Pregenerated sensors for ZFP280C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036916Ensembl transcript IDs: ENSMUST00000072292.12, ENSMUST00000076635.13, ENSMUST00000088898.11, ENSMUST00000114940.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTaGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GKLCSNLFGAPCRHR*PDTISLTEGQSGRK Trigger: CTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 90 bp | AAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTaGAGGCATCGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: KVLRGKLCSNLFGAP*RHRWPDTISLTEGQ Trigger: CTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 90 bp | GATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTaGCTAAGAACTGATAAAATCCTAAGGCCACACACTGAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: DTISLTEGQSGRKGL*LRTDKILRPHTEAG Trigger: ACCTGCTTCAGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 90 bp | CTCATAAGCTTACACTTAAGAACCAAAGTCCTCAGAGGGAAGTTGTaGTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LISLHLRTKVLRGKL*SNLFGAPCRHRWPD Trigger: ATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTTCTTAAGTGTAAGCTTATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTGTCTTGCACCAGGTTaGACAAGCTTCATAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RWPDTISLTEGQSGRKGLCLAPG*TSFIEQ Trigger: CTGCTCTATGAAGCTTGTGCAACCTGGTGCAAGACA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCAATTCCACCTTGTCTTaGACCAGGTTGCACAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RWPDTISLTEGQSGRKGLNSTLS*TRLHKL Trigger: AAGCTTGTGCAACCTGGTGCAAGACAAGGTGGAATT...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR CAA 90 bp | CAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTaGCAGGCATCGGTGGCCAGATACTATCAGCCTTACGGAAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSPQREVVLKSIWCT*QASVARYYQPYGRP Trigger: TGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTTCTCCAGCATCAACTaGAGAATCAAAGCACATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RWPDTISLTEGQSGRKGLFSSIN*RIKAHA Trigger: AGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCAAGCAGGTCTCCCAGTaGAATAAATCATATTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RWPDTISLTEGQSGRKGLKQVSQ*NKSYSL Trigger: CAAGGAATATGATTTATTTCACTGGGAGACCTGCTT...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGGAATCTCCCAGCATCTaGAAGCTGGAAAGAGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KKRQAEIYESKVSLISIVESPSI*KLERAG Trigger: TCCAGCTCTTTCCAGCTTTCAGATGCTGGGAGATTC...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCGTTGTGAATTGTAACTaGCTTCATGAAAACACTGCA | + |
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Preference number: 2 (lower is better) Translates to: RWPDTISLTEGQSGRKGLVVNCN*LHENTA Trigger: TGCAGTGTTTTCATGAAGGCAGTTACAATTCACAAC...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCGGTAGGAAGGGACTCTaGCTAAGAACTGATAAAATC | + |
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Preference number: 2 (lower is better) Translates to: QREVVLKSIWCTLQASVAGRKGL*LRTDKI Trigger: GATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACC...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGTGTCTTGCACCAGGTTaGACAAGCTTCATAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KKRQAEIYESKVSLISIVCLAPG*TSFIEQ Trigger: CTGCTCTATGAAGCTTGTGCAACCTGGTGCAAGACA...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCCAGCATCTGAAAGCTaGAAAGAGCTGGATAATGCG | + |
|
Preference number: 2 (lower is better) Translates to: KKRQAEIYESKVSLISIVPASES*KELDNA Trigger: CGCATTATCCAGCTCTTTCCAGCTTTCAGATGCTGG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGGAATCTCCCAGCATCTaGAAGCTGGAAAGAGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PSPASTGESKHMLTHVNLESPSI*KLERAG Trigger: TCCAGCTCTTTCCAGCTTTCAGATGCTGGGAGATTC...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGGAATCTCCCAGCATCTaGAAGCTGGAAAGAGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEESPSI*KLERAG Trigger: TCCAGCTCTTTCCAGCTTTCAGATGCTGGGAGATTC...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCGTTGTGAATTGTAACTaGCTTCATGAAAACACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QREVVLKSIWCTLQASVAVVNCN*LHENTA Trigger: TGCAGTGTTTTCATGAAGGCAGTTACAATTCACAAC...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTCCAGCATCTGAAAGCTaGAAAGAGCTGGATAATGCG | + |
|
Preference number: 2 (lower is better) Translates to: SGRKGLCLRTDKILRPHTPASES*KELDNA Trigger: CGCATTATCCAGCTCTTTCCAGCTTTCAGATGCTGG...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGGAGCAGGAATCTATTTaGACAAGCCATCAGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEEQESI*TSHQKR Trigger: CCGCTTCTGATGGCTTGTTCAAATAGATTCCTGCTC...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGTGTCTTGCACCAGGTTaGACAAGCTTCATAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QNKNRLQQLRCLLQHQLECLAPG*TSFIEQ Trigger: CTGCTCTATGAAGCTTGTGCAACCTGGTGCAAGACA...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGGGTAGGAAGGGACTCTaGCTAAGAACTGATAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: KKRQAEIYESKVSLISIVGRKGL*LRTDKI Trigger: GATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACC...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTCCAGCATCTGAAAGCTaGAAAGAGCTGGATAATGCG | + |
