Pregenerated sensors for ZFP27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062040Ensembl transcript IDs: ENSMUST00000053521.15, ENSMUST00000159920.2, ENSMUST00000161904.8, ENSMUST00000162592.8, ENSMUST00000172448.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCAAGTAGAAATGTCCTaGCCCATAATCCCATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PKAGITGTKCHTQACSVCQVEMS*PIIPFS Trigger: ACTGAATGGGATTATGGGGCAGGACATTTCTACTTG...ACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTCTGAGCAGTAATGTGTaGCACTGTCATGTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: DAISSQQVEMSCPIIPFSLSSNV*HCHVAF Trigger: AAATGCCACATGACAGTGTCACACATTACTGCTCAG...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| 3UTR-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATTCAGTGCCTTCTCTaGGATCTTTTTCTGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLCQIDAISSQQVEMSCPIQCLL*DLFLSS Trigger: ACTGCTCAGAAAAAGATCTCAGAGAAGGCACTGAAT...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACTGAGCAGTAATGTGTaGCACTGTCATGTGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: MRTLLLCQIDAISSQQVELSSNV*HCHVAF Trigger: AAATGCCACATGACAGTGTCACACATTACTGCTCAG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATTGCATCAACATGAGTTaGCACAATCTTTCTTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CLQQTSDRREDGPCHVHYCINMS*HNLSCE Trigger: TTCACAAGAAAGATTGTGTCAACTCATGTTGATGCA...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR GCA 72 bp | CAGCTTTCCCCAAAGGCTGGAATTACTGGCACGAAATaGCACACCCAGGCCTGTAGTGTATGTCTCTCAACA | + |
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Preference number: 3 (lower is better) Translates to: QLSPKAGITGTK*HTQACSVCLST Trigger: TGTTGAGAGACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTGGGGAAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCTCTCAACAGAAGGATCCACCAACAGGATTTTaGCATCAACATGAGTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LARNATPRPVVYVSQQKDPPTGF*HQHELT Trigger: TGTCAACTCATGTTGATGCAAAAATCCTGTTGGTGG...ATCCTTCTGTTGAGAGACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCTTTCTTGTGAAGAACTaGATGACAATGTTCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: QRLELLARNATPRPVVYVFLVKN*MTMFHC Trigger: ACAGTGGAACATTGTCATCAAGTTCTTCACAAGAAA...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR GCA 72 bp | ATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTaGCCCATAATCCCATTCAGTGCCTTCTCTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: IDAISSQQVEMS*PIIPFSAFSEI Trigger: GATCTCAGAGAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| 3UTR TCA 72 bp | ACACCCACAGGTCTATTAATGTTTGCAGCAAACAAGTaGCAGAAGAGAAGATGGTCCCTGTCATGTACATTA | + |
|
Preference number: 3 (lower is better) Translates to: TPTGLLMFAANK*QKRRWSLSCTL Trigger: TAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACATTAATAGACCTGTGGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| 3UTR TCA 72 bp | ATACTCCACCAACAGGATTTTTGCATCAACATGAGTTaGCACAATCTTTCTTGTGAAGAACTTGATGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: ILHQQDFCINMS*HNLSCEELDDN Trigger: ATTGTCATCAAGTTCTTCACAAGAAAGATTGTGTCAACTCATGTTGATGCAAAAATCCTGTTGGTGGAGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCAATTGGACCTATCGGTaGAGGCCTTCCCGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: QRLELLARNATPRPVVYVNWTYR*RPSRTR Trigger: CCGAGTGCGGGAAGGCCTTCACCGATAGGTCCAATT...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | CTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCTCTCAACAGAAGGATGACTTCTCCCCCGTGTaGATTCTTCGGTGCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LARNATPRPVVYVSQQKDDFSPV*ILRCTV Trigger: CACCGTGCACCGAAGAATCCACACGGGGGAGAAGTC...ATCCTTCTGTTGAGAGACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTTCCCCAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTGTGCTTGCTGAGATTTaGCCTGCCGCTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSPKAGITGTKCHTQACVLAEI*PAAKGF Trigger: AAAGCCTTTAGCGGCAGGTCAAATCTCAGCAAGCAC...ACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTGGGGAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTTCAGGTGGGTCCCAGTaGCGTGGCCTCTTGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSSGGSQ*RGLLGG Trigger: CCCTCCCAAGAGGCCACGTCACTGGGACCCACCTGA...