Pregenerated sensors for ZFP280B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049764Ensembl transcript IDs: ENSMUST00000061617.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATATACCCAGACGCCTGGAGGGATGGGCAGCGGCAGCTGGTCACCTaGGCTGGAGGACAACAGGTAGCCCCGGCCAGGCTCAAGGACACA | + |
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Preference number: 1 (lower is better) Translates to: IYPDAWRDGQRQLVT*AGGQQVAPARLKDT Trigger: TGTGTCCTTGAGCCTGGCCGGGGCTACCTGTTGTCCTCCAGCCCAGGTGACCAGCTGCCGCTGCCCATCCCTCCAGGCGTCTGGGTATAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CCA 90 bp | CGGAGCAAACAAAAGATACTCACAACCTCTGTCCCTCCCTCAGTCTaGAGAGACCAAGGCCTGGGGATAACCTCTTCCCATTTGTTCATG | + |
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Preference number: 1 (lower is better) Translates to: RSKQKILTTSVPPSV*RDQGLGITSSHLFM Trigger: CATGAACAAATGGGAAGAGGTTATCCCCAGGCCTTGGTCTCTCCAGACTGAGGGAGGGACAGAGGTTGTGAGTATCTTTTGTTTGCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 90 bp | CAAGTATTAACTGCCCGCAGATCTTCAGGGAGAGGTGGGGCCTTGTaGGCCTGCCCACCAAACGTCAAACCTTTAAAGAACTCTCAAACT | + |
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Preference number: 1 (lower is better) Translates to: QVLTARRSSGRGGAL*ACPPNVKPLKNSQT Trigger: AGTTTGAGAGTTCTTTAAAGGTTTGACGTTTGGTGGGCAGGCTCACAAGGCCCCACCTCTCCCTGAAGATCTGCGGGCAGTTAATACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 90 bp | CTCAGGAAAGGTCAACTTGCTTTACTGATGTGGTCCATGAGGATATaGCCAGTTCTTCAAACAGAGCGAGCCAAAACGGACCAGCGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LRKGQLALLMWSMRI*PVLQTERAKTDQRG Trigger: TCCACGCTGGTCCGTTTTGGCTCGCTCTGTTTGAAGAACTGGTCATATCCTCATGGACCACATCAGTAAAGCAAGTTGACCTTTCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR GCA 90 bp | AAATCTTCCTGCCCCAGCCTCCCAAGAGCTCTTATTACCAGTGTGTaGTACCACACCCAACAAGATACCTTTAAAGAAAGGAACAGGACC | + |
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Preference number: 1 (lower is better) Translates to: KSSCPSLPRALITSV*YHTQQDTFKERNRT Trigger: GGTCCTGTTCCTTTCTTTAAAGGTATCTTGTTGGGTGTGGTAGCACACACTGGTAATAAGAGCTCTTGGGAGGCTGGGGCAGGAAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 90 bp | GGTGGGAGAGGTTGGAGGATGGATATGGAATGGAGGGGTGGGAGATaGGTAGGAATGGAGTTCATACAGTGTGAAATTAACAATCAACAG | + |
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Preference number: 1 (lower is better) Translates to: GGRGWRMDMEWRGGR*VGMEFIQCEINNQQ Trigger: CTGTTGATTGTTAATTTCACACTGTATGAACTCCATTCCTACTCATCTCCCACCCCTCCATTCCATATCCATCCTCCAACCTCTCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR GCA 90 bp | TCAAACCGCAAATGCCGGGGCTTCTTTCCTCAGGAAAGGTCAACTTaGTTTACTGATGTGGTCCATGAGGATATGACCAGTTCTTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: SNRKCRGFFPQERST*FTDVVHEDMTSSSN Trigger: GTTTGAAGAACTGGTCATATCCTCATGGACCACATCAGTAAAGCAAGTTGACCTTTCCTGAGGAAAGAAGCCCCGGCATTTGCGGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 90 bp | TTAGGTAAAGGCATTCAGGCAGGATTCCTTCTTTGGCTTCAAGACTaGAAAGGACGTATGCCTGCCCACTTACCCATGCTATACCACTTA | + |
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Preference number: 1 (lower is better) Translates to: LGKGIQAGFLLWLQD*KGRMPAHLPMLYHL Trigger: TAAGTGGTATAGCATGGGTAAGTGGGCAGGCATACGTCCTTTTCAGTCTTGAAGCCAAAGAAGGAATCCTGCCTGAATGCCTTTACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR GCA 90 bp | GGCAGGATTCCTTCTTTGGCTTCAAGACTGAAAAGGACGTATGCCTaGCCACTTACCCATGCTATACCACTTAAGATGATGTCTCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: GRIPSLASRLKRTYA*PLTHAIPLKMMSLK Trigger: TTTGAGAGACATCATCTTAAGTGGTATAGCATGGGTAAGTGGGCAGGCATACGTCCTTTTCAGTCTTGAAGCCAAAGAAGGAATCCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 90 bp | CTTGCACACAAAAGTGCTTCAAGTAAGACCCAAGCAGTATTAGTGTaGTCAACTAGGAAATTACACATCCAACAAAGGGAACTTATACAG | + |
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Preference number: 1 (lower is better) Translates to: LAHKSASSKTQAVLV*STRKLHIQQRELIQ Trigger: CTGTATAAGTTCCCTTTGTTGGATGTGTAATTTCCTAGTTGATCACACTAATACTGCTTGGGTCTTACTTGAAGCACTTTTGTGTGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCACCTGGGCTGGAGGACAACAGGTAGCCCCGGCCAGGCTCAAGGACACAGCAGAGGTGGGGCCTTGTaGGCCTGCCCACCAAACGTC | + |