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Preference number: 2 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFPASES*KELDNA Trigger: CGCATTATCCAGCTCTTTCCAGCTTTCAGATGCTGG...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTGTTGTCTTCATTGAATaGGAACACTGTCCCGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGRKGLCLRTDKILRPHTVVFIE*EHCPGV Trigger: TACTCCGGGACAGTGTTCCCATTCAATGAAGACAAC...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTGAATCTCCCAGCATCTaGAAGCTGGAAAGAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: YSLERETSHQLSSLNGNTESPSI*KLERAG Trigger: TCCAGCTCTTTCCAGCTTTCAGATGCTGGGAGATTC...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGAGCAGCTATACCATTTaGCACAAAATATTCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: KKRQAEIYESKVSLISIVSSYTI*HKIFRR Trigger: CCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCT...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTAAGCAGGTCTCCCAGTaGAATAAATCATATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SGRKGLCLRTDKILRPHTKQVSQ*NKSYSL Trigger: CAAGGAATATGATTTATTTCACTGGGAGACCTGCTT...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTGTTGTGAATTGTAACTaGCTTCATGAAAACACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SGRKGLCLRTDKILRPHTVVNCN*LHENTA Trigger: TGCAGTGTTTTCATGAAGGCAGTTACAATTCACAAC...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTCTACAGCAACTAAGGTaGCTTCTCCAGCATCAACTG | + |
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Preference number: 2 (lower is better) Translates to: YSLERETSHQLSSLNGNTLQQLR*LLQHQL Trigger: CAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAG...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTAATTCCACCTTGTCTTaGACCAGGTTGCACAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: YSLERETSHQLSSLNGNTNSTLS*TRLHKL Trigger: AAGCTTGTGCAACCTGGTGCAAGACAAGGTGGAATT...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTGTTGTGAATTGTAACTaGCTTCATGAAAACACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFVVNCN*LHENTA Trigger: TGCAGTGTTTTCATGAAGGCAGTTACAATTCACAAC...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACCTACAGCAACTAAGGTaGCTTCTCCAGCATCAACTG | + |
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Preference number: 2 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYLQQLR*LLQHQL Trigger: CAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAG...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACCCAGCATCTGAAAGCTaGAAAGAGCTGGATAATGCG | + |
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Preference number: 2 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYPASES*KELDNA Trigger: CGCATTATCCAGCTCTTTCCAGCTTTCAGATGCTGG...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGCTCAGAGGGAAGTTGTaGTCAAATCTATTTGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLYICGQETSAFLVPIFLLRGKL*SNLFGA Trigger: TGCACCAAATAGATTTGAGCACAACTTCCCTCTGAG...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGAAGCAGGTCTCCCAGTaGAATAAATCATATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLYICGQETSAFLVPIFLKQVSQ*NKSYSL Trigger: CAAGGAATATGATTTATTTCACTGGGAGACCTGCTT...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCCATCAGTTGTCTTCATaGAATGGGAACACTGTCCCG | + |
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Preference number: 3 (lower is better) Translates to: RWPDTISLTEGQSGRKGLHQLSS*NGNTVP Trigger: CGGGACAGTGTTCCCATTCAATGAAGACAACTGATG...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR CCA 72 bp | TGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTaGCCAGATACTATCAGCCTTACGGAAGGCCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CSNLFGAPCRHR*PDTISLTEGQS Trigger: TGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 72 bp | AGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTaGCTAAGAACTGATAAAATCCTAAGGCCACACACT | + |
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Preference number: 3 (lower is better) Translates to: SLTEGQSGRKGL*LRTDKILRPHT Trigger: AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 72 bp | AGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTaGAGGCATCGGTGGCCAGATACTATCAGCCTTACG | + |
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Preference number: 3 (lower is better) Translates to: RGKLCSNLFGAP*RHRWPDTISLT Trigger: CGTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR GCA 72 bp | AGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTaGACCTTGCAGGCATCGGTGGCCAGATACTATCAG | + |
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Preference number: 3 (lower is better) Translates to: SPQREVVLKSIW*TLQASVARYYQ Trigger: CTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| 3UTR-3UTR CAA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGAAATTCCACCTTGTCTaGCACCAGGTTGCACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KKRQAEIYESKVSLISIVKFHLV*HQVAQA Trigger: AGCTTGTGCAACCTGGTGCAAGACAAGGTGGAATTT...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCATCAGTTGTCTTCATaGAATGGGAACACTGTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: KKRQAEIYESKVSLISIVHQLSS*NGNTVP Trigger: CGGGACAGTGTTCCCATTCAATGAAGACAACTGATG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR TCA 72 bp | CCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTaGATGGGAACACTGTCCCGGAGTACACTGGACATT | + |
|
