Pregenerated sensors for ZFP28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062861Ensembl transcript IDs: ENSMUST00000081022.9, ENSMUST00000207086.2, ENSMUST00000207465.2, ENSMUST00000207809.2, ENSMUST00000208338.2, ENSMUST00000208949.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGTTACCCGTTCAGCATGTGAGTCCTGCCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGCTGGCCTACGGAGCCCCGGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: PVTRSACESCLGSRS*ASCTDCWPTEPRSP Trigger: TGGTGACCGGGGCTCCGTAGGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTAACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR GCA 90 bp | CCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGCTaGCCGTACCATGGAGCACTTAGGTCTATGGGGCAGGAGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PTYPVCREHCTTLPG*PYHGALRSMGQELF Trigger: AAACAGCTCCTGCCCCATAGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR GCA 90 bp | CACACACATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTaGACCACCCTCCCAGGCTGCCCGTACCATGGAGCACTTAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HTHKHMPTYPVCREH*TTLPGCPYHGALRS Trigger: AGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTATGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR GCA 90 bp | TTAGTGCTCCAAGTTCTGCCTGTTACCCGTTCAGCATGTGAGTCCTaGCTTGGAAGCAGATCCTGGGCTTCCTGTACAGACTGCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LVLQVLPVTRSACES*LGSRSWASCTDCWH Trigger: GTGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTAACAGGCAGAACTTGGAGCACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
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| 3UTR TCA 90 bp | CGGTCACCACAGTTCTCCCAAGTCACACTCTTACAGAAACTCCTCTaGGCTGACACAAGCTGTGCAGGACTGTCTCTAGCCAGACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RSPQFSQVTLLQKLL*ADTSCAGLSLARPE Trigger: CTCAGGTCTGGCTAGAGACAGTCCTGCACAGCTTGTGTCAGCTCAGAGGAGTTTCTGTAAGAGTGTGACTTGGGAGAACTGTGGTGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR CCA 90 bp | GGAGGGAACTCCTTGGTCTCCTGCATGGCCTTCAAGTCCAGGTGCTaGCCTTTTCTCATCTTCCTTTTCATCATCCAGGGATCCCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GGNSLVSCMAFKSRC*PFLIFLFIIQGSLP Trigger: AGGAAGGGATCCCTGGATGATGAAAAGGAAGATGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR GCA 90 bp | TTTGGAGGGAACTCCTTGGTCTCCTGCATGGCCTTCAAGTCCAGGTaGTGGCCTTTTCTCATCTTCCTTTTCATCATCCAGGGATCCCTT | + |
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Preference number: 1 (lower is better) Translates to: FGGNSLVSCMAFKSR*WPFLIFLFIIQGSL Trigger: AAGGGATCCCTGGATGATGAAAAGGAAGATGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR CCA 90 bp | CCAGGAATAATGTCTCCTCACTTAAGTCCTTTGGAGGGAACTCCTTaGTCTCCTGCATGGCCTTCAAGTCCAGGTGCTGGCCTTTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: PGIMSPHLSPLEGTP*SPAWPSSPGAGLFS Trigger: TGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGAGGAGACATTATTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR GCA 90 bp | AATGTCTCCTCACTTAAGTCCTTTGGAGGGAACTCCTTGGTCTCCTaGATGGCCTTCAAGTCCAGGTGCTGGCCTTTTCTCATCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: NVSSLKSFGGNSLVS*MAFKSRCWPFLIFL Trigger: AAGGAAGATGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGAGGAGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR CCA 90 bp | TCTCCTCACTTAAGTCCTTTGGAGGGAACTCCTTGGTCTCCTGCATaGCCTTCAAGTCCAGGTGCTGGCCTTTTCTCATCTTCCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: SPHLSPLEGTPWSPA*PSSPGAGLFSSSFS Trigger: TGAAAAGGAAGATGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR TCA 90 bp | CGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTaGCTGTCTCTTGCTCATTCCTTTCAAACGTACACTCAGAATCCT | + |
|
Preference number: 1 (lower is better) Translates to: RYTYHLSPLRRLCSE*LSLAHSFQTYTQNP Trigger: AGGATTCTGAGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR TCA 90 bp | GTGACTGTCTCTTGCTCATTCCTTTCAAACGTACACTCAGAATCCTaGTCTCTGAAAGTGGAGCACTCAAGTTTAGTGCTCCAAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: VTVSCSFLSNVHSES*SLKVEHSSLVLQVL Trigger: CAGAACTTGGAGCACTAAACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTGAGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR TCA 90 bp | GGGTACGCATGTGATAGCACTTGTGTGAAGTTTGGAGGACTCTCCTaGATTAGTTCTCTCCTTCTACCACCTGAATTGCAAGGATTAAAT | + |
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Preference number: 1 (lower is better) Translates to: GYACDSTCVKFGGLS*ISSLLLPPELQGLN Trigger: ATTTAATCCTTGCAATTCAGGTGGTAGAAGGAGAGAACTAATTCAGGAGAGTCCTCCAAACTTCACACAAGTGCTATCACATGCGTACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGGGCTTCCTGTACAGACTGCTGGCCTACGGAGCCCCGGTCACCACAGTTACTGATGAACCTGGGTaGCCAGAGAAGGGTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: ILGFLYRLLAYGAPVTTVTDEPG*PEKGGL Trigger: TAGTCCACCCTTCTCTGGCCACCCAGGTTCATCAGT...AACTGTGGTGACCGGGGCTCCGTAGGCCAGCAGTCTGTACAGGAAGCCCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTGTCAGCATGTGAGTCCTaGCTTGGAAGCAGATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PDSIHIPSLPSEKALFGVSACES*LGSRSW Trigger: CCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGA...CACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTAGGTCTATGGGGCAGGAGCTGTTTTCTTAGCACTGCCAGGAATAATGTCTCCTCTGCTCAGAGTTaGGCCATTCCCACTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HLGLWGRSCFLSTARNNVSSAQS*AIPTPP Trigger: AGGAGGAGTGGGAATGGCTCAACTCTGAGCAGAGGA...GACATTATTCCTGGCAGTGCTAAGAAAACAGCTCCTGCCCCATAGACCTAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACCATCTTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTACCCGTTCAGCATGTaGGTCCTGCCTTGGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ETIFQIRYTYHLSPLRRLYPFSM*VLPWKQ Trigger: CTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTA...GAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGATGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTCTGTTCGGAGTGACTGTCTCTTGCTCATTCCTTTCAAACGTACACTCTACCCGTTCAGCATGTaGGTCCTGCCTTGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: EGSVRSDCLLLIPFKRTLYPFSM*VLPWKQ Trigger: CTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTA...GAGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGAGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: FQIRYTYHLSPLRRLCSELGSRS*ASCTDC Trigger: GCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAG...CTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTGAGAAGGCTCTGTTCGGAGTGACTGTCTCTTGCTCATTCCTTTCAAACCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: PSEKALFGVTVSCSFLSNLGSRS*ASCTDC Trigger: GCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAG...GTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGAGCCTTCTCAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR GCA 90 bp | ACACATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCCAGTACAGACTCCTCTaGTCAGAGTTGAGCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: THKHMPTYPVCREHCTTLQYRLL*SELSHS Trigger: GGAATGGCTCAACTCTGAGCAGAGGAGTCTGTACTG...GAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR CAA 90 bp | GTTTTCTTAGCACTGCCAGGAATAATGTCTCCTCACTTAAGTCCTTaGGAGGGAACTCCTTGGTCTCCTGCATGGCCTTCAAGTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VFLALPGIMSPHLSP*EGTPWSPAWPSSPG Trigger: ACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGAGGAGACATTATTCCTGGCAGTGCTAAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTGACTGTCTCTTGCTCACAGAATCCTGATCTCTaGAAGTGGAGCACTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: IPSLPSEKALFGVTVSCSQNPDL*KWSTQV Trigger: AACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTG...TGAGCAAGAGACAGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR TCA 90 bp | GATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTGACTCAGAATCCTGATCTCTaGAAGTGGAGCACTCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: DSIHIPSLPSEKALFGVTQNPDL*KWSTQV Trigger: AACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTG...AGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGGGAGGAGCTCTGGGTaGAAGTTTTCTTACATTCAT | + |
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Preference number: 2 (lower is better) Translates to: IFQIRYTYHLSPLRRLCSGRSSG*KFSYIH Trigger: ATGAATGTAAGAAAACTTTCACCCAGAGCTCCTCCC...CGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207809.2 ENSMUST00000208949.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAGCTGGTAAACGAGCGTaGTGGAAATGTCGAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIAGKRA*WKCRGS Trigger: AGAGCCTCGACATTTCCACCACGCTCGTTTACCAGC...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTATGACTTCTCTCGTCTGAACTGTTCAAATGAAACCATCTTCCAGATTCGAGTCTCTAGCCAGACCTaGGTTGGTCTTCAAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SYDFSRLNCSNETIFQIRVSSQT*VGLQAL Trigger: TAGGGCTTGAAGACCAACTCAGGTCTGGCTAGAGAC...TCGAATCTGGAAGATGGTTTCATTTGAACAGTTCAGACGAGAGAAGTCATAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAGGCTTATTATTGCGGTaGGAGGGGTTAGAAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIGLLLR*EGLETF Trigger: AAAGGTTTCTAACCCCTCCCACCGCAATAATAAGCC...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTGAAGTTTACCAAGAATaGATTCACAAACCCGTGACT | + |
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Preference number: 2 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVEVYQE*IHKPVT Trigger: AGTCACGGGTTTGTGAATGCATTCTTGGTAAACTTC...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR GCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAGCAGCTACTCAATTCTaGCACTGTAAACAACTAACC | + |
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Preference number: 2 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIAATQF*HCKQLT Trigger: GGTTAGTTGTTTACAGTGGCAGAATTGAGTAGCTGC...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR CAA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTaGTGTCTCTATAGGGTCAGAAAGTCTCCAGTGCAGCTACTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LETFVHSPLLFSSKY*CLYRVRKSPVQLLN Trigger: ATTGAGTAGCTGCACTGGAGACTTTCTGACCCTATAGAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTCAGGACAACTGTTTTTaGACAGTTAAGCAAACATTC | + |
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Preference number: 2 (lower is better) Translates to: VPLPAESLHWPNILGGFVQDNCF*TVKQTF Trigger: GAATGTTTGCTTAACTGTGCAAAAACAGTTGTCCTG...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCAGCGCACCATACCCTTaGCTTAGAACCAAGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ISCILNIYCMCLGYACDSSAPYP*LRTKFS Trigger: TGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCT...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCTTTGGAGGACTCTCCTaGATTAGTTCTCTCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: ISCILNIYCMCLGYACDSFGGLS*ISSLLL Trigger: TAGAAGGAGAGAACTAATTCAGGAGAGTCCTCCAAA...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR GCA 72 bp | CCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGCTaGCCGTACCATGGAGCACTTAGGTCTATGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PVCREHCTTLPG*PYHGALRSMGQ Trigger: CTGCCCCATAGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR CCA 72 bp | CTTGGAAGCAGATCCTGGGCTTCCTGTACAGACTGCTaGCCTACGGAGCCCCGGTCACCACAGTTCTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LGSRSWASCTDC*PTEPRSPQFSQ Trigger: TTGGGAGAACTGTGGTGACCGGGGCTCCGTAGGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR CCA 72 bp | CGTTCAGCATGTGAGTCCTGCCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGCTGGCCTACGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: RSACESCLGSRS*ASCTDCWPTEP Trigger: GGGCTCCGTAGGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR CCA 72 bp | TCCCAGGCTGCCCGTACCATGGAGCACTTAGGTCTATaGGGCAGGAGCTGTTTTCTTAGCACTGCCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SQAARTMEHLGL*GRSCFLSTARN Trigger: ATTCCTGGCAGTGCTAAGAAAACAGCTCCTGCCCCATAGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR CCA 72 bp | ATGTCTCCTCACTTAAGTCCTTTGGAGGGAACTCCTTaGTCTCCTGCATGGCCTTCAAGTCCAGGTGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: MSPHLSPLEGTP*SPAWPSSPGAG Trigger: GCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGAGGAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR GCA 72 bp | TCACTTAAGTCCTTTGGAGGGAACTCCTTGGTCTCCTaGATGGCCTTCAAGTCCAGGTGCTGGCCTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SLKSFGGNSLVS*MAFKSRCWPFL Trigger: GAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR-3UTR CAA 90 bp | ACACATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCTTTGGAGGGAACTCCTaGGTCTCCTGCATGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: THKHMPTYPVCREHCTTLFGGNS*VSCMAF Trigger: GAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAA...GAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR TCA 72 bp | GTCTCACTAAGTTGCCTAGAGCTGGCCTTGAATCCATaGACTCTAGGATTGCAGGTGAGCGCACCATACCCT | + |