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Preference number: 2 (lower is better) Translates to: GHLGWRTTGSPGQAQGHSRGGAL*ACPPNV Trigger: GACGTTTGGTGGGCAGGCTCACAAGGCCCCACCTCT...GCTGTGTCCTTGAGCCTGGCCGGGGCTACCTGTTGTCCTCCAGCCCAGGTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTCAAAACAGTGCAGCAGCAGTGGACAGGTCAGGTTGGGTCGGGCAGCGCACCAGGGCATCAAATTaGAAGCTTCACACACTCAAC | + |
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Preference number: 2 (lower is better) Translates to: GGQNSAAAVDRSGWVGQRTRASN*KLHTLN Trigger: GTTGAGTGTGTGAAGCTTGCAATTTGATGCCCTGGT...GCGCTGCCCGACCCAACCTGACCTGTCCACTGCTGCTGCACTGTTTTGACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCACCTGGGCTGGAGGACAACAGGTAGCCCCGGCCAGGCTCAAGGACACAGCCAAGCAGTATTAGTGTaGTCAACTAGGAAATTACAC | + |
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Preference number: 2 (lower is better) Translates to: GHLGWRTTGSPGQAQGHSQAVLV*STRKLH Trigger: GTGTAATTTCCTAGTTGATCACACTAATACTGCTTG...GCTGTGTCCTTGAGCCTGGCCGGGGCTACCTGTTGTCCTCCAGCCCAGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | AGGACAACAGGTAGCCCCGGCCAGGCTCAAGGACACAGCCCTAGAGATGTACAGGCCCAAGTCATAAACTaGACAGATGCCATTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RTTGSPGQAQGHSPRDVQAQVIN*TDAIFP Trigger: TGGGAAAATGGCATCTGTCCAGTTTATGACTTGGGC...CTGTACATCTCTAGGGCTGTGTCCTTGAGCCTGGCCGGGGCTACCTGTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CAA 90 bp | CCGTTGCTGCTGCTTCATGTGGCGCTGAGAATACAGAGCTGTGCTTaGAATGTTTGCAGGGGTCTTTCACAGACACGGGCGTTTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: PLLLLHVALRIQSCA*NVCRGLSQTRAFYR Trigger: CCTGTAAAACGCCCGTGTCTGTGAAAGACCCCTGCAAACATTCAAAGCACAGCTCTGTATTCTCAGCGCCACATGAAGCAGCAGCAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGCTTAGGGAAAGCGCTGTGACAGCAGCCCAGGCAGCCTCTGCACCAGGGAATATGAAAACCAGATaGATTTCAAATGGCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: CRLRESAVTAAQAASAPGNMKTR*ISNGTH Trigger: GTGAGTGCCATTTGAAATCCATCTGGTTTTCATATT...CCCTGGTGCAGAGGCTGCCTGGGCTGCTGTCACAGCGCTTTCCCTAAGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAAGACGCCTGGAGGGATaGGCAGCGGCAGCTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKERRLEG*AAAAGH Trigger: GTGACCAGCTGCCGCTGCCCATCCCTCCAGGCGTCT...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGCTCAAGGACACAGCCCTAGAGATGTACAGAAAGAGCTAGCGCTCCTGTTTACAGGAATGGCTTaGCCTCCTTGGATACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GQAQGHSPRDVQKELALLFTGMA*PPWILF Trigger: AAAGAGTATCCAAGGAGGCCAAGCCATTCCTGTAAA...CAGGAGCGCTAGCTCTTTCTGTACATCTCTAGGGCTGTGTCCTTGAGCCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | AATGGTCAAGCACGGAGCAAACAAAAGATACTCACAACCTCTGTCCCTCCCTCAGGCGTTTTACAGGAATaGCTTGGCCTCCTTGGATAC | + |
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Preference number: 2 (lower is better) Translates to: NGQARSKQKILTTSVPPSGVLQE*LGLLGY Trigger: GTATCCAAGGAGGCCAAGCCATTCCTGTAAAACGCC...TGAGGGAGGGACAGAGGTTGTGAGTATCTTTTGTTTGCTCCGTGCTTGACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATGGAATCTAGGGAAATTTCACTAAACCGAGGAAGGGAAAAATGGAACATCTTCAGGGAGAGGTaGGGCCTTGTGAGCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LFMESREISLNRGREKWNIFRER*GLVSLP Trigger: GGGCAGGCTCACAAGGCCCCACCTCTCCCTGAAGAT...GTTCCATTTTTCCCTTCCTCGGTTTAGTGAAATTTCCCTAGATTCCATGAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCGGCAGCTGGTCACCTaGGCTGGAGGACAACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LQTYFINGIFHQNKWDKYRQLVT*AGGQQV Trigger: TACCTGTTGTCCTCCAGCCCAGGTGACCAGCTGCCG...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCAGGGCTGGAGACACTCGACACAGGTCTAAGACAGTTCTTAAGTTTACTGGAGGGGTGAGCACTTaGTTATTATTTGTGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TGRAGDTRHRSKTVLKFTGGVST*LLFVKP Trigger: AGGCTTCACAAATAATAAGCAAGTGCTCACCCCTCC...AGTAAACTTAAGAACTGTCTTAGACCTGTGTCGAGTGTCTCCAGCCCTGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTACTAGCCACCCTGCTCTaGTTTCCACGCTATGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HKRDFSPEQVGQIPFPYLLATLL*FPRYVQ Trigger: CTGGACATAGCGTGGAAACCAGAGCAGGGTGGCTAG...TAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCAGGGCTGGAGACACTCGACACAGGTCTAAGACAGTTCTTAAGTTTACTACTCAACCACACACGTaGACTGAAAAACAAAGACCA | + |