Preference number: 3 (lower is better) Translates to: PWKERLVISCLH*MGTLSRSTLDI Trigger: AATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR GCA 72 bp | TTACACTTAAGAACCAAAGTCCTCAGAGGGAAGTTGTaGTCAAATCTATTTGGTGCACCTTGCAGGCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: LHLRTKVLRGKL*SNLFGAPCRHR Trigger: CCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTTCTTAAGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CCA 72 bp | ATAAGAATCTCCCAGCATCTGAAAGCTGGAAAGAGCTaGATAATGCGAGCTAGTGTTGTGAATTGTAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: IRISQHLKAGKS*IMRASVVNCNC Trigger: GCAGTTACAATTCACAACACTAGCTCGCATTATCCAGCTCTTTCCAGCTTTCAGATGCTGGGAGATTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR GCA 72 bp | CTGAAACAAAACAAGAATAGACTACAGCAACTAAGGTaGCTTCTCCAGCATCAACTGGAGAATCAAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LKQNKNRLQQLR*LLQHQLENQST Trigger: TGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTGTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACAAATTCCACCTTGTCTaGCACCAGGTTGCACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYKFHLV*HQVAQA Trigger: AGCTTGTGCAACCTGGTGCAAGACAAGGTGGAATTT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGAAATTCCACCTTGTCTaGCACCAGGTTGCACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLYICGQETSAFLVPIFLKFHLV*HQVAQA Trigger: AGCTTGTGCAACCTGGTGCAAGACAAGGTGGAATTT...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCATGTGGCACTGGAGCTaGAAGGGGTTGGGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLMWHWS*KGLGYC Trigger: GCAGTACCCCAACCCCTTCCAGCTCCAGTGCCACAT...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCATGTGGCACTGGAGCTaGAAGGGGTTGGGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVAMWHWS*KGLGYC Trigger: GCAGTACCCCAACCCCTTCCAGCTCCAGTGCCACAT...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTGGGCTTACCAGTTGTaGTTGCAACTGTTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLWAYQL*LQLFEG Trigger: GCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTTTGGAACTGAGAGCTaGAGAGAAGTGCTTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLFGTES*REVLGM Trigger: CATCCCAAGCACTTCTCTTCAGCTCTCAGTTCCAAA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTGTTGGCATGTAGTATaGCTTTCCCAGGTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLCWHVV*LSQVSL Trigger: CAACGAGACCTGGGAAAGCCATACTACATGCCAACA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCGGCGTGTTTCAGAAATaGTCGCACTCGTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVAGVFQK*SHSSLA Trigger: AGCCAAAGACGAGTGCGAGCATTTCTGAAACACGCC...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCCTTACCAGTTGTGGTTaGAACTGTTTGAGGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLLTSCG*NCLRAS Trigger: ACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAG...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTTTGATAGTACAGTTTaGGAAGAAGCCCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLFDSTV*EEAPEG Trigger: GCCTTCAGGGGCTTCTTCCCAAACTGTACTATCAAA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCAGTTTAGACACAGTCTaGCCATCAGAACTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLSLDTV*PSELSE Trigger: TTCAGAGAGTTCTGATGGTCAGACTGTGTCTAAACT...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTTTGGAACTGAGAGCTaGAGAGAAGTGCTTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVAFGTES*REVLGM Trigger: CATCCCAAGCACTTCTCTTCAGCTCTCAGTTCCAAA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTACTTTCTGCTGCCATaGTTCCAACTCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLYFLLP*FQLFFF Trigger: GAAGAAGAAGAGTTGGAACCATGGCAGCAGAAAGTA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTGTTGGCATGTAGTATaGCTTTCCCAGGTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVACWHVV*LSQVSL Trigger: CAACGAGACCTGGGAAAGCCATACTACATGCCAACA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTCGTCGTCTTTACTTTaGCTTTCTTCTACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLSSSLL*LSSTFC Trigger: GCAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCACCATCAGAACTCTCTaGAGATTTGAGAGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVATIRTL*RFESRM Trigger: CATCCTGCTCTCAAATCTTCAGAGAGTTCTGATGGT...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTATGTGGCACTGGAGCTaGAAGGGGTTGGGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFMWHWS*KGLGYC Trigger: GCAGTACCCCAACCCCTTCCAGCTCCAGTGCCACAT...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CAA 72 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTaGCAGGCATCGGTGGCCAGATACTATCAGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCT*QASVARYYQPY Trigger: GTAAGGCTGATAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CAA 72 bp | CCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTaGGTGCACCTTGCAGGCATCGGTGGCCAGATACTA | + |
|
Preference number: 4 (lower is better) Translates to: PKSSEGSCAQIY*VHLAGIGGQIL Trigger: TAGTATCTGGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCCATTTAAAAGTGGTGTaGGTCTTCTGGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVAHLKVV*VFWLSS Trigger: TGAGGAAAGCCAGAAGACTCACACCACTTTTAAATG...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTTTAGACTTTGGAACTaGGAGCTGAAGAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVAFRLWN*ELKRSA Trigger: AGCACTTCTCTTCAGCTCTCAGTTCCAAAGTCTAAA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTCTTCTACTTTCTGCTaGCATGGTTCCAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVASSTFC*HGSNSS Trigger: AGAAGAGTTGGAACCATGGCAGCAGAAAGTAGAAGA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGTGGGCTTACCAGTTGTaGTTGCAACTGTTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVWAYQL*LQLFEG Trigger: GCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCA...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTCTTCAGATCTATGCTaGATTTGTTTTTCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVASSDLC*ICFSWC Trigger: GCACCAGGAAAAACAAATTCAGCATAGATCTGAAGA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTCAAAAATTGTAGTCTaGATTTCGGGCAACGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RWPDTISLTEGQSGRKGLSKIVV*ISGNDK Trigger: TTTATCGTTGCCCGAAATGCAGACTACAATTTTTGA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCAGCAACGCTTCATGTaGCACTTCAAAGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVQQRFM*HFKGSR Trigger: TCTGGATCCTTTGAAGTGCCACATGAAGCGTTGCTG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCAGGTCTCGTTGTTCTaGTTTTCAAGTTCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVQVSLF*FSSSKW Trigger: CCACTTGGAACTTGAAAAGCAGAACAACGAGACCTG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTTGTTGGCATGTAGTATaGCTTTCCCAGGTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTCWHVV*LSQVSL Trigger: CAACGAGACCTGGGAAAGCCATACTACATGCCAACA...