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCGGATCCTCCGGTGCCTaGACAGAGAAGATACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRLELLARNATPRPVVYVGSSGA*TEKILG Trigger: TCCAAGTATCTTCTCTGTTCAGGCACCGGAGGATCC...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCTCTCAACAGAAGGATCCTGTATGGATCTTCTaGTGTATCCTGAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LARNATPRPVVYVSQQKDPVWIF*CILRSE Trigger: CTCAGACCTCAGGATACATCAGAAGATCCATACAGG...ATCCTTCTGTTGAGAGACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTTCCCCAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTGTGTATACTGAGGTGTaGTTTCTGGGTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSPKAGITGTKCHTQACVYTEV*FLGKGF Trigger: AAAGCCTTTACCCAGAAATCACACCTCAGTATACAC...ACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTGGGGAAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCTCCAAGTGTGCCCTTTaGACGAAGGCTAGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFSKCAL*TKASPH Trigger: GTGCGGGCTAGCCTTCGTGCAAAGGGCACACTTGGA...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGACTTCTCCCCCGTGTaGATTCTTCGGTGCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFDFSPV*ILRCTV Trigger: CACCGTGCACCGAAGAATCCACACGGGGGAGAAGTC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTAATTGGACCTATCGGTaGAGGCCTTCCCGCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSNWTYR*RPSRTR Trigger: CCGAGTGCGGGAAGGCCTTCACCGATAGGTCCAATT...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTTCCAAGTGTGCCCTTTaGACGAAGGCTAGCCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSSKCAL*TKASPH Trigger: GTGCGGGCTAGCCTTCGTGCAAAGGGCACACTTGGA...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGACTTCTCCCCCGTGTaGATTCTTCGGTGCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSDFSPV*ILRCTV Trigger: CACCGTGCACCGAAGAATCCACACGGGGGAGAAGTC...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCGTGTACTCTGAGCTGTaGCTTCTGGGTAAAAATCTT | + |
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Preference number: 4 (lower is better) Translates to: QRLELLARNATPRPVVYVVYSEL*LLGKNL Trigger: AAGATTTTTACCCAGAAGTCACAGCTCAGAGTACAC...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGGATCCTCCGGTGCCTaGACAGAGAAGATACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFGSSGA*TEKILG Trigger: TCCAAGTATCTTCTCTGTTCAGGCACCGGAGGATCC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCTGGTGGACCAGGAGTTaGGACTTGGAAAGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFWWTRS*DLERKA Trigger: AGCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCA...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTCCAGTATGGATGCGCTaGTGGGTGATGAAGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSPVWMR*WVMKLD Trigger: GTCCAACTTCATCACCCATCAGCGCATCCATACTGG...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGCAGGATCTAGATGCTaGCACTCCTCTCTGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFAGSRC*HSSLLK Trigger: TTTCAGCAGAGAGGAGTGGCAGCATCTAGATCCTGC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCTGGAAAGGAAGGCTTTaGCACAGCCGTCACACGCGT | + |
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Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPWKGRL*HSRHTR Trigger: ACGCGTGTGACGGCTGTGGCAAAGCCTTCCTTTCCA...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCCCCGTGTGGATCTTCTaGTGCATCCTCAGTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPPVWIF*CILSVD Trigger: GTCCACACTGAGGATGCACCAGAAGATCCACACGGG...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTTGGTGGACCAGGAGTTaGGACTTGGAAAGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSWWTRS*DLERKA Trigger: AGCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCA...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCATGTGTGAGGAACTCTaGCGTCTGAGAACATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFMCEEL*RLRTCL Trigger: AAGGCATGTTCTCAGACGTCAGAGTTCCTCACACAT...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGGATCCTCCGGTGCCTaGACAGAGAAGATACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPGSSGA*TEKILG Trigger: TCCAAGTATCTTCTCTGTTCAGGCACCGGAGGATCC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGTGTGTAATCAGCTCTaGCTTCTGCCTGAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFVCNQL*LLPEGL Trigger: AAGTCCTTCAGGCAGAAGTCAGAGCTGATTACACAC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCAGGATCTAGATGCTaGCACTCCTCTCTGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSAGSRC*HSSLLK Trigger: TTTCAGCAGAGAGGAGTGGCAGCATCTAGATCCTGC...