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Preference number: 2 (lower is better) Translates to: TGRAGDTRHRSKTVLKFTTQPHT*TEKQRP Trigger: TGGTCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGT...AGTAAACTTAAGAACTGTCTTAGACCTGTGTCGAGTGTCTCCAGCCCTGCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAACCACACACGTGGACTaGAAAACAAAGACCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKETTHVD*KTKTTE Trigger: CTCTGTGGTCTTTGTTTTTCAGTCCACGTGTGTGGT...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAAACTTTAAATCTTCCTaGCCCAGCCTCCCAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKENFKSS*PSLPRA Trigger: AGCTCTTGGGAGGCTGGGGCAGGAAGATTTAAAGTT...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAAGCGCCAGCACTAAATaGGAACAAAAGAAACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKESASTK*EQKKPS Trigger: TGAGGGTTTCTTTTGTTCTCATTTAGTGCTGGCGCT...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCTTTGGCTTCAAGACTaGAAAGGACGTATGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LQTYFINGIFHQNKWDKYLWLQD*KGRMPA Trigger: GGCAGGCATACGTCCTTTTCAGTCTTGAAGCCAAAG...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR TCA 90 bp | ACACTCAACCACACACGTGGACTGAAAAACAAAGACCACAGAGAGGGTTTAAATTACAGAGCTGTGCTTTaGATGTTTGCAGGGGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TLNHTRGLKNKDHREGLNYRAVL*MFAGVF Trigger: AAAGACCCCTGCAAACATTCAAAGCACAGCTCTGTA...ATTTAAACCCTCTCTGTGGTCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAGTTTCCTGTGTAATTTaGAACTCACTGAAGAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKEVSCVI*NSLKSP Trigger: TGGGCTCTTCAGTGAGTTCCAAATTACACAGGAAAC...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCATGGAATCTAGGGAAATTTCACTAAACCGAGGAAGGGAAAAATGGAACGAGAATACAGAGCTGTaGTTTGAATGTTTGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LFMESREISLNRGREKWNENTEL*FECLQG Trigger: CCCCTGCAAACATTCAAAGCACAGCTCTGTATTCTC...GTTCCATTTTTCCCTTCCTCGGTTTAGTGAAATTTCCCTAGATTCCATGAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAACAGATGGATTTCAAATaGCACTCACAGTTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: RDFSPEQVGQIPFPYLKEQMDFK*HSQFIQ Trigger: CTGAATGAACTGTGAGTGCCATTTGAAATCCATCTG...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CAA 90 bp | TTTCCACGCTATGTCCAGTATTATTGGGCAAGTTCTTATTACAGCTaGAGAGTAGAACTAAGTTCAGCCCAAGTCATAAACTGGACAGAT | + |
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Preference number: 2 (lower is better) Translates to: FPRYVQYYWASSYYS*RVELSSAQVINWTD Trigger: ATCTGTCCAGTTTATGACTTGGGCTGAACTTAGTTCTACTCTCAAGCTGTAATAAGAACTTGCCCAATAATACTGGACATAGCGTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACGGAACTTATCCACACTaGCTCTTTTGTTTCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LQTYFINGIFHQNKWDKYGTYPH*LFCFLC Trigger: ACACAGGAAACAAAAGAGGCAGTGTGGATAAGTTCC...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCTTCCCATTTGTTCATaGAATCTAGGGAAATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LQTYFINGIFHQNKWDKYLPICS*NLGKFH Trigger: GTGAAATTTCCCTAGATTCCATGAACAAATGGGAAG...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGCAACATCAAAATAACTTTCATTTGGTAAATCAAGCAGCCAACTTCACAAAACAGACAAAACCCTaGATTATCACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: LWQHQNNFHLVNQAANFTKQTKP*IITHTH Trigger: GTGTGTGTGTGTGATAATGCAGGGTTTTGTCTGTTT...TGTGAAGTTGGCTGCTTGATTTACCAAATGAAAGTTATTTTGATGTTGCCAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGCAACATCAAAATAACTTTCATTTGGTAAATCAAGCAGCCAACTTCACACATAAACTGGACAGATaGCATTTTCCCAAACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LWQHQNNFHLVNQAANFTHKLDR*HFPKPF Trigger: AAAAGGTTTGGGAAAATGGCATCTGTCCAGTTTATG...TGTGAAGTTGGCTGCTTGATTTACCAAATGAAAGTTATTTTGATGTTGCCAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CCA 72 bp | GACGCCTGGAGGGATGGGCAGCGGCAGCTGGTCACCTaGGCTGGAGGACAACAGGTAGCCCCGGCCAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: DAWRDGQRQLVT*AGGQQVAPARL Trigger: GAGCCTGGCCGGGGCTACCTGTTGTCCTCCAGCCCAGGTGACCAGCTGCCGCTGCCCATCCCTCCAGGCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CCA 72 bp | GTCTCTAACCAGCATATACCCAGACGCCTGGAGGGATaGGCAGCGGCAGCTGGTCACCTGGGCTGGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: VSNQHIPRRLEG*AAAAGHLGWRT Trigger: TGTCCTCCAGCCCAGGTGACCAGCTGCCGCTGCCCATCCCTCCAGGCGTCTGGGTATATGCTGGTTAGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CCA 72 bp | GCAAGTATTAACTGCCCGCAGATCTTCAGGGAGAGGTaGGGCCTTGTGAGCCTGCCCACCAAACGTCAAACC | + |
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Preference number: 3 (lower is better) Translates to: ASINCPQIFRER*GLVSLPTKRQT Trigger: GGTTTGACGTTTGGTGGGCAGGCTCACAAGGCCCCACCTCTCCCTGAAGATCTGCGGGCAGTTAATACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR GCA 72 bp | AACAATGTCTCTCTCCCTCCCTTCGCAAGTATTAACTaGCCGCAGATCTTCAGGGAGAGGTGGGGCCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: NNVSLPPFASIN*PQIFRERWGLV Trigger: CACAAGGCCCCACCTCTCCCTGAAGATCTGCGGGCAGTTAATACTTGCGAAGGGAGGGAGAGAGACATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR CCA 72 bp | CAAAAGATACTCACAACCTCTGTCCCTCCCTCAGTCTaGAGAGACCAAGGCCTGGGGATAACCTCTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: QKILTTSVPPSV*RDQGLGITSSH Trigger: ATGGGAAGAGGTTATCCCCAGGCCTTGGTCTCTCCAGACTGAGGGAGGGACAGAGGTTGTGAGTATCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR GCA 72 bp | GCTGCTGCTTCATGTGGCGCTGAGAATACAGAGCTGTaGTTTGAATGTTTGCAGGGGTCTTTCACAGACACG | + |
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Preference number: 3 (lower is better) Translates to: AAASCGAENTEL*FECLQGSFTDT Trigger: CGTGTCTGTGAAAGACCCCTGCAAACATTCAAAGCACAGCTCTGTATTCTCAGCGCCACATGAAGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 72 bp | GGCATTCAGGCAGGATTCCTTCTTTGGCTTCAAGACTaGAAAGGACGTATGCCTGCCCACTTACCCATGCTA | + |
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Preference number: 3 (lower is better) Translates to: GIQAGFLLWLQD*KGRMPAHLPML Trigger: TAGCATGGGTAAGTGGGCAGGCATACGTCCTTTTCAGTCTTGAAGCCAAAGAAGGAATCCTGCCTGAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR-3UTR CAA 90 bp | CATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAGCGCTCCTGAAGCTGTaGAAGACCAATCCTCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HKRDFSPEQVGQIPFPYLALLKL*KTNPQR Trigger: CCTCTGAGGATTGGTCTTCAACAGCTTCAGGAGCGC...TAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| 3UTR TCA 72 bp | CACTCTAAAAATCTTAGTAAGCTTCATAACCACGAGTaGGGTAGCAGCCATGCAGGCTTAGGGAAAGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: HSKNLSKLHNHE*GSSHAGLGKAL Trigger: CAGCGCTTTCCCTAAGCCTGCATGGCTGCTACCTCACTCGTGGTTATGAAGCTTACTAAGATTTTTAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR-3UTR CAA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAAGGGAGGGGTGAGCACTaGCTTATTATTTGTGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RDFSPEQVGQIPFPYLKEGRGEH*LIICEA Trigger: GGCTTCACAAATAATAAGCAAGTGCTCACCCCTCCC...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CCA 72 bp | ACCAACCCCAAAATGTATCTGACCTGTATACATGTGTaGTGGCACAGATACACCCACACACAAGTCATACAC | + |
|
Preference number: 3 (lower is better) Translates to: TNPKMYLTCIHV*WHRYTHTQVIH Trigger: GTGTATGACTTGTGTGTGGGTGTATCTGTGCCACCACACATGTATACAGGTCAGATACATTTTGGGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR GCA 72 bp | GTTATAACTCAAGTTCAATATACTTCAAACCGCAAATaGCGGGGCTTCTTTCCTCAGGAAAGGTCAACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VITQVQYTSNRK*RGFFPQERSTC Trigger: GCAAGTTGACCTTTCCTGAGGAAAGAAGCCCCGGCATTTGCGGTTTGAAGTATATTGAACTTGAGTTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCATGGAATCTAGGGAAATTTCACTAAACCGAGGAAGGGAAAAATGGAACGGCAGGATTCCTTCTTaGGCTTCAAGACTGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFMESREISLNRGREKWNGRIPS*ASRLKR Trigger: CCTTTTCAGTCTTGAAGCCAAAGAAGGAATCCTGCC...GTTCCATTTTTCCCTTCCTCGGTTTAGTGAAATTTCCCTAGATTCCATGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR-3UTR