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGTGGGCTTACCAGTTGTaGTTGCAACTGTTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLWAYQL*LQLFEG Trigger: GCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCA...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGTCTTCTACTTTCTGCTaGCATGGTTCCAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVSSTFC*HGSNSS Trigger: AGAAGAGTTGGAACCATGGCAGCAGAAAGTAGAAGA...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTCAAAAATTGTAGTCTaGATTTCGGGCAACGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QREVVLKSIWCTLQASVASKIVV*ISGNDK Trigger: TTTATCGTTGCCCGAAATGCAGACTACAATTTTTGA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTAGCAGGATGAAAGCTTaGCAAAGCAACCAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTSRMKA*QSNQCI Trigger: AATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCT...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGAGCAGGATGAAAGCTTaGCAAAGCAACCAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQSRMKA*QSNQCI Trigger: AATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTTTTGATAGTACAGTTTaGGAAGAAGCCCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTFDSTV*EEAPEG Trigger: GCCTTCAGGGGCTTCTTCCCAAACTGTACTATCAAA...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGTTTGATAGTACAGTTTaGGAAGAAGCCCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQFDSTV*EEAPEG Trigger: GCCTTCAGGGGCTTCTTCCCAAACTGTACTATCAAA...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTCAGCAACGCTTCATGTaGCACTTCAAAGGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFQQRFM*HFKGSR Trigger: TCTGGATCCTTTGAAGTGCCACATGAAGCGTTGCTG...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTTGTTGGCATGTAGTATaGCTTTCCCAGGTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFCWHVV*LSQVSL Trigger: CAACGAGACCTGGGAAAGCCATACTACATGCCAACA...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CAA 72 bp | TCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATaGAATGGGAACACTGTCCCGGAGTACACTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLERETSHQLSS*NGNTVPEYTGH Trigger: ATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGAGTTTAGACACAGTCTaGCCATCAGAACTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQSLDTV*PSELSE Trigger: TTCAGAGAGTTCTGATGGTCAGACTGTGTCTAAACT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCAGTTTTTCTTTATCTaGGTCAGTGGTAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVQFFFI*VSGSFA Trigger: AGCAAAGCTACCACTGACTCAGATAAAGAAAAACTG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTCATTTAAAAGTGGTGTaGGTCTTCTGGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTHLKVV*VFWLSS Trigger: TGAGGAAAGCCAGAAGACTCACACCACTTTTAAATG...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGCATTTAAAAGTGGTGTaGGTCTTCTGGCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQHLKVV*VFWLSS Trigger: TGAGGAAAGCCAGAAGACTCACACCACTTTTAAATG...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGTCTTCAGATCTATGCTaGATTTGTTTTTCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVSSDLC*ICFSWC Trigger: GCACCAGGAAAAACAAATTCAGCATAGATCTGAAGA...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTCAGGTCTCGTTGTTCTaGTTTTCAAGTTCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFQVSLF*FSSSKW Trigger: CCACTTGGAACTTGAAAAGCAGAACAACGAGACCTG...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGCAGGTCTCGTTGTTCTaGTTTTCAAGTTCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLQVSLF*FSSSKW Trigger: CCACTTGGAACTTGAAAAGCAGAACAACGAGACCTG...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGCAGGTCTCGTTGTTCTaGTTTTCAAGTTCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEQVSLF*FSSSKW Trigger: CCACTTGGAACTTGAAAAGCAGAACAACGAGACCTG...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGCTTACCAGTTGTGGTTaGAACTGTTTGAGGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLLTSCG*NCLRAS Trigger: ACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAG...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGAGCAGGATGAAAGCTTaGCAAAGCAACCAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLSRMKA*QSNQCI Trigger: AATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCT...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGTTTGATAGTACAGTTTaGGAAGAAGCCCCTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEFDSTV*EEAPEG Trigger: GCCTTCAGGGGCTTCTTCCCAAACTGTACTATCAAA...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGCTTATTTATCATGTCTaGGCAGCAACGCTTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQLIYHV*AATLHV Trigger: CACATGAAGCGTTGCTGCCCAGACATGATAAATAAG...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTCTTATTTATCATGTCTaGGCAGCAACGCTTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTLIYHV*AATLHV Trigger: CACATGAAGCGTTGCTGCCCAGACATGATAAATAAG...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGATGTGGCACTGGAGCTaGAAGGGGTTGGGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYICGQETSAFLVPIFLMWHWS*KGLGYC Trigger: GCAGTACCCCAACCCCTTCCAGCTCCAGTGCCACAT...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CAA 72 bp | AGCTTACACTTAAGAACCAAAGTCCTCAGAGGGAAGTaGTGCTCAAATCTATTTGGTGCACCTTGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLRTKVLRGK*CSNLFGAPCRH Trigger: ATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTTCTTAAGTGTAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGTCGTCGTCTTTACTTTaGCTTTCTTCTACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQSSSLL*LSSTFC Trigger: GCAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGA...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTAGTTTAGACACAGTCTaGCCATCAGAACTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFSLDTV*PSELSE Trigger: TTCAGAGAGTTCTGATGGTCAGACTGTGTCTAAACT...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGTCTTCAGATCTATGCTaGATTTGTTTTTCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQSSDLC*ICFSWC Trigger: GCACCAGGAAAAACAAATTCAGCATAGATCTGAAGA...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGTCTTCTACTTTCTGCTaGCATGGTTCCAACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLSSTFC*HGSNSS Trigger: AGAAGAGTTGGAACCATGGCAGCAGAAAGTAGAAGA...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGTACTTTCTGCTGCCATaGTTCCAACTCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEYFLLP*FQLFFF Trigger: GAAGAAGAAGAGTTGGAACCATGGCAGCAGAAAGTA...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGTACTTTCTGCTGCCATaGTTCCAACTCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLYFLLP*FQLFFF Trigger: GAAGAAGAAGAGTTGGAACCATGGCAGCAGAAAGTA...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTCAGTTTTTCTTTATCTaGGTCAGTGGTAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFQFFFI*VSGSFA Trigger: AGCAAAGCTACCACTGACTCAGATAAAGAAAAACTG...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGAGTGTTTTCATGAGATaGTCTGAAGTGAGTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQSVFMR*SEVSFY Trigger: GTAGAAACTCACTTCAGATCATCTCATGAAAACACT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTTTTGGAACTGAGAGCTaGAGAGAAGTGCTTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTFGTES*REVLGM Trigger: CATCCCAAGCACTTCTCTTCAGCTCTCAGTTCCAAA...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGTCTTCAGATCTATGCTaGATTTGTTTTTCCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKNRLQQLRCLLQHQLESSDLC*ICFSWC Trigger: GCACCAGGAAAAACAAATTCAGCATAGATCTGAAGA...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACGGCGTGTTTCAGAAATaGTCGCACTCGTCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYGVFQK*SHSSLA Trigger: AGCCAAAGACGAGTGCGAGCATTTCTGAAACACGCC...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGTCAAAATATTGGAAATaGCTGGCTTGGAACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAEIYESKVSLISIVSKYWK*LAWNLI Trigger: TATCAAGTTCCAAGCCAGCCATTTCCAATATTTTGA...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACTGGGCTTACCAGTTGTaGTTGCAACTGTTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYWAYQL*LQLFEG Trigger: GCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCA...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| 3UTR CAA 72 bp | AAATCATATTCCTTGGAAAGAGAGACTAGTCATCAGTaGTCTTCATTGAATGGGAACACTGTCCCGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KSYSLERETSHQ*SSLNGNTVPEY Trigger: GTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATATGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGATTCATATAAGGGGTTaGCATTCTACTAACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQSPQREVVLKSIWCTLQIHIRG*HSTNFE Trigger: CTCAAAGTTAGTAGAATGGCAACCCCTTATATGAAT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTATTCATATAAGGGGTTaGCATTCTACTAACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRKGLCLRTDKILRPHTIHIRG*HSTNFE Trigger: CTCAAAGTTAGTAGAATGGCAACCCCTTATATGAAT...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGATTTGTTTTTCCTGGTaGGTTGTCTCTTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEICFSW*VVSFAC Trigger: ACAAGCAAAAGAGACAACGCACCAGGAAAAACAAAT...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGATTTGTTTTTCCTGGTaGGTTGTCTCTTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLICFSW*VVSFAC Trigger: ACAAGCAAAAGAGACAACGCACCAGGAAAAACAAAT...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTAGTTTAGACACAGTCTaGCCATCAGAACTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTSLDTV*PSELSE Trigger: TTCAGAGAGTTCTGATGGTCAGACTGTGTCTAAACT...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTTTTAGACTTTGGAACTaGGAGCTGAAGAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTFRLWN*ELKRSA Trigger: AGCACTTCTCTTCAGCTCTCAGTTCCAAAGTCTAAA...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTATTCATATAAGGGGTTaGCATTCTACTAACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFIHIRG*HSTNFE Trigger: CTCAAAGTTAGTAGAATGGCAACCCCTTATATGAAT...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTTCAAAAATTGTAGTCTaGATTTCGGGCAACGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFSKIVV*ISGNDK Trigger: TTTATCGTTGCCCGAAATGCAGACTACAATTTTTGA...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGTCAAAAATTGTAGTCTaGATTTCGGGCAACGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSPASTGESKHMLTHVNLSKIVV*ISGNDK Trigger: TTTATCGTTGCCCGAAATGCAGACTACAATTTTTGA...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACCTTACCAGTTGTGGTTaGAACTGTTTGAGGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYLTSCG*NCLRAS Trigger: ACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAG...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTTACTTTCTGCTGCCATaGTTCCAACTCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTYFLLP*FQLFFF Trigger: GAAGAAGAAGAGTTGGAACCATGGCAGCAGAAAGTA...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACAGCAGGATGAAAGCTTaGCAAAGCAACCAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYSRMKA*QSNQCI Trigger: AATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTCAGTTTTTCTTTATCTaGGTCAGTGGTAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTQFFFI*VSGSFA Trigger: AGCAAAGCTACCACTGACTCAGATAAAGAAAAACTG...