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Preference number: 3 (lower is better) Translates to: VSLSCLELALNP*TLGLQVSAPYP Trigger: AGGGTATGGTGCGCTCACCTGCAATCCTAGAGTTCATGGATTCAAGGCCAGCTCTAGGCAACTTAGTGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| 3UTR TCA 72 bp | CAGTTCTCCCAAGTCACACTCTTACAGAAACTCCTCTaGGCTGACACAAGCTGTGCAGGACTGTCTCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: QFSQVTLLQKLL*ADTSCAGLSLA Trigger: GGCTAGAGACAGTCCTGCACAGCTTGTGTCAGCTCAGAGGAGTTTCTGTAAGAGTGTGACTTGGGAGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| 3UTR CCA 72 bp | TTAAGTCCTTTGGAGGGAACTCCTTGGTCTCCTGCATaGCCTTCAAGTCCAGGTGCTGGCCTTTTCTCATCT | + |
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Preference number: 3 (lower is better) Translates to: LSPLEGTPWSPA*PSSPGAGLFSS Trigger: AGATGAGAAAAGGCCAGCACCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAAGGACTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTAGGTCTATGGGGCAGGAGCTGTTTTCTTAGCACTGCCAGGAATAATGTCCCAGGGATCCCTTCCTaGTTCCAACGAGGTGATCAT | + |
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Preference number: 3 (lower is better) Translates to: HLGLWGRSCFLSTARNNVPGIPS*FQRGDH Trigger: ATGATCACCTCGTTGGAACAAGGAAGGGATCCCTGG...GACATTATTCCTGGCAGTGCTAAGAAAACAGCTCCTGCCCCATAGACCTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| 3UTR TCA 72 bp | TCTTCCAGATTCGATACACATACCATCTCTCCCCTCTaGGAAGGCTCTGTTCGGAGTGACTGTCTCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSRFDTHTISPL*EGSVRSDCLLL Trigger: GAGCAAGAGACAGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
||
| 3UTR TCA 72 bp | TACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTaGCTGTCTCTTGCTCATTCCTTTCAAACGTACACT | + |
|
Preference number: 3 (lower is better) Translates to: YHLSPLRRLCSE*LSLAHSFQTYT Trigger: AGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
||
| 3UTR CCA 72 bp | GCCCTAAAAAGGTATAAACATACTGATGAACCTGGGTaGCCAGAGAAGGGTGGACTATGTCCATACACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALKRYKHTDEPG*PEKGGLCPYTV Trigger: TACAGTGTATGGACATAGTCCACCCTTCTCTGGCCACCCAGGTTCATCAGTATGTTTATACCTTTTTAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
||
| 3UTR GCA 72 bp | AGGATTGGCAAGAGGTACCTTTACCTGCTGAGTCATTaGATTGGCCTAATATTCTTGGGGGTTTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RIGKRYLYLLSH*IGLIFLGVLLL Trigger: CAACAACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTTGCCAATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR CCA 72 bp | TGGCAAGAGGTACCTTTACCTGCTGAGTCATTGCATTaGCCTAATATTCTTGGGGGTTTTGTTGTTGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: WQEVPLPAESLH*PNILGGFVVVW Trigger: CCATACAACAACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR TCA 72 bp | TCTTGCTCATTCCTTTCAAACGTACACTCAGAATCCTaGTCTCTGAAAGTGGAGCACTCAAGTTTAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SCSFLSNVHSES*SLKVEHSSLVL Trigger: GAGCACTAAACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTGAGTGTACGTTTGAAAGGAATGAGCAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 ENSMUST00000208949.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATACTTCTACCACCTGAATaGCAAGGATTAAATTCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQYLGGRDSEFKDSLVYILLPPE*QGLNSG Trigger: ACCCGAATTTAATCCTTGCAATTCAGGTGGTAGAAG...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATACCTCATTCTATTGCATaGTTTCCATCAGAGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIPHSIA*FPSELI Trigger: AATCAGCTCTGATGGAAACAATGCAATAGAATGAGG...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR GCA 72 bp | CCCAGAGTTAACACTTCTTTAGAAGTTTACCAAGAATaGATTCACAAACCCGTGACTTTCTATAGATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PRVNTSLEVYQE*IHKPVTFYRSN Trigger: ATTTGATCTATAGAAAGTCACGGGTTTGTGAATGCATTCTTGGTAAACTTCTAAAGAAGTGTTAACTCTGGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | ATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGTCACTGCTCCTTGCTaGTCCTGGGAGGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: INTCQLTLCVVNTAPPSQVTAPC*SWEARL Trigger: CAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGAC...CTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGCAGGCCTGGCCTTTGTaGAGAGGGCGCCACGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRQAWPL*RGRHAP Trigger: TGGGGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTG...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTGACCTCCACCAGGCCTaGCCTTTGTGCAGAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCDLHQA*PLCRGR Trigger: GCGCCCTCTGCACAAAGGCCAGGCCTGGTGGAGGTC...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | GATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTGACTGTGTGTCGTGAACACTaGACCACCCTCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSIHIPSLPSEKALFGVTVCREH*TTLPGC Trigger: GCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACAC...AGTCACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 |
||
| CDS-3UTR GCA 90 bp | GAAACCATCTTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCGTGTGTCGTGAACACTaGACCACCCTCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETIFQIRYTYHLSPLRRLVCREH*TTLPGC Trigger: GCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACAC...GAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGATGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207809.2 ENSMUST00000208338.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGTTTAGTGCTCCAAGTTCTGCCTGTTACCCGTTCAGCATGTGAGTCCTGCGTCTCTAGCCAGACCTaGGTTGGTCTTCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLVLQVLPVTRSACESCVSSQT*VGLQAP Trigger: AGGGGCTTGAAGACCAACTCAGGTCTGGCTAGAGAC...GCAGGACTCACATGCTGAACGGGTAACAGGCAGAACTTGGAGCACTAAACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