CAA 90 bp | CATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTATTTTACAGGAATGGCTaGGCCTCCTTGGATACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HKRDFSPEQVGQIPFPYLFYRNG*ASLDTL Trigger: AAGAGTATCCAAGGAGGCCAAGCCATTCCTGTAAAA...TAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR TCA 72 bp | CAGACACCTTCCTCCTGTCAAGCCAAATACTTAATATaGAAACCAGATGGATTTCAAATGGCACTCACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QTPSSCQAKYLI*KPDGFQMALTV Trigger: AACTGTGAGTGCCATTTGAAATCCATCTGGTTTTCATATTAAGTATTTGGCTTGACAGGAGGAAGGTGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CCA 72 bp | TTGAGAGTAGAACTAAGTTCAGCCCAAGTCATAAACTaGACAGATGCCATTTTCCCAAACCTTTTCAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LRVELSSAQVIN*TDAIFPNLFSY Trigger: ATAACTGAAAAGGTTTGGGAAAATGGCATCTGTCCAGTTTATGACTTGGGCTGAACTTAGTTCTACTCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR TCA 72 bp | AAAAGTGCTTCAAGTAAGACCCAAGCAGTATTAGTGTaGTCAACTAGGAAATTACACATCCAACAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSASSKTQAVLV*STRKLHIQQRE Trigger: TTCCCTTTGTTGGATGTGTAATTTCCTAGTTGATCACACTAATACTGCTTGGGTCTTACTTGAAGCACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | GGGGGTCAAAACAGTGCAGCAGCAGTGGACAGGTCAGGTTGGGTCGGGCAGCGCGCCAATCCACTGTCCTaGCGAGGGTGGGCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQNSAAAVDRSGWVGQRANPLS*RGWAES Trigger: GGACTCTGCCCACCCTCGTCAGGACAGTGGATTGGC...GCGCTGCCCGACCCAACCTGACCTGTCCACTGCTGCTGCACTGTTTTGACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | GGGGGTCAAAACAGTGCAGCAGCAGTGGACAGGTCAGGTTGGGTCGGGCAGCGCCCTCGGCTGTGGTTCTaGATCTTGTTCGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGQNSAAAVDRSGWVGQRPRLWF*ILFVFI Trigger: GATGAAGACGAACAAGATCCAGAACCACAGCCGAGG...GCGCTGCCCGACCCAACCTGACCTGTCCACTGCTGCTGCACTGTTTTGACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CAA 72 bp | CTGCTTCATGTGGCGCTGAGAATACAGAGCTGTGCTTaGAATGTTTGCAGGGGTCTTTCACAGACACGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHVALRIQSCA*NVCRGLSQTRA Trigger: CGCCCGTGTCTGTGAAAGACCCCTGCAAACATTCAAAGCACAGCTCTGTATTCTCAGCGCCACATGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | CATGCTTTAGTGACACAGAAAACTACTGCGACAGGCAGGGCTGGAGACACTCGAGACGGCTCAGAGAGTTaGGAGCATCAAAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HALVTQKTTATGRAGDTRDGSES*EHQRKV Trigger: CACCTTCCTTTGATGCTCCCAACTCTCTGAGCCGTC...TCGAGTGTCTCCAGCCCTGCCTGTCGCAGTAGTTTTCTGTGTCACTAAAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCATCAATTCATCATCTTAGGTACCAGCGATTAACCGACGTACTACAGGCTGGCAGCGCAGACAGGTaGTGTGGCTCTCCCAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSSIHHLRYQRLTDVLQAGSADR*CGSPRR Trigger: ACGCCTGGGAGAGCCACACCACCTGTCTGCGCTGCC...AGCCTGTAGTACGTCGGTTAATCGCTGGTACCTAAGATGATGAATTGATGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | ACAGGCAGGGCTGGAGACACTCGACACAGGTCTAAGACAGTTCTTAAGTTTACTGGCTGGCTGGGAAGCTaGAGTCACCCCAACAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGRAGDTRHRSKTVLKFTGWLGS*SHPNKD Trigger: ATCTTTGTTGGGGTGACTTCAGCTTCCCAGCCAGCC...AGTAAACTTAAGAACTGTCTTAGACCTGTGTCGAGTGTCTCCAGCCCTGCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGCTCAAGGACACAGCCCTAGAGATGTACAGAAAGAGCTAGCGCTCCTGATGGTCAGGCCTCTGTaGATTTATGGAAAAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQAQGHSPRDVQKELALLMVRPL*IYGKMA Trigger: TGCCATTTTTCCATAAATCCACAGAGGCCTGACCAT...CAGGAGCGCTAGCTCTTTCTGTACATCTCTAGGGCTGTGTCCTTGAGCCTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAATGCACTCGGTCGATGTaGCACTCCAGCTGGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDFSPEQVGQIPFPYLKECTRSM*HSSWNG Trigger: CCCGTTCCAGCTGGAGTGCCACATCGACCGAGTGCA...