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACTTTAGACTTTGGAACTaGGAGCTGAAGAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYFRLWN*ELKRSA Trigger: AGCACTTCTCTTCAGCTCTCAGTTCCAAAGTCTAAA...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACCTTATTTATCATGTCTaGGCAGCAACGCTTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYLIYHV*AATLHV Trigger: CACATGAAGCGTTGCTGCCCAGACATGATAAATAAG...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACTCGTCGTCTTTACTTTaGCTTTCTTCTACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYSSSLL*LSSTFC Trigger: GCAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGA...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTATTTGTTTTTCCTGGTaGGTTGTCTCTTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSLERETSHQLSSLNGNTICFSW*VVSFAC Trigger: ACAAGCAAAAGAGACAACGCACCAGGAAAAACAAAT...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGTCGTCGTCTTTACTTTaGCTTTCTTCTACTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYICGQETSAFLVPIFLSSSLL*LSSTFC Trigger: GCAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGA...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGCAGTTTTTCTTTATCTaGGTCAGTGGTAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYICGQETSAFLVPIFLQFFFI*VSGSFA Trigger: AGCAAAGCTACCACTGACTCAGATAAAGAAAAACTG...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR TCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACAGTGTTTTCATGAGATaGTCTGAAGTGAGTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYSVFMR*SEVSFY Trigger: GTAGAAACTCACTTCAGATCATCTCATGAAAACACT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACATTTGTTTTTCCTGGTaGGTTGTCTCTTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYICFSW*VVSFAC Trigger: ACAAGCAAAAGAGACAACGCACCAGGAAAAACAAAT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR GCA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACATTCATATAAGGGGTTaGCATTCTACTAACTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYIHIRG*HSTNFE Trigger: CTCAAAGTTAGTAGAATGGCAACCCCTTATATGAAT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCCCGTACCTGGCTTACTaGCACTGGGCTTACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWPDTISLTEGQSGRKGLPYLAY*HWAYQL Trigger: CAACTGGTAAGCCCAGTGCAAGTAAGCCAGGTACGG...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTGTGGTTGCAACTGTTaGAGGGCTAGTGGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RWPDTISLTEGQSGRKGLCGCNC*RASGGS Trigger: GCTACCACCACTAGCCCTCAAACAGTTGCAACCACA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCCTTTCCCAGGTCTCGTaGTTCTGCTTTTCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWPDTISLTEGQSGRKGLLSQVS*FCFSSS Trigger: GGAACTTGAAAAGCAGAACAACGAGACCTGGGAAAG...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCTGTGGTTGCAACTGTTaGAGGGCTAGTGGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QREVVLKSIWCTLQASVACGCNC*RASGGS Trigger: GCTACCACCACTAGCCCTCAAACAGTTGCAACCACA...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGACACCTGTCCTCGGTaGCAGTATGTTGGAAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: NQSPQREVVLKSIWCTLQDTCPR*QYVGRR Trigger: CCGTCTTCCAACATACTGCAACCGAGGACAGGTGTC...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCAGTCGGAACTTAACATaGCACTTTGGACAAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RWPDTISLTEGQSGRKGLSRNLT*HFGQDL Trigger: AAGATCTTGTCCAAAGTGCAATGTTAAGTTCCGACT...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGGACACCTGTCCTCGGTaGCAGTATGTTGGAAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPASTGESKHMLTHVNLDTCPR*QYVGRR Trigger: CCGTCTTCCAACATACTGCAACCGAGGACAGGTGTC...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TCATCAGTTGTCTTCATTGAATGGGAACACTGTCCCGGAGTACACTGGACATTTGACACCTGTCCTCGGTaGCAGTATGTTGGAAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: SSVVFIEWEHCPGVHWTFDTCPR*QYVGRR Trigger: CCGTCTTCCAACATACTGCAACCGAGGACAGGTGTC...AAATGTCCAGTGTACTCCGGGACAGTGTTCCCATTCAATGAAGACAACTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATACTATCAGCCTTACGGAAGGCCAGTCAGGTAGGAAGGGACTCTGTTCTGTTTTCTCCTaGGAGGTCAAAAATTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RWPDTISLTEGQSGRKGLCSVFS*EVKNCS Trigger: ACTACAATTTTTGACCTCCAAGGAGAAAACAGAACA...GAGTCCCTTCCTACCTGACTGGCCTTCCGTAAGGCTGATAGTATCTGGCCACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGCCGTACCTGGCTTACTaGCACTGGGCTTACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEPYLAY*HWAYQL Trigger: CAACTGGTAAGCCCAGTGCAAGTAAGCCAGGTACGG...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCCATCTGTTCAAAATATaGGAAATGGCTGGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QREVVLKSIWCTLQASVAHLFKI*EMAGLE Trigger: TTCCAAGCCAGCCATTTCCAATATTTTGAACAGATG...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCGTTCTTTAGTCCCTTaGAAGATGAACCAGGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: KKRQAEIYESKVSLISIVRSLVP*KMNQGY Trigger: GTAGCCCTGGTTCATCTTCAAAGGGACTAAAGAACG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTGAGCAGGATGAAAGCTaGGCAAAGCAACCAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTEQDES*AKQPVH Trigger: ATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCTC...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCAGTCGGAACTTAACATaGCACTTTGGACAAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QREVVLKSIWCTLQASVASRNLT*HFGQDL Trigger: AAGATCTTGTCCAAAGTGCAATGTTAAGTTCCGACT...