||
| CDS-3UTR GCA 90 bp | ACACACATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCGGGCAGCTTCCTGTTTaGGGTTTATCTCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: THINTCQLTLCVVNTAPPGQLPV*GLSPGG Trigger: TCCTCCAGGAGATAAACCGCAAACAGGAAGCTGCCC...GGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTATGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTGTGTGTCGTGAACACTaGACCACCCTCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVVCREH*TTLPGC Trigger: GCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACAC...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGGAGTTGGAGGGAACTCCTTaGTCTCCTGCATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQIRYTYHLSPLRRLCSELEGTP*SPAWPS Trigger: TGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAA...CTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGGTCTCTAGCCAGACCTaGGTTGGTCTTCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRVSSQT*VGLQAP Trigger: AGGGGCTTGAAGACCAACTCAGGTCTGGCTAGAGAC...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTAGTGTGCAGTCTGCCTaGAGGCCCTCCTGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVSVQSA*RPSCPS Trigger: AGAAGGGCAGGAGGGCCTTCAGGCAGACTGCACACT...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCLGSRS*ASCTDC Trigger: GCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAG...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTCAGTACAGACTCCTCTaGTCAGAGTTGAGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCQYRLL*SELSHS Trigger: GGAATGGCTCAACTCTGAGCAGAGGAGTCTGTACTG...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTTGTGTCTCGCACCTCTGGTGCCGTaGGAAGGAGGACCCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LETFVHSPLLFSSKYLCLAPLVP*EGGPVT Trigger: AGTGACGGGTCCTCCTTCGCACGGCACCAGAGGTGC...GAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGTTCGGAGTGACTGTCTCTTGCTCATTCCTTTCAAACGTACACTCAGACTTATTTTGGATGTGTaGATGTGGCAGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSVRSDCLLLIPFKRTLRLILDV*MWQWGW Trigger: CCACCCCCACTGCCACATGCACACATCCAAAATAAG...TCTGAGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTCTTGTTCCAACGAGGTaGTCATATCTGGCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCLVPTR*SYLAEK Trigger: CTTCTCAGCCAGATATGATCACCTCGTTGGAACAAG...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | GAAACCATCTTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTTACAGAAACTCCTCTaGGCTGACACAAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETIFQIRYTYHLSPLRRLLQKLL*ADTSCA Trigger: TGCACAGCTTGTGTCAGCTCAGAGGAGTTTCTGTAA...GAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGATGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
||
| CDS-3UTR TCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTTACCCGTTCAGCATGTaGGTCCTGCCTTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVYPFSM*VLPWKQ Trigger: CTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTA...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAACCATCTCTCCCCTCTaGGAAGGCTCTGTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYLGGRDSEFKDSLVYITISPL*EGSVRS Trigger: ACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGT...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTGAAGGCAAAGAGTGGTaGGCAGGTGACTTTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVEGKEW*AGDFPE Trigger: TTCCGGAAAGTCACCTGCTCACCACTCTTTGCCTTC...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTGGGCAGCTTCCTGTTTaGGGTTTATCTCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVGQLPV*GLSPGG Trigger: TCCTCCAGGAGATAAACCGCAAACAGGAAGCTGCCC...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCGGAGTGACTGTCTCTTGCTCATTCCTTTCAAACGTACACTCAGAATCAACTCCTTGGTCTCCTaGATGGCCTTCAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRSDCLLLIPFKRTLRINSLVS*MAFKSR Trigger: CCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTT...GATTCTGAGTGTACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCGAACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTTGTACACTAAGGGACTaGCGGTGGCTAAAGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCCTLRD*RWLKAL Trigger: TAAAGCCTTTAGCCACCGGCAGTCCCTTAGTGTACA...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGCTGGCCTTTTCTCATCTTCCTTTTCATCATCCAGGGATCCCTTCCTGGAAGTTGGTATCTCTaGAAAACAGAGCTTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRCWPFLIFLFIIQGSLPGSWYL*KTELCA Trigger: CGCACAAAGCTCTGTTTTCCAGAGATACCAACTTCC...AGGAAGGGATCCCTGGATGATGAAAAGGAAGATGAGAAAAGGCCAGCACCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGTGCTGGCCTTTTCTCATCTTCCTTTTCATCATCCAGGGATCCCTTCCTTCTCCTGGAGGAAGTTaGTATCTCTGGAAAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRCWPFLIFLFIIQGSLPSPGGS*YLWKTE Trigger: CTCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGA...AGGAAGGGATCCCTGGATGATGAAAAGGAAGATGAGAAAAGGCCAGCACCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCGTCACTGCTCCTTGCTaGTCCTGGGAGGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSVTAPC*SWEARL Trigger: CAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGAC...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGTTACAGAAACTCCTCTaGGCTGACACAAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRLQKLL*ADTSCA Trigger: TGCACAGCTTGTGTCAGCTCAGAGGAGTTTCTGTAA...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGGTACACTCAGAATCCTaGTCTCTGAAAGTGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRVHSES*SLKVEH Trigger: GTGCTCCACTTTCAGAGATCAGGATTCTGAGTGTAC...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTGCGAGGTGTTCTGTATaGAAGCTTTGCCACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVARCSV*KLCHTP Trigger: CGGAGTGTGGCAAAGCTTTCATACAGAACACCTCGC...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGATGCGTGGCAAGCTGTaGGCTGATGCTGAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRMRGKL*ADAERF Trigger: AAATCTTTCAGCATCAGCTCACAGCTTGCCACGCAT...