RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP282 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025821

Ensembl transcript IDs: ENSMUST00000061890.8

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGGCAGAGGTAGGCAGTGTGTGCGGTGGGGACACTGCACTGGGCTaGAGCCCTGGTGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTG +
Preference number: 1 (lower is better)
Translates to: PAEVGSVCGGDTALG*SPGAAWPHCSHVVL
Trigger: CAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 90 bp CCAGTGGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTaGCTTGCTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACC +
Preference number: 1 (lower is better)
Translates to: PVASGVSEVCPNDSC*LAVPLGPSLATGST
Trigger: GGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 90 bp GGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTGCCTTaGTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTATG +
Preference number: 1 (lower is better)
Translates to: GQWCVRGVSQRFLLP*CPSGTFPGHWVHPM
Trigger: CATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 90 bp GTACTGGGGTACCCAGGTCCACCCCTTGGAATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTCCAGCAGGAGGTGAGGAGAGGGCGG +
Preference number: 1 (lower is better)
Translates to: VLGYPGPPLGIPCLE*NSCADFQQEVRRGR
Trigger: CCGCCCTCTCCTCACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGTACCCCAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTaGCTACTCTGGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: STHLPSPPGQSLIPW*LLWQPVFPHPVPWE
Trigger: TTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 90 bp TGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTATGAGATaGGCTGGACTGTCCACTAGAGTTGGACAGTACTGGGGTACCCAG +
Preference number: 1 (lower is better)
Translates to: CPSGTFPGHWVHPMR*AGLSTRVGQYWGTQ
Trigger: CTGGGTACCCCAGTACTGTCCAACTCTAGTGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTaGGGTGCTGGGAGCCATGGAGTGATGCACCAAAATGAAAGGGAG +
Preference number: 1 (lower is better)
Translates to: CLAMQDAEMETGPPG*GAGSHGVMHQNERE
Trigger: CTCCCTTTCATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 90 bp GCAGATGAGCAGGACAGAAGCAGAGCGCTCACAAACGTGGTGCCATaGAATGCTGGCCACCCACCACGCTCCCTAGCTGGGAGAGAAACA +
Preference number: 1 (lower is better)
Translates to: ADEQDRSRALTNVVP*NAGHPPRSLAGRET
Trigger: TGTTTCTCTCCCAGCTAGGGAGCGTGGTGGGTGGCCAGCATTTCATGGCACCACGTTTGTGAGCGCTCTGCTTCTGTCCTGCTCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 90 bp TTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAAACTGGAGTA +
Preference number: 1 (lower is better)
Translates to: LPSPPGQSLIPWWLL*QPVFPHPVPWETGV
Trigger: TACTCCAGTTTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 90 bp GAGGCTGCTCATATTACCTGTGGAAGGAGGGTGAAGGGTCACAGCTaGCCTCACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTT +
Preference number: 1 (lower is better)
Translates to: EAAHITCGRRVKGHS*PHRRIQSALPPAPV
Trigger: AACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATGAGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 90 bp CACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTaGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATTCCATTC +
Preference number: 1 (lower is better)
Translates to: HTWGWRDAFLQKTWI*FLAPTLGRGPFIPF
Trigger: GAATGGAATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 90 bp TACACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTaGATTTGGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATT +
Preference number: 1 (lower is better)
Translates to: YTHTWGWRDAFLQKT*IWFLAPTLGRGPFI
Trigger: AATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 90 bp TTGTATATAATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAACTaGCTGGGGGCAGAGCACACCCGTGGTGTCTTGCCTGTGTTGCCT +
Preference number: 1 (lower is better)
Translates to: LYIILDMPVCIRGRN*LGAEHTRGVLPVLP
Trigger: AGGCAACACAGGCAAGACACCACGGGTGTGCTCTGCCCCCAGTCAGTTTCTACCTCTTATACACACTGGCATGTCTAAAATTATATACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 90 bp ATAATAATTCATTTTCCTAAGATTAGTCTCTTTCAAAATGCTGAGTaGAGGAGCAAAGAAAGAAATCCCAGTTCCATGGGTCGCAGTTCA +
Preference number: 1 (lower is better)
Translates to: IIIHFPKISLFQNAE*RSKERNPSSMGRSS
Trigger: TGAACTGCGACCCATGGAACTGGGATTTCTTTCTTTGCTCCTTCACTCAGCATTTTGAAAGAGACTAATCTTAGGAAAATGAATTATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGAGAGGGCGGGGAGGTaGGCTGAGAACGGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: CLAMQDAEMETGPPGCGAERAGR*AENGGA
Trigger: TGCCCCACCGTTCTCAGCGCACCTCCCCGCCCTCTC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp TGGCCAGTGGTGTGTCCGAGGTGTGTCCCAACGATTCCTGCTGCCTaGCTGTCCCTCTGGGACCTTCCCTGGCCACTGGGTCCACCCTAT +
Preference number: 2 (lower is better)
Translates to: WPVVCPRCVPTIPAA*LSLWDLPWPLGPPY
Trigger: ATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGGACACACCTCGGACACACCACTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCGGGCTGGAGCCCTGGTaGGGCTTGGCCGCACTGTTC +
Preference number: 2 (lower is better)
Translates to: APAGSEHSRSVSMSVSTIGLEPW*GLAALF
Trigger: GAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCC...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCCCAACGATTCCTGCTaGCTTGCTGTCCCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNPNDSC*LAVPLG
Trigger: TCCCAGAGGGACAGCAAGGCAGCAGGAATCGTTGGG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCCCAGGTCCACCCCTTaGAATACCCTGTCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: CLAMQDAEMETGPPGCGAPRSTP*NTLSGV
Trigger: CACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTACCCAGAAAACCAGTTaGCTCTGGAGGGCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: CLAMQDAEMETGPPGCGATQKTS*LWRAWL
Trigger: AAGCCAGGCCCTCCAGAGGCAACTGGTTTTCTGGGT...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGGAGTGCAATTCCTGTaGCGATTTCCAGCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: CLAMQDAEMETGPPGCGAGVQFL*RFPAGG
Trigger: ACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATAGTTACCCCAGGAGTTaGCCCCTGTTGCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNSYPRS*PLLLLR
Trigger: TCTCAGAAGCAACAGGGGCCAACTCCTGGGGTAACT...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTAGTAAACCATCAGGGTaGGGTCTGACCCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: QCLAMQDAEMETGPPGCGSKPSG*GLTQKT
Trigger: GGTTTTCTGGGTCAGACCTCACCCTGATGGTTTACT...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGGCGGGGAGGTGCGCTaGGAACGGTGGGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: WETLVHSHNKITIQPIAGGGEVR*ERWGRR
Trigger: TCTCCTGCCCCACCGTTCTCAGCGCACCTCCCCGCC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGTCTGGTCGCTTTCCCTaGTCAGAATCTGTAACCCCA +