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CAA 72 bp | AGAGATGTACAGAAAGAGCTAGCGCTCCTGAAGCTGTaGAAGACCAATCCTCAGAGGATGCTCTACGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDVQKELALLKL*KTNPQRMLYGS Trigger: AGAACCGTAGAGCATCCTCTGAGGATTGGTCTTCAACAGCTTCAGGAGCGCTAGCTCTTTCTGTACATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | ACACTCAACCACACACGTGGACTGAAAAACAAAGACCACAGAGAGGGTTTAAATTGTGAAAGTCTGCCTTaGGGTCGGGGGTTAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLNHTRGLKNKDHREGLNCESLP*GRGLEG Trigger: GCCTTCTAACCCCCGACCTCAAGGCAGACTTTCACA...ATTTAAACCCTCTCTGTGGTCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR GCA 90 bp | AATGGTCAAGCACGGAGCAAACAAAAGATACTCACAACCTCTGTCCCTCCCTCATACGAAGATCAGCTCTaGATCTTCAGCAGCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: NGQARSKQKILTTSVPPSYEDQL*IFSSIV Trigger: GACGATGCTGCTGAAGATGCAGAGCTGATCTTCGTA...TGAGGGAGGGACAGAGGTTGTGAGTATCTTTTGTTTGCTCCGTGCTTGACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | CATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAGAGGGCTGCAACCTCTaGGTCGTGGTTGCTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKRDFSPEQVGQIPFPYLEGCNL*VVVALS Trigger: ACTTAGAGCAACCACGACTCAGAGGTTGCAGCCCTC...TAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | AATGGTCAAGCACGGAGCAAACAAAAGATACTCACAACCTCTGTCCCTCCCTCAAGGCACAACCTGTGGTaGACTACTTCTATAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGQARSKQKILTTSVPPSRHNLW*TTSIIR Trigger: TCTGATTATAGAAGTAGTTCACCACAGGTTGTGCCT...TGAGGGAGGGACAGAGGTTGTGAGTATCTTTTGTTTGCTCCGTGCTTGACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CAA 72 bp | TGGAGAGACCAAGGCCTGGGGATAACCTCTTCCCATTaGTTCATGGAATCTAGGGAAATTTCACTAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: WRDQGLGITSSH*FMESREISLNR Trigger: TCGGTTTAGTGAAATTTCCCTAGATTCCATGAACAAATGGGAAGAGGTTATCCCCAGGCCTTGGTCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCATCAATTCATCATCTTAGGTACCAGCGATTAACCGACGTACTACAGGCTTTGACTTGCTGGACTTaGAAAGTCTGCTTCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSIHHLRYQRLTDVLQALTCWT*KVCFRQ Trigger: TTGGCGGAAGCAGACTTTTCAAGTCCAGCAAGTCAA...AGCCTGTAGTACGTCGGTTAATCGCTGGTACCTAAGATGATGAATTGATGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CAA 72 bp | AGGCAGGAGAAGGCAAGTCTTCATTTAGGACATATCTaGCACACAAAAGTGCTTCAAGTAAGACCCAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQEKASLHLGHI*HTKVLQVRPKQ Trigger: CTGCTTGGGTCTTACTTGAAGCACTTTTGTGTGCAAGATATGTCCTAAATGAAGACTTGCCTTCTCCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACATCTCCCCAGGCTTGTaGTTGTCTTTCATGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQTYFINGIFHQNKWDKYISPGL*LSFMCC Trigger: ACAGCACATGAAAGACAATCACAAGCCTGGGGAGAT...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCAACATCAAAATAACTTTCATTTGGTAAATCAAGCAGCCAACTTCACACAGTTGTGCTCACAGTaGTCGATGCTACCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQHQNNFHLVNQAANFTQLCSQ*SMLPSQ Trigger: CTGTGAAGGTAGCATCGATCACTGTGAGCACAACTG...TGTGAAGTTGGCTGCTTGATTTACCAAATGAAAGTTATTTTGATGTTGCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCATCAATTCATCATCTTAGGTACCAGCGATTAACCGACGTACTACAGGCTACAATCTCAATACTATaGTCAGGCCTCTGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSIHHLRYQRLTDVLQATISIL*SGLCGF Trigger: AAATCCACAGAGGCCTGACCATAGTATTGAGATTGT...AGCCTGTAGTACGTCGGTTAATCGCTGGTACCTAAGATGATGAATTGATGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | CATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAGCCTCTGTGGATTTATaGAAAAATGGCACTTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HKRDFSPEQVGQIPFPYLASVDL*KNGTSI Trigger: TATCGAAGTGCCATTTTTCCATAAATCCACAGAGGC...TAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGCTCTTATTACCAGTGTGTGCTACCACACCCAACAAGATACCTTTAAATCAAACTTCCTTTCTTaGGATCAAAAGTCTCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRALITSVCYHTQQDTFKSNFLS*DQKSLD Trigger: GTCAAGAGACTTTTGATCCCAAGAAAGGAAGTTTGA...TTTAAAGGTATCTTGTTGGGTGTGGTAGCACACACTGGTAATAAGAGCTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR TCA 90 bp | CTTTGGCAACATCAAAATAACTTTCATTTGGTAAATCAAGCAGCCAACTTCACAGGATCAAAAGTCTCTTaGCTTGCTGGACTTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQHQNNFHLVNQAANFTGSKVS*LAGLEK Trigger: CTTTTCAAGTCCAGCAAGTCAAGAGACTTTTGATCC...TGTGAAGTTGGCTGCTTGATTTACCAAATGAAAGTTATTTTGATGTTGCCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CCA 90 bp | ATCAAATTGCAAGCTTCACACACTCAACCACACACGTGGACTGAAAAACAAAGATTCTTAGTGTTTACATaGCACTTTGTAAAGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLQASHTQPHTWTEKQRFLVFT*HFVKCV