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTAACTCCTTGGTCTCCTaGATGGCCTTCAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVNSLVS*MAFKSR Trigger: CCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTT...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTTCTCCTGGAGGAAGTTaGTATCTCTGGAAAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCSPGGS*YLWKTE Trigger: CTCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGA...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATATTGGAGGGAACTCCTTaGTCTCCTGCATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQYLGGRDSEFKDSLVYILEGTP*SPAWPS Trigger: TGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAA...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | CACAGTTATGACTTCTCTCGTCTGAACTGTTCAAATGAAACCATCTTCCAGATTTACCCGTTCAGCATGTaGGTCCTGCCTTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSYDFSRLNCSNETIFQIYPFSM*VLPWKQ Trigger: CTGCTTCCAAGGCAGGACTCACATGCTGAACGGGTA...AATCTGGAAGATGGTTTCATTTGAACAGTTCAGACGAGAGAAGTCATAACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
||
| CDS-3UTR TCA 90 bp | CAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTACCATCTCTCCCCTCTaGGAAGGCTCTGTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLLDLRRNFYLSHSYDFSTISPL*EGSVRS Trigger: ACTCCGAACAGAGCCTTCTCAGAGGGGAGAGATGGT...AGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTACAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGTGTGTCGTGAACACTaGACCACCCTCCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPLQLLDLRRNFYLSHSYVCREH*TTLPGC Trigger: GCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACAC...ATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207465.2 ENSMUST00000207809.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCGCAAAGTGTGCAGTCTaGCTGAAGGCCCTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSAKCAV*LKALLP Trigger: GGGCAGGAGGGCCTTCAGGCAGACTGCACACTTTGC...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | GATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTCGTCTGAACTTGGAGGGAACTCCTTaGTCTCCTGCATGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLRRNFYLSHSYDFSRLNLEGTP*SPAWPS Trigger: TGAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAA...GTTCAGACGAGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR CCA 90 bp | GATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTCGTCTGAACCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLRRNFYLSHSYDFSRLNLGSRS*ASCTDC Trigger: GCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAG...GTTCAGACGAGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS-3UTR CCA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTTGGACTCTCTTATGTTaGTTAAGGTGTCCAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMNKGRERRAGKRAWWKCWTLLC*LRCPIW Trigger: CCAGATTGGACACCTTAACCAACATAAGAGAGTCCA...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | TTACAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCGTCTCTAGCCAGACCTaGGTTGGTCTTCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLLDLRRNFYLSHSYDFVSSQT*VGLQAP Trigger: AGGGGCTTGAAGACCAACTCAGGTCTGGCTAGAGAC...GAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR GCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTAAGGTCACCAAGCCCTaGGACTTGGCTTTATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVKVTKP*DLALCL Trigger: TAGACATAAAGCCAAGTCGCAGGGCTTGGTGACCTT...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR GCA 90 bp | CAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTAACTCCTTGGTCTCCTaGATGGCCTTCAAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLDLRRNFYLSHSYDFSNSLVS*MAFKSR Trigger: CCTGGACTTGAAGGCCATGCAGGAGACCAAGGAGTT...AGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR GCA 90 bp | CAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTTCAGCATGTGAGTCCTaGCTTGGAAGCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLDLRRNFYLSHSYDFSSACES*LGSRSW Trigger: CCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGA...AGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS-3UTR GCA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTTGTGTCTCATGGTGAGCAAAGTGTaGAGTCTGCCTGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LETFVHSPLLFSSKYLCLMVSKV*SLPEGP Trigger: AGGGCCTTCAGGCAGACTGCACACTTTGCTCACCAT...GAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR CAA 72 bp | CAGGATTGGCAAGAGGTACCTTTACCTGCTGAGTCATaGCATTGGCCTAATATTCTTGGGGGTTTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDWQEVPLPAES*HWPNILGGFVV Trigger: AACAACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTTGCCAATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR TCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCTCCTCTGCTCAGAGTTaGGCCATTCCCACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSSSAQS*AIPTPP Trigger: AGGAGGAGTGGGAATGGCTCAACTCTGAGCAGAGGA...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAGGGAGGAGCTCTGGGTaGAAGTTTTCTTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIGRSSG*KFSYIH Trigger: ATGAATGTAAGAAAACTTTCACCCAGAGCTCCTCCC...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTATGTTGAGTACAGGATaGGTTATCACCAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVMLSTG*VITKGL Trigger: AAGGCCTTTGGTGATAACTCATCCTGTACTCAACAT...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTGGAAGTTGGTATCTCTaGAAAACAGAGCTTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVGSWYL*KTELCA Trigger: CGCACAAAGCTCTGTTTTCCAGAGATACCAACTTCC...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| 3UTR CAA 72 bp | TTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTaGTGTCTCTATAGGGTCAGAAAGTCTCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVHSPLLFSSKY*CLYRVRKSPVQ Trigger: CTGCACTGGAGACTTTCTGACCCTATAGAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR TCA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTACCTAAAGGATTTGTaGCACACTTCACACGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVYLKDL*HTSHVY Trigger: ATACACGTGTGAAGTGTGTCACAAATCCTTTAGGTA...