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | CATGTTGGTCTTTTTACAAAGATAGCACTGGTAGCTTATAAAGTCTGTGACATGTCCAAGTGTGCCCTTTaGACGAAGGCTAGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: HVGLFTKIALVAYKVCDMSKCAL*TKASPH Trigger: GTGCGGGCTAGCCTTCGTGCAAAGGGCACACTTGGA...CATGTCACAGACTTTATAAGCTACCAGTGCTATCTTTGTAAAAAGACCAACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATTGGTGGACCAGGAGTTaGGACTTGGAAAGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CLQQTSDRREDGPCHVHYWWTRS*DLERKA Trigger: AGCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCA...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCCACACTCCGCGCAGATaGACGATTTCTCTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFHTPRR*TISLSF Trigger: AAATGAGAGAGAAATCGTCCATCTGCGCGGAGTGTG...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTATGTGTGAGGAACTCTaGCGTCTGAGAACATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSMCEEL*RLRTCL Trigger: AAGGCATGTTCTCAGACGTCAGAGTTCCTCACACAT...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTCCTGTATGGATCTTCTaGTGTATCCTGAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSPVWIF*CILRSE Trigger: CTCAGACCTCAGGATACATCAGAAGATCCATACAGG...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAAATTGGACCTATCGGTaGAGGCCTTCCCGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVENWTYR*RPSRTR Trigger: CCGAGTGCGGGAAGGCCTTCACCGATAGGTCCAATT...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR GCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGCAGGATCTAGATGCTaGCACTCCTCTCTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPAGSRC*HSSLLK Trigger: TTTCAGCAGAGAGGAGTGGCAGCATCTAGATCCTGC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATGCAGGATCTAGATGCTaGCACTCCTCTCTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLQQTSDRREDGPCHVHYAGSRC*HSSLLK Trigger: TTTCAGCAGAGAGGAGTGGCAGCATCTAGATCCTGC...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAATCCAAGTGTGCCCTTTaGACGAAGGCTAGCCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVESKCAL*TKASPH Trigger: GTGCGGGCTAGCCTTCGTGCAAAGGGCACACTTGGA...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCTTGTGCACGTGGAGTTaGGACTTGGAAGTGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFLCTWS*DLEVKN Trigger: ATTCTTCACTTCCAAGTCGCAACTCCACGTGCACAA...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCCCGGTATGTATCCTCTaGTGTGTAACCAGGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPPVCIL*CVTRSD Trigger: GTCAGACCTGGTTACACACCAGAGGATACATACCGG...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| 3UTR CAA 72 bp | ACCCAGGCCTGTAGTGTATGTCTCTCAACAGAAGGATaGGATGTGCCAGTTATGTTAGATCTGACCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQACSVCLSTEG*DVPVMLDLTKN Trigger: ATTCTTGGTCAGATCTAACATAACTGGCACATCCAATCCTTCTGTTGAGAGACATACACTACAGGCCTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATATGTGTGAGGAACTCTaGCGTCTGAGAACATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLQQTSDRREDGPCHVHYMCEEL*RLRTCL Trigger: AAGGCATGTTCTCAGACGTCAGAGTTCCTCACACAT...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCCCTGTATGGATCTTCTaGTGTATCCTGAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPPVWIF*CILRSE Trigger: CTCAGACCTCAGGATACATCAGAAGATCCATACAGG...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGATTTCTCTCTCATTTaGACTTTCTTACGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFDFSLI*TFLRGR Trigger: CCTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGTGTATACTGAGGTGTaGTTTCTGGGTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFVYTEV*FLGKGF Trigger: AAAGCCTTTACCCAGAAATCACACCTCAGTATACAC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGTGTGTAATCAGCTCTaGCTTCTGCCTGAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPVCNQL*LLPEGL Trigger: AAGTCCTTCAGGCAGAAGTCAGAGCTGATTACACAC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCCACACTCCGCGCAGATaGACGATTTCTCTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPHTPRR*TISLSF Trigger: AAATGAGAGAGAAATCGTCCATCTGCGCGGAGTGTG...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCAGGGAGAACAATGTATaGGTTCACATGAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFRENNV*VHMNHL Trigger: AAGGTGATTCATGTGAACTCATACATTGTTCTCCCT...