Preference number: 2 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWSGRFP*SESVTP
Trigger: TGGGGTTACAGATTCTGATCAGGGAAAGCGACCAGA...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGCAGAGCAGCGCAGATaGGCAGGACAGAAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLAEQRR*AGQKQS
Trigger: GCTCTGCTTCTGTCCTGCTCATCTGCGCTGCTCTGC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTC +
Preference number: 2 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWIPCLE*NSCADF
Trigger: GAAATCGGCACAGGAATTGCACTCCAGACAGGGTAT...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGAGGTAGGCAGTGTGTaGGGTGGGGACACTGCACTG +
Preference number: 2 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAAEVGSV*GGDTAL
Trigger: CAGTGCAGTGTCCCCACCGCACACACTGCCTACCTC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTCTCTGGGACCTTCCCTaGCCACTGGGTCCACCCTAT +
Preference number: 2 (lower is better)
Translates to: PSHAKPRHFTAHQVPIPSLWDLP*PLGPPY
Trigger: ATAGGGTGGACCCAGTGGCCAGGGAAGGTCCCAGAG...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGCGATTCCTGCTGCCTTaGTGTCCCTCTGGGACCTTC +
Preference number: 2 (lower is better)
Translates to: CGLAALFSCGLAKQLSHLRFLLP*CPSGTF
Trigger: GAAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCG...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCTCCACACCGCAGATTTaGTCTCCTTTTCAGGATGTC +
Preference number: 2 (lower is better)
Translates to: APAGSEHSRSVSMSVSTISTPQI*SPFQDV
Trigger: GACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGA...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGCCTTGCTGTCCCTCTaGGACCTTCCCTGGCCACTG +
Preference number: 2 (lower is better)
Translates to: WETLVHSHNKITIQPIAGALLSL*DLPWPL
Trigger: CAGTGGCCAGGGAAGGTCCCAGAGGGACAGCAAGGC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHPWWLL*QPVFPH
Trigger: GTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTACCACGCTCCCTAGCTaGGAGAGAAACAGGATCCAC +
Preference number: 2 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAATTLPS*ERNRIH
Trigger: GTGGATCCTGTTTCTCTCCCAGCTAGGGAGCGTGGT...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCCCAGTGCCTGGCCATaGAAGATGCTGAAATGGAGA +
Preference number: 2 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHPSAWP*KMLKWR
Trigger: TCTCCATTTCAGCATCTTGCATGGCCAGGCACTGGG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATGGGTTGGAGACTCTCTaGTCGCTTTCCCTGATCAGA +
Preference number: 2 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHGLETL*SLSLIR
Trigger: TCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCC...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp GAGGATGTTACCCTTAGCGCTTCCCTCAGCTTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGTCTCCTCACCTTCAGGATGGATCAT +
Preference number: 2 (lower is better)
Translates to: EDVTLSASLSFHTAD*LSFSGCLLTFRMDH
Trigger: ATGATCCATCCTGAAGGTGAGGAGACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAAGCTGAGGGAAGCGCTAAGGGTAACATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp GTGGGTAGTACAACCCACCAGATAGGGTTCCAGAGAACAGGAGTCTaGGCTGTCAATAGCTCCATCACCATACCTCTTTGGGAATCAGCT +
Preference number: 2 (lower is better)
Translates to: VGSTTHQIGFQRTGV*AVNSSITIPLWESA
Trigger: AGCTGATTCCCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGACTCCTGTTCTCTGGAACCCTATCTGGTGGGTTGTACTACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp ACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTaGGTTCTTAGCACCCACATTAGGAAGGGGCCCATTCATTCCATT +
Preference number: 2 (lower is better)
Translates to: THLGLERCVLTEDLD*VLSTHIRKGPIHSI
Trigger: AATGGAATGAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp TTGTTGGAGAGAACAGACTCTACCTTTATGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTGCTCTGTACCA +
Preference number: 2 (lower is better)
Translates to: LLERTDSTFMAPQHP*SLSTLEQCGLCSVP
Trigger: TGGTACAGAGCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp ACAACTATCTCACCTGTGTCTCACTCTCCTCAGTTACCACATCAGGAAAACCCTACTGGGTCCACCCTATaGGATGAGCTGGACTGTCCA +
Preference number: 2 (lower is better)
Translates to: TTISPVSHSPQLPHQENPTGSTL*DELDCP
Trigger: TGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGT...AGGGTTTTCCTGATGTGGTAACTGAGGAGAGTGAGACACAGGTGAGATAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATTTTCTCAGAAGGGGTTaGAGACTCTCTGGTCGCTTT +
Preference number: 2 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHFLRRG*RLSGRF
Trigger: AAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAA...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp CTCCTCACCTTCAGGATGGATCATATTTCCTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTTTCCCTGATCAGAATCTGTAACCCC +
Preference number: 2 (lower is better)
Translates to: LLTFRMDHISFSQKG*ETLWSLSLIRICNP
Trigger: GGGGTTACAGATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAAGGAAATATGATCCATCCTGAAGGTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATACTTGCCCAGCCCTCCTaGACAGAGTCTCATTCCTTG +
Preference number: 2 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQILAQPS*TESHSL
Trigger: CAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAG...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 90 bp GCTGACCTCACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTaGTATATAATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: ADLTGEFNQPSRLPQ*YIILDMPVCIRGRN
Trigger: GTTTCTACCTCTTATACACACTGGCATGTCTAAAATTATATACAACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACACCAGAAAGGCCAGGTaGGATCGGTCTGAGACCGGC +
Preference number: 2 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDTRKAR*DRSETG
Trigger: GCCGGTCTCAGACCGATCTCACCTGGCCTTTCTGGT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGCACCTGACTGAATaGTCAGAATTGAGAAATACA +
Preference number: 2 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAALHLTE*SELRNT
Trigger: TGTATTTCTCAATTCTGATCATTCAGTCAGGTGCAG...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGGAATACCCTGTCTaGAGTGCAATTCCTGTGCCG +
Preference number: 2 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQILEYPV*SAIPVP
Trigger: CGGCACAGGAATTGCACTCCAGACAGGGTATTCCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATTCCTCACCTTCAGGATaGATCATATTTCCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHSSPSG*IIFPFL
Trigger: GAGAAAAGGAAATATGATCCATCCTGAAGGTGAGGA...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGCTGAATGATCAGAATTaGGAAATACAGGTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: MLHSKKSNQLSGTNSTGLLNDQN*EIQVGD
Trigger: GTCCCCAACCTGTATTTCTCAATTCTGATCATTCAG...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR TCA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACTGGGAAAGCCGTTTTTaGCACAAACAAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDWESRF*HKQGSW