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR GCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCTCAGCATGTGAGTCCTaGCTTGGAAGCAGATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSSACES*LGSRSW Trigger: CCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGA...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR GCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTGGAGTGACTGTCTCTTaGTCATTCCTTTCAAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVGVTVS*SFLSNV Trigger: TACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCC...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR TCA 90 bp | TTACAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCCTTGTTCCAACGAGGTaGTCATATCTGGCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLLDLRRNFYLSHSYDFLVPTR*SYLAEK Trigger: CTTCTCAGCCAGATATGATCACCTCGTTGGAACAAG...GAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR TCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATATCTGAACTGTTCAAATaGAACCATCTTCCAGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQYLGGRDSEFKDSLVYISELFK*NHLPDS Trigger: CGAATCTGGAAGATGGTTTCATTTGAACAGTTCAGA...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR TCA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTATGACTTCTCTCGTCTaGACTGTTCAAATGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLPAESLHWPNILGGFVMTSLV*TVQMKP Trigger: TGGTTTCATTTGAACAGTTCAGACGAGAGAAGTCAT...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CCA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATATTAAGGTGTCCAATCTaGATGAAGGTTTTCCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SQYLGGRDSEFKDSLVYILRCPI*MKVFRH Trigger: ATGTCGGAAAACCTTCATCCAGATTGGACACCTTAA...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCCCACAGGATTCGATGTaGAAGGCAAAGAGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSPQDSM*KAKSGE Trigger: CTCACCACTCTTTGCCTTCCACATCGAATCCTGTGG...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR TCA 90 bp | TTTCCTTTACAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATTTACAGAAACTCCTCTaGGCTGACACAAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLQLLDLRRNFYLSHSYLQKLL*ADTSCA Trigger: TGCACAGCTTGTGTCAGCTCAGAGGAGTTTCTGTAA...ATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| 3UTR CAA 72 bp | CTGAACAGATTCCGGTTTCCTTTACAACTACTGGATTaGAGGAGAAACTTTTACCTGAGTCACAGTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNRFRFPLQLLD*RRNFYLSHSYD Trigger: GTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAAAGGAAACCGGAATCTGTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207465.2 ENSMUST00000207809.2 ENSMUST00000208949.2 |
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| CDS-3UTR TCA 90 bp | ATAAGCTGTATTTTAAATATCTACTGTATGTGTTTGGGGTACGCATGTGATAGCCAGAATCCTGATCTCTaGAAGTGGAGCACTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCILNIYCMCLGYACDSQNPDL*KWSTQV Trigger: AACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTG...GCTATCACATGCGTACCCCAAACACATACAGTAGATATTTAAAATACAGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR GCA 90 bp | TTACAACTACTGGATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCGGAGTGACTGTCTCTTaGTCATTCCTTTCAAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQLLDLRRNFYLSHSYDFGVTVS*SFLSNV Trigger: TACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCC...GAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR CCA 90 bp | CACAGTTATGACTTCTCTCGTCTGAACTGTTCAAATGAAACCATCTTCCAGATTAAGGTAGATTGTGAATaGCCTTATTTTGGATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSYDFSRLNCSNETIFQIKVDCE*PYFGCV Trigger: CACACATCCAAAATAAGGCCATTCACAATCTACCTT...AATCTGGAAGATGGTTTCATTTGAACAGTTCAGACGAGAGAAGTCATAACTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
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| CDS CCA 90 bp | CCGAGGTCACTGCTCCTTGCTGATCCTGGGAGGCCAGGCTGTTCCTaGAGCGCGGCCTTCCCCGGTCGGGGCTCCCAGGAGCAACTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRSLLLADPGRPGCS*SAAFPGRGSQEQLQ Trigger: CTGTAGTTGCTCCTGGGAGCCCCGACCGGGGAAGGCCGCGCTCCAGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGACCTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS TCA 90 bp | AGCAGATCCTGGGCTTCCTGTACAGACTGCTGGCCCTGTGTGTCGTaGACACTGCACCACCCTCCCAGGCTGCCCGTACCATGGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SRSWASCTDCWPCVS*TLHHPPRLPVPWST Trigger: AGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS GCA 90 bp | ACTGCTGGCCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGCTaGCCGTACCATGGAGCACTTAGGTCTATGGGGCAGGAGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAGPVCREHCTTLPG*PYHGALRSMGQELF Trigger: AAACAGCTCCTGCCCCATAGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGCCAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS GCA 90 bp | CTTCAAGCCCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGCTaGCCGTACCATGGAGCACTTAGGTCTATGGGGCAGGAGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQAPVCREHCTTLPG*PYHGALRSMGQELF Trigger: AAACAGCTCCTGCCCCATAGACCTAAGTGCTCCATGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGGCTTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081022.9 ENSMUST00000207465.2 ENSMUST00000208338.2 |
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| CDS-3UTR CAA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTCACCAGGCCTGGCCTTaGTGCAGAGGGCGCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: RMNKGRERRAGKRAWWKCHQAWP*CRGRHA Trigger: GGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTGGTG...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS TCA 90 bp | TTCCGGAATGAATCTGCTGATGGTGAGCAAAGTGTGCAGTCTGCCTaGAGGCCCTCCTGCCCTTCTTGTAGTTGTACGTTCTCTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FRNESADGEQSVQSA*RPSCPSCSCTFSPR Trigger: CCGGGGAGAGAACGTACAACTACAAGAAGGGCAGGAGGGCCTTCAGGCAGACTGCACACTTTGCTCACCATCAGCAGATTCATTCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS CCA 90 bp | CAGCTTCCTGTTTGCGGTTTATCTCCTGGAGGAAGTTGGTATCTCTaGAAAACAGAGCTTTGTGCGCGGTCCCCGAGGTCACTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLPVCGLSPGGSWYL*KTELCARSPRSLLL Trigger: AAGGAGCAGTGACCTCGGGGACCGCGCACAAAGCTCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGATAAACCGCAAACAGGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081022.9 ENSMUST00000207086.2 |