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCAGGACTTTTCCACATTaGTTATGGTCCGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFRTFPH*LWSGNF Trigger: GAAATTACCGGACCATAATCAATGTGGAAAAGTCCT...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGGATCCTCCGGTGCCTaGACAGAGAAGATACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEGSSGA*TEKILG Trigger: TCCAAGTATCTTCTCTGTTCAGGCACCGGAGGATCC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTTCTTCTGATGTATCCTaGGGTCTGAGTTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSSSDVS*GLSCKR Trigger: TCTCTTACAACTCAGACCTCAGGATACATCAGAAGA...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGTGTATACTGAGGTGTaGTTTCTGGGTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSVYTEV*FLGKGF Trigger: AAAGCCTTTACCCAGAAATCACACCTCAGTATACAC...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACCAGTATGGATGCGCTaGTGGGTGATGAAGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEPVWMR*WVMKLD Trigger: GTCCAACTTCATCACCCATCAGCGCATCCATACTGG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTAGGGAGAACAATGTATaGGTTCACATGAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSRENNV*VHMNHL Trigger: AAGGTGATTCATGTGAACTCATACATTGTTCTCCCT...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGTGTACTCTGAGCTGTaGCTTCTGGGTAAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPVYSEL*LLGKNL Trigger: AAGATTTTTACCCAGAAGTCACAGCTCAGAGTACAC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCTCTTCTGATGTATCCTaGGGTCTGAGTTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPSSDVS*GLSCKR Trigger: TCTCTTACAACTCAGACCTCAGGATACATCAGAAGA...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGATTTCTCTCTCATTTaGACTTTCTTACGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPDFSLI*TFLRGR Trigger: CCTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCGTGTATACTGAGGTGTaGTTTCTGGGTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPVYTEV*FLGKGF Trigger: AAAGCCTTTACCCAGAAATCACACCTCAGTATACAC...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGTGCTTGCTGAGATTTaGCCTGCCGCTAAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEVLAEI*PAAKGF Trigger: AAAGCCTTTAGCGGCAGGTCAAATCTCAGCAAGCAC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCAACAGAGAAGATACTTaGAAAAAGGACTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFNREDT*KKDFPQ Trigger: CTGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTT...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACCGGTATGTATCCTCTaGTGTGTAACCAGGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEPVCIL*CVTRSD Trigger: GTCAGACCTGGTTACACACCAGAGGATACATACCGG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCAGGGAGAACAATGTATaGGTTCACATGAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPRENNV*VHMNHL Trigger: AAGGTGATTCATGTGAACTCATACATTGTTCTCCCT...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATAGGGAGAACAATGTATaGGTTCACATGAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLQQTSDRREDGPCHVHYRENNV*VHMNHL Trigger: AAGGTGATTCATGTGAACTCATACATTGTTCTCCCT...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCAGGACTTTTCCACATTaGTTATGGTCCGGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPRTFPH*LWSGNF Trigger: GAAATTACCGGACCATAATCAATGTGGAAAAGTCCT...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACCTGTATGGATCTTCTaGTGTATCCTGAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEPVWIF*CILRSE Trigger: CTCAGACCTCAGGATACATCAGAAGATCCATACAGG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGTGTGTAATCAGCTCTaGCTTCTGCCTGAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEVCNQL*LLPEGL Trigger: AAGTCCTTCAGGCAGAAGTCAGAGCTGATTACACAC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTAACAGAGAAGATACTTaGAAAAAGGACTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DAISSQQVEMSCPIIPFSNREDT*KKDFPQ Trigger: CTGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTT...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACACACTCCGCGCAGATaGACGATTTCTCTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEHTPRR*TISLSF Trigger: AAATGAGAGAGAAATCGTCCATCTGCGCGGAGTGTG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAATTGTGCACGTGGAGTTaGGACTTGGAAGTGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVELCTWS*DLEVKN Trigger: ATTCTTCACTTCCAAGTCGCAACTCCACGTGCACAA...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCAACAGAGAAGATACTTaGAAAAAGGACTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCQIDAISSQQVEMSCPNREDT*KKDFPQ Trigger: CTGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTT...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGTGTACTCTGAGCTGTaGCTTCTGGGTAAAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEVYSEL*LLGKNL Trigger: AAGATTTTTACCCAGAAGTCACAGCTCAGAGTACAC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAATCTTCTGATGTATCCTaGGGTCTGAGTTGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVESSDVS*GLSCKR Trigger: TCTCTTACAACTCAGACCTCAGGATACATCAGAAGA...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGATTTCTCTCTCATTTaGACTTTCTTACGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVEDFSLI*TFLRGR Trigger: CCTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAAACAGAGAAGATACTTaGAAAAAGGACTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MRTLLLCQIDAISSQQVENREDT*KKDFPQ Trigger: CTGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTT...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
||
| CDS TCA 90 bp | GCTGAAGGGTTTCGCACGGTCGAGAGATACACAGGGCCTCACTCTTaGGTGAATTCGCTGGTGGACCAGGAGTTGGGACTTGGAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AEGFRTVERYTGPHS*VNSLVDQELGLGKE Trigger: TTCCTTTCCAAGTCCCAACTCCTGGTCCACCAGCGAATTCACTCAAGAGTGAGGCCCTGTGTATCTCTCGACCGTGCGAAACCCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS TCA 90 bp | CTCTCATTTGAACTTTCTTACGCGGAAGGAGGTTGGGAGCGCTGCTaGAGGGTTTCGCACGGTCGAGAGATACACAGGGCCTCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LSFELSYAEGGWERC*RVSHGREIHRASLL Trigger: CAAGAGTGAGGCCCTGTGTATCTCTCGACCGTGCGAAACCCTTCAGCAGCGCTCCCAACCTCCTTCCGCGTAAGAAAGTTCAAATGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCCTGGTGGACCAGGAGTaGGGACTTGGAAAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: QRLELLARNATPRPVVYVLVDQE*GLGKEG Trigger: GCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCAG...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCTTGGAAAGGAAGGCTTaGCCACAGCCGTCACACGCG | + |
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Preference number: 5 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFLERKA*PQPSHA Trigger: CGCGTGTGACGGCTGTGGCAAAGCCTTCCTTTCCAA...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCCTGGTGGACCAGGAGTaGGGACTTGGAAAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFLVDQE*GLGKEG Trigger: GCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCAG...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTCTGGTGGACCAGGAGTaGGGACTTGGAAAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: DAISSQQVEMSCPIIPFSLVDQE*GLGKEG Trigger: GCCTTCCTTTCCAAGTCCCAACTCCTGGTCCACCAG...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCTTTTGTGTGAAGGCTTaGCCACAGTCGACGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFFCVKA*PQSTQP Trigger: TGGCTGCGTCGACTGTGGCAAAGCCTTCACACAAAA...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCTTGGAAAGGAAGGCTTaGCCACAGCCGTCACACGCG | + |
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Preference number: 5 (lower is better) Translates to: LLCQIDAISSQQVEMSCPLERKA*PQPSHA Trigger: CGCGTGTGACGGCTGTGGCAAAGCCTTCCTTTCCAA...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTGGAATTACTGGCACGAAATGCCACACCCAGGCCTGTAGTGTATGTCGAACAGAGAAGATACTaGGAAAAAGGACTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: QRLELLARNATPRPVVYVEQRRY*EKGLST Trigger: TGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTTC...GACATACACTACAGGCCTGGGTGTGGCATTTCGTGCCAGTAATTCCAGCCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCACCAGGAGTTGGGACTaGGAAAGGAAGGCTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLCQIDAISSQQVEMSCPTRSWD*ERKALP Trigger: TGGCAAAGCCTTCCTTTCCAAGTCCCAACTCCTGGT...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | TGTTTGCAGCAAACAAGTGACAGAAGAGAAGATGGTCCCTGTCATGTACATTATACCAGGAGTTGGGACTaGGAAAGGAAGGCTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CLQQTSDRREDGPCHVHYTRSWD*ERKALP Trigger: TGGCAAAGCCTTCCTTTCCAAGTCCCAACTCCTGGT...ATAATGTACATGACAGGGACCATCTTCTCTTCTGTCACTTGTTTGCTGCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162592.8 |
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| CDS TCA 90 bp | ACTCTCTGCACCCAGCGTCTTCGTGATGAAAACCATATCACTCGCTaGTTTATGTCCTATTTGCTGGTAGGTCTTTTTCTGGTCACCAAT | + |