Trigger: CCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCA...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR GCA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACCCAGCTTTGGGAACATaGAATCTGCAATCTGGATAC +
Preference number: 2 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDPALGT*NLQSGY
Trigger: GTATCCAGATTGCAGATTGCATGTTCCCAAAGCTGG...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 72 bp ACCGGCAGAGGTAGGCAGTGTGTGCGGTGGGGACACTaGACTGGGCTGGAGCCCTGGTGCGGCTTGGCCGCA +
Preference number: 3 (lower is better)
Translates to: TGRGRQCVRWGH*TGLEPWCGLAA
Trigger: TGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp CGGTCTGAGACCGGCAGAGGTAGGCAGTGTGTGCGGTaGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGC +
Preference number: 3 (lower is better)
Translates to: RSETGRGRQCVR*GHCTGLEPWCG
Trigger: GCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTACCTCTGCCGGTCTCAGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GTAGGCAGTGTGTGCGGTGGGGACACTGCACTGGGCTaGAGCCCTGGTGCGGCTTGGCCGCACTGTTCTCAT +
Preference number: 3 (lower is better)
Translates to: VGSVCGGDTALG*SPGAAWPHCSH
Trigger: ATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCACCGCACACACTGCCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGAGCCCTGGTGCGGCTaGGCCGCACTGTTCTCATGT +
Preference number: 3 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWEPWCG*AALFSC
Trigger: ACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGCTTaGCCGCACTGTTCTCATGTGGTCTTGCTAAACAAC +
Preference number: 3 (lower is better)
Translates to: GDTALGWSPGAA*PHCSHVVLLNN
Trigger: GTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCGACCCAGAAAACCAGTaGCCTCTGGAGGGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLDPENQ*PLEGLA
Trigger: AGCCAGGCCCTCCAGAGGCAACTGGTTTTCTGGGTC...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp CTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATaGAAGGGAGTCCTTTGGGCGCTTCCCAAGGCGCCT +
Preference number: 3 (lower is better)
Translates to: LRCWEPWSDAPK*KGVLWALPKAP
Trigger: AGGCGCCTTGGGAAGCGCCCAAAGGACTCCCTTTCATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCACCCAGGTCCACCCCTaGGAATACCCTGTCTGGAGT +
Preference number: 3 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLTQVHP*EYPVWS
Trigger: ACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGT...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATATTGAGAAATACAGGTaGGGGACCAGGATGCTAGGG +
Preference number: 3 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNIEKYR*GTRMLG
Trigger: CCCTAGCATCCTGGTCCCCAACCTGTATTTCTCAAT...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGGCTCTAGCACCCACTaGCCCAGCCCTCCTGGACAG +
Preference number: 3 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAAGSSTH*PSPPGQ
Trigger: CTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp GGGACCTTCCCTGGCCACTGGGTCCACCCTATGAGATaGGCTGGACTGTCCACTAGAGTTGGACAGTACTGG +
Preference number: 3 (lower is better)
Translates to: GTFPGHWVHPMR*AGLSTRVGQYW
Trigger: CCAGTACTGTCCAACTCTAGTGGACAGTCCAGCTCATCTCATAGGGTGGACCCAGTGGCCAGGGAAGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp CCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTaGCAGCCAGTCTTTCCTCACCCTGTGCCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: PPGQSLIPWWLL*QPVFPHPVPWE
Trigger: TTCCCAGGGCACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp TTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTaGCTACTCTGGCAGCCAGTCTTTCCTCACCCTGTG +
Preference number: 3 (lower is better)
Translates to: LPSPPGQSLIPW*LLWQPVFPHPV
Trigger: CACAGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp CACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTaGTGGCTACTCTGGCAGCCAGTCTTTCCTCACCCT +
Preference number: 3 (lower is better)
Translates to: HLPSPPGQSLIP*WLLWQPVFPHP
Trigger: AGGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 72 bp TACCCAGGTCCACCCCTTGGAATACCCTGTCTGGAGTaGAATTCCTGTGCCGATTTCCAGCAGGAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: YPGPPLGIPCLE*NSCADFQQEVR
Trigger: CCTCACCTCCTGCTGGAAATCGGCACAGGAATTGCACTCCAGACAGGGTATTCCAAGGGGTGGACCTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GCCATGAAATGCTGGCCACCCACCACGCTCCCTAGCTaGGAGAGAAACAGGATCCACAAGAGGAGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: AMKCWPPTTLPS*ERNRIHKRSGK
Trigger: TTTCCCACTCCTCTTGTGGATCCTGTTTCTCTCCCAGCTAGGGAGCGTGGTGGGTGGCCAGCATTTCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTATGAAAGGGAGTCCTTaGGGCGCTTCCCAAGGCGCC +
Preference number: 3 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLMKGSP*GASQGA
Trigger: GGCGCCTTGGGAAGCGCCCAAAGGACTCCCTTTCAT...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp CTCAGAAGGGGTTGGAGACTCTCTGGTCGCTTTCCCTaGTCAGAATCTGTAACCCCAGTGGCCAGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: LRRGWRLSGRFP*SESVTPVASGV
Trigger: CACACCACTGGCCACTGGGGTTACAGATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTACGATTCCTGCTGCCTaGCTGTCCCTCTGGGACCTT +
Preference number: 3 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAATIPAA*LSLWDL
Trigger: AAGGTCCCAGAGGGACAGCAAGGCAGCAGGAATCGT...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp CATATTACCTGTGGAAGGAGGGTGAAGGGTCACAGCTaGCCTCACAGGAGAATTCAATCAGCCCTCCCGCCT +
Preference number: 3 (lower is better)
Translates to: HITCGRRVKGHS*PHRRIQSALPP
Trigger: AGGCGGGAGGGCTGATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp GCACCGAGGCTGCTCATATTACCTGTGGAAGGAGGGTaGAGGGTCACAGCTGACCTCACAGGAGAATTCAAT +
Preference number: 3 (lower is better)
Translates to: APRLLILPVEGG*RVTADLTGEFN
Trigger: ATTGAATTCTCCTGTGAGGTCAGCTGTGACCCTTCACCCTCCTTCCACAGGTAATATGAGCAGCCTCGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp ACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTaGATTTGGTTCTTAGCACCCACATTAGGAAGGGGC +
Preference number: 3 (lower is better)
Translates to: TWGWRDAFLQKT*IWFLAPTLGRG
Trigger: GCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp AGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTaGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SQTSCLGQIAQV*KSLEAALSTGG
Trigger: ACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp ACCAAGCCGCACTGGGTGGATCCATCTTTGGTTTGTTaGAGAGAACAGACTCTACCTTTATGGCTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: TKPHWVDPSLVC*REQTLPLWLPS
Trigger: GCTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 72 bp CCCTTGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTaGTCTGTACCAGGAGTGTGTAGTAGCAGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: PLSLSTLEQCGL*SVPGVCSSSAE
Trigger: CTCTGCACTGCTACTACACACTCCTGGTACAGAGCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTaGTTCTTAGCACCCACATTAGGAAGGGGCCCATTC +