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| CDS-3UTR CAA 90 bp | ACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGGCTGCCACTGAAAACTGCGACTaGGCTTTATGTCTAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TCQLTLCVVNTAPPSQAATENCD*ALCLVP Trigger: AGGGACTAGACATAAAGCCAAGTCGCAGTTTTCAGT...GGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
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| CDS-3UTR CAA 90 bp | ATCTTCCAGATTCGATACACATACCATCTCTCCCCTCTGAGAAGGCTCTGTTCGCATGTGAGTCCTGCCTaGGAAGCAGATCCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IFQIRYTYHLSPLRRLCSHVSPA*EADPGL Trigger: AAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATG...CGAACAGAGCCTTCTCAGAGGGGAGAGATGGTATGTGTATCGAATCTGGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGTTTGGAGGGAACTCCTaGGTCTCCTGCATGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRFGGNS*VSCMAF Trigger: GAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAA...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTCACTCGTACGGCTTCTaGCCTGTATGGCACCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVHSYGF*PVWHLW Trigger: CCAGAGGTGCCATACAGGCAAGAAGCCGTACGAGTG...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CAA 90 bp | ATAAACACATGCCAACTTACCCTGTGTGTCGTGAACACTGCACCACCCTCCCAGATCTCCTGGAGGAAGTaGGTATCTCTGGAAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: INTCQLTLCVVNTAPPSQISWRK*VSLENR Trigger: TCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGAT...CTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGTAAGTTGGCATGTGTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207086.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCAGAATCCTGATCTCTGAAAGTGGAGCACTCAAGTTTAGTGCTCCAAGTTTTGGAGGGAACTCCTaGGTCTCCTGCATGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLRILISESGALKFSAPSFGGNS*VSCMAF Trigger: GAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAA...ACTTGGAGCACTAAACTTGAGTGCTCCACTTTCAGAGATCAGGATTCTGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208338.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGCACTCAAGTTTAGTGCTCCAAGTTCTGCCTGTTACCCGTTCAGCATGGTGAATGGCCTTATTTaGGATGTGTGCATGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGALKFSAPSSACYPFSMVNGLI*DVCMWQ Trigger: CTGCCACATGCACACATCCAAAATAAGGCCATTCAC...CATGCTGAACGGGTAACAGGCAGAACTTGGAGCACTAAACTTGAGTGCTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208949.2 |
||
| CDS-3UTR CAA 90 bp | AGAATGAACAAAGGGAGAGAGAGACGAGCTGGTAAACGAGCGTGGTGGAAATGTGTGAATCCTCCTGTGTaGATTAAGCCCTATGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RMNKGRERRAGKRAWWKCVNPPV*IKPYVV Trigger: GACCACATAGGGCTTAATCAACACAGGAGGATTCAC...ACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTCTCCCTTTGTTCATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGATGAACCCTCTGGTGTaGAATGAGGTGAGTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRMNPLV*NEVSGL Trigger: CAGACCACTCACCTCATTCAACACCAGAGGGTTCAT...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS CCA 90 bp | ATGGATTCCAGACGAATTTGGAGAAGAGATCCACAGGATTCGATGTaGAAGGCAAAGAGTGGTGAGCAGGTGACTTTCCGGAATGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: MDSRRIWRRDPQDSM*KAKSGEQVTFRNES Trigger: AGATTCATTCCGGAAAGTCACCTGCTCACCACTCTTTGCCTTCCACATCGAATCCTGTGGATCTCTTCTCCAAATTCGTCTGGAATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CAA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATAACCAAGCCCTGCGACTaGGCTTTATGTCTAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQYLGGRDSEFKDSLVYITKPCD*ALCLVP Trigger: AGGGACTAGACATAAAGCCAAGTCGCAGGGCTTGGT...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
||
| CDS-3UTR CAA 90 bp | GATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTCGTCTGAACTTTGGAGGGAACTCCTaGGTCTCCTGCATGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLRRNFYLSHSYDFSRLNFGGNS*VSCMAF Trigger: GAAGGCCATGCAGGAGACCAAGGAGTTCCCTCCAAA...GTTCAGACGAGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR CAA 90 bp | CAGGTGAGCGCACCATACCCTTGGCTTAGAACCAAGTTTTCAAGAAAAAGAAGGGGATTCCAGACGAATTaGGAGAAGAGATCCACAGGA | + |
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Preference number: 5 (lower is better) Translates to: QVSAPYPWLRTKFSRKRRGFQTN*EKRSTG Trigger: TCCTGTGGATCTCTTCTCCAAATTCGTCTGGAATCC...CCTTCTTTTTCTTGAAAACTTGGTTCTAAGCCAAGGGTATGGTGCGCTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTTGTGTCTCCATGTGAGTCCTGCCTaGGAAGCAGATCCTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LETFVHSPLLFSSKYLCLHVSPA*EADPGL Trigger: AAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATG...GAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTATGAGTCTTCTGATGTaGTGCAAGGTGAGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVMSLLM*CKVSLL Trigger: CAGAAGGCTCACCTTGCACAACATCAGAAGACTCAT...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTATCTCCTGGAGGAAGTaGGTATCTCTGGAAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: KRYLYLLSHCIGLIFLGVISWRK*VSLENR Trigger: TCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGAT...AACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTACCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTTGTGTCTCCCAGGGATCCCTTCCTaGTTCCAACGAGGTGATCAT | + |
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Preference number: 5 (lower is better) Translates to: LETFVHSPLLFSSKYLCLPGIPS*FQRGDH Trigger: ATGATCACCTCGTTGGAACAAGGAAGGGATCCCTGG...GAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | TCACAGTACTTGGGAGGCAGAGACAGTGAATTCAAAGATAGCCTAGTCTACATACGGAGTGACTGTCTCTaGCTCATTCCTTTCAAACGT | + |