Trigger: GACACACTTTACAAAGTGCCATGTAAACACTAAGAA...TCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGTGTGTGAAGCTTGCAATTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| 3UTR CAA 72 bp | TATGTCCAGTATTATTGGGCAAGTTCTTATTACAGCTaGAGAGTAGAACTAAGTTCAGCCCAAGTCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YVQYYWASSYYS*RVELSSAQVIN Trigger: GTTTATGACTTGGGCTGAACTTAGTTCTACTCTCAAGCTGTAATAAGAACTTGCCCAATAATACTGGACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | GGGGGTCAAAACAGTGCAGCAGCAGTGGACAGGTCAGGTTGGGTCGGGCAGCGCAGACGGCTCAGAGAGTaGGGAGCATCAAAGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGQNSAAAVDRSGWVGQRRRLRE*GASKEG Trigger: ACCTTCCTTTGATGCTCCCAACTCTCTGAGCCGTCT...GCGCTGCCCGACCCAACCTGACCTGTCCACTGCTGCTGCACTGTTTTGACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS CCA 90 bp | GATGCTACCTTCACAGATTCTGACTCCACGGGCTGCAGGGACACCTaGATCACGACCTTCGTCTCGGGAGGCAGCCCTTCCAGCTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DATFTDSDSTGCRDT*ITTFVSGGSPSSCL Trigger: TAAGCAGCTGGAAGGGCTGCCTCCCGAGACGAAGGTCGTGATCCAGGTGTCCCTGCAGCCCGTGGAGTCAGAATCTGTGAAGGTAGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | ACACAAAGTGTGACTAGGGATCTGGTTCAATGGCAGAGCCCTCGCTCGGGTTTAAGAGGCGAACAGCACTaGGAAGAGCTACTAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TQSVTRDLVQWQSPRSGLRGEQH*EELLGT Trigger: TGTGCCTAGTAGCTCTTCCAAGTGCTGTTCGCCTCT...TAAACCCGAGCGAGGGCTCTGCCATTGAACCAGATCCCTAGTCACACTTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | ACACAAAGTGTGACTAGGGATCTGGTTCAATGGCAGAGCCCTCGCTCGGGTTTAGACAACTCACAGATTTaGCAGACCACGGAAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQSVTRDLVQWQSPRSGLDNSQI*QTTEGS Trigger: GGACCCTTCCGTGGTCTGCAAAATCTGTGAGTTGTC...TAAACCCGAGCGAGGGCTCTGCCATTGAACCAGATCCCTAGTCACACTTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS CCA 90 bp | TTGGGAGCATCAAAGGAAGGTGTCCTCTGTTGCATATTCGAGGTATaGAAGGTACCTGAAGGGGGCAAAGCTGAAGAAAGTGGTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LGASKEGVLCCIFEV*KVPEGGKAEESGST Trigger: TGTAGAACCACTTTCTTCAGCTTTGCCCCCTTCAGGTACCTTCCATACCTCGAATATGCAACAGAGGACACCTTCCTTTGATGCTCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS TCA 90 bp | CAGAGGCGAACAGCACTTGGAAGAGCTACTAGGCACAACCTGTGGTaGACTACTTCTATAATCAGACTCGGACAAAGGCTCAATAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRRTALGRATRHNLW*TTSIIRLGQRLNSN Trigger: ATTGCTATTGAGCCTTTGTCCGAGTCTGATTATAGAAGTAGTTCACCACAGGTTGTGCCTAGTAGCTCTTCCAAGTGCTGTTCGCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | CTTCACACACTCAACCACACACGTGGACTGAAAAACAAAGACCACAGAGAGGGTAGGCTTCTTAAACATTaGGTGGCACTGAGTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLNHTRGLKNKDHREGRLLKH*VALSLV Trigger: CACAAGACTCAGTGCCACCAAATGTTTAAGAAGCCT...ACCCTCTCTGTGGTCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGTGTGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | ACACTCAACCACACACGTGGACTGAAAAACAAAGACCACAGAGAGGGTTTAAATCTGTGGTTCTGGATCTaGTTCGTCTTCATCATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TLNHTRGLKNKDHREGLNLWFWI*FVFIIY Trigger: GTAGATGATGAAGACGAACAAGATCCAGAACCACAG...ATTTAAACCCTCTCTGTGGTCTTTGTTTTTCAGTCCACGTGTGTGGTTGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | CTGCAGACTTATTTCATAAACGGGATTTTTCACCAGAACAAGTGGGACAAATACCTTGACTTGCTGGACTaGAAAAGTCTGCTTCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQTYFINGIFHQNKWDKYLDLLD*KSLLPP Trigger: TGGCGGAAGCAGACTTTTCAAGTCCAGCAAGTCAAG...GTATTTGTCCCACTTGTTCTGGTGAAAAATCCCGTTTATGAAATAAGTCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS-3UTR CAA 90 bp | CGGGATTTTTCACCAGAACAAGTGGGACAAATACCCTTTCCATACCTAAAGGAACAAAAGTCTCTTGACTaGCTGGACTTGAAAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDFSPEQVGQIPFPYLKEQKSLD*LDLKSL Trigger: CAGACTTTTCAAGTCCAGCAAGTCAAGAGACTTTTG...TTCCTTTAGGTATGGAAAGGGTATTTGTCCCACTTGTTCTGGTGAAAAATCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS CCA 72 bp | CTGGAGATGCTGGCAAGACAACCACGGCCTCTGATGTaGGGGCGGCAGGACGTGAGGGCTGCAACCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LEMLARQPRPLM*GRQDVRAATSE