Preference number: 3 (lower is better)
Translates to: GWRDAFLQKTWI*FLAPTLGRGPF
Trigger: GAATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp CAAGACAGACAGACATCACACACATACACACACACCTaGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGG +
Preference number: 3 (lower is better)
Translates to: QDRQTSHTYTHT*GWRDAFLQKTW
Trigger: CCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGATGTCTGTCTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GCTCACTCACCAAGCCGCACTGGGTGGATCCATCTTTaGTTTGTTGGAGAGAACAGACTCTACCTTTATGGC +
Preference number: 3 (lower is better)
Translates to: AHSPSRTGWIHL*FVGENRLYLYG
Trigger: GCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGAGGAGTTGGCCCCTGTaGCTTCTGAGAGGATTTGGG +
Preference number: 3 (lower is better)
Translates to: MLHSKKSNQLSGTNSTGLRSWPL*LLRGFG
Trigger: CCCAAATCCTCTCAGAAGCAACAGGGGCCAACTCCT...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAG +
Preference number: 3 (lower is better)
Translates to: WETLVHSHNKITIQPIAGAPQHP*SLSTLE
Trigger: CTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp ATTTTAGACATGCCAGTGTGTATAAGAGGTAGAAACTaGCTGGGGGCAGAGCACACCCGTGGTGTCTTGCCT +
Preference number: 3 (lower is better)
Translates to: ILDMPVCIRGRN*LGAEHTRGVLP
Trigger: AGGCAAGACACCACGGGTGTGCTCTGCCCCCAGTCAGTTTCTACCTCTTATACACACTGGCATGTCTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp AACCATGAGGACTCAGGCCCTGAGCTTGACATTCTCTaGGCTGATCAGTGTCACATAGCAGTTCTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: NHEDSGPELDIL*ADQCHIAVLRG
Trigger: TCCTCTGAGAACTGCTATGTGACACTGATCAGCTCAGAGAATGTCAAGCTCAGGGCCTGAGTCCTCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp AGACAGACATCACACACATACACACACACCTGGGGCTaGAGAGATGCGTTCTTACAGAAGACCTGGATTTGG +
Preference number: 3 (lower is better)
Translates to: RQTSHTYTHTWG*RDAFLQKTWIW
Trigger: CCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGATGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR TCA 72 bp TTGTGCAGTGAGAAGCTGCTGCTGCACCTGACTGAATaGTCAGAATTGAGAAATACAGGTTGGGGACCAGGA +
Preference number: 3 (lower is better)
Translates to: LCSEKLLLHLTE*SELRNTGWGPG
Trigger: TCCTGGTCCCCAACCTGTATTTCTCAATTCTGATCATTCAGTCAGGTGCAGCAGCAGCTTCTCACTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 72 bp ATCACACACATACACACACACCTGGGGCTGGAGAGATaGGTTCTTACAGAAGACCTGGATTTGGTTCTTAGC +
Preference number: 3 (lower is better)
Translates to: ITHIHTHLGLER*VLTEDLDLVLS
Trigger: GCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGTGTATGTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTT +
Preference number: 3 (lower is better)
Translates to: WETLVHSHNKITIQPIAGFSQKG*ETLWSL
Trigger: AAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAA...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGGTGGGAAAGCCGTTTTaGACACAAACAAGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: WETLVHSHNKITIQPIAGVGKPF*TQTRVL
Trigger: CAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCAC...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CCA 72 bp GTCTTGGCTGTCAATAGCTCCATCACCATACCTCTTTaGGAATCAGCTTCTTGCGGGGCAAAAGAAAGGAAT +
Preference number: 3 (lower is better)
Translates to: VLAVNSSITIPL*ESASCGAKERN
Trigger: ATTCCTTTCTTTTGCCCCGCAAGAAGCTGATTCCCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGT +
Preference number: 3 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQIFHTAD*LSFSGC
Trigger: ACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGGGAATCAGCTTCTaGCGGGGCAAAAGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQILGISF*RGKRKE
Trigger: TTCCTTTCTTTTGCCCCGCAAGAAGCTGATTCCCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR-3UTR CAA 90 bp ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTGTTCTCATGTGGTCTaGCTAAACAACTATCTCACC +
Preference number: 3 (lower is better)
Translates to: MLHSKKSNQLSGTNSTGLCSHVV*LNNYLT
Trigger: GGTGAGATAGTTGTTTAGCAAGACCACATGAGAACA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR GCA 72 bp TTATTTCCACTATTTAAGACTTTACATTTAAACAGGTaGACACATACACCCCAAGACAGACAGACATCACAC +
Preference number: 3 (lower is better)
Translates to: LFPLFKTLHLNR*THTPQDRQTSH
Trigger: GTGTGATGTCTGTCTGTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGCCGCTCACCGCGGTaGGTCATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWGRSPR*VIWWRM
Trigger: CATCCGCCACCAGATGACGCACCGCGGTGAGCGGCC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: APAGSEHSRSVSMSVSTISAGSW*QTSSGG
Trigger: GCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCT...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCTCTTCCCTGGGTTCTaGCTGGACCGGAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CLAMQDAEMETGPPGCGALFPGF*LDRRVW
Trigger: CCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCCGCGGTGCGTCATCTaGTGGCGGATGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWPRCVI*WRMRPE
Trigger: CTCTGGCCTCATCCGCCACCAGATGACGCACCGCGG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGTTGGGTTTGGGGCTaGGCAGAAGATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWGWVWG*AEDGGG
Trigger: CCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTCACAAGGCTCTTCCCTaGGTTCTGCCTGGACCGGAG +
Preference number: 4 (lower is better)
Translates to: QCLAMQDAEMETGPPGCGHKALP*VLPGPE
Trigger: CTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTG...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATGCAGCAGGCTGTCACTaGGCCCAGAGTCCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNAAGCH*AQSPVQ
Trigger: TTGGACTGGACTCTGGGCCCAGTGACAGCCTGCTGC...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCGGTGCGTCATCTGGTaGCGGATGAGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWRCVIW*RMRPEW
Trigger: CCACTCTGGCCTCATCCGCCACCAGATGACGCACCG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGGTTCTGCTTTCGGATaGAGCTCTTGCCGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: CLAMQDAEMETGPPGCGAGSAFG*SSCRRA
Trigger: CGCTCTGCGGCAAGAGCTTCATCCGAAAGCAGAACC...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTCCCCATGGGTACGGCTaGTCTTCCTGCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: CLAMQDAEMETGPPGCGAPHGYG*SSCLIQ
Trigger: CTGGATCAAGCAGGAAGAGCAGCCGTACCCATGGGG...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGGGCCAGAGTGGCAGTTaGAGCTCTTCTCGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWGQSGS*SSSRTL
Trigger: CAGAGTGCGAGAAGAGCTTCAACTGCCACTCTGGCC...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCCAGAGCGAGATCTCTaGTGTGGGCAACTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLPERDL*CGQLGL
Trigger: GAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATTCTCTGCTGTGCCTGTaGGTCCCTCCAAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNSLLCL*VPPSSA
