQE Trigger: CTCTTGCCTGGAATGCGGCAAGACCTTCGGCGTGCG...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAGGCCAGAGTGGCAGTaGAAGCTCTTCTCGCACTCT | + |
Preference number: 5 (lower is better) Translates to: STRGVGKPFLTQTRVLGHRPEWQ*KLFSHS Trigger: AGAGTGCGAGAAGAGCTTCAACTGCCACTCTGGCCT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 90 bp | GTGGGAATATCTCTCTCTGCCAAATCCTGCTGGTCCCATACACACTaGTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCCTGGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: VGISLSAKSCWSHTH*CSSCLIRDKRSWAE Trigger: CTCTGCCCAGGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGATATTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGTTTCGGATGAAGCTCTaGCCGCAGAGCGCGCACTGG | + |
Preference number: 5 (lower is better) Translates to: WETLVHSHNKITIQPIAGFRMKL*PQSAHW Trigger: CCAGTGCGCGCTCTGCGGCAAGAGCTTCATCCGAAA...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATGGAACTGAAAAGGCATaGGTCTCCTGGCATCCATGT | + |
Preference number: 5 (lower is better) Translates to: STRGVGKPFLTQTRVLGHGTEKA*VSWHPC Trigger: ACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCC...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGGGCTGCTCTTCCTGCTaGATCCAGGACAAAATGTCA | + |
Preference number: 5 (lower is better) Translates to: CGLAALFSCGLAKQLSHLGCSSC*IQDKMS Trigger: TGACATTTTGTCCTGGATCAAGCAGGAAGAGCAGCC...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS-3UTR CAA 90 bp | TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACAAGGTCACCGGGACCTaGGGGGCCTCCCCCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: FPLFKTLHLNRCTHTPQDKVTGT*GASPLL Trigger: CAGCAAGGGGGAGGCCCCCAAGGTCCCGGTGACCTT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 90 bp | TCTGAATTAGGATCTGTGGGAATATCTCTCTCTGCCAAATCCTGCTaGTCCCATACACACTGCTGTTCTTCCTGCTTAATCCGGGACAAA | + |
Preference number: 5 (lower is better) Translates to: SELGSVGISLSAKSC*SHTHCCSSCLIRDK Trigger: TTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGATATTCCCACAGATCCTAATTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | CGCGCCGTGAGCAAGGAGGCTCCGCCGCAGGCCGCCTaGGCAGCAGCTACCGCAGCCACTGCCCGCACCAGC | + |
Preference number: 6 (lower is better) Translates to: RAVSKEAPPQAA*AAATAATARTS Trigger: GCTGGTGCGGGCAGTGGCTGCGGTAGCTGCTGCCCAGGCGGCCTGCGGCGGAGCCTCCTTGCTCACGGCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | CCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAG | + |
Preference number: 6 (lower is better) Translates to: PSAISARSAGSW*QTSSGGRAWAQ Trigger: CTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | ATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGGGGCAGAGCCTGGGCC | + |
Preference number: 6 (lower is better) Translates to: IPSAISARSAGS*WQTSSGGRAWA Trigger: GGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | GCCGCAGGCCGCCTGGGCAGCAGCTACCGCAGCCACTaGCCGCACCAGCACCGGTACTATTGCCACTACCCG | + |
Preference number: 6 (lower is better) Translates to: AAGRLGSSYRSH*PHQHRYYCHYP Trigger: CGGGTAGTGGCAATAGTACCGGTGCTGGTGCGGGCAGTGGCTGCGGTAGCTGCTGCCCAGGCGGCCTGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CAA 72 bp | ACCTGGAGTGGCCGCGGGGCCCCCAGGCCCGGGCCATaGTGCACGCGCAGGTGGTCCTTGAGTGACTCCTTG | + |
Preference number: 6 (lower is better) Translates to: TWSGRGAPRPGP*CTRRWSLSDSL Trigger: CAAGGAGTCACTCAAGGACCACCTGCGCGTGCACAATGGCCCGGGCCTGGGGGCCCCGCGGCCACTCCAGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | AGGTCTTGCCGCATTCCAGGCAAGAGTAGGGCTTGCTaGGCGCGCCGTGAGCAAGGAGGCTCCGCCGCAGGC | + |
Preference number: 6 (lower is better) Translates to: RSCRIPGKSRAC*ARREQGGSAAG Trigger: GCCTGCGGCGGAGCCTCCTTGCTCACGGCGCGCGCAGCAAGCCCTACTCTTGCCTGGAATGCGGCAAGACCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | ATGCTGCTCCCACACACAAGGCTCTTCCCTGGGTTCTaGCTGGACCGGAGGGTCTGGCTTGGACACTGGGCC | + |
Preference number: 6 (lower is better) Translates to: MLLPHTRLFPGF*LDRRVWLGHWA Trigger: GGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTGTGTGGGAGCAGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | CTGAATGGCAGCCACCACGGTCCAGAGCGAGATCTCTaGTGTGGGCAACTGGGGCTCACGCATCATGCGGTC | + |