Trigger: CTCAGAGGTTGCAGCCCTCACGTCCTGCCGCCCCCACATCAGAGGCCGTGGTTGTCTTGCCAGCATCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS CCA 72 bp | TTCACAGATTCTGACTCCACGGGCTGCAGGGACACCTaGATCACGACCTTCGTCTCGGGAGGCAGCCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FTDSDSTGCRDT*ITTFVSGGSPS Trigger: GGAAGGGCTGCCTCCCGAGACGAAGGTCGTGATCCAGGTGTCCCTGCAGCCCGTGGAGTCAGAATCTGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS TCA 72 bp | GATGTGGGGGCGGCAGGACGTGAGGGCTGCAACCTCTaGGTCGTGGTTGCTCTAAGTCGGTCATGCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DVGAAGREGCNL*VVVALSRSCFL Trigger: AAGAAAGCATGACCGACTTAGAGCAACCACGACTCAGAGGTTGCAGCCCTCACGTCCTGCCGCCCCCACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS TCA 72 bp | GGACTTGAAAAGTCTGCTTCCGCCAATCCACTGTCCTaGCGAGGGTGGGCAGAGTCCTCTGAAGGAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLEKSASANPLS*RGWAESSEGGA Trigger: GGCACCTCCTTCAGAGGACTCTGCCCACCCTCGTCAGGACAGTGGATTGGCGGAAGCAGACTTTTCAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS TCA 72 bp | CAACTCACAGATTTTGCAGACCACGGAAGGGTCCGGTaGCGTGTGCACTCGGTCGATGTGGCACTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QLTDFADHGRVR*RVHSVDVALQL Trigger: CAGCTGGAGTGCCACATCGACCGAGTGCACACGTCACCGGACCCTTCCGTGGTCTGCAAAATCTGTGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
||
| CDS TCA 72 bp | TGTGCTCACAGTGATCGATGCTACCTTCACAGATTCTaGCTCCACGGGCTGCAGGGACACCTGGATCACGAC | + |
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Preference number: 6 (lower is better) Translates to: CAHSDRCYLHRF*LHGLQGHLDHD Trigger: GTCGTGATCCAGGTGTCCCTGCAGCCCGTGGAGTCAGAATCTGTGAAGGTAGCATCGATCACTGTGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS TCA 72 bp | AGCTCTGCATCTTCAGCAGCATCGTCATCGAGGACTTaGATGGGTTCTCCTGACCTCGGCTGTGGTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSASSAASSSRT*MGSPDLGCGSG Trigger: TCCAGAACCACAGCCGAGGTCAGGAGAACCCATTCAAGTCCTCGATGACGATGCTGCTGAAGATGCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS TCA 72 bp | CAAAGGCTCAATAGCAATAGGACTATCCGTCGACCTTaGTTCAGCTGGAGATGCTGGCAAGACAACCACGGC | + |
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Preference number: 6 (lower is better) Translates to: QRLNSNRTIRRP*FSWRCWQDNHG Trigger: GCCGTGGTTGTCTTGCCAGCATCTCCAGCTGAATCAAGGTCGACGGATAGTCCTATTGCTATTGAGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS GCA 72 bp | AGAGAGTTGGGAGCATCAAAGGAAGGTGTCCTCTGTTaGATATTCGAGGTATGGAAGGTACCTGAAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RELGASKEGVLC*IFEVWKVPEGG Trigger: GCCCCCTTCAGGTACCTTCCATACCTCGAATATGCAACAGAGGACACCTTCCTTTGATGCTCCCAACTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS CAA 72 bp | TCTGAACTTGAGAGTGTGACCAGAGGCGAACAGCACTaGGAAGAGCTACTAGGCACAACCTGTGGTGAACTA | + |
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Preference number: 6 (lower is better) Translates to: SELESVTRGEQH*EELLGTTCGEL Trigger: TAGTTCACCACAGGTTGTGCCTAGTAGCTCTTCCAAGTGCTGTTCGCCTCTGGTCACACTCTCAAGTTCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS TCA 72 bp | ACAGCACTTGGAAGAGCTACTAGGCACAACCTGTGGTaGACTACTTCTATAATCAGACTCGGACAAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TALGRATRHNLW*TTSIIRLGQRL Trigger: GAGCCTTTGTCCGAGTCTGATTATAGAAGTAGTTCACCACAGGTTGTGCCTAGTAGCTCTTCCAAGTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS CCA 72 bp | TCAAAGGAAGGTGTCCTCTGTTGCATATTCGAGGTATaGAAGGTACCTGAAGGGGGCAAAGCTGAAGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: SKEGVLCCIFEV*KVPEGGKAEES Trigger: ACTTTCTTCAGCTTTGCCCCCTTCAGGTACCTTCCATACCTCGAATATGCAACAGAGGACACCTTCCTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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| CDS CCA 72 bp | CAATCTCAATACTATGGTCAGGCCTCTGTGGATTTATaGAAAAATGGCACTTCGATACATACAAATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QSQYYGQASVDL*KNGTSIHTNFH Trigger: ATGAAAATTTGTATGTATCGAAGTGCCATTTTTCCATAAATCCACAGAGGCCTGACCATAGTATTGAGATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061617.7 |
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