Trigger: TGCTGAACTTGGAGGGACGCACAGGCACAGCAGAGA...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTTCTTCTCTGCTGTaGCTGTGCGTCCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QCLAMQDAEMETGPPGCGASSLL*LCVPPS
Trigger: ACTTGGAGGGACGCACAGGCACAGCAGAGAAGAAGC...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp ACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTGGTTCCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: THTWGWRDAFLQKTWIWFRSAGS*WQTSSG
Trigger: CCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACG...GAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGG +
Preference number: 4 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLSAVGN*GSRIMR
Trigger: CCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGA...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp TGGGGACACTGCACTGGGCTGGAGCCCTGGTGCGGCTaGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAA +
Preference number: 4 (lower is better)
Translates to: WGHCTGLEPWCG*AALFSCGLAKQ
Trigger: TTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCACCAGGGCTCCAGCCCAGTGCAGTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp CCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTaGGTGGCTACTCTGGCAGCCAGTCTTTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PLAQPSWTESHS*VATLAASLSSP
Trigger: GGGTGAGGAAAGACTGGCTGCCAGAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAGGTCACCGGGACCTTaGGGGCCTCCCCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHRSPGP*GPPPCC
Trigger: GCAGCAAGGGGGAGGCCCCCAAGGTCCCGGTGACCT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCCCGGAGGGTCTGGCTTaGACACTGGGCCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: APAGSEHSRSVSMSVSTIPEGLA*TLGHLC
Trigger: ACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGG...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCGTATGGTCGTTCCTTaGTGTGGCTGCGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNRMVVP*CGCGDE
Trigger: TTCATCACCGCAGCCACACCAAGGAACGACCATACG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GGCTCTAGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTCTGCGCACTCGTATaGTCGTTCCTTGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GSSTHLPSPPGQSLIPWWLCALV*SFLGVA
Trigger: AGCCACACCAAGGAACGACCATACGAGTGCGCAGAG...CCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCTAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGGCCCCAAACCCTGGATaGCCAGCTGCTGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: CGLAALFSCGLAKQLSHLAPNPG*PAAEAA
Trigger: CGCAGCCTCAGCAGCTGGGCATCCAGGGTTTGGGGC...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGAGGCCCGGGCCATTGTaGACGCGCAGGTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: CGLAALFSCGLAKQLSHLRPGPL*TRRWSL
Trigger: CAAGGACCACCTGCGCGTGCACAATGGCCCGGGCCT...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp GCGCCTGCAGGGTCAGAGCATAGTAGGTCTGTGTCCATGTCCGTGAGCACAATCGGAAAGGGCGGGAACTaGAAAGGCATTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: APAGSEHSRSVSMSVSTIGKGGN*KGIGLL
Trigger: CAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCC...GATTGTGCTCACGGACATGGACACAGACCTACTATGCTCTGACCCTGCAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTGCTCTTCCTGCTTaGTCCAGGACAAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: QCLAMQDAEMETGPPGCGAALPA*SRTKCH
Trigger: ATGACATTTTGTCCTGGATCAAGCAGGAAGAGCAGC...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATATTGCTGCGCGCGCCGTaGGCAAGGAGGCTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQILLRAP*ARRLRR
Trigger: GCGGCGGAGCCTCCTTGCTCACGGCGCGCGCAGCAA...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGGCAAGAGTAGGGCTTaGTGCGCGCGCCGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAAGKSRA*CARREQ
Trigger: TTGCTCACGGCGCGCGCAGCAAGCCCTACTCTTGCC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLRRRWG*VLYKQQ
Trigger: CTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp ACAACTATCTCACCTGTGTCTCACTCTCCTCAGTTACCACATCAGGAAAACCCTCTTTCTGGTGGCACCTaGAGTGGCCGCGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TTISPVSHSPQLPHQENPLSGGT*SGRGAP
Trigger: GGGGGCCCCGCGGCCACTCCAGGTGCCACCAGAAAG...AGGGTTTTCCTGATGTGGTAACTGAGGAGAGTGAGACACAGGTGAGATAGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATTGCTTTAGCAGGTTCTaGTTTCGGATGAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNCFSRF*FRMKLL
Trigger: CAAGAGCTTCATCCGAAAGCAGAACCTGCTAAAGCA...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTGCGAGATCTCTGCTGTaGGCAACTGGGGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAAARSLL*ATGAHA
Trigger: TGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGC...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTATTCTTGAGCCTGCATaGGCGGCATTCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSHAKPRHFTAHQVPIPSILEPA*AAFPRP
Trigger: TGGCCGAGGGAATGCCGCCCATGCAGGCTCAAGAAT...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp CAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGGAAGAGCCTAGAAGCAGCTTGGATTCTGTGGGGATaGCTCTGTCTTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QTSCLGQIAQVWKSLEAAWILWG*LCLPGP
Trigger: GGGGCCTGGAAGACAGAGCCATCCCCACAGAATCCA...AGCTGCTTCTAGGCTCTTCCAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp ACCCTTAGCGCTTCCCTCAGCTTCCACACCGCAGATTaGCTCTCCTTTTCAGGATGTCTCCTCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLSASLSFHTAD*LSFSGCLLTFR
Trigger: CCTGAAGGTGAGGAGACATCCTGAAAAGGAGAGCAAATCTGCGGTGTGGAAGCTGAGGGAAGCGCTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTTCCATGTCCCATTCTTaGGCCTGCATGGGCGGCATT +
Preference number: 4 (lower is better)
Translates to: PSHAKPRHFTAHQVPIPSSMSHS*ACMGGI
Trigger: AATGCCGCCCATGCAGGCTCAAGAATGGGACATGGA...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGACAGGGGCCCTATCTaGAAAGGGCGGGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLDRGPI*KGRELK
Trigger: TTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTCTTCCAGGCCCCTCTaGCCCCGAACACACAGGGCT +
Preference number: 4 (lower is better)
Translates to: MLHSKKSNQLSGTNSTGLSSRPL*PRTHRA
Trigger: AGCCCTGTGTGTTCGGGGCCAGAGGGGCCTGGAAGA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp ACACACACCTGGGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTTGGTTCTTGTGCACGCGCAGGTaGTCCTTGAGTGACTCCTTG +
Preference number: 4 (lower is better)
Translates to: THTWGWRDAFLQKTWIWFLCTRR*SLSDSL
Trigger: CAAGGAGTCACTCAAGGACCACCTGCGCGTGCACAA...GAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCCCAGGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp CACCAAGCCGCACTGGGTGGATCCATCTTTGGTTTGTaGGAGAGAACAGACTCTACCTTTATGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HQAALGGSIFGL*ERTDSTFMAPQ