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGGCAGGCAGAAATCTATGAGTCCAAGGTCAGCCTGATCTCCATAGTGCTTTCCCAGGTCTCGTaGTTCTGCTTTTCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKRQAEIYESKVSLISIVLSQVS*FCFSSS Trigger: GGAACTTGAAAAGCAGAACAACGAGACCTGGGAAAG...CACTATGGAGATCAGGCTGACCTTGGACTCATAGATTTCTGCCTGCCTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGTGTGGTTGCAACTGTTaGAGGGCTAGTGGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNKNRLQQLRCLLQHQLECGCNC*RASGGS Trigger: GCTACCACCACTAGCCCTCAAACAGTTGCAACCACA...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGGCATCGGTGGCCATCGTCGTCTTTACTTaGACTTTCTTCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QREVVLKSIWCTLQASVAIVVFT*TFFYFL Trigger: CAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGAT...GGCCACCGATGCCTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTCGTTCTTTAGTCCCTTaGAAGATGAACCAGGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTRSLVP*KMNQGY Trigger: GTAGCCCTGGTTCATCTTCAAAGGGACTAAAGAACG...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTCTTTCCCAGGTCTCGTaGTTCTGCTTTTCAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTLSQVS*FCFSSS Trigger: GGAACTTGAAAAGCAGAACAACGAGACCTGGGAAAG...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS TCA 90 bp | CCTGGCTTACTTGCACTGGGCTTACCAGTTGTGGTTGCAACTGTTTaGGGGCTAGTGGTGGTAGCTTTATTTGCAGATACTTTTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PGLLALGLPVVVATV*GLVVVALFADTFEL Trigger: TAACTCAAAAGTATCTGCAAATAAAGCTACCACCACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCAGTGCAAGTAAGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTTGGCTGGCTTGGAACTaGATATCTCTCCAACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTWLAWN*ISLQQR Trigger: TCTTTGTTGGAGAGATATCAAGTTCCAAGCCAGCCA...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGCGTTCTTTAGTCCCTTaGAAGATGAACCAGGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPASTGESKHMLTHVNLRSLVP*KMNQGY Trigger: GTAGCCCTGGTTCATCTTCAAAGGGACTAAAGAACG...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
||
| CDS-3UTR CAA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTGACACCTGTCCTCGGTaGCAGTATGTTGGAAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLERETSHQLSSLNGNTDTCPR*QYVGRR Trigger: CCGTCTTCCAACATACTGCAACCGAGGACAGGTGTC...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTCTGCCGGTAGCAGTGTaGGCATGTAGTATGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSLERETSHQLSSLNGNTLPVAV*ACSMAF Trigger: GAAAGCCATACTACATGCCAACACTGCTACCGGCAG...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGGTTTTTCCTGGTGCGTaGTCTCTTTTGCTTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: QNKNRLQQLRCLLQHQLEVFPGA*SLLLVG Trigger: TCCTACAAGCAAAAGAGACAACGCACCAGGAAAAAC...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGCATCTGTTCAAAATATaGGAAATGGCTGGCTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: NQSPQREVVLKSIWCTLQHLFKI*EMAGLE Trigger: TTCCAAGCCAGCCATTTCCAATATTTTGAACAGATG...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGTGGATTTCTGTAGTGTaGACTCGTAGGCTTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: NQSPQREVVLKSIWCTLQWISVV*TRRLEY Trigger: ATATTCAAGCCTACGAGTCAACACTACAGAAATCCA...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTTGGATTTCTGTAGTGTaGACTCGTAGGCTTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTWISVV*TRRLEY Trigger: ATATTCAAGCCTACGAGTCAACACTACAGAAATCCA...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTGAGCAGGATGAAAGCTaGGCAAAGCAACCAGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: YSLERETSHQLSSLNGNTEQDES*AKQPVH Trigger: ATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCTC...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTAGTCGGAACTTAACATaGCACTTTGGACAAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTSRNLT*HFGQDL Trigger: AAGATCTTGTCCAAAGTGCAATGTTAAGTTCCGACT...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACTGTGGTTGCAACTGTTaGAGGGCTAGTGGTGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYCGCNC*RASGGS Trigger: GCTACCACCACTAGCCCTCAAACAGTTGCAACCACA...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGCCGTACCTGGCTTACTaGCACTGGGCTTACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYICGQETSAFLVPIFLPYLAY*HWAYQL Trigger: CAACTGGTAAGCCCAGTGCAAGTAAGCCAGGTACGG...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGAGATCTATGCTGAATTaGTTTTTCCTGGTGCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NQSPQREVVLKSIWCTLQRSMLN*FFLVRC Trigger: ACAACGCACCAGGAAAAACAAATTCAGCATAGATCT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | AACCAAAGTCCTCAGAGGGAAGTTGTGCTCAAATCTATTTGGTGCACCTTGCAGATCGTCGTCTTTACTTaGACTTTCTTCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQSPQREVVLKSIWCTLQIVVFT*TFFYFL Trigger: CAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGAT...CTGCAAGGTGCACCAAATAGATTTGAGCACAACTTCCCTCTGAGGACTTTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCAGGTAGGAAGGGACTCTGCCTAAGAACTGATAAAATCCTAAGGCCACACACTATCGTCGTCTTTACTTaGACTTTCTTCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRKGLCLRTDKILRPHTIVVFT*TFFYFL Trigger: CAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGAT...AGTGTGTGGCCTTAGGATTTTATCAGTTCTTAGGCAGAGTCCCTTCCTACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGCATCTGTTCAAAATATaGGAAATGGCTGGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSPASTGESKHMLTHVNLHLFKI*EMAGLE Trigger: TTCCAAGCCAGCCATTTCCAATATTTTGAACAGATG...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | CAAAACAAGAATAGACTACAGCAACTAAGGTGCCTTCTCCAGCATCAACTGGAGAGATCTATGCTGAATTaGTTTTTCCTGGTGCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNKNRLQQLRCLLQHQLERSMLN*FFLVRC Trigger: ACAACGCACCAGGAAAAACAAATTCAGCATAGATCT...CTCCAGTTGATGCTGGAGAAGGCACCTTAGTTGCTGTAGTCTATTCTTGTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGGAGCAGGATGAAAGCTaGGCAAAGCAACCAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYICGQETSAFLVPIFLEQDES*AKQPVH Trigger: ATGCACTGGTTGCTTTGCCAAGCTTTCATCCTGCTC...