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Preference number: 5 (lower is better) Translates to: TLCTQRLRDENHITR*FMSYLLVGLFLVTN Trigger: ATTGGTGACCAGAAAAAGACCTACCAGCAAATAGGACATAAATCAGCGAGTGATATGGTTTTCATCACGAAGACGCTGGGTGCAGAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS-3UTR CAA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAATTGGAAAGGAAGGCTTaGCCACAGCCGTCACACGCG | + |
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Preference number: 5 (lower is better) Translates to: MRTLLLCQIDAISSQQVELERKA*PQPSHA Trigger: CGCGTGTGACGGCTGTGGCAAAGCCTTCCTTTCCAA...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCCGATTTCTCTCTCATTaGAACTTTCTTACGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFRFLSH*NFLTRK Trigger: CTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATCG...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGCCTTCGAACAGAGAAGATACTaGGAAAAAGGACTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: ISSQQVEMSCPIIPFSAFEQRRY*EKGLST Trigger: TGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTTC...GAAGGCACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAACCAGGAGTTGGGACTaGGAAAGGAAGGCTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: MRTLLLCQIDAISSQQVETRSWD*ERKALP Trigger: TGGCAAAGCCTTCCTTTCCAAGTCCCAACTCCTGGT...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTCGATTTCTCTCTCATTaGAACTTTCTTACGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DAISSQQVEMSCPIIPFSRFLSH*NFLTRK Trigger: CTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATCG...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS TCA 90 bp | TATTCAGTAATCCTTTTAGTTCTCTTCAGCCCATTACTTTCATCATaGGTCTGTAAATCTGAACTATGCTTCGGCTCATCCTCAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: YSVILLVLFSPLLSS*VCKSELCFGSSSGG Trigger: CCCACCTGAGGATGAGCCGAAGCATAGTTCAGATTTACAGACTCATGATGAAAGTAATGGGCTGAAGAGAACTAAAAGGATTACTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS-3UTR CAA 90 bp | GATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCATAATCCCATTCAGTGAACAGAGAAGATACTaGGAAAAAGGACTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: DAISSQQVEMSCPIIPFSEQRRY*EKGLST Trigger: TGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTTC...ACTGAATGGGATTATGGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | CTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAATGTCCTGCCCCCGATTTCTCTCTCATTaGAACTTTCTTACGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLCQIDAISSQQVEMSCPRFLSH*NFLTRK Trigger: CTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATCG...GGGGCAGGACATTTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAACGATTTCTCTCTCATTaGAACTTTCTTACGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MRTLLLCQIDAISSQQVERFLSH*NFLTRK Trigger: CTTCCGCGTAAGAAAGTTCAAATGAGAGAGAAATCG...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS-3UTR CAA 90 bp | ATGAGAACGCTTCTATTGTGTCAAATTGATGCAATTTCTTCTCAGCAAGTAGAAGAACAGAGAAGATACTaGGAAAAAGGACTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: MRTLLLCQIDAISSQQVEEQRRY*EKGLST Trigger: TGTGGAAAGTCCTTTTTCCAAGTATCTTCTCTGTTC...TTCTACTTGCTGAGAAGAAATTGCATCAATTTGACACAATAGAAGCGTTCTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 |
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| CDS CCA 72 bp | GCTCATCCTCAGGTGGGTCCCAGTGACGTGGCCTCTTaGGAGGGAGAACAATGTATGAGTTCACATGAATCA | + |
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Preference number: 6 (lower is better) Translates to: AHPQVGPSDVAS*EGEQCMSSHES Trigger: TGATTCATGTGAACTCATACATTGTTCTCCCTCCCAAGAGGCCACGTCACTGGGACCCACCTGAGGATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS TCA 72 bp | TTCTCCTGTAGGAGACGTCACGTGTACTCTGAGCTGTaGCTTCTGGGTAAAAATCTTTCCAAATTCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: FSCRRRHVYSEL*LLGKNLSKFST Trigger: TGTGCTGAATTTGGAAAGATTTTTACCCAGAAGTCACAGCTCAGAGTACACGTGACGTCTCCTACAGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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| CDS TCA 72 bp | ATCCTTTTAGTTCTCTTCAGCCCATTACTTTCATCATaGGTCTGTAAATCTGAACTATGCTTCGGCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ILLVLFSPLLSS*VCKSELCFGSS Trigger: GGATGAGCCGAAGCATAGTTCAGATTTACAGACTCATGATGAAAGTAATGGGCTGAAGAGAACTAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053521.15 ENSMUST00000159920.2 ENSMUST00000161904.8 ENSMUST00000162592.8 ENSMUST00000172448.2 |
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