Trigger: CTGGGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTCTCTCTGCCAAATCCTaGTGGTCCCATACACACTGC +
Preference number: 4 (lower is better)
Translates to: PSHAKPRHFTAHQVPIPSLSAKS*WSHTHC
Trigger: GCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAG...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATAGGGGCTCACGCATCATaGGGTCAGGAAAGACAGGGG +
Preference number: 4 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQIGAHAS*GQERQG
Trigger: CCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCC...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: CGLAALFSCGLAKQLSHLCVCSH*DFSLFG
Trigger: CCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACA...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTTCTGCCAAATCCTGCTaGTCCCATACACACTGCTGT +
Preference number: 4 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLSAKSC*SHTHCC
Trigger: ACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGA...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp GGGCTGGAGAGATGCGTTCTTACAGAAGACCTGGATTaGGTTCTTAGCACCCACATTAGGAAGGGGCCCATT +
Preference number: 4 (lower is better)
Translates to: GLERCVLTEDLD*VLSTHIRKGPI
Trigger: AATGGGCCCCTTCCTAATGTGGGTGCTAAGAACCAAATCCAGGTCTTCTGTAAGAACGCATCTCTCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp AGAACAGACTCTACCTTTATGGCTCCCCAGCACCCCTaGTCTCTCTCTACTTTAGAGCAGTGTGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RTDSTFMAPQHP*SLSTLEQCGLC
Trigger: GCAAAGGCCACACTGCTCTAAAGTAGAGAGAGACAAGGGGTGCTGGGGAGCCATAAAGGTAGAGTCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp ACTCACCAAGCCGCACTGGGTGGATCCATCTTTGGTTaGTTGGAGAGAACAGACTCTACCTTTATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: THQAALGGSIFG*LERTDSTFMAP
Trigger: GGGAGCCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp ATGCTGCATTCTAAGAAGTCAAACCAGCTGTCTGGGACAAATAGCACAGGTCTGTCTCTCTCTTCGGGGTaGTGCTGCTCCCACACACAA +
Preference number: 4 (lower is better)
Translates to: MLHSKKSNQLSGTNSTGLSLSSG*CCSHTQ
Trigger: TTGTGTGTGGGAGCAGCATCACCCCGAAGAGAGAGA...CAGACCTGTGCTATTTGTCCCAGACAGCTGGTTTGACTTCTTAGAATGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATCACTGCTGTTCTTCCTaGTTAATCCGGGACAAAAGG +
Preference number: 4 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHHCCSS*LIRDKR
Trigger: CCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTG...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp CCTTCCCACGCCAAGCCTAGACATTTTACAGCCCATCAAGTCCCTATTCCCAGTTACGGCTGCTCTTCCTaGTTGATCCAGGACAAAATG +
Preference number: 4 (lower is better)
Translates to: PSHAKPRHFTAHQVPIPSYGCSS*LIQDKM
Trigger: CATTTTGTCCTGGATCAAGCAGGAAGAGCAGCCGTA...ACTGGGAATAGGGACTTGATGGGCTGTAAAATGTCTAGGCTTGGCGTGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAAGGCATTGGTCTCCTaGCATCCATGTCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHKALVS*HPCPIL
Trigger: AAGAATGGGACATGGATGCCAGGAGACCAATGCCTT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTGAACTGAAAAGGCATTaGTCTCCTGGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLELKRH*SPGIHV
Trigger: GACATGGATGCCAGGAGACCAATGCCTTTTCAGTTC...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGCGGATGAGGCCAGAGTaGCAGTTGAAGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: WETLVHSHNKITIQPIAGRMRPE*QLKLFS
Trigger: CGAGAAGAGCTTCAACTGCCACTCTGGCCTCATCCG...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp AAAGAAAGAAATCCCAGTTCCATGGGTCGCAGTTCATaGAGGTCTGCTGTAGGATGTCACACTAGCGGACCC +
Preference number: 4 (lower is better)
Translates to: KERNPSSMGRSS*RSAVGCHTSGP
Trigger: GGGTCCGCTAGTGTGACATCCTACAGCAGACCTCAATGAACTGCGACCCATGGAACTGGGATTTCTTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp ACAACCCACCAGATAGGGTTCCAGAGAACAGGAGTCTaGGCTGTCAATAGCTCCATCACCATACCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TTHQIGFQRTGV*AVNSSITIPLW
Trigger: CCAAAGAGGTATGGTGATGGAGCTATTGACAGCCAAGACTCCTGTTCTCTGGAACCCTATCTGGTGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp AGCTCACTCACCAAGCCGCACTGGGTGGATCCATCTTaGGTTTGTTGGAGAGAACAGACTCTACCTTTATGG +
Preference number: 4 (lower is better)
Translates to: SSLTKPHWVDPS*VCWREQTLPLW
Trigger: CCATAAAGGTAGAGTCTGTTCTCTCCAACAAACCAAAGATGGATCCACCCAGTGCGGCTTGGTGAGTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR TCA 90 bp CCATTCATTCCATTCATTCAGAGTGTAGTGGTGGGTAGTACAACCCACCAGATAAGATGGGGGAGTCAGTaGTGGATTCTGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PFIPFIQSVVVGSTTHQIRWGSQ*WILWGW
Trigger: CCATCCCCACAGAATCCATCACTGACTCCCCCATCT...TATCTGGTGGGTTGTACTACCCACCACTACACTCTGAATGAATGGAATGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp ATGAGGCAGAGCTACTGTGGTAGCCTTTGGGAGACCTaGGTCCACAGCCACAATAAAATAACAATACAGCCA +
Preference number: 4 (lower is better)
Translates to: MRQSYCGSLWET*VHSHNKITIQP
Trigger: TGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCAAAGGCTACCACAGTAGCTCTGCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp TTCAGGATGGATCATATTTCCTTTTCTCAGAAGGGGTaGGAGACTCTCTGGTCGCTTTCCCTGATCAGAATC +
Preference number: 4 (lower is better)
Translates to: FRMDHISFSQKG*ETLWSLSLIRI
Trigger: GATTCTGATCAGGGAAAGCGACCAGAGAGTCTCCAACCCCTTCTGAGAAAAGGAAATATGATCCATCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR GCA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACTCTGCAGGTGCTCCTTaGGGCTGTAGGTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDSAGAP*GCRSSH
Trigger: GTGAGAAGACCTACAGCCGCAAGGAGCACCTGCAGA...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CCA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACAGCAGCTGGCTAGCTTaGGCATCCACCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDSSWLA*ASTFLS
Trigger: AGAGAGGAAGGTGGATGCCCAAGCTAGCCAGCTGCT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
3UTR CAA 72 bp ACAGGAGAATTCAATCAGCCCTCCCGCCTGCCCCAGTaGTATATAATTTTAGACATGCCAGTGTGTATAAGA +
Preference number: 4 (lower is better)
Translates to: TGEFNQPSRLPQ*YIILDMPVCIR
Trigger: TCTTATACACACTGGCATGTCTAAAATTATATACAACTGGGGCAGGCGGGAGGGCTGATTGAATTCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp GGCGGCATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGIPSAISARSAGSW*QTSSGGRAWAQLQL
Trigger: GAGCTGGAGCTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAATGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp ATGGGCGGCATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: MGGIPSAISARSAGS*WQTSSGGRAWAQLQ
Trigger: CTGGAGCTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAATGCCGCCCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCCCAGGCCCGGGCCATaGTGCACGCGCAGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLPRPGP*CTRRWS