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | CCTTCTCCAGCATCAACTGGAGAATCAAAGCACATGCTAACACATGTTAACCTGATGAGGTATTCACATTaGATAGTACAGTTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPASTGESKHMLTHVNLMRYSH*IVQFGK Trigger: CTTCCCAAACTGTACTATCAAATGTGAATACCTCAT...CAGGTTAACATGTGTTAGCATGTGCTTTGATTCTCCAGTTGATGCTGGAGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGGTTTTTCCTGGTGCGTaGTCTCTTTTGCTTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLYICGQETSAFLVPIFLVFPGA*SLLLVG Trigger: TCCTACAAGCAAAAGAGACAACGCACCAGGAAAAAC...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TATTCCTTGGAAAGAGAGACTAGTCATCAGTTGTCTTCATTGAATGGGAACACTATGAGGTATTCACATTaGATAGTACAGTTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YSLERETSHQLSSLNGNTMRYSH*IVQFGK Trigger: CTTCCCAAACTGTACTATCAAATGTGAATACCTCAT...AGTGTTCCCATTCAATGAAGACAACTGATGACTAGTCTCTCTTTCCAAGGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACAGATCTATGCTGAATTaGTTTTTCCTGGTGCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYRSMLN*FFLVRC Trigger: ACAACGCACCAGGAAAAACAAATTCAGCATAGATCT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACATCGTCGTCTTTACTTaGACTTTCTTCTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYIVVFT*TFFYFL Trigger: CAGAAAGTAGAAGAAAGTCAAAGTAAAGACGACGAT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGCATCTGTTCAAAATATaGGAAATGGCTGGCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLYICGQETSAFLVPIFLHLFKI*EMAGLE Trigger: TTCCAAGCCAGCCATTTCCAATATTTTGAACAGATG...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | TCTCTCTATATATGTGGGCAAGAAACAAGTGCATTTTTGGTCCCAATATTTTTGTGGATTTCTGTAGTGTaGACTCGTAGGCTTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYICGQETSAFLVPIFLWISVV*TRRLEY Trigger: ATATTCAAGCCTACGAGTCAACACTACAGAAATCCA...CAAAAATATTGGGACCAAAAATGCACTTGTTTCTTGCCCACATATATAGAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACATGAGGTATTCACATTaGATAGTACAGTTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYMRYSH*IVQFGK Trigger: CTTCCCAAACTGTACTATCAAATGTGAATACCTCAT...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS-3UTR CAA 90 bp | ACAGACAAAACAGCAGCTATACCATTTGACACAAAATATTCAGAAGGCAAGTACTGTTCTGTTTTCTCCTaGGAGGTCAAAAATTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDKTAAIPFDTKYSEGKYCSVFS*EVKNCS Trigger: ACTACAATTTTTGACCTCCAAGGAGAAAACAGAACA...GTACTTGCCTTCTGAATATTTTGTGTCAAATGGTATAGCTGCTGTTTTGTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS CCA 72 bp | GTCCTCGGTTGCAGTATGTTGGAAGACGGTATATCTTaGGTCGAGTCTGACTGTGAGACCGAACAAGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: VLGCSMLEDGIS*VESDCETEQAP Trigger: CGGTGCTTGTTCGGTCTCACAGTCAGACTCGACCCAAGATATACCGTCTTCCAACATACTGCAACCGAGGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | CTTGCACTGGGCTTACCAGTTGTGGTTGCAACTGTTTaGGGGCTAGTGGTGGTAGCTTTATTTGCAGATACT | + |
|
Preference number: 6 (lower is better) Translates to: LALGLPVVVATV*GLVVVALFADT Trigger: AGTATCTGCAAATAAAGCTACCACCACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCAGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS CCA 72 bp | TCTGACTGTGAGACCGAACAAGCACCGGAATCCTCTTaGGGTGAAGTCTTGGTAAAGTCAAGTTTAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: SDCETEQAPESS*GEVLVKSSLDT Trigger: TGTGTCTAAACTTGACTTTACCAAGACTTCACCCCAAGAGGATTCCGGTGCTTGTTCGGTCTCACAGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS CAA 72 bp | ATCCAGGTGCAGACTGAACTGATGAGGTATTCACATTaGATAGTACAGTTTGGGAAGAAGCCCCTGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IQVQTELMRYSH*IVQFGKKPLKA Trigger: CGCCTTCAGGGGCTTCTTCCCAAACTGTACTATCAAATGTGAATACCTCATCAGTTCAGTCTGCACCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS CAA 72 bp | ACTTGCACTGGGCTTACCAGTTGTGGTTGCAACTGTTaGAGGGCTAGTGGTGGTAGCTTTATTTGCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: TCTGLTSCGCNC*RASGGSFICRY Trigger: GTATCTGCAAATAAAGCTACCACCACTAGCCCTCAAACAGTTGCAACCACAACTGGTAAGCCCAGTGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | AGGATGAAAGCTTGGCAAAGCAACCAGTGCATTCGATaGTGGATTTCTGTAGTGTTGACTCGTAGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RMKAWQSNQCIR*WISVVLTRRLE Trigger: TTCAAGCCTACGAGTCAACACTACAGAAATCCATCATCGAATGCACTGGTTGCTTTGCCAAGCTTTCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | TTAGTAGTTGTACTTTTAGACTTTGGAACTGAGAGCTaGAGAGAAGTGCTTGGGATGGTACTAGAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVVVLLDFGTES*REVLGMVLEGG Trigger: CCCACCTTCTAGTACCATCCCAAGCACTTCTCTTCAGCTCTCAGTTCCAAAGTCTAAAAGTACAACTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | TTCCCTGGTGACACCTTAAGTTCTTCAGATCTATGCTaGATTTGTTTTTCCTGGTGCGTTGTCTCTTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FPGDTLSSSDLC*ICFSWCVVSFA Trigger: AGCAAAAGAGACAACGCACCAGGAAAAACAAATTCAGCATAGATCTGAAGAACTTAAGGTGTCACCAGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | GGACAAGATCTTAGTGAAGATGATCCAGGTGCAGACTaGACTGATGAGGTATTCACATTTGATAGTACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GQDLSEDDPGAD*TDEVFTFDSTV Trigger: AACTGTACTATCAAATGTGAATACCTCATCAGTTCAGTCTGCACCTGGATCATCTTCACTAAGATCTTGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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| CDS TCA 72 bp | GTTATTCTTAGTAGTTGTACTTTTAGACTTTGGAACTaGGAGCTGAAGAGAAGTGCTTGGGATGGTACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VILSSCTFRLWN*ELKRSAWDGTR Trigger: TCTAGTACCATCCCAAGCACTTCTCTTCAGCTCTCAGTTCCAAAGTCTAAAAGTACAACTACTAAGAATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072292.12 ENSMUST00000076635.13 ENSMUST00000088898.11 ENSMUST00000114940.9 |
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