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Preference number: 5 (lower is better) Translates to: SQYLGGRDSEFKDSLVYIRSDCL*LIPFKR Trigger: ACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCG...TATGTAGACTAGGCTATCTTTGAATTCACTGTCTCTGCCTCCCAAGTACTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | GTACCTTTACCTGCTGAGTCATTGCATTGGCCTAATATTCTTGGGGGTTTTGTTCAGATAAGGGACGACTaGGTCTTGAATGTCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VPLPAESLHWPNILGGFVQIRDD*VLNVFP Trigger: TGGGAAGACATTCAAGACCAAGTCGTCCCTTATCTG...AACAAAACCCCCAAGAATATTAGGCCAATGCAATGACTCAGCAGGTAAAGGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS-3UTR CAA 90 bp | GATTTGAGGAGAAACTTTTACCTGAGTCACAGTTATGACTTCTCTCGTCTGAACCGGAGTGACTGTCTCTaGCTCATTCCTTTCAAACGT | + |
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Preference number: 5 (lower is better) Translates to: DLRRNFYLSHSYDFSRLNRSDCL*LIPFKR Trigger: ACGTTTGAAAGGAATGAGCAAGAGACAGTCACTCCG...GTTCAGACGAGAGAAGTCATAACTGTGACTCAGGTAAAAGTTTCTCCTCAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207465.2 |
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| CDS-3UTR CAA 90 bp | TTAGAAACCTTTGTACACTCTCCTCTACTCTTCAGCTCTAAGTATTTGTGTCTCTTACAACTACTGGATTaGAGGAGAAACTTTTACCTG | + |
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Preference number: 5 (lower is better) Translates to: LETFVHSPLLFSSKYLCLLQLLD*RRNFYL Trigger: CAGGTAAAAGTTTCTCCTCAAATCCAGTAGTTGTAA...GAGACACAAATACTTAGAGCTGAAGAGTAGAGGAGAGTGTACAAAGGTTTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS GCA 72 bp | TCCCCGCCGCCGGACCTCCACCAGGCCTGGCCTTTGTaGAGAGGGCGCCACGCCCCAGGAGGGCCCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SPPPDLHQAWPL*RGRHAPGGPRV Trigger: AACCCTGGGCCCTCCTGGGGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTGGTGGAGGTCCGGCGGCGGGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS CCA 72 bp | CAACTACAGTCCCCGCCGCCGGACCTCCACCAGGCCTaGCCTTTGTGCAGAGGGCGCCACGCCCCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: QLQSPPPDLHQA*PLCRGRHAPGG Trigger: CCCTCCTGGGGCGTGGCGCCCTCTGCACAAAGGCCAGGCCTGGTGGAGGTCCGGCGGCGGGGACTGTAGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS TCA 72 bp | GCTTTGTGCGCGGTCCCCGAGGTCACTGCTCCTTGCTaGTCCTGGGAGGCCAGGCTGTTCCTGGAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ALCAVPEVTAPC*SWEARLFLERG Trigger: GCCGCGCTCCAGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGACCTCGGGGACCGCGCACAAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081022.9 ENSMUST00000207086.2 |
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| CDS CAA 90 bp | TCTGGAAAACAGAGCTTTGTGCGCGGTCCCCGAGGTCACTGCTCCTaGCTGATCCTGGGAGGCCAGGCTGTTCCTGGAGCGCGGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SGKQSFVRGPRGHCS*LILGGQAVPGARPS Trigger: GGAAGGCCGCGCTCCAGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGACCTCGGGGACCGCGCACAAAGCTCTGTTTTCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS TCA 72 bp | TGGGCTTCCTGTACAGACTGCTGGCCCTGTGTGTCGTaGACACTGCACCACCCTCCCAGGCTGCCCGTACCA | + |
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Preference number: 6 (lower is better) Translates to: WASCTDCWPCVS*TLHHPPRLPVP Trigger: TGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGCCAGCAGTCTGTACAGGAAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS TCA 72 bp | CCAGACCTGAGTTGGTCTTCAAGCCCCTGTGTGTCGTaGACACTGCACCACCCTCCCAGGCTGCCCGTACCA | + |
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Preference number: 6 (lower is better) Translates to: PDLSWSSSPCVS*TLHHPPRLPVP Trigger: TGGTACGGGCAGCCTGGGAGGGTGGTGCAGTGTTCACGACACACAGGGGCTTGAAGACCAACTCAGGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081022.9 ENSMUST00000207465.2 ENSMUST00000208338.2 |
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| CDS GCA 72 bp | GGAAAACAGAGCTTTGTGCGCGGTCCCCGAGGTCACTaGTCCTTGCTGATCCTGGGAGGCCAGGCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKQSFVRGPRGH*SLLILGGQAVP Trigger: AGGAACAGCCTGGCCTCCCAGGATCAGCAAGGAGCAGTGACCTCGGGGACCGCGCACAAAGCTCTGTTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081022.9 ENSMUST00000207086.2 |
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| CDS CCA 72 bp | CGTTCAGCATGTGAGTCCTGCCTTGGAAGCAGATCCTaGGCTTCCTGTACAGACTGCTGGCCCTGTGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RSACESCLGSRS*ASCTDCWPCVS Trigger: CGACACACAGGGCCAGCAGTCTGTACAGGAAGCCCAGGATCTGCTTCCAAGGCAGGACTCACATGCTGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207809.2 |
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| CDS GCA 72 bp | CTTTCCGGAATGAATCTGCTGATGGTGAGCAAAGTGTaGAGTCTGCCTGAAGGCCCTCCTGCCCTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LSGMNLLMVSKV*SLPEGPPALLV Trigger: TACAAGAAGGGCAGGAGGGCCTTCAGGCAGACTGCACACTTTGCTCACCATCAGCAGATTCATTCCGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS CAA 72 bp | GCAGCTTCCTGTTTGCGGTTTATCTCCTGGAGGAAGTaGGTATCTCTGGAAAACAGAGCTTTGTGCGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: AASCLRFISWRK*VSLENRALCAV Trigger: GACCGCGCACAAAGCTCTGTTTTCCAGAGATACCAACTTCCTCCAGGAGATAAACCGCAAACAGGAAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081022.9 ENSMUST00000207086.2 |
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| CDS CAA 72 bp | GCTTTATGTCTAGTCCCTGTAGGGGCAGCTTCCTGTTaGCGGTTTATCTCCTGGAGGAAGTTGGTATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ALCLVPVGAASC*RFISWRKLVSL Trigger: CAGAGATACCAACTTCCTCCAGGAGATAAACCGCAAACAGGAAGCTGCCCCTACAGGGACTAGACATAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081022.9 ENSMUST00000207086.2 |
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| CDS TCA 72 bp | AGGATTCGATGTGGAAGGCAAAGAGTGGTGAGCAGGTaGCTTTCCGGAATGAATCTGCTGATGGTGAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RIRCGRQRVVSR*LSGMNLLMVSK Trigger: TTTGCTCACCATCAGCAGATTCATTCCGGAAAGTCACCTGCTCACCACTCTTTGCCTTCCACATCGAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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| CDS CCA 72 bp | ATGATGATGGCAGTGAGGATGGATTCCAGACGAATTTaGAGAAGAGATCCACAGGATTCGATGTGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: MMMAVRMDSRRI*RRDPQDSMWKA Trigger: TGCCTTCCACATCGAATCCTGTGGATCTCTTCTCCAAATTCGTCTGGAATCCATCCTCACTGCCATCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081022.9 |
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