Trigger: GGACCACCTGCGCGTGCACAATGGCCCGGGCCTGGG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTGCTACCGGAGGGTCTGGCTaGGACACTGGGCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: CLAMQDAEMETGPPGCGATGGSG*DTGPSV
Trigger: CACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGT...AGCACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp CAGTGCCTGGCCATGCAAGATGCTGAAATGGAGACTGGCCCGCCAGGCTGCGGTCAAGCTCCCCTTCCATaGAGTCACGTGGGCCCCATG +
Preference number: 5 (lower is better)
Translates to: QCLAMQDAEMETGPPGCGQAPLP*SHVGPM
Trigger: CATGGGGCCCACGTGACTCAATGGAAGGGGAGCTTG...ACCGCAGCCTGGCGGGCCAGTCTCCATTTCAGCATCTTGCATGGCCAGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS TCA 90 bp CAGGCTGTCACTGGGCCCAGAGTCCAGTCCAAGCTCCCCTTCCATTaGGTCACGTGGGCCCCATGGGTACGGCTGCTCTTCCTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: QAVTGPRVQSKLPFH*VTWAPWVRLLFLLD
Trigger: ATCAAGCAGGAAGAGCAGCCGTACCCATGGGGCCCACGTGACTCAATGGAAGGGGAGCTTGGACTGGACTCTGGGCCCAGTGACAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp ATGGCAGCCACCACGGTCCAGAGCGAGATCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGGTCAGGAAAGACAGGGGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: MAATTVQSEISAVGN*GSRIMRSGKTGALS
Trigger: AGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGTGGCTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp GAGACTGGCCCGCCAGGCTGCGGTGCTGGGAGCCATGGAGTGATGCACCAAAATCTGATGAGGTTGGGTTaGGGGCTGCGCAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: ETGPPGCGAGSHGVMHQNLMRLG*GLRRRW
Trigger: CCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAG...ATTTTGGTGCATCACTCCATGGCTCCCAGCACCGCAGCCTGGCGGGCCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 90 bp TCCAGAGCGAGATCTCTGCTGTGGGCAACTGGGGCTCACGCATCATaGGGTCAGGAAAGACAGGGGCCCTATCTGGAAAGGGCGGGAACT +
Preference number: 5 (lower is better)
Translates to: SRARSLLWATGAHAS*GQERQGPYLERAGT
Trigger: AGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp GCTCTGCTGATGAGGTTGGGTTTGGGGCTGCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAGGCTGTCACTGGGCCCAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: ALLMRLGLGLRRRWG*VLYKQQAVTGPRVQ
Trigger: CTGGACTCTGGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCCAGCAGCTGGCTAGCTaGGGCATCCACCTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLQQLAS*GIHLPL
Trigger: GAGAGGAAGGTGGATGCCCAAGCTAGCCAGCTGCTG...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp AGCACCCACTTGCCCAGCCCTCCTGGACAGAGTCTCATTCCTTGGTGGCTACTCGCTCTGCTGATGAGGTaGGGTTTGGGGCTGCGCAGA +
Preference number: 5 (lower is better)
Translates to: STHLPSPPGQSLIPWWLLALLMR*GLGLRR
Trigger: TCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGC...GAGTAGCCACCAAGGAATGAGACTCTGTCCAGGAGGGCTGGGCAAGTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp CACAAGGCTCTTCCCTGGGTTCTGCCTGGACCGGAGGGTCTGGCTTaGACACTGGGCCATCTGTGTCCAGGGACATCAGGGTTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: HKALPWVLPGPEGLA*TLGHLCPGTSGFCS
Trigger: ACTACAAAACCCTGATGTCCCTGGACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp GCGCAGAAGATGGGGGTGGGTTCTTTACAAGCAGCAGGCTGTCACTaGGCCCAGAGTCCAGTCCAAGCTCCCCTTCCATTGAGTCACGTG +
Preference number: 5 (lower is better)
Translates to: AQKMGVGSLQAAGCH*AQSPVQAPLPLSHV
Trigger: CACGTGACTCAATGGAAGGGGAGCTTGGACTGGACTCTGGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp GTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCACACACAAGG +
Preference number: 5 (lower is better)
Translates to: VLCRHQSLCSCVCSH*DFSLFGVMLLPHTR
Trigger: CCTTGTGTGTGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 90 bp GGAGGATATGTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTaGAGTCACTGGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GGYVLCRHQSLCSCV*SHWDFSLFGVMLLP
Trigger: TGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGACATATCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 90 bp AACACACAGGGCTTCTTCTCGCTTTACCTGGGAGGATATGTCCTGTaGCGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTGGGAT +
Preference number: 5 (lower is better)
Translates to: NTQGFFSLYLGGYVL*RHQSLCSCVCSHWD
Trigger: ATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGACATATCCTCCCAGGTAAAGCGAGAAGAAGCCCTGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp GCACAGGTCTGGAAGAGCCTAGAAGCAGCTCTGAGCACTGGAGGTTTTAGTCTTATCCATGTCCCATTCTaGAGCCTGCATGGGCGGCAT +
Preference number: 5 (lower is better)
Translates to: AQVWKSLEAALSTGGFSLIHVPF*SLHGRH
Trigger: ATGCCGCCCATGCAGGCTCAAGAATGGGACATGGAT...AAGACTAAAACCTCCAGTGCTCAGAGCTGCTTCTAGGCTCTTCCAGACCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGCGCACGCCGAAGGTCTaGCCGCATTCCAGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: WETLVHSHNKITIQPIAGRTPKV*PHSRQE
Trigger: CTCTTGCCTGGAATGCGGCAAGACCTTCGGCGTGCG...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATAGGCCAGAGTGGCAGTaGAAGCTCTTCTCGCACTCT +
Preference number: 5 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHRPEWQ*KLFSHS
Trigger: AGAGTGCGAGAAGAGCTTCAACTGCCACTCTGGCCT...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 90 bp GTGGGAATATCTCTCTCTGCCAAATCCTGCTGGTCCCATACACACTaGTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCCTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VGISLSAKSCWSHTH*CSSCLIRDKRSWAE
Trigger: CTCTGCCCAGGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGATATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TGGGAGACCTTGGTCCACAGCCACAATAAAATAACAATACAGCCAATAGCTGGGTTTCGGATGAAGCTCTaGCCGCAGAGCGCGCACTGG +
Preference number: 5 (lower is better)
Translates to: WETLVHSHNKITIQPIAGFRMKL*PQSAHW
Trigger: CCAGTGCGCGCTCTGCGGCAAGAGCTTCATCCGAAA...CCCAGCTATTGGCTGTATTGTTATTTTATTGTGGCTGTGGACCAAGGTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TCCACAAGAGGAGTGGGAAAGCCGTTTTTGACACAAACAAGGGTCCTGGGGCATGGAACTGAAAAGGCATaGGTCTCCTGGCATCCATGT +
Preference number: 5 (lower is better)
Translates to: STRGVGKPFLTQTRVLGHGTEKA*VSWHPC
Trigger: ACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCC...ATGCCCCAGGACCCTTGTTTGTGTCAAAAACGGCTTTCCCACTCCTCTTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TGCGGCTTGGCCGCACTGTTCTCATGTGGTCTTGCTAAACAACTATCTCACCTGGGCTGCTCTTCCTGCTaGATCCAGGACAAAATGTCA +
Preference number: 5 (lower is better)
Translates to: CGLAALFSCGLAKQLSHLGCSSC*IQDKMS
Trigger: TGACATTTTGTCCTGGATCAAGCAGGAAGAGCAGCC...CAGGTGAGATAGTTGTTTAGCAAGACCACATGAGAACAGTGCGGCCAAGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS-3UTR CAA 90 bp TTTCCACTATTTAAGACTTTACATTTAAACAGGTGCACACATACACCCCAAGACAAGGTCACCGGGACCTaGGGGGCCTCCCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FPLFKTLHLNRCTHTPQDKVTGT*GASPLL
Trigger: CAGCAAGGGGGAGGCCCCCAAGGTCCCGGTGACCTT...GTCTTGGGGTGTATGTGTGCACCTGTTTAAATGTAAAGTCTTAAATAGTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 90 bp TCTGAATTAGGATCTGTGGGAATATCTCTCTCTGCCAAATCCTGCTaGTCCCATACACACTGCTGTTCTTCCTGCTTAATCCGGGACAAA +
Preference number: 5 (lower is better)
Translates to: SELGSVGISLSAKSC*SHTHCCSSCLIRDK
Trigger: TTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGATATTCCCACAGATCCTAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp CGCGCCGTGAGCAAGGAGGCTCCGCCGCAGGCCGCCTaGGCAGCAGCTACCGCAGCCACTGCCCGCACCAGC +
Preference number: 6 (lower is better)
Translates to: RAVSKEAPPQAA*AAATAATARTS
Trigger: GCTGGTGCGGGCAGTGGCTGCGGTAGCTGCTGCCCAGGCGGCCTGCGGCGGAGCCTCCTTGCTCACGGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp CCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTGGTaGCAGACCTCCTCCGGGGGCAGAGCCTGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: PSAISARSAGSW*QTSSGGRAWAQ
Trigger: CTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp ATTCCCTCGGCCATTTCCGCGCGTAGCGCCGGCTCCTaGTGGCAGACCTCCTCCGGGGGCAGAGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: IPSAISARSAGS*WQTSSGGRAWA
Trigger: GGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTACGCGCGGAAATGGCCGAGGGAAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp GCCGCAGGCCGCCTGGGCAGCAGCTACCGCAGCCACTaGCCGCACCAGCACCGGTACTATTGCCACTACCCG +
Preference number: 6 (lower is better)
Translates to: AAGRLGSSYRSH*PHQHRYYCHYP
Trigger: CGGGTAGTGGCAATAGTACCGGTGCTGGTGCGGGCAGTGGCTGCGGTAGCTGCTGCCCAGGCGGCCTGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CAA 72 bp ACCTGGAGTGGCCGCGGGGCCCCCAGGCCCGGGCCATaGTGCACGCGCAGGTGGTCCTTGAGTGACTCCTTG +
Preference number: 6 (lower is better)
Translates to: TWSGRGAPRPGP*CTRRWSLSDSL
Trigger: CAAGGAGTCACTCAAGGACCACCTGCGCGTGCACAATGGCCCGGGCCTGGGGGCCCCGCGGCCACTCCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp AGGTCTTGCCGCATTCCAGGCAAGAGTAGGGCTTGCTaGGCGCGCCGTGAGCAAGGAGGCTCCGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: RSCRIPGKSRAC*ARREQGGSAAG
Trigger: GCCTGCGGCGGAGCCTCCTTGCTCACGGCGCGCGCAGCAAGCCCTACTCTTGCCTGGAATGCGGCAAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp ATGCTGCTCCCACACACAAGGCTCTTCCCTGGGTTCTaGCTGGACCGGAGGGTCTGGCTTGGACACTGGGCC +
Preference number: 6 (lower is better)
Translates to: MLLPHTRLFPGF*LDRRVWLGHWA
Trigger: GGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCTTGTGTGTGGGAGCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp CTGAATGGCAGCCACCACGGTCCAGAGCGAGATCTCTaGTGTGGGCAACTGGGGCTCACGCATCATGCGGTC +
Preference number: 6 (lower is better)
Translates to: LNGSHHGPERDL*CGQLGLTHHAV
Trigger: GACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGTGGCTGCCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp AGGCTCTTCCCTGGGTTCTGCCTGGACCGGAGGGTCTaGCTTGGACACTGGGCCATCTGTGTCCAGGGACAT +
Preference number: 6 (lower is better)
Translates to: RLFPGFCLDRRV*LGHWAICVQGH
Trigger: ATGTCCCTGGACACAGATGGCCCAGTGTCCAAGCCAGACCCTCCGGTCCAGGCAGAACCCAGGGAAGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp ACCACGGTCCAGAGCGAGATCTCTGCTGTGGGCAACTaGGGCTCACGCATCATGCGGTCAGGAAAGACAGGG +
Preference number: 6 (lower is better)
Translates to: TTVQSEISAVGN*GSRIMRSGKTG
Trigger: CCCTGTCTTTCCTGACCGCATGATGCGTGAGCCCCAGTTGCCCACAGCAGAGATCTCGCTCTGGACCGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CAA 72 bp AGCCAAGGCGGGCAGGCTCTGCTGATGAGGTTGGGTTaGGGGCTGCGCAGAAGATGGGGGTGGGTTCTTTAC +
Preference number: 6 (lower is better)
Translates to: SQGGQALLMRLG*GLRRRWGWVLY
Trigger: GTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAGAGCCTGCCCGCCTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp ATGAGGTTGGGTTTGGGGCTGCGCAGAAGATGGGGGTaGGTTCTTTACAAGCAGCAGGCTGTCACTGGGCCC +
Preference number: 6 (lower is better)
Translates to: MRLGLGLRRRWG*VLYKQQAVTGP
Trigger: GGGCCCAGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp TGGCCCCGAACACACAGGGCTTCTTCTCGCTTTACCTaGGAGGATATGTCCTGTGCCGGCACCAGAGTCTCT +
Preference number: 6 (lower is better)
Translates to: WPRTHRASSRFT*EDMSCAGTRVS
Trigger: AGAGACTCTGGTGCCGGCACAGGACATATCCTCCCAGGTAAAGCGAGAAGAAGCCCTGTGTGTTCGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp GTCCTGTGCCGGCACCAGAGTCTCTGTTCCTGTGTCTaGAGTCACTGGGATTTCTCTCTCTTCGGGGTGATG +
Preference number: 6 (lower is better)
Translates to: VLCRHQSLCSCV*SHWDFSLFGVM
Trigger: CATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCGGCACAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp CGGCACCAGAGTCTCTGTTCCTGTGTCTGCAGTCACTaGGATTTCTCTCTCTTCGGGGTGATGCTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: RHQSLCSCVCSH*DFSLFGVMLLP
Trigger: TGGGAGCAGCATCACCCCGAAGAGAGAGAAATCCCAGTGACTGCAGACACAGGAACAGAGACTCTGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp CTGCTGATGAGGTTGGGTTTGGGGCTGCGCAGAAGATaGGGGTGGGTTCTTTACAAGCAGCAGGCTGTCACT +
Preference number: 6 (lower is better)
Translates to: LLMRLGLGLRRR*GWVLYKQQAVT
Trigger: AGTGACAGCCTGCTGCTTGTAAAGAACCCACCCCCATCTTCTGCGCAGCCCCAAACCCAACCTCATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS TCA 72 bp GGAAAGACAGGGGCCCTATCTGGAAAGGGCGGGAACTaGAAAGGCATTGGTCTCCTGGCATCCATGTCCCAT +
Preference number: 6 (lower is better)
Translates to: GKTGALSGKGGN*KGIGLLASMSH
Trigger: ATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp GGCCCTATCTGGAAAGGGCGGGAACTGAAAAGGCATTaGTCTCCTGGCATCCATGTCCCATTCTTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: GPIWKGRELKRH*SPGIHVPFLSL
Trigger: CAGGCTCAAGAATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp ACGCATCATGCGGTCAGGAAAGACAGGGGCCCTATCTaGAAAGGGCGGGAACTGAAAAGGCATTGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: THHAVRKDRGPI*KGRELKRHWSP
Trigger: AGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCCCTGTCTTTCCTGACCGCATGATGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CAA 72 bp GGGCCCTATCTGGAAAGGGCGGGAACTGAAAAGGCATaGGTCTCCTGGCATCCATGTCCCATTCTTGAGCCT +
Preference number: 6 (lower is better)
Translates to: GPYLERAGTEKA*VSWHPCPILEP
Trigger: AGGCTCAAGAATGGGACATGGATGCCAGGAGACCAATGCCTTTTCAGTTCCCGCCCTTTCCAGATAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS CCA 72 bp TGCTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCCTaGGCAGAGATGGGGGAGTCAGTGATGGATTCTGTG +
Preference number: 6 (lower is better)
Translates to: CCSSCLIRDKRS*AEMGESVMDSV
Trigger: CACAGAATCCATCACTGACTCCCCCATCTCTGCCCAGGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8
CDS GCA 72 bp TCTCTCTCTGCCAAATCCTGCTGGTCCCATACACACTaGTGTTCTTCCTGCTTAATCCGGGACAAAAGGTCC +
Preference number: 6 (lower is better)
Translates to: SLSAKSCWSHTH*CSSCLIRDKRS
Trigger: GGACCTTTTGTCCCGGATTAAGCAGGAAGAACAGCAGTGTGTATGGGACCAGCAGGATTTGGCAGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061890.8