Preference number: 6 (lower is better) Translates to: LNGSHHGPERDL*CGQLGLTHHAV Trigger: GACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGTGGCTGCCATTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | AGGCTCTTCCCTGGGTTCTGCCTGGACCGGAGGGTCTaGCTTGGACACTGGGCCATCTGTGTCCAGGGACAT | + |
Preference number: 6 (lower is better) Translates to: RLFPGFCLDRRV*LGHWAICVQGH Trigger: ATGTCCCTGGACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | ACCACGGTCCAGAGCGAGATCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGGTCAGGAAAGACAGGG | + |
Preference number: 6 (lower is better) Translates to: TTVQSEISAVGN*GSRIMRSGKTG Trigger: CCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CAA 72 bp | AGCCAAGGCGGGCAGGCTCTGCTGATGAGGTTGGGTTaGGGGCTGCGCAGAAGATGGGGGTGGGTTCTTTAC | + |
Preference number: 6 (lower is better) Translates to: SQGGQALLMRLG*GLRRRWGWVLY Trigger: GTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGCCTGCCCGCCTTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | ATGAGGTTGGGTTTGGGGCTGCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAGGCTGTCACTGGGCCC | + |
Preference number: 6 (lower is better) Translates to: MRLGLGLRRRWG*VLYKQQAVTGP Trigger: GGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | TGGCCCCGAACACACAGGGCTTCTTCTCGCTTTACCTaGGAGGATATGTCCTGTGCCGGCACCAGAGTCTCT | + |
Preference number: 6 (lower is better) Translates to: WPRTHRASSRFT*EDMSCAGTRVS Trigger: AGAGACTCTGGTGCCGGCACAGGACATATCCTCCCAGGTAAAGCGAGAAGAAGCCCTGTGTGTTCGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | GTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTaGAGTCACTGGGATTTCTCTCTCTTCGGGGTGATG | + |
Preference number: 6 (lower is better) Translates to: VLCRHQSLCSCV*SHWDFSLFGVM Trigger: CATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | CGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCA | + |
Preference number: 6 (lower is better) Translates to: RHQSLCSCVCSH*DFSLFGVMLLP Trigger: TGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | CTGCTGATGAGGTTGGGTTTGGGGCTGCGCAGAAGATaGGGGTGGGTTCTTTACAAGCAGCAGGCTGTCACT | + |
Preference number: 6 (lower is better) Translates to: LLMRLGLGLRRR*GWVLYKQQAVT Trigger: AGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS TCA 72 bp | GGAAAGACAGGGGCCCTATCTGGAAAGGGCGGGAACTaGAAAGGCATTGGTCTCCTGGCATCCATGTCCCAT | + |
Preference number: 6 (lower is better) Translates to: GKTGALSGKGGN*KGIGLLASMSH Trigger: ATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | GGCCCTATCTGGAAAGGGCGGGAACTGAAAAGGCATTaGTCTCCTGGCATCCATGTCCCATTCTTGAGCCTG | + |
Preference number: 6 (lower is better) Translates to: GPIWKGRELKRH*SPGIHVPFLSL Trigger: CAGGCTCAAGAATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | ACGCATCATGCGGTCAGGAAAGACAGGGGCCCTATCTaGAAAGGGCGGGAACTGAAAAGGCATTGGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: THHAVRKDRGPI*KGRELKRHWSP Trigger: AGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CAA 72 bp | GGGCCCTATCTGGAAAGGGCGGGAACTGAAAAGGCATaGGTCTCCTGGCATCCATGTCCCATTCTTGAGCCT | + |
Preference number: 6 (lower is better) Translates to: GPYLERAGTEKA*VSWHPCPILEP Trigger: AGGCTCAAGAATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS CCA 72 bp | TGCTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCCTaGGCAGAGATGGGGGAGTCAGTGATGGATTCTGTG | + |
Preference number: 6 (lower is better) Translates to: CCSSCLIRDKRS*AEMGESVMDSV Trigger: CACAGAATCCATCACTGACTCCCCCATCTCTGCCCAGGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |
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CDS GCA 72 bp | TCTCTCTCTGCCAAATCCTGCTGGTCCCATACACACTaGTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCC | + |
Preference number: 6 (lower is better) Translates to: SLSAKSCWSHTH*CSSCLIRDKRS Trigger: GGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061890.8 |