Pregenerated sensors for ZFP268 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078502Ensembl transcript IDs: ENSMUST00000097794.4, ENSMUST00000105739.8, ENSMUST00000119718.8
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAATGGTTGACCAGATCACAAGAGACTCATACTCAGTTGTTATCCTATAATGTGTGCAATACTATCTTCTaGCTTCCCCACTTTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: EWLTRSQETHTQLLSYNVCNTIF*LPHFSS Trigger: TGAAGAAAAGTGGGGAAGTCAGAAGATAGTATTGCA...CACATTATAGGATAACAACTGAGTATGAGTCTCTTGTGATCTGGTCAACCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGTGTTGTCAAGAATACACCGTGAATAAAACATATGCCACATTTTTCCCACTTAGATGTTTTCTCTaGCCTGAAATGAAGTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKCCQEYTVNKTYATFFPLRCFL*PEMKSK Trigger: CTTTGACTTCATTTCAGGTCAGAGAAAACATCTAAG...TGGGAAAAATGTGGCATATGTTTTATTCACGGTGTATTCTTGACAACACTTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| 3UTR-3UTR TCA 90 bp | TCACAAGAGACTCATACTCAGTTGTTATCCTATAATGTGAAACAAGCAATTGAGTGCAATACTATCTTCTaGCTTCCCCACTTTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SQETHTQLLSYNVKQAIECNTIF*LPHFSS Trigger: TGAAGAAAAGTGGGGAAGTCAGAAGATAGTATTGCA...CTCAATTGCTTGTTTCACATTATAGGATAACAACTGAGTATGAGTCTCTTGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCTTTCTCAGTGTGTTATGCAATACTATCTTCTGACTTCCCCACTTTTCCTTAGATGTTTTCTCTaGCCTGAAATGAAGTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LFLSQCVMQYYLLTSPLFLRCFL*PEMKSK Trigger: CTTTGACTTCATTTCAGGTCAGAGAAAACATCTAAG...GAAAAGTGGGGAAGTCAGAAGATAGTATTGCATAACACACTGAGAAAGAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| 3UTR-3UTR CAA 90 bp | TCACAAGAGACTCATACTCAGTTGTTATCCTATAATGTGAAACAAGCAATTGAGATAGGAAAGGAATGGTaGACCAGATCACAAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SQETHTQLLSYNVKQAIEIGKEW*TRSQET Trigger: AGTCTCTTGTGATCTGGTCAACCATTCCTTTCCTAT...CTCAATTGCTTGTTTCACATTATAGGATAACAACTGAGTATGAGTCTCTTGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| 3UTR CCA 72 bp | AAGCATACTTATAGGATAAAGAATATGCTGTCTGGGTaGCTCAGTTTGCCAGATACTCTTTTAAGTATAATT | + |
|
Preference number: 3 (lower is better) Translates to: KHTYRIKNMLSG*LSLPDTLLSII Trigger: AATTATACTTAAAAGAGTATCTGGCAAACTGAGCCACCCAGACAGCATATTCTTTATCCTATAAGTATGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS-3UTR TCA 90 bp | CTCAAGTGTTGTCAAGAATACACCGTGAATAAAACATATGCCACATTTTTCCCAACAAGGCCACATCCTTaGAGGTTAACAGACCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKCCQEYTVNKTYATFFPTRPHP*RLTDPV Trigger: CACAGGGTCTGTTAACCTTCAAGGATGTGGCCTTGT...TGGGAAAAATGTGGCATATGTTTTATTCACGGTGTATTCTTGACAACACTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS-3UTR TCA 90 bp | CCCACTTTTCTTCATGTTGTAACATTTGAGGGTGAACAAGTAAAAGGTGTCATGTCCTCTGAGCAAAACTaGGACATTCCCATTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFLHVVTFEGEQVKGVMSSEQN*DIPIPP Trigger: TGGAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGA...CATGACACCTTTTACTTGTTCACCCTCAAATGTTACAACATGAAGAAAAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS-3UTR TCA 90 bp | TTTCTTCATGTTGTAACATTTGAGGGTGAACAAGTAAAAGGTGTCATGAAAGGCTCCTCTGAGCAAAACTaGGACATTCCCATTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FLHVVTFEGEQVKGVMKGSSEQN*DIPIPP Trigger: TGGAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGA...GCCTTTCATGACACCTTTTACTTGTTCACCCTCAAATGTTACAACATGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS-3UTR TCA 90 bp | TTATTTCTTTCTCAGTGTGTTATGCAATACTATCTTCTGACTTCCCCACTTTTCTTGTACAGTGTCCTCTaGGCAAAACTGAGACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLSQCVMQYYLLTSPLFLYSVL*AKLRHS Trigger: GGAATGTCTCAGTTTTGCTCAGAGGACACTGTACAA...GAAAAGTGGGGAAGTCAGAAGATAGTATTGCATAACACACTGAGAAAGAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS-3UTR TCA 90 bp | TTTCTTCATGTTGTAACATTTGAGGGTGAACAAGTAAAAGGTGTCATGAAAGGCTGCATGTGGATTCCTTaGTTGAGACTAATGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLHVVTFEGEQVKGVMKGCMWIP*LRLMVE Trigger: TTCTACCATTAGTCTCAATCAAGGAATCCACATGCA...GCCTTTCATGACACCTTTTACTTGTTCACCCTCAAATGTTACAACATGAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS GCA 90 bp | TGTACTGGCTGTCTTGATCCAAGACCTTCCTATACTTTCCACATATaGAATGATTTTCCACGAACAAAAGATTGTTGTAATTCTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: CTGCLDPRPSYTFHI*NDFPRTKDCCNSPT Trigger: TGTTGGAGAATTACAACAATCTTTTGTTCGTGGAAAATCATTGCATATGTGGAAAGTATAGGAAGGTCTTGGATCAAGACAGCCAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097794.4 ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS CAA 90 bp | TTCAAGAATCACCTTGCTAAGCTTGTCCCATTTAGAAGACTTCTCTaGAATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: FKNHLAKLVPFRRLL*NIHVFMDNVLAVLI Trigger: GATCAAGACAGCCAGTACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTAGCAAGGTGATTCTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097794.4 ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS TCA 72 bp | ATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTaGTCCAAGACCTTCCTATACTTTCCACATATGCAA | + |
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Preference number: 6 (lower is better) Translates to: IFMCSWTMYWLS*SKTFLYFPHMQ Trigger: TTGCATATGTGGAAAGTATAGGAAGGTCTTGGATCAAGACAGCCAGTACATTGTCCATGAACACATGAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097794.4 ENSMUST00000105739.8 ENSMUST00000119718.8 |
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| CDS GCA 72 bp | TGTCTTGATCCAAGACCTTCCTATACTTTCCACATATaGAATGATTTTCCACGAACAAAAGATTGTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: CLDPRPSYTFHI*NDFPRTKDCCN Trigger: ATTACAACAATCTTTTGTTCGTGGAAAATCATTGCATATGTGGAAAGTATAGGAAGGTCTTGGATCAAGACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097794.4 ENSMUST00000105739.8 